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Search of human proteins with 18375623
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|18375623 HLA-B associated transcript 1 [Homo sapiens]
(428 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|4758112 HLA-B associated transcript 1 [Homo sapiens] 851 0.0
gi|18375623 HLA-B associated transcript 1 [Homo sapiens] 851 0.0
gi|21040371 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 [Homo sapi... 780 0.0
gi|83700235 eukaryotic translation initiation factor 4A2 [Homo s... 260 2e-69
gi|4503529 eukaryotic translation initiation factor 4A isoform 1... 255 6e-68
gi|7661920 eukaryotic translation initiation factor 4A, isoform ... 254 8e-68
gi|164664518 DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 [Homo sapi... 244 8e-65
gi|14251212 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 [Homo sapi... 229 4e-60
gi|20149629 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 ... 211 8e-55
gi|6005743 DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 1 [H... 211 1e-54
gi|8922886 DDX19-like protein [Homo sapiens] 209 4e-54
gi|62241022 DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 3 [... 198 7e-51
gi|224593278 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Homo sap... 194 1e-49
gi|62241024 DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 2 [... 190 2e-48
gi|164419732 DEAD (Asp-Glu-Ala-Asp) box polypeptide 25 [Homo sap... 187 2e-47
gi|31542656 DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Homo sapi... 187 2e-47
gi|41327771 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo sapi... 186 3e-47
gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapi... 185 6e-47
gi|21071032 DEAD-box protein abstrakt [Homo sapiens] 179 3e-45
gi|188035877 DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 [Homo sap... 179 3e-45
gi|41327776 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 2 ... 172 5e-43
gi|169881239 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked ... 171 1e-42
gi|13514809 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked [... 171 1e-42
gi|87196351 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3 [Homo... 170 2e-42
gi|148613856 DEAD box polypeptide 17 isoform 3 [Homo sapiens] 167 2e-41
gi|38201710 DEAD box polypeptide 17 isoform 1 [Homo sapiens] 167 2e-41
gi|45446747 DEAD box polypeptide 42 protein [Homo sapiens] 165 6e-41
gi|45446743 DEAD box polypeptide 42 protein [Homo sapiens] 165 6e-41
gi|222352149 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Homo sap... 163 2e-40
gi|209862869 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 3 ... 162 5e-40
>gi|4758112 HLA-B associated transcript 1 [Homo sapiens]
Length = 428
Score = 851 bits (2199), Expect = 0.0
Identities = 428/428 (100%), Positives = 428/428 (100%)
Query: 1 MAENDVDNELLDYEDDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAI 60
MAENDVDNELLDYEDDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAI
Sbjct: 1 MAENDVDNELLDYEDDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAI 60
Query: 61 VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMC 120
VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMC
Sbjct: 61 VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMC 120
Query: 121 HTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALA 180
HTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALA
Sbjct: 121 HTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALA 180
Query: 181 RNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCR 240
RNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCR
Sbjct: 181 RNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCR 240
Query: 241 KFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRC 300
KFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRC
Sbjct: 241 KFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRC 300
Query: 301 IALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAF 360
IALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAF
Sbjct: 301 IALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAF 360
Query: 361 NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDI 420
NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDI
Sbjct: 361 NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDI 420
Query: 421 SSYIEQTR 428
SSYIEQTR
Sbjct: 421 SSYIEQTR 428
>gi|18375623 HLA-B associated transcript 1 [Homo sapiens]
Length = 428
Score = 851 bits (2199), Expect = 0.0
Identities = 428/428 (100%), Positives = 428/428 (100%)
Query: 1 MAENDVDNELLDYEDDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAI 60
MAENDVDNELLDYEDDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAI
Sbjct: 1 MAENDVDNELLDYEDDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAI 60
Query: 61 VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMC 120
VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMC
Sbjct: 61 VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMC 120
Query: 121 HTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALA 180
HTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALA
Sbjct: 121 HTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALA 180
Query: 181 RNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCR 240
RNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCR
Sbjct: 181 RNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCR 240
Query: 241 KFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRC 300
KFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRC
Sbjct: 241 KFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRC 300
Query: 301 IALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAF 360
IALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAF
Sbjct: 301 IALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAF 360
Query: 361 NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDI 420
NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDI
Sbjct: 361 NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDI 420
Query: 421 SSYIEQTR 428
SSYIEQTR
Sbjct: 421 SSYIEQTR 428
>gi|21040371 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 [Homo
sapiens]
Length = 427
Score = 780 bits (2014), Expect = 0.0
Identities = 384/428 (89%), Positives = 412/428 (96%), Gaps = 1/428 (0%)
Query: 1 MAENDVDNELLDYEDDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAI 60
MAE DV+N+LLDY+++E E A + AP KKD+KGSYVSIHSSGFRDFLLKPELLRAI
Sbjct: 1 MAEQDVENDLLDYDEEE-EPQAPQESTPAPPKKDIKGSYVSIHSSGFRDFLLKPELLRAI 59
Query: 61 VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMC 120
VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ+EPV GQV+VLVMC
Sbjct: 60 VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMC 119
Query: 121 HTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALA 180
HTRELAFQISKEYERFSKYMP+VKV+VFFGGLSIKKDEEVLKKNCPH+VVGTPGRILAL
Sbjct: 120 HTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALV 179
Query: 181 RNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCR 240
RN+S +LK++KHF+LDECDKMLEQLDMRRDVQEIFR+TPHEKQ MMFSATLSK+IRPVCR
Sbjct: 180 RNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCR 239
Query: 241 KFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRC 300
KFMQDPME+FVDDETKLTLHGLQQYYVKLKD+EKNRKLFDLLDVLEFNQV+IFVKSVQRC
Sbjct: 240 KFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVIIFVKSVQRC 299
Query: 301 IALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAF 360
+ALAQLLVEQNFPAIAIHRGM QEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNI F
Sbjct: 300 MALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVF 359
Query: 361 NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDI 420
NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVN++ELP+EIDI
Sbjct: 360 NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNVAELPEEIDI 419
Query: 421 SSYIEQTR 428
S+YIEQ+R
Sbjct: 420 STYIEQSR 427
>gi|83700235 eukaryotic translation initiation factor 4A2 [Homo
sapiens]
Length = 407
Score = 260 bits (664), Expect = 2e-69
Identities = 144/370 (38%), Positives = 219/370 (59%), Gaps = 5/370 (1%)
Query: 47 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 106
F D LK LLR I GFE PS +Q I I G DV+ QA+SG GKTA F ++ LQQ
Sbjct: 35 FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQ 94
Query: 107 LEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCP 166
LE + LV+ TRELA QI K YM GG +++ + + L+ P
Sbjct: 95 LEIEFKETQALVLAPTRELAQQIQKVILALGDYM-GATCHACIGGTNVRNEMQKLQAEAP 153
Query: 167 HIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMM 226
HIVVGTPGR+ + + L+ K IK F+LDE D+ML + + + EIF+ QV++
Sbjct: 154 HIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSR-GFKDQIYEIFQKLNTSIQVVL 212
Query: 227 FSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNE-KNRKLFDLLDVL 285
SAT+ ++ V +KFM+DP+ I V E +LTL G++Q+Y+ ++ E K L DL + L
Sbjct: 213 LSATMPTDVLEVTKKFMRDPIRILVKKE-ELTLEGIKQFYINVEREEWKLDTLCDLYETL 271
Query: 286 EFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATN 345
Q VIF+ + ++ L + + ++F A+H M Q+ER ++F+ R+L+ T+
Sbjct: 272 TITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTD 331
Query: 346 LFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQD 405
L RG+D+++V++ NYD+P + + Y+HR+ R GRFG KG+AI FV++E D +IL D++
Sbjct: 332 LLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEE-DKRILRDIET 390
Query: 406 RFEVNISELP 415
+ + E+P
Sbjct: 391 FYNTTVEEMP 400
>gi|4503529 eukaryotic translation initiation factor 4A isoform 1
[Homo sapiens]
Length = 406
Score = 255 bits (651), Expect = 6e-68
Identities = 139/370 (37%), Positives = 217/370 (58%), Gaps = 5/370 (1%)
Query: 47 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 106
F D L LLR I GFE PS +Q I I G DV+ QA+SG GKTA F ++ LQQ
Sbjct: 34 FDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQ 93
Query: 107 LEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCP 166
+E LV+ TRELA QI K YM GG +++ + + L+ P
Sbjct: 94 IELDLKATQALVLAPTRELAQQIQKVVMALGDYM-GASCHACIGGTNVRAEVQKLQMEAP 152
Query: 167 HIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMM 226
HI+VGTPGR+ + + L+ K+IK F+LDE D+ML + + + +IF+ QV++
Sbjct: 153 HIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSR-GFKDQIYDIFQKLNSNTQVVL 211
Query: 227 FSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNE-KNRKLFDLLDVL 285
SAT+ ++ V +KFM+DP+ I V E +LTL G++Q+Y+ ++ E K L DL + L
Sbjct: 212 LSATMPSDVLEVTKKFMRDPIRILVKKE-ELTLEGIRQFYINVEREEWKLDTLCDLYETL 270
Query: 286 EFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATN 345
Q VIF+ + ++ L + + ++F A+H M Q+ER ++F+ R+L+ T+
Sbjct: 271 TITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTD 330
Query: 346 LFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQD 405
L RG+D+++V++ NYD+P + + Y+HR+ R GRFG KG+AI V++E D + L D++
Sbjct: 331 LLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEE-DKRTLRDIET 389
Query: 406 RFEVNISELP 415
+ +I E+P
Sbjct: 390 FYNTSIEEMP 399
>gi|7661920 eukaryotic translation initiation factor 4A, isoform 3
[Homo sapiens]
Length = 411
Score = 254 bits (650), Expect = 8e-68
Identities = 140/365 (38%), Positives = 218/365 (59%), Gaps = 6/365 (1%)
Query: 52 LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVT 111
L+ +LLR I GFE PS +Q I Q I G DV+ Q++SG GKTA F ++ LQ L+
Sbjct: 45 LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQV 104
Query: 112 GQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVG 171
+ L++ TRELA QI K YM NV+ GG ++ +D L H+V G
Sbjct: 105 RETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDYG-QHVVAG 162
Query: 172 TPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATL 231
TPGR+ + R +SL + IK +LDE D+ML + + + +++R P QV++ SATL
Sbjct: 163 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNK-GFKEQIYDVYRYLPPATQVVLISATL 221
Query: 232 SKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNE-KNRKLFDLLDVLEFNQV 290
EI + KFM DP+ I V + +LTL G++Q++V ++ E K L DL D L Q
Sbjct: 222 PHEILEMTNKFMTDPIRILVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQA 280
Query: 291 VIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRG 350
VIF + ++ L + + E NF ++H MPQ+ER S ++F+ R+L++T+++ RG
Sbjct: 281 VIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARG 340
Query: 351 MDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVN 410
+D+ +V++ NYD+P + + Y+HR+ R+GR+G KG+AI FV ++ D +IL D++ +
Sbjct: 341 LDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKND-DIRILRDIEQYYSTQ 399
Query: 411 ISELP 415
I E+P
Sbjct: 400 IDEMP 404
>gi|164664518 DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 [Homo
sapiens]
Length = 483
Score = 244 bits (624), Expect = 8e-65
Identities = 145/429 (33%), Positives = 234/429 (54%), Gaps = 11/429 (2%)
Query: 4 NDVDNELLDYEDDEVETAAGGDGAEAPAK---KDVK---GSYVSIHSSGFRDFLLKPELL 57
N ++N T GD + K KD++ S + F D+ LK ELL
