Guide to the Human Genome
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Search of human proteins with 18375623

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|18375623 HLA-B associated transcript 1 [Homo sapiens]
         (428 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|4758112 HLA-B associated transcript 1 [Homo sapiens]               851   0.0  
gi|18375623 HLA-B associated transcript 1 [Homo sapiens]              851   0.0  
gi|21040371 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 [Homo sapi...   780   0.0  
gi|83700235 eukaryotic translation initiation factor 4A2 [Homo s...   260   2e-69
gi|4503529 eukaryotic translation initiation factor 4A isoform 1...   255   6e-68
gi|7661920 eukaryotic translation initiation factor 4A, isoform ...   254   8e-68
gi|164664518 DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 [Homo sapi...   244   8e-65
gi|14251212 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 [Homo sapi...   229   4e-60
gi|20149629 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1 ...   211   8e-55
gi|6005743 DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 1 [H...   211   1e-54
gi|8922886 DDX19-like protein [Homo sapiens]                          209   4e-54
gi|62241022 DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 3 [...   198   7e-51
gi|224593278 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Homo sap...   194   1e-49
gi|62241024 DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 2 [...   190   2e-48
gi|164419732 DEAD (Asp-Glu-Ala-Asp) box polypeptide 25 [Homo sap...   187   2e-47
gi|31542656 DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Homo sapi...   187   2e-47
gi|41327771 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo sapi...   186   3e-47
gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapi...   185   6e-47
gi|21071032 DEAD-box protein abstrakt [Homo sapiens]                  179   3e-45
gi|188035877 DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 [Homo sap...   179   3e-45
gi|41327776 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 2 ...   172   5e-43
gi|169881239 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked ...   171   1e-42
gi|13514809 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked [...   171   1e-42
gi|87196351 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3 [Homo...   170   2e-42
gi|148613856 DEAD box polypeptide 17 isoform 3 [Homo sapiens]         167   2e-41
gi|38201710 DEAD box polypeptide 17 isoform 1 [Homo sapiens]          167   2e-41
gi|45446747 DEAD box polypeptide 42 protein [Homo sapiens]            165   6e-41
gi|45446743 DEAD box polypeptide 42 protein [Homo sapiens]            165   6e-41
gi|222352149 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Homo sap...   163   2e-40
gi|209862869 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 3 ...   162   5e-40

>gi|4758112 HLA-B associated transcript 1 [Homo sapiens]
          Length = 428

 Score =  851 bits (2199), Expect = 0.0
 Identities = 428/428 (100%), Positives = 428/428 (100%)

Query: 1   MAENDVDNELLDYEDDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAI 60
           MAENDVDNELLDYEDDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAI
Sbjct: 1   MAENDVDNELLDYEDDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAI 60

Query: 61  VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMC 120
           VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMC
Sbjct: 61  VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMC 120

Query: 121 HTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALA 180
           HTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALA
Sbjct: 121 HTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALA 180

Query: 181 RNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCR 240
           RNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCR
Sbjct: 181 RNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCR 240

Query: 241 KFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRC 300
           KFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRC
Sbjct: 241 KFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRC 300

Query: 301 IALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAF 360
           IALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAF
Sbjct: 301 IALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAF 360

Query: 361 NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDI 420
           NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDI
Sbjct: 361 NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDI 420

Query: 421 SSYIEQTR 428
           SSYIEQTR
Sbjct: 421 SSYIEQTR 428


>gi|18375623 HLA-B associated transcript 1 [Homo sapiens]
          Length = 428

 Score =  851 bits (2199), Expect = 0.0
 Identities = 428/428 (100%), Positives = 428/428 (100%)

Query: 1   MAENDVDNELLDYEDDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAI 60
           MAENDVDNELLDYEDDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAI
Sbjct: 1   MAENDVDNELLDYEDDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAI 60

Query: 61  VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMC 120
           VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMC
Sbjct: 61  VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMC 120

Query: 121 HTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALA 180
           HTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALA
Sbjct: 121 HTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALA 180

Query: 181 RNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCR 240
           RNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCR
Sbjct: 181 RNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCR 240

Query: 241 KFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRC 300
           KFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRC
Sbjct: 241 KFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRC 300

Query: 301 IALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAF 360
           IALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAF
Sbjct: 301 IALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAF 360

Query: 361 NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDI 420
           NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDI
Sbjct: 361 NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDI 420

Query: 421 SSYIEQTR 428
           SSYIEQTR
Sbjct: 421 SSYIEQTR 428


>gi|21040371 DEAD (Asp-Glu-Ala-Asp) box polypeptide 39 [Homo
           sapiens]
          Length = 427

 Score =  780 bits (2014), Expect = 0.0
 Identities = 384/428 (89%), Positives = 412/428 (96%), Gaps = 1/428 (0%)

Query: 1   MAENDVDNELLDYEDDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAI 60
           MAE DV+N+LLDY+++E E  A  +   AP KKD+KGSYVSIHSSGFRDFLLKPELLRAI
Sbjct: 1   MAEQDVENDLLDYDEEE-EPQAPQESTPAPPKKDIKGSYVSIHSSGFRDFLLKPELLRAI 59

Query: 61  VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMC 120
           VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ+EPV GQV+VLVMC
Sbjct: 60  VDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMC 119

Query: 121 HTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALA 180
           HTRELAFQISKEYERFSKYMP+VKV+VFFGGLSIKKDEEVLKKNCPH+VVGTPGRILAL 
Sbjct: 120 HTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALV 179

Query: 181 RNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCR 240
           RN+S +LK++KHF+LDECDKMLEQLDMRRDVQEIFR+TPHEKQ MMFSATLSK+IRPVCR
Sbjct: 180 RNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSATLSKDIRPVCR 239

Query: 241 KFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRC 300
           KFMQDPME+FVDDETKLTLHGLQQYYVKLKD+EKNRKLFDLLDVLEFNQV+IFVKSVQRC
Sbjct: 240 KFMQDPMEVFVDDETKLTLHGLQQYYVKLKDSEKNRKLFDLLDVLEFNQVIIFVKSVQRC 299

Query: 301 IALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAF 360
           +ALAQLLVEQNFPAIAIHRGM QEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNI F
Sbjct: 300 MALAQLLVEQNFPAIAIHRGMAQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIVF 359

Query: 361 NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDI 