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Search of human proteins with 10092677
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|10092677 pyridoxal phosphatase [Homo sapiens]
(296 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|10092677 pyridoxal phosphatase [Homo sapiens] 592 e-169
gi|108796653 phosphoglycolate phosphatase [Homo sapiens] 253 1e-67
gi|33636766 phospholysine phosphohistidine inorganic pyrophospha... 83 3e-16
gi|14149777 haloacid dehalogenase-like hydrolase domain containi... 75 9e-14
gi|23308749 N-acetylneuraminic acid phosphatase [Homo sapiens] 41 0.001
gi|94721336 RUN and FYVE domain-containing 1 isoform a [Homo sap... 35 0.10
gi|194018732 hypothetical protein LOC100130958 [Homo sapiens] 33 0.23
gi|14149716 protein phosphatase 1, regulatory subunit 12C [Homo ... 32 0.51
gi|239751535 PREDICTED: hypothetical protein [Homo sapiens] 31 1.1
gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo ... 31 1.1
gi|14149740 oxysterol-binding protein-like protein 5 isoform a [... 31 1.5
gi|13325057 solute carrier family 27 (fatty acid transporter), m... 31 1.5
gi|221136766 oxysterol-binding protein-like protein 5 isoform b ... 31 1.5
gi|22035609 oxysterol-binding protein-like protein 5 isoform b [... 31 1.5
gi|119508426 alpha 3 type IX collagen [Homo sapiens] 30 2.5
gi|30795190 Williams-Beuren syndrome chromosome region 27 [Homo ... 30 2.5
gi|22748701 zinc finger protein 641 [Homo sapiens] 30 2.5
gi|157388929 epsin 3 [Homo sapiens] 30 3.3
gi|32171221 GRP1 (general receptor for phosphoinositides 1)-asso... 29 4.3
gi|31542667 transmembrane protein 40 [Homo sapiens] 29 4.3
gi|122937514 unc-13 homolog C [Homo sapiens] 29 5.7
gi|14861834 cat eye syndrome chromosome region, candidate 5 isof... 29 5.7
gi|21914862 cat eye syndrome chromosome region, candidate 5 isof... 29 5.7
gi|8922122 elaC homolog 1 [Homo sapiens] 28 7.4
gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens] 28 7.4
gi|119829187 alpha 1 type XVII collagen [Homo sapiens] 28 7.4
gi|239756827 PREDICTED: hypothetical protein [Homo sapiens] 28 9.7
gi|239755509 PREDICTED: hypothetical protein [Homo sapiens] 28 9.7
gi|239750019 PREDICTED: hypothetical protein [Homo sapiens] 28 9.7
gi|239744332 PREDICTED: hypothetical protein XP_002343119 [Homo ... 28 9.7
>gi|10092677 pyridoxal phosphatase [Homo sapiens]
Length = 296
Score = 592 bits (1525), Expect = e-169
Identities = 296/296 (100%), Positives = 296/296 (100%)
Query: 1 MARCERLRGAALRDVLGRAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNN 60
MARCERLRGAALRDVLGRAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNN
Sbjct: 1 MARCERLRGAALRDVLGRAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNN 60
Query: 61 SRRARPELALRFARLGFGGLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRA 120
SRRARPELALRFARLGFGGLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRA
Sbjct: 61 SRRARPELALRFARLGFGGLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRA 120
Query: 121 ELRAAGLRLAGDPSAGDGAAPRVRAVLVGYDEHFSFAKLREACAHLRDPECLLVATDRDP 180
ELRAAGLRLAGDPSAGDGAAPRVRAVLVGYDEHFSFAKLREACAHLRDPECLLVATDRDP
Sbjct: 121 ELRAAGLRLAGDPSAGDGAAPRVRAVLVGYDEHFSFAKLREACAHLRDPECLLVATDRDP 180
Query: 181 WHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDRL 240
WHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDRL
Sbjct: 181 WHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDRL 240
Query: 241 ETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLTEGLED 296
ETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLTEGLED
Sbjct: 241 ETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDLVPHYYVESIADLTEGLED 296
>gi|108796653 phosphoglycolate phosphatase [Homo sapiens]
Length = 321
Score = 253 bits (647), Expect = 1e-67
Identities = 146/312 (46%), Positives = 189/312 (60%), Gaps = 20/312 (6%)
Query: 2 ARCERLRGAALRDVLGRAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNS 61
ARC RL + +L +LFDCDGVLW GE AVPGAPE L L GK F++NNS
Sbjct: 11 ARCVRLSAERAQALLADVDTLLFDCDGVLWRGETAVPGAPEALRALRARGKRLGFITNNS 70
Query: 62 RRARPELALRFARLGFGGLRAE----QLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEG 117
+ R A + RLGFGG ++F +A C A LRQRL G P AP A +VLG
Sbjct: 71 SKTRAAYAEKLRRLGFGGPAGPGASLEVFGTAYCTALYLRQRLAGAP-APKA-YVLGSPA 128
Query: 118 LRAELRAAGLRLAG---DPSAGDGAA--------PRVRAVLVGYDEHFSFAKLREACAHL 166
L AEL A G+ G +P G+G P VRAV+VG+D HFS+ KL +A +L
Sbjct: 129 LAAELEAVGVASVGVGPEPLQGEGPGDWLHAPLEPDVRAVVVGFDPHFSYMKLTKALRYL 188
Query: 167 RDPECLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENF 226
+ P CLLV T+ D PL +G GTG L AVE A+ RQA ++GKPS ++F+C+++ +
Sbjct: 189 QQPGCLLVGTNMDNRLPLENGRFIAGTGCLVRAVEMAAQRQADIIGKPSRFIFDCVSQEY 248
Query: 227 SIDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEA---QAYLAAGQHDLVPHYY 283
I+P RT+MVGDRL+TDIL G CG+ T+LTLTGVS L + Q + +VP +Y
Sbjct: 249 GINPERTVMVGDRLDTDILLGATCGLKTILTLTGVSTLGDVKNNQESDCVSKKKMVPDFY 308
Query: 284 VESIADLTEGLE 295
V+SIADL L+
Sbjct: 309 VDSIADLLPALQ 320
>gi|33636766 phospholysine phosphohistidine inorganic pyrophosphate
phosphatase [Homo sapiens]
Length = 270
Score = 83.2 bits (204), Expect = 3e-16
Identities = 71/253 (28%), Positives = 120/253 (47%), Gaps = 26/253 (10%)
Query: 16 LGRAQGVLFDCDGVLWN----GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALR 71
L +GVL D GVL++ G A+ G+ E + RL R+ F +N S+++R EL +
Sbjct: 8 LAGVRGVLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESQKSRAELVGQ 67
Query: 72 FARLGFGGLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRAELRAAGLRLAG 131
RLGF + +++ + A A ++L++R P ++L +G+R+E
Sbjct: 68 LQRLGFD-ISEQEVTAPAPAACQILKERGLRP-------YLLIHDGVRSEFDQI------ 113
Query: 132 DPSAGDGAAPRVRAVLVGYDEHFSFAKLREACAHLRDPEC-LLVATDRDPWHPLSDGSRT 190
D + P V+ E FS+ + A L + E +L++ R ++ + G