Sbjct: 49 NTINNGTQQQAQSMTTTIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELL 108
Query: 58 RAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVL 117
I + G+E PS +Q E IP A+ G D+L +AK+G GK+ +++ L++L+ + +
Sbjct: 109 MGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAM 168
Query: 118 VMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRIL 177
V+ TRELA Q+S+ + SK+M KV GG +++ D+ + + H+V+ TPGRIL
Sbjct: 169 VIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLR-DDIMRLDDTVHVVIATPGRIL 227
Query: 178 ALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRP 237
L + + H++ +LDE DK+L Q D + +++I P +Q++++SAT ++
Sbjct: 228 DLIKKGVAKVDHVQMIVLDEADKLLSQ-DFVQIMEDIILTLPKNRQILLYSATFPLSVQK 286
Query: 238 VCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSV 297
+Q P EI + +E LTL G+ QYY + + +K L L L+ NQ +IF S
Sbjct: 287 FMNSHLQKPYEINLMEE--LTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSS 344
Query: 298 QRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVN 357
QR LA+ + + + IH M QE R + F++ R LV T+LF RG+DI+ VN
Sbjct: 345 QRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVN 404
Query: 358 IAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDE 417
+ N+D P+ ++TYLHR+ R+GRFG GLAI ++ +D L ++++ I +P
Sbjct: 405 VVINFDFPKLAETYLHRIGRSGRFGHLGLAINLIT-YDDRFNLKSIEEQLGTEIKPIPSN 463
Query: 418 IDISSYIEQ 426
ID S Y+ +
Sbjct: 464 IDKSLYVAE 472
>gi|14251212 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 [Homo
sapiens]
Length = 824
Score = 229 bits (584), Expect = 4e-60
Identities = 138/390 (35%), Positives = 203/390 (52%), Gaps = 11/390 (2%)
Query: 37 GSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKT 96
G + + F LL +L + GFE PS VQ + IP G+D++ QAKSG GKT
Sbjct: 54 GDVLLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKT 113
Query: 97 AVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKK 156
VF L L +L++ TRE+A QI M ++ VF GG + +
Sbjct: 114 CVFSTIALDSLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQ 173
Query: 157 DEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFR 216
D+ LKK C HI VG+PGRI L LN I+ FILDE DK+LE+ + + I+
Sbjct: 174 DKTRLKK-C-HIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYS 231
Query: 217 MTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKD----- 271
P KQ++ SAT + + K+M+DP + ++ +L GL+QYY +
Sbjct: 232 SLPASKQMLAVSATYPEFLANALTKYMRDPTFVRLNSSDP-SLIGLKQYYKVVNSYPLAH 290
Query: 272 ---NEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLS 328
EK + L +L + FNQ ++F R LA +L + FPA I M Q +RL
Sbjct: 291 KVFEEKTQHLQELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQRLD 350
Query: 329 RYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAI 388
+ K F R+L++T+L RG+D E+VN+ N D+P D +TY+HR+ RAGRFGT GL +
Sbjct: 351 AMAKLKHFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTV 410
Query: 389 TFVSDENDAKILNDVQDRFEVNISELPDEI 418
T+ + ++ + + +N+ LPD I
Sbjct: 411 TYCCRGEEENMMMRIAQKCNINLLPLPDPI 440
>gi|20149629 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1
[Homo sapiens]
Length = 455
Score = 211 bits (538), Expect = 8e-55
Identities = 125/374 (33%), Positives = 206/374 (55%), Gaps = 6/374 (1%)
Query: 47 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 106
F+D + L A G+ P+++Q E IP A+ G D++ A++G GKT F L L
Sbjct: 26 FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNA 85
Query: 107 LEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCP 166
L ++ LV+ TRELAFQIS+++E + V+ AV GG+ L K P
Sbjct: 86 LLETPQRLFALVLTPTRELAFQISEQFEALGSSI-GVQSAVIVGGIDSMSQSLALAKK-P 143
Query: 167 HIVVGTPGRILA-LARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVM 225
HI++ TPGR++ L K NL+ +K+ ++DE D++L +D +V +I ++ P +++
Sbjct: 144 HIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILN-MDFETEVDKILKVIPRDRKTF 202
Query: 226 MFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVL 285
+FSAT++K+++ + R +++P++ V + + T+ LQQYY+ + K+ L +L+ L
Sbjct: 203 LFSATMTKKVQKLQRAALKNPVKCAVSSKYQ-TVEKLQQYYIFIPSKFKDTYLVYILNEL 261
Query: 286 EFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATN 345
N +IF + A LL F AI +H M Q +RL +FK R IL+AT+
Sbjct: 262 AGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATD 321
Query: 346 LFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQD 405
+ RG+DI V++ N+D+P S Y+HRV R R G G AITFV+ + D ++ ++
Sbjct: 322 VASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVT-QYDVELFQRIEH 380
Query: 406 RFEVNISELPDEID 419
+ P + D
Sbjct: 381 LIGKKLPGFPTQDD 394
>gi|6005743 DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 1 [Homo
sapiens]
Length = 479
Score = 211 bits (537), Expect = 1e-54
Identities = 131/399 (32%), Positives = 216/399 (54%), Gaps = 18/399 (4%)
Query: 32 KKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILG--MDVLCQA 89
++D S+ S F + LKP+LL+ + GF PS++Q +P + +++ Q+
Sbjct: 81 QRDPNSPLYSVKS--FEELRLKPQLLQGVYAMGFNRPSKIQENALPLMLAEPPQNLIAQS 138
Query: 90 KSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFF 149
+SG GKTA FVLA L Q+EP L + T ELA Q K E+ K+ P +K+A
Sbjct: 139 QSGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAV 198
Query: 150 GGLSIKKDEEVLKKNCPHIVVGTPGRILA-LARNKSLNLKHIKHFILDECDKMLEQLDMR 208
G +++ +++ ++ IV+GTPG +L ++ K ++ K IK F+LDE D M+ +
Sbjct: 199 RGNKLERGQKISEQ----IVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQ 254
Query: 209 RDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVK 268
I RM P Q+++FSAT + +K + DP I + E + TL ++QYYV
Sbjct: 255 DQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEE-TLDTIKQYYVL 313
Query: 269 LKD-NEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERL 327
+EK + L +L + Q +IF + + LA L ++ + M E+R
Sbjct: 314 CSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRA 373
Query: 328 SRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSD------TYLHRVARAGRF 381
+ ++F++ + ++LV TN+ RG+D+E+V++ N+D+P D D TYLHR+ R GRF
Sbjct: 374 AVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRF 433
Query: 382 GTKGLAITFVSDENDAKILNDVQDRFEVNISEL-PDEID 419
G +GLA+ V ++ ILN +Q+ F I L D++D
Sbjct: 434 GKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLD 472
>gi|8922886 DDX19-like protein [Homo sapiens]
Length = 478
Score = 209 bits (532), Expect = 4e-54
Identities = 130/399 (32%), Positives = 216/399 (54%), Gaps = 18/399 (4%)
Query: 32 KKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILG--MDVLCQA 89
++D S+ S F + LKP+LL+ + GF PS++Q +P + +++ Q+
Sbjct: 80 QRDPNSPLYSVKS--FEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQS 137
Query: 90 KSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFF 149
+SG GKTA FVLA L ++EP L + T ELA Q K E+ K+ P +K+A
Sbjct: 138 QSGTGKTAAFVLAMLSRVEPSDRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAV 197
Query: 150 GGLSIKKDEEVLKKNCPHIVVGTPGRILA-LARNKSLNLKHIKHFILDECDKMLEQLDMR 208
G +++ +++ ++ IV+GTPG +L ++ K ++ K IK F+LDE D M+ +
Sbjct: 198 RGNKLERGQKISEQ----IVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQ 253
Query: 209 RDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVK 268
I RM P Q+++FSAT + +K + DP I + E + TL ++QYYV
Sbjct: 254 DQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEE-TLDTIKQYYVL 312
Query: 269 LKD-NEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERL 327
+EK + L +L + Q +IF + + LA L ++ + M E+R
Sbjct: 313 CSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRA 372
Query: 328 SRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSD------TYLHRVARAGRF 381
+ ++F++ + ++LV TN+ RG+D+E+V++ N+D+P D D TYLHR+ R GRF
Sbjct: 373 AVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRF 432
Query: 382 GTKGLAITFVSDENDAKILNDVQDRFEVNISEL-PDEID 419
G +GLA+ V ++ ILN +Q+ F I L D++D
Sbjct: 433 GKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLD 471
>gi|62241022 DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 3
[Homo sapiens]
Length = 370
Score = 198 bits (504), Expect = 7e-51
Identities = 122/367 (33%), Positives = 200/367 (54%), Gaps = 16/367 (4%)
Query: 64 GFEHPSEVQHECIPQAILG--MDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCH 121
GF PS++Q +P + +++ Q++SG GKTA FVLA L Q+EP L +
Sbjct: 2 GFNRPSKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPANKYPQCLCLSP 61
Query: 122 TRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILA-LA 180
T ELA Q K E+ K+ P +K+A G +++ +++ ++ IV+GTPG +L +
Sbjct: 62 TYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISEQ----IVIGTPGTVLDWCS 117
Query: 181 RNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCR 240
+ K ++ K IK F+LDE D M+ + I RM P Q+++FSAT + +
Sbjct: 118 KLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQ 177
Query: 241 KFMQDPMEIFVDDETKLTLHGLQQYYVKLKD-NEKNRKLFDLLDVLEFNQVVIFVKSVQR 299
K + DP I + E + TL ++QYYV +EK + L +L + Q +IF + +
Sbjct: 178 KVVPDPNVIKLKREEE-TLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKT 236
Query: 300 CIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIA 359
LA L ++ + M E+R + ++F++ + ++LV TN+ RG+D+E+V++
Sbjct: 237 ASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVV 296
Query: 360 FNYDMPEDSD------TYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISE 413
N+D+P D D TYLHR+ R GRFG +GLA+ V ++ ILN +Q+ F I
Sbjct: 297 INFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIER 356
Query: 414 L-PDEID 419
L D++D
Sbjct: 357 LDTDDLD 363
>gi|224593278 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Homo
sapiens]
Length = 796
Score = 194 bits (493), Expect = 1e-49
Identities = 122/367 (33%), Positives = 201/367 (54%), Gaps = 18/367 (4%)
Query: 47 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 106
F+D L LL+AI GF+ P+ +Q CIP +LG D+ A +G GKTA F L L++
Sbjct: 220 FQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLER 279
Query: 107 L------EPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEV 160
L PVT VLV+ TREL Q+ + +++ N+ + GGL +K E
Sbjct: 280 LIYKPRQAPVT---RVLVLVPTRELGIQVHSVTRQLAQFC-NITTCLAVGGLDVKSQEAA 335
Query: 161 LKKNCPHIVVGTPGRILALARN-KSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTP 219
L+ P I++ TPGR++ N S +L I+ ILDE D+ML++ ++EI RM
Sbjct: 336 LRA-APDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEY-FEEQMKEIIRMCS 393
Query: 220 HEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRK-- 277
H +Q M+FSAT++ E++ + +++P+ IFV+ T + L+Q +++++ N + +
Sbjct: 394 HHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPF-LRQEFIRIRPNREGDREA 452
Query: 278 -LFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDF 336
+ LL + V++F ++ ++ + LL +H + Q +RL ++FKD
Sbjct: 453 IVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDE 512
Query: 337 QRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEND 396
Q ILVAT++ RG+DIE V N+ MP Y+HRV R R G G +++ V E++
Sbjct: 513 QIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVG-EDE 571
Query: 397 AKILNDV 403
K+L ++
Sbjct: 572 RKMLKEI 578
>gi|62241024 DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 2
[Homo sapiens]
Length = 448
Score = 190 bits (482), Expect = 2e-48
Identities = 117/348 (33%), Positives = 191/348 (54%), Gaps = 14/348 (4%)
Query: 81 LGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYM 140
L +++ Q++SG GKTA FVLA L Q+EP L + T ELA Q K E+ K+
Sbjct: 99 LPQNLIAQSQSGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFY 158
Query: 141 PNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILA-LARNKSLNLKHIKHFILDECD 199
P +K+A G +++ +++ ++ IV+GTPG +L ++ K ++ K IK F+LDE D
Sbjct: 159 PELKLAYAVRGNKLERGQKISEQ----IVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEAD 214
Query: 200 KMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTL 259
M+ + I RM P Q+++FSAT + +K + DP I + E + TL
Sbjct: 215 VMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEE-TL 273
Query: 260 HGLQQYYVKLKD-NEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIH 318
++QYYV +EK + L +L + Q +IF + + LA L ++ +
Sbjct: 274 DTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLS 333
Query: 319 RGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSD------TYL 372
M E+R + ++F++ + ++LV TN+ RG+D+E+V++ N+D+P D D TYL
Sbjct: 334 GEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYL 393
Query: 373 HRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISEL-PDEID 419
HR+ R GRFG +GLA+ V ++ ILN +Q+ F I L D++D
Sbjct: 394 HRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLD 441
>gi|164419732 DEAD (Asp-Glu-Ala-Asp) box polypeptide 25 [Homo
sapiens]
Length = 483
Score = 187 bits (475), Expect = 2e-47
Identities = 124/406 (30%), Positives = 211/406 (51%), Gaps = 22/406 (5%)
Query: 32 KKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILG--MDVLCQA 89
+KD S+ + F + LK ELL+ I GF PS++Q +P + +++ Q+
Sbjct: 86 QKDPSSPLYSVKT--FEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQS 143
Query: 90 KSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFF 149
+SG GKTA FVLA L ++ + L + T ELA Q + E+ K+ +V+V
Sbjct: 144 QSGTGKTAAFVLAMLSRVNALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAI 203