Sbjct: 114 -----DTSNPNC-VVIADAGESFSYQNMNNAFQVLMELEKPVLISLGRGRYYKETSGLML 167
Query: 191 PGTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRC 250
G A+E A G +A VVGKPSP F+ + ++ + +M+GD + D+ RC
Sbjct: 168 D-VGPYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGAQRC 226
Query: 251 GMTTVLTLTGVSR 263
GM + TG R
Sbjct: 227 GMRALQVRTGKFR 239
>gi|14149777 haloacid dehalogenase-like hydrolase domain containing
2 [Homo sapiens]
Length = 259
Score = 74.7 bits (182), Expect = 9e-14
Identities = 67/249 (26%), Positives = 108/249 (43%), Gaps = 22/249 (8%)
Query: 20 QGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFGG 79
+ VL D G L + AVPGA E L+RL A FV+N ++ ++ +L R +L F
Sbjct: 8 KAVLVDLSGTLHIEDAAVPGAQEALKRLRGASVIIRFVTNTTKESKQDLLERLRKLEFD- 66
Query: 80 LRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRAELRAAGLRLAGDPSAGDGA 139
+ +++F+S A LL ++ P +L + + + G++ + + G
Sbjct: 67 ISEDEIFTSLTAARSLLERKQVRP-------MLLVDDRALPDFK--GIQTSDPNAVVMGL 117
Query: 140 APRVRAVLVGYDEHFSFAKLREACAHLRDPECLLVATDRDPWHPLSDGSRTPGTGSLAAA 199
AP EHF + L +A L D L+A + ++ DG G G A
Sbjct: 118 AP----------EHFHYQILNQAFRLLLDG-APLIAIHKARYYKRKDGLAL-GPGPFVTA 165
Query: 200 VETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGMTTVLTLT 259
+E A+ +A VVGKP F +P +M+GD D+ GM +L T
Sbjct: 166 LEYATDTKATVVGKPEKTFFLEALRGTGCEPEEAVMIGDDCRDDVGGAQDVGMLGILVKT 225
Query: 260 GVSRLEEAQ 268
G R + +
Sbjct: 226 GKYRASDEE 234
>gi|23308749 N-acetylneuraminic acid phosphatase [Homo sapiens]
Length = 248
Score = 41.2 bits (95), Expect = 0.001
Identities = 30/91 (32%), Positives = 42/91 (46%), Gaps = 18/91 (19%)
Query: 208 ALVVG------KPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCGM--TTVLTLT 259
A+VVG KP+P +F + P +MVGD LETDI G G+ T +
Sbjct: 153 AVVVGGEQREEKPAPSIFYYCCNLLGVQPGDCVMVGDTLETDIQGGLNAGLKATVWINKN 212
Query: 260 GVSRLEEAQAYLAAGQHDLVPHYYVESIADL 290
G+ L+ + VPHY V S+ +L
Sbjct: 213 GIVPLKSSP----------VPHYMVSSVLEL 233
>gi|94721336 RUN and FYVE domain-containing 1 isoform a [Homo
sapiens]
Length = 708
Score = 34.7 bits (78), Expect = 0.10
Identities = 23/72 (31%), Positives = 30/72 (41%)
Query: 97 RQRLPGPPDAPGAVFVLGGEGLRAELRAAGLRLAGDPSAGDGAAPRVRAVLVGYDEHFSF 156
R +LPGP D A EG A + R G+ SA G+A R A L G D
Sbjct: 41 RSQLPGPGDLRSATRPRAAEGWSAPILTLARRATGNLSASCGSALRAAAGLGGGDSGDGT 100
Query: 157 AKLREACAHLRD 168
A+ C + +
Sbjct: 101 ARAASKCQMMEE 112
>gi|194018732 hypothetical protein LOC100130958 [Homo sapiens]
Length = 242
Score = 33.5 bits (75), Expect = 0.23
Identities = 28/71 (39%), Positives = 36/71 (50%), Gaps = 11/71 (15%)
Query: 83 EQLFSSALCAARLLRQ---RLPGPPDAPGAVFVLGGEGLRAELRAAG--LRLAGDPSAGD 137
EQL S LR+ RL PP+ GA+ V +GL+AEL G +R A + AG+
Sbjct: 159 EQLLSERRLVRAKLREVERRLHSPPEVEGAMAV--NDGLKAELEIFGEQVRSAPEVGAGE 216
Query: 138 GAA----PRVR 144
G A PR R
Sbjct: 217 GEAGPELPRAR 227
>gi|14149716 protein phosphatase 1, regulatory subunit 12C [Homo