Query: 150 GGLSIKKDEEVLKKNCPHIVVGTPGRILALA-RNKSLNLKHIKHFILDECDKMLEQLDMR 208
G I + ++ K+ I++GTPG +L + K ++L I+ F+LDE D M++
Sbjct: 204 RGNRIPRGTDITKQ----IIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFS 259
Query: 209 RDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVK 268
I R P E Q+++FSAT + + + DP I + E +LTL+ ++QYYV
Sbjct: 260 DHSIRIQRALPSECQMLLFSATFEDSVWHFAERIIPDPNVIKLRKE-ELTLNNIRQYYVL 318
Query: 269 LKD-NEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERL 327
+ +K + L ++ + Q +IF ++ + L +++ + + E+R
Sbjct: 319 CEHRKDKYQALCNIYGSITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRA 378
Query: 328 SRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMP------EDSDTYLHRVARAGRF 381
S Q+F+D + ++L+ TN+ RG+D+++V I N+D+P D +TYLHR+ R GRF
Sbjct: 379 SIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRF 438
Query: 382 GTKGLAITFVSDENDAKILNDVQDRFEVNISEL----PDEIDISSY 423
G KGLA + + ++ L +QD F +I +L DEI+ Y
Sbjct: 439 GKKGLAFNMI-EVDELPSLMKIQDHFNSSIKQLNAEDMDEIEKIDY 483
>gi|31542656 DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Homo
sapiens]
Length = 483
Score = 187 bits (475), Expect = 2e-47
Identities = 121/381 (31%), Positives = 203/381 (53%), Gaps = 13/381 (3%)
Query: 45 SGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATL 104
+GF + L L+ G + P+ VQ CIP + G D L AK+G GKTA FVL L
Sbjct: 2 AGFAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPIL 61
Query: 105 QQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKN 164
Q+L + LV+ TRELA+QI++++ K + +K + GG+ + L +
Sbjct: 62 QKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPL-GLKDCIIVGGMDMVAQALELSRK 120
Query: 165 CPHIVVGTPGRILA-LARNKSLNLKHIKHFILDECDKMLEQ--LDMRRDVQEIFRMTPHE 221
PH+V+ TPGR+ L + + ++K I+ ++DE D++LEQ D D++ I P
Sbjct: 121 -PHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVPAR 179
Query: 222 KQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKL-TLHGLQQYYVKLKDNEKNRKLFD 280
+Q ++FSATL+ +R + P F + + + T+ L Q Y+ + + K+ L
Sbjct: 180 RQTLLFSATLTDTLRELQGLATNQPF--FWEAQAPVSTVEQLDQRYLLVPEKVKDAYLVH 237
Query: 281 LL----DVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDF 336
L+ D E ++IF + + C L +L + +FP +A+H M Q+ER + +FK
Sbjct: 238 LIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKFSFPTVALHSMMKQKERFAALAKFKSS 297
Query: 337 QRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEND 396
RIL+AT++ RG+DI V + N++ P Y+HRV R R G +G AIT V+ + D
Sbjct: 298 IYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVT-QYD 356
Query: 397 AKILNDVQDRFEVNISELPDE 417
+++ ++++ + + E E
Sbjct: 357 IHLVHAIEEQIKKKLEEFSVE 377
>gi|41327771 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo
sapiens]
Length = 820
Score = 186 bits (473), Expect = 3e-47
Identities = 120/418 (28%), Positives = 208/418 (49%), Gaps = 39/418 (9%)
Query: 36 KGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGK 95
KG + ++D L P +L I CG++ P+ +Q + IP + D++ A++G GK
Sbjct: 382 KGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGK 441
Query: 96 TAVFVLATL---------QQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVA 146
TA F++ L ++E +++ TRELA QI +E +F K + ++
Sbjct: 442 TAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPL-GIRTV 500
Query: 147 VFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLD 206
GG+S + L+ C IV+ TPGR++ + N+ L L + +LDE D+M++ +
Sbjct: 501 AVIGGISREDQGFRLRMGC-EIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMID-MG 558
Query: 207 MRRDVQEIFRMTP-------------------------HE-KQVMMFSATLSKEIRPVCR 240
DVQ+I P H+ +Q +MF+AT+ + + R
Sbjct: 559 FEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLAR 618
Query: 241 KFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRC 300
+++ P +++ K ++Q + ++EK +KL +L+ ++IFV + C
Sbjct: 619 SYLRRPAVVYIGSAGK-PHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGC 677
Query: 301 IALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAF 360
LA+ L + + A +H G QE+R K + ILVAT++ GRG+DI+ V++
Sbjct: 678 DVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVV 737
Query: 361 NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEI 418
NYDM ++ + Y+HR+ R GR G G+AITF++ E+ A Q E +S P E+
Sbjct: 738 NYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPEL 795
>gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo
sapiens]
Length = 1031
Score = 185 bits (470), Expect = 6e-47
Identities = 115/375 (30%), Positives = 206/375 (54%), Gaps = 16/375 (4%)
Query: 55 ELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ------LE 108
++L ++ G+E P+ +Q + IP + G D++ AK+G GKT F+L + LE
Sbjct: 382 KILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLE 441
Query: 109 PVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHI 168
G ++V +M TRELA QI+KE ++FSK + ++V +GG I + LK+ I
Sbjct: 442 EGEGPIAV-IMTPTRELALQITKECKKFSKTL-GLRVVCVYGGTGISEQIAELKRGA-EI 498
Query: 169 VVGTPGRI---LALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVM 225
+V TPGR+ LA + NL+ + + +LDE D+M + + V I ++Q +
Sbjct: 499 IVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFD-MGFEPQVMRIVDNVRPDRQTV 557
Query: 226 MFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLD-V 284
MFSAT + + + R+ + P+E+ V + + ++Q + +++ +K KL +LL
Sbjct: 558 MFSATFPRAMEALARRILSKPIEVQVGGRS-VVCSDVEQQVIVIEEEKKFLKLLELLGHY 616
Query: 285 LEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVAT 344
E V+IFV + L + L+ ++P +++H G+ Q +R S FK+ ++LVAT
Sbjct: 617 QESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVAT 676
Query: 345 NLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQ 404
++ RG+D++ + + NY P + Y+HR R GR G KG A TF++ E+ A+ D+
Sbjct: 677 SVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFIT-EDQARYAGDII 735
Query: 405 DRFEVNISELPDEID 419
E++ + +P +++
Sbjct: 736 KALELSGTAVPPDLE 750
>gi|21071032 DEAD-box protein abstrakt [Homo sapiens]
Length = 622
Score = 179 bits (455), Expect = 3e-45
Identities = 114/386 (29%), Positives = 206/386 (53%), Gaps = 23/386 (5%)
Query: 35 VKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMG 94
V+G + F++ +LR + G HP+ +Q + IP + G D++ A +G G
Sbjct: 171 VEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSG 230
Query: 95 KTAVFVLATL------QQLEPVTGQVSV--LVMCHTRELAFQISKEYERFSKYM-----P 141
KT VF L + ++ P + + L++C +RELA Q E + + + P
Sbjct: 231 KTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSP 290
Query: 142 NVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKM 201
++ A+ GG+S+K+ E ++ H++V TPGR++ L + K ++L ++ LDE D+M
Sbjct: 291 LLRCALCIGGMSVKEQMETIRHGV-HMMVATPGRLMDLLQKKMVSLDICRYLALDEADRM 349
Query: 202 LEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHG 261
++ + D++ IF ++Q ++FSAT+ K+I+ + + P+ I V +L
Sbjct: 350 ID-MGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDV 408
Query: 262 LQQY-YVKLKDNEKNRKLFDLLDVLEFNQ--VVIFVKSVQRCIALAQLLVEQNFPAIAIH 318
+Q+ YVK + K+ LL+ L+ V+IF + A+ + L+ + A+AIH
Sbjct: 409 IQEVEYVK-----EEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIH 463
Query: 319 RGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARA 378
G QEER + F++ ++ +LVAT++ +G+D + NYDMPE+ + Y+HR+ R
Sbjct: 464 GGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRT 523
Query: 379 GRFGTKGLAITFVSDENDAKILNDVQ 404
GR G G+A TF++ D +L D++
Sbjct: 524 GRSGNTGIATTFINKACDESVLMDLK 549
>gi|188035877 DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 [Homo
sapiens]
Length = 619
Score = 179 bits (455), Expect = 3e-45
Identities = 120/426 (28%), Positives = 218/426 (51%), Gaps = 21/426 (4%)
Query: 10 LLDYEDDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPS 69
+L+ ++D++E G V+G V+ F L L + G+E P+
Sbjct: 174 ILNLQEDQIENLKQQLGIL------VQGQEVTRPIIDFEHCSLPEVLNHNLKKSGYEVPT 227
Query: 70 EVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQI 129
+Q + IP +LG D+L A +G GKTA F+L + + + S L++ TRELA QI
Sbjct: 228 PIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIMRALFESKTPSALILTPTRELAIQI 287
Query: 130 SKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKH 189
++ + +P +K + GGL + L+++ +++ TPGR+L + + S+ L
Sbjct: 288 ERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLQQHV-KVIIATPGRLLDIIKQSSVELCG 346
Query: 190 IKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEI 249
+K ++DE D ML ++ ++ V +I P++ Q ++ SAT+ I + + + +P+ I
Sbjct: 347 VKIVVVDEADTML-KMGFQQQVLDILENIPNDCQTILVSATIPTSIEQLASQLLHNPVRI 405
Query: 250 FVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQ--VVIFVKSVQRCIALAQLL 307
+ E L ++Q + ++D K +KLF++L+ + + V++FV C A LL
Sbjct: 406 -ITGEKNLPCANVRQIILWVEDPAKKKKLFEILNDKKLFKPPVLVFVD----CKLGADLL 460
Query: 308 VE-----QNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNY 362
E +I+IH Q ER + + + ++V+T + GRG+D+ V + N+
Sbjct: 461 SEAVQKITGLKSISIHSEKSQIERKNILKGLLEGDYEVVVSTGVLGRGLDLISVRLVVNF 520
Query: 363 DMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISS 422
DMP D Y+H++ R GR G G AITF+++ N ++ D+ R + S LP ++ S
Sbjct: 521 DMPSSMDEYVHQIGRVGRLGQNGTAITFINN-NSKRLFWDIAKRVKPTGSILPPQLLNSP 579
Query: 423 YIEQTR 428
Y+ +
Sbjct: 580 YLHDQK 585
>gi|41327776 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 2
[Homo sapiens]
Length = 406
Score = 172 bits (436), Expect = 5e-43
Identities = 110/374 (29%), Positives = 187/374 (50%), Gaps = 55/374 (14%)
Query: 47 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 106
F+D + L A G+ P+++Q E IP A+ G D++ A++G GKT F L L
Sbjct: 26 FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNA 85
Query: 107 LEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCP 166
L ++ LV+ TRELAFQIS+++E + V+ AV GG+ L K P
Sbjct: 86 LLETPQRLFALVLTPTRELAFQISEQFEALGSSI-GVQSAVIVGGIDSMSQSLALAKK-P 143
Query: 167 HIVVGTPGRIL-ALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVM 225
HI++ TPGR++ L K NL+ +K+ ++DE D++L +D +V +I ++ P +++
Sbjct: 144 HIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRIL-NMDFETEVDKILKVIPRDRKTF 202
Query: 226 MFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVL 285
+FSAT++K+++ + R +++P++ V + + T+ LQQYY+ + K+++L L
Sbjct: 203 LFSATMTKKVQKLQRAALKNPVKCAVSSKYQ-TVEKLQQYYIFIPSKFKSKRLGSL---- 257
Query: 286 EFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATN 345
+FK R IL+AT+
Sbjct: 258 ---------------------------------------------NKFKAKARSILLATD 272
Query: 346 LFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQD 405
+ RG+DI V++ N+D+P S Y+HRV R R G G AITFV+ + D ++ ++
Sbjct: 273 VASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVT-QYDVELFQRIEH 331
Query: 406 RFEVNISELPDEID 419
+ P + D
Sbjct: 332 LIGKKLPGFPTQDD 345
>gi|169881239 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
[Homo sapiens]
Length = 660
Score = 171 bits (433), Expect = 1e-42
Identities = 133/448 (29%), Positives = 212/448 (47%), Gaps = 31/448 (6%)
Query: 3 ENDVDNELLDYEDDEVETAAGGDGAEAPAKKD-----VKGSYVSIHSSGFRDFLLKPELL 57
E+D L E E E +GG+ K D GS H F D + ++
Sbjct: 131 EDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGSNCPPHIENFSDIDMGEIIM 190
Query: 58 RAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLE---PVTGQV 114
I + P+ VQ IP D++ A++G GKTA F+L L Q+ P
Sbjct: 191 GNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALK 250
Query: 115 SV---------------LVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEE 159
+V LV+ TRELA QI +E +FS Y V+ V +GG I +
Sbjct: 251 AVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFS-YRSRVRPCVVYGGADIGQQIR 309
Query: 160 VLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLE---QLDMRRDVQEIFR 216
L++ C H++V TPGR++ + + L K+ +LDE D+ML+ + +RR V++
Sbjct: 310 DLERGC-HLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTM 368
Query: 217 MTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNR 276
+ MMFSAT KEI+ + R F+ + + + V T + Q V ++D +K
Sbjct: 369 PPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVG-RVGSTSENITQKVVWVEDLDKRS 427
Query: 277 KLFDLLDVLEFNQV-VIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKD 335
L D+L + + ++FV++ + +L L + + +IH Q +R QF+
Sbjct: 428 FLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRS 487
Query: 336 FQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEN 395
+ ILVAT + RG+DI V N+D+P D + Y+HR+ R GR G GLA +F +++N
Sbjct: 488 GKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKN 547
Query: 396 DAKILNDVQDRFEVNISELPDEIDISSY 423
I D+ D E+P ++ +Y
Sbjct: 548 -MNITKDLLDLLVEAKQEVPSWLENMAY 574
>gi|13514809 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
[Homo sapiens]
Length = 660
Score = 171 bits (433), Expect = 1e-42
Identities = 133/448 (29%), Positives = 212/448 (47%), Gaps = 31/448 (6%)
Query: 3 ENDVDNELLDYEDDEVETAAGGDGAEAPAKKD-----VKGSYVSIHSSGFRDFLLKPELL 57
E+D L E E E +GG+ K D GS H F D + ++
Sbjct: 131 EDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGSNCPPHIENFSDIDMGEIIM 190
Query: 58 RAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLE---PVTGQV 114
I + P+ VQ IP D++ A++G GKTA F+L L Q+ P
Sbjct: 191 GNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALK 250