sapiens]
Length = 782
Score = 32.3 bits (72), Expect = 0.51
Identities = 36/129 (27%), Positives = 45/129 (34%), Gaps = 20/129 (15%)
Query: 102 GPPDAPGAVFVLGGEGLRAELRAAGLRLAGDPSAGDGAAPRVRAVLVGYDEHFSFAKLRE 161
GP PGA E R +LR G R +P G+ A VR A+
Sbjct: 6 GPAAGPGAAAAAARERRREQLRQWGARAGAEPGPGERRARTVRFERA--------AEFLA 57
Query: 162 ACA--HLRDPECLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMF 219
ACA L + +L A D P L + P L + A G AL
Sbjct: 58 ACAGGDLDEARLMLRAADPGPGAELDPAAPPPARAVLDST--NADGISALHQA------- 108
Query: 220 ECITENFSI 228
CI EN +
Sbjct: 109 -CIDENLEV 116
>gi|239751535 PREDICTED: hypothetical protein [Homo sapiens]
Length = 255
Score = 31.2 bits (69), Expect = 1.1
Identities = 39/127 (30%), Positives = 48/127 (37%), Gaps = 22/127 (17%)
Query: 33 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFGGLRAEQLFSSALCA 92
G R VP P RL R +A F SN +R R +SAL A
Sbjct: 104 GSRDVPAGPGFPPRLPRPFTSASF-SNQTRLRRRS-------------------ASALPA 143
Query: 93 ARLLRQRLPGPPDAPGAVFVLGGEGLRAELRAAGLRLAGDPSAGDGAAPRVRAVLVGYDE 152
RL QR +PG GG RA A LA +AG G + A + G D
Sbjct: 144 PRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSR--SAFVAGRDA 201
Query: 153 HFSFAKL 159
+ A+L
Sbjct: 202 ALACAQL 208
>gi|239746046 PREDICTED: hypothetical protein XP_002343643 [Homo
sapiens]
Length = 255
Score = 31.2 bits (69), Expect = 1.1
Identities = 39/127 (30%), Positives = 48/127 (37%), Gaps = 22/127 (17%)
Query: 33 GERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFGGLRAEQLFSSALCA 92
G R VP P RL R +A F SN +R R +SAL A
Sbjct: 104 GSRDVPAGPGFPPRLPRPFTSASF-SNQTRLRRRS-------------------ASALPA 143
Query: 93 ARLLRQRLPGPPDAPGAVFVLGGEGLRAELRAAGLRLAGDPSAGDGAAPRVRAVLVGYDE 152
RL QR +PG GG RA A LA +AG G + A + G D
Sbjct: 144 PRLCPQRASPGCSSPGVRGPGGGASPRARGGNAAAALAARQAAGGGRSR--SAFVAGRDA 201
Query: 153 HFSFAKL 159
+ A+L
Sbjct: 202 ALACAQL 208
>gi|14149740 oxysterol-binding protein-like protein 5 isoform a
[Homo sapiens]
Length = 879
Score = 30.8 bits (68), Expect = 1.5
Identities = 14/40 (35%), Positives = 18/40 (45%)
Query: 177 DRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSP 216
D PW PL D ++ G L + A RQ +G P P
Sbjct: 711 DHSPWDPLKDIAQFEQDGILRTLQQEAVARQTTFLGSPGP 750
>gi|13325057 solute carrier family 27 (fatty acid transporter),
member 5 [Homo sapiens]
Length = 690
Score = 30.8 bits (68), Expect = 1.5
Identities = 45/158 (28%), Positives = 67/158 (42%), Gaps = 12/158 (7%)
Query: 56 FVSNNSRRARPE---LALRFARLGFGGLRAEQLFSSALCAARLLRQRLPGPPDA----PG 108
FV RRAR + L + G G + +L + A AA L+ L P P
Sbjct: 116 FVDAFERRARAQPGRALLVWTGPGAGSVTFGELDARACQAAWALKAELGDPASLCAGEPT 175
Query: 109 AVFVLGGEGLRAELRAAGLRLAGDPSAGDGAAPRVRAVLVGYDEHFSFAKLREACAHLRD 168
A+ VL + + A GL G P+A P R + + + S A++ LR+
Sbjct: 176 ALLVLASQAVPALCMWLGLAKLGCPTAWIN--PHGRGMPLAHSVLSSGARVLVVDPDLRE 233
Query: 169 P-ECLL--VATDRDPWHPLSDGSRTPGTGSLAAAVETA 203
E +L + + LS S TPG G+L AA++ A