Query: 115 SV---------------LVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEE 159
+V LV+ TRELA QI +E +FS Y V+ V +GG I +
Sbjct: 251 AVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFS-YRSRVRPCVVYGGADIGQQIR 309
Query: 160 VLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLE---QLDMRRDVQEIFR 216
L++ C H++V TPGR++ + + L K+ +LDE D+ML+ + +RR V++
Sbjct: 310 DLERGC-HLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTM 368
Query: 217 MTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNR 276
+ MMFSAT KEI+ + R F+ + + + V T + Q V ++D +K
Sbjct: 369 PPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVG-RVGSTSENITQKVVWVEDLDKRS 427
Query: 277 KLFDLLDVLEFNQV-VIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKD 335
L D+L + + ++FV++ + +L L + + +IH Q +R QF+
Sbjct: 428 FLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRS 487
Query: 336 FQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEN 395
+ ILVAT + RG+DI V N+D+P D + Y+HR+ R GR G GLA +F +++N
Sbjct: 488 GKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKN 547
Query: 396 DAKILNDVQDRFEVNISELPDEIDISSY 423
I D+ D E+P ++ +Y
Sbjct: 548 -MNITKDLLDLLVEAKQEVPSWLENMAY 574
>gi|87196351 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3 [Homo
sapiens]
Length = 662
Score = 170 bits (431), Expect = 2e-42
Identities = 131/448 (29%), Positives = 212/448 (47%), Gaps = 31/448 (6%)
Query: 3 ENDVDNELLDYEDDEVETAAGGDGAEAPAKKD-----VKGSYVSIHSSGFRDFLLKPELL 57
E+D L E E E +GG+ K D G+ H F D + ++
Sbjct: 133 EDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIM 192
Query: 58 RAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQL------EPVT 111
I + P+ VQ IP D++ A++G GKTA F+L L Q+ E +
Sbjct: 193 GNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALR 252
Query: 112 GQVS------------VLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEE 159
LV+ TRELA QI +E +FS Y V+ V +GG I +
Sbjct: 253 AMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFS-YRSRVRPCVVYGGADIGQQIR 311
Query: 160 VLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLE---QLDMRRDVQEIFR 216
L++ C H++V TPGR++ + + L K+ +LDE D+ML+ + +RR V++
Sbjct: 312 DLERGC-HLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTM 370
Query: 217 MTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNR 276
+ MMFSAT KEI+ + R F+ + + + V T + Q V +++++K
Sbjct: 371 PPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVG-RVGSTSENITQKVVWVEESDKRS 429
Query: 277 KLFDLLDVLEFNQV-VIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKD 335
L DLL+ + + ++FV++ + +L L + + +IH Q +R QF+
Sbjct: 430 FLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRS 489
Query: 336 FQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEN 395
+ ILVAT + RG+DI V N+D+P D + Y+HR+ R GR G GLA +F ++ N
Sbjct: 490 GKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERN 549
Query: 396 DAKILNDVQDRFEVNISELPDEIDISSY 423
I D+ D E+P ++ +Y
Sbjct: 550 -INITKDLLDLLVEAKQEVPSWLENMAY 576
>gi|148613856 DEAD box polypeptide 17 isoform 3 [Homo sapiens]
Length = 731
Score = 167 bits (423), Expect = 2e-41
Identities = 115/400 (28%), Positives = 196/400 (49%), Gaps = 31/400 (7%)
Query: 10 LLDYEDDEVE-----TAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCG 64
L YE DE+ T GGD P + H + F +++ ++D
Sbjct: 144 LTPYEVDELRRKKEITVRGGDVCPKPV--------FAFHHANFPQYVMD-----VLMDQH 190
Query: 65 FEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ------LEPVTGQVSVLV 118
F P+ +Q + P A+ G D++ A++G GKT ++L + LE G + LV
Sbjct: 191 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPIC-LV 249
Query: 119 MCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILA 178
+ TRELA Q+ + + + K +K +GG L++ I + TPGR++
Sbjct: 250 LAPTRELAQQVQQVADDYGK-CSRLKSTCIYGGAPKGPQIRDLERGV-EICIATPGRLID 307
Query: 179 LARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPV 238
+ NL+ + +LDE D+ML+ + +++I ++Q +M+SAT KE+R +
Sbjct: 308 FLESGKTNLRRCTYLVLDEADRMLD-MGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQL 366
Query: 239 CRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVL---EFNQVVIFVK 295
F++D +I V + H + Q ++EK+ KL L++ + + N+ +IFV+
Sbjct: 367 AEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVE 426
Query: 296 SVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIER 355
+ +RC L + + +PA+ IH Q ER +F+ + IL+AT++ RG+D+E
Sbjct: 427 TKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVED 486
Query: 356 VNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEN 395
V NYD P S+ Y+HR+ R R KG A TF + N
Sbjct: 487 VKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGN 526
>gi|38201710 DEAD box polypeptide 17 isoform 1 [Homo sapiens]
Length = 729
Score = 167 bits (423), Expect = 2e-41
Identities = 115/400 (28%), Positives = 196/400 (49%), Gaps = 31/400 (7%)
Query: 10 LLDYEDDEVE-----TAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCG 64
L YE DE+ T GGD P + H + F +++ ++D
Sbjct: 144 LTPYEVDELRRKKEITVRGGDVCPKPV--------FAFHHANFPQYVMD-----VLMDQH 190
Query: 65 FEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ------LEPVTGQVSVLV 118
F P+ +Q + P A+ G D++ A++G GKT ++L + LE G + LV
Sbjct: 191 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPIC-LV 249
Query: 119 MCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILA 178
+ TRELA Q+ + + + K +K +GG L++ I + TPGR++
Sbjct: 250 LAPTRELAQQVQQVADDYGK-CSRLKSTCIYGGAPKGPQIRDLERGV-EICIATPGRLID 307
Query: 179 LARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPV 238
+ NL+ + +LDE D+ML+ + +++I ++Q +M+SAT KE+R +
Sbjct: 308 FLESGKTNLRRCTYLVLDEADRMLD-MGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQL 366
Query: 239 CRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVL---EFNQVVIFVK 295
F++D +I V + H + Q ++EK+ KL L++ + + N+ +IFV+
Sbjct: 367 AEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVE 426
Query: 296 SVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIER 355
+ +RC L + + +PA+ IH Q ER +F+ + IL+AT++ RG+D+E
Sbjct: 427 TKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVED 486
Query: 356 VNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEN 395
V NYD P S+ Y+HR+ R R KG A TF + N
Sbjct: 487 VKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGN 526
>gi|45446747 DEAD box polypeptide 42 protein [Homo sapiens]
Length = 938
Score = 165 bits (418), Expect = 6e-41
Identities = 115/381 (30%), Positives = 186/381 (48%), Gaps = 12/381 (3%)
Query: 35 VKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMG 94
V G+ S F F +L+ I + P+ +Q + +P A+ G D++ AK+G G
Sbjct: 243 VSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSG 302
Query: 95 KTAVFVLATL------QQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVF 148
KTA F+ L ++LEP G ++V+V C TREL QI E +RF K N++
Sbjct: 303 KTAAFIWPMLIHIMDQKELEPGDGPIAVIV-CPTRELCQQIHAECKRFGKAY-NLRSVAV 360
Query: 149 FGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMR 208
+GG S+ + + L++ IVV TPGR++ + K+ NL+ + + + DE D+M + +
Sbjct: 361 YGGGSMWEQAKALQEGA-EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFD-MGFE 418
Query: 209 RDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVK 268
V+ I ++Q ++FSAT K+I + R + DP+ + D + Q +
Sbjct: 419 YQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEIL 478
Query: 269 LKDNEK-NRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERL 327
K N L++ V++FV LA L ++ +H M Q ER
Sbjct: 479 HSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERN 538
Query: 328 SRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLA 387
FK +LVAT++ RG+DI + NYD+ D DT+ HR+ R GR G KG+A
Sbjct: 539 KVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVA 598
Query: 388 ITFVSDENDAKILNDVQDRFE 408
T ++ + D+ D+ E
Sbjct: 599 YTLLTPK-DSNFAGDLVRNLE 618
>gi|45446743 DEAD box polypeptide 42 protein [Homo sapiens]
Length = 938
Score = 165 bits (418), Expect = 6e-41
Identities = 115/381 (30%), Positives = 186/381 (48%), Gaps = 12/381 (3%)
Query: 35 VKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMG 94
V G+ S F F +L+ I + P+ +Q + +P A+ G D++ AK+G G
Sbjct: 243 VSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSG 302
Query: 95 KTAVFVLATL------QQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVF 148
KTA F+ L ++LEP G ++V+V C TREL QI E +RF K N++
Sbjct: 303 KTAAFIWPMLIHIMDQKELEPGDGPIAVIV-CPTRELCQQIHAECKRFGKAY-NLRSVAV 360
Query: 149 FGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMR 208
+GG S+ + + L++ IVV TPGR++ + K+ NL+ + + + DE D+M + +
Sbjct: 361 YGGGSMWEQAKALQEGA-EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFD-MGFE 418
Query: 209 RDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVK 268
V+ I ++Q ++FSAT K+I + R + DP+ + D + Q +
Sbjct: 419 YQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEIL 478
Query: 269 LKDNEK-NRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERL 327
K N L++ V++FV LA L ++ +H M Q ER
Sbjct: 479 HSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERN 538
Query: 328 SRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLA 387
FK +LVAT++ RG+DI + NYD+ D DT+ HR+ R GR G KG+A
Sbjct: 539 KVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVA 598
Query: 388 ITFVSDENDAKILNDVQDRFE 408
T ++ + D+ D+ E
Sbjct: 599 YTLLTPK-DSNFAGDLVRNLE 618
>gi|222352149 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Homo
sapiens]
Length = 648
Score = 163 bits (413), Expect = 2e-40
Identities = 107/378 (28%), Positives = 198/378 (52%), Gaps = 16/378 (4%)
Query: 50 FLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFV------LAT 103
F PE++ I GF+ P+ +Q + P + G+D++ A++G GKT ++ L
Sbjct: 247 FQCYPEVMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLCYLMPGFIHLVL 306
Query: 104 LQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEV--L 161
L+ + +LV+ TRELA Q+ E ++S Y V V+ GG +DE++ L
Sbjct: 307 QPSLKGQRNRPGMLVLTPTRELALQVEGECCKYS-YKGLRSVCVYGGG---NRDEQIEEL 362
Query: 162 KKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHE 221
KK I++ TPGR+ L + +NLK+I + +LDE DKML+ + + +I +
Sbjct: 363 KKGVD-IIIATPGRLNDLQMSNFVNLKNITYLVLDEADKMLD-MGFEPQIMKILLDVRPD 420
Query: 222 KQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDL 281
+Q +M SAT + + + ++++PM ++V + + ++Q + + EK +
Sbjct: 421 RQTVMTSATWPHSVHRLAQSYLKEPMIVYVGTLDLVAVSSVKQNIIVTTEEEKWSHMQTF 480
Query: 282 LDVLEF-NQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRI 340
L + ++V++FV L+ L+ N ++H Q +R + FK + RI
Sbjct: 481 LQSMSSTDKVIVFVSRKAVADHLSSDLILGNISVESLHGDREQRDREKALENFKTGKVRI 540
Query: 341 LVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKIL 400
L+AT+L RG+D+ V +N+D P + + Y+HR+ R GR G G++IT ++ ND ++
Sbjct: 541 LIATDLASRGLDVHDVTHVYNFDFPRNIEEYVHRIGRTGRAGRTGVSITTLT-RNDWRVA 599
Query: 401 NDVQDRFEVNISELPDEI 418
+++ + E +P+E+
Sbjct: 600 SELINILERANQSIPEEL 617
>gi|209862869 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 3
[Homo sapiens]
Length = 724
Score = 162 bits (410), Expect = 5e-40
Identities = 112/397 (28%), Positives = 196/397 (49%), Gaps = 25/397 (6%)
Query: 47 FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 106
F + L L I G+ + VQ IP + G D++ A++G GKTA F+L L
Sbjct: 290 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAH 349
Query: 107 L--EPVTG-------QVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKD 157
+ + +T + +++ TREL QI E +FS + V+ V +GG +
Sbjct: 350 MMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFS-FGTCVRAVVIYGGTQLGHS 408
Query: 158 EEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQ---LDMRRDVQEI 214
+ + C +I+ TPGR++ + + + LK IK+ +LDE D+ML+ +M++ +
Sbjct: 409 IRQIVQGC-NILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCP 467
Query: 215 FRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEK 274
+ ++Q +MFSAT +EI+ + +F++ + +QQ +++ K
Sbjct: 468 GMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSK 527
Query: 275 NRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFK 334
KL ++L + + ++FV++ ++ +A L ++ +IH Q ER F+
Sbjct: 528 REKLVEILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFR 587
Query: 335 DFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDE 394
+ +LVAT++ RG+DIE V N+D+P D Y+HR+ R GR G G AI+F E
Sbjct: 588 FGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLE 647
Query: 395 ND-------AKILNDVQDRFEVNISELPDEIDISSYI 424
+D K+L D Q ++ +EI S+YI
Sbjct: 648 SDNHLAQPLVKVLTDAQQ----DVPAWLEEIAFSTYI 680
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.322 0.138 0.395
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,926,872
Number of Sequences: 37866
Number of extensions: 634818
Number of successful extensions: 1811
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1571
Number of HSP's gapped (non-prelim): 89
length of query: 428
length of database: 18,247,518
effective HSP length: 105
effective length of query: 323
effective length of database: 14,271,588
effective search space: 4609722924
effective search space used: 4609722924
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.