Sbjct: 234 SLEEILPKLQAENIRCFYLSHTSPTPGVGALGAALDAA 271
>gi|221136766 oxysterol-binding protein-like protein 5 isoform b
[Homo sapiens]
Length = 811
Score = 30.8 bits (68), Expect = 1.5
Identities = 14/40 (35%), Positives = 18/40 (45%)
Query: 177 DRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSP 216
D PW PL D ++ G L + A RQ +G P P
Sbjct: 643 DHSPWDPLKDIAQFEQDGILRTLQQEAVARQTTFLGSPGP 682
>gi|22035609 oxysterol-binding protein-like protein 5 isoform b
[Homo sapiens]
Length = 811
Score = 30.8 bits (68), Expect = 1.5
Identities = 14/40 (35%), Positives = 18/40 (45%)
Query: 177 DRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSP 216
D PW PL D ++ G L + A RQ +G P P
Sbjct: 643 DHSPWDPLKDIAQFEQDGILRTLQQEAVARQTTFLGSPGP 682
>gi|119508426 alpha 3 type IX collagen [Homo sapiens]
Length = 684
Score = 30.0 bits (66), Expect = 2.5
Identities = 19/54 (35%), Positives = 21/54 (38%)
Query: 85 LFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRAELRAAGLRLAGDPSAGDG 138
L L AA R LPGPP PG G +G+ E GL P G
Sbjct: 15 LLGELLAAAGAQRVGLPGPPGPPGPPGKPGQDGIDGEAGPPGLPGPPGPKGAPG 68
>gi|30795190 Williams-Beuren syndrome chromosome region 27 [Homo
sapiens]
Length = 245
Score = 30.0 bits (66), Expect = 2.5
Identities = 26/58 (44%), Positives = 31/58 (53%), Gaps = 3/58 (5%)
Query: 82 AEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGL-RAELRAAG-LRLAG-DPSAG 136
A L+ + A L Q LPGPP + + V G GL AELRA G L+L G D S G
Sbjct: 44 ATLLYRAPRLAVDCLTQALPGPPHSALILDVACGTGLVAAELRAPGFLQLHGVDGSPG 101
>gi|22748701 zinc finger protein 641 [Homo sapiens]
Length = 438
Score = 30.0 bits (66), Expect = 2.5
Identities = 40/152 (26%), Positives = 57/152 (37%), Gaps = 20/152 (13%)
Query: 137 DGAAPRVRAVLVGYDEHFSFAKLREACAHL-----RDPECLLVATDRDPWHPLSDGSRTP 191
DGA P+V G E + + HL +P+ L PW P
Sbjct: 35 DGAEPQVER---GSQEERPWRTVPGPLEHLCCDLEEEPQSLQEKAQSAPWVPAIPQEGNT 91
Query: 192 GTGSLAAAVETASGRQALVVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHRCG 251
G +AAA+ A+G Q LV K F E S+DP++T G + + CG
Sbjct: 92 GDWEMAAAL-LAAGSQGLVTIKDVSLCFS-QEEWRSLDPSQTDFYG-----EYVMQENCG 144
Query: 252 MTTVL-----TLTGVSRLEEAQAYLAAGQHDL 278
+ L L +S+LE + DL
Sbjct: 145 IVVSLRFPIPKLDMLSQLEGGEEQWVPDPQDL 176
>gi|157388929 epsin 3 [Homo sapiens]
Length = 632
Score = 29.6 bits (65), Expect = 3.3
Identities = 22/58 (37%), Positives = 25/58 (43%), Gaps = 8/58 (13%)
Query: 166 LRDPECLLVATDRDPWHPLSDGSRTPGTGSL-------AAAVETASG-RQALVVGKPS 215
L P L +T DPW + S TPG S + ET G QAL GKPS
Sbjct: 391 LNSPHHKLPSTGADPWGASLETSDTPGGASTFDPFAKPPESTETKEGLEQALPSGKPS 448
>gi|32171221 GRP1 (general receptor for phosphoinositides
1)-associated scaffold protein [Homo sapiens]
Length = 395
Score = 29.3 bits (64), Expect = 4.3
Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 4/42 (9%)
Query: 101 PGPPDAPGAVFVLGGEGLRAEL-RAAGLRLAGDPSAGDGAAP 141
PGP + P V G G RA L R+A +R AG G G AP
Sbjct: 310 PGPAETPA---VGPGPGPRAALSRSASVRCAGPGGGGGGGAP 348
>gi|31542667 transmembrane protein 40 [Homo sapiens]
Length = 233
Score = 29.3 bits (64), Expect = 4.3
Identities = 19/60 (31%), Positives = 29/60 (48%), Gaps = 8/60 (13%)
Query: 95 LLRQRLPGPPDAPGAVFVLGGEGLRAELRAAGLRLAGDPSAGDGAAPRVRAVLVGYDEHF 154
+L+ L DAPG V G GLR R DP++G+ A ++R + + D+ F
Sbjct: 109 VLKDELQLYGDAPGEVVPSGESGLR--------RRGSDPASGEVEASQLRRLNIKKDDEF 160
>gi|122937514 unc-13 homolog C [Homo sapiens]
Length = 2214
Score = 28.9 bits (63), Expect = 5.7
Identities = 20/71 (28%), Positives = 30/71 (42%), Gaps = 9/71 (12%)
Query: 158 KLREACAHLRDPECLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPY 217
K E C L + +CL A ++ H D ++T + TA + + K P
Sbjct: 1134 KCHEKCQDLLNADCLQRAAEKSSKHGAEDKTQT---------IITAMKERMKIREKNRPE 1184
Query: 218 MFECITENFSI 228
+FE I E F I
Sbjct: 1185 VFEVIQEMFQI 1195
>gi|14861834 cat eye syndrome chromosome region, candidate 5
isoform 2 precursor [Homo sapiens]
Length = 423
Score = 28.9 bits (63), Expect = 5.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 21 GVLFDCDGVLWNGERAVPGAPELLERLARA 50
G L D DGVL G R +P A + RL +
Sbjct: 48 GFLLDIDGVLVRGHRVIPAALKAFRRLVNS 77
>gi|21914862 cat eye syndrome chromosome region, candidate 5
isoform 1 [Homo sapiens]
Length = 393
Score = 28.9 bits (63), Expect = 5.7
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 21 GVLFDCDGVLWNGERAVPGAPELLERLARA 50
G L D DGVL G R +P A + RL +
Sbjct: 18 GFLLDIDGVLVRGHRVIPAALKAFRRLVNS 47
>gi|8922122 elaC homolog 1 [Homo sapiens]
Length = 363
Score = 28.5 bits (62), Expect = 7.4
Identities = 17/63 (26%), Positives = 31/63 (49%)
Query: 13 RDVLGRAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRARPELALRF 72
+ ++GR +L DC GV+ +G + +LL A A + + + P++A F
Sbjct: 241 KPIVGRKICILGDCSGVVGDGGVKLCFEADLLIHEATLDDAQMDKAKEHGHSTPQMAATF 300
Query: 73 ARL 75
A+L
Sbjct: 301 AKL 303
>gi|119709834 castor homolog 1, zinc finger isoform a [Homo sapiens]
Length = 1759
Score = 28.5 bits (62), Expect = 7.4
Identities = 22/51 (43%), Positives = 24/51 (47%), Gaps = 7/51 (13%)
Query: 101 PGPPDAPGAVFVLGGEG---LRAELRAAGLRLA----GDPSAGDGAAPRVR 144
PGPP + LG E L + AAGL LA GDP D AAP R
Sbjct: 1610 PGPPISLDGSLSLGAEPGSLLFLQSAAAGLGLALGDAGDPGPPDAAAPGPR 1660
>gi|119829187 alpha 1 type XVII collagen [Homo sapiens]
Length = 1497
Score = 28.5 bits (62), Expect = 7.4
Identities = 23/76 (30%), Positives = 30/76 (39%), Gaps = 6/76 (7%)
Query: 101 PGPPDAPGAVF-VLGGEGLRAELRAAGLRLAGDPSA-----GDGAAPRVRAVLVGYDEHF 154
PGPP PG V+ + E L + L AGL P G P V L Y
Sbjct: 1183 PGPPGIPGNVWSSISVEDLSSYLHTAGLSFIPGPPGPPGPPGPRGPPGVSGALATYAAEN 1242
Query: 155 SFAKLREACAHLRDPE 170
S + E ++L P+
Sbjct: 1243 SDSFRSELISYLTSPD 1258
>gi|239756827 PREDICTED: hypothetical protein [Homo sapiens]
Length = 332
Score = 28.1 bits (61), Expect = 9.7
Identities = 19/63 (30%), Positives = 25/63 (39%)
Query: 38 PGAPELLERLARAGKAALFVSNNSRRARPELALRFARLGFGGLRAEQLFSSALCAARLLR 97
PG LER A G A L P L +G G L + + + A+R LR
Sbjct: 92 PGTGVRLERRAGLGTALLRPRQPETTTHPTLHQEATAIGAGALERKPGLPTLIWASRFLR 151
Query: 98 QRL 100
R+
Sbjct: 152 MRM 154
>gi|239755509 PREDICTED: hypothetical protein [Homo sapiens]
Length = 344
Score = 28.1 bits (61), Expect = 9.7
Identities = 39/128 (30%), Positives = 46/128 (35%), Gaps = 28/128 (21%)
Query: 87 SSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRAELRAAGLRLAGDPSAGDGAAPRVRAV 146
S+A RL R+R G A A F LGG R + + P AG APR R
Sbjct: 212 SAARRRRRLRRRRRRGERAAAAAEFGLGG---RTCVWQGAAQHRARP-AGLARAPRARP- 266
Query: 147 LVGYDEHFSFAKLREACAHLRDPECLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGR 206
RDP + A R HP S PG G+L A TA
Sbjct: 267 --------------------RDPAGVSRAPPRPRPHPASPA---PGDGALRGAEATAPAA 303
Query: 207 QALVVGKP 214
LV +P
Sbjct: 304 LGLVQPRP 311
>gi|239750019 PREDICTED: hypothetical protein [Homo sapiens]
Length = 344
Score = 28.1 bits (61), Expect = 9.7
Identities = 39/128 (30%), Positives = 46/128 (35%), Gaps = 28/128 (21%)
Query: 87 SSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRAELRAAGLRLAGDPSAGDGAAPRVRAV 146
S+A RL R+R G A A F LGG R + + P AG APR R
Sbjct: 212 SAARRRRRLRRRRRRGERAAAAAEFGLGG---RTCVWQGAAQHRARP-AGLARAPRARP- 266
Query: 147 LVGYDEHFSFAKLREACAHLRDPECLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGR 206
RDP + A R HP S PG G+L A TA
Sbjct: 267 --------------------RDPAGVSRAPPRPRPHPASPA---PGDGALRGAEATAPAA 303
Query: 207 QALVVGKP 214
LV +P
Sbjct: 304 LGLVQPRP 311
>gi|239744332 PREDICTED: hypothetical protein XP_002343119 [Homo
sapiens]
Length = 344
Score = 28.1 bits (61), Expect = 9.7
Identities = 39/128 (30%), Positives = 46/128 (35%), Gaps = 28/128 (21%)
Query: 87 SSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRAELRAAGLRLAGDPSAGDGAAPRVRAV 146
S+A RL R+R G A A F LGG R + + P AG APR R
Sbjct: 212 SAARRRRRLRRRRRRGERAAAAAEFGLGG---RTCVWQGAAQHRARP-AGLARAPRARP- 266
Query: 147 LVGYDEHFSFAKLREACAHLRDPECLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGR 206
RDP + A R HP S PG G+L A TA
Sbjct: 267 --------------------RDPAGVSRAPPRPRPHPASPA---PGDGALRGAEATAPAA 303
Query: 207 QALVVGKP 214
LV +P
Sbjct: 304 LGLVQPRP 311
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.138 0.417
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,036,847
Number of Sequences: 37866
Number of extensions: 575438
Number of successful extensions: 2254
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 15
Number of HSP's that attempted gapping in prelim test: 2216
Number of HSP's gapped (non-prelim): 51
length of query: 296
length of database: 18,247,518
effective HSP length: 102
effective length of query: 194
effective length of database: 14,385,186
effective search space: 2790726084
effective search space used: 2790726084
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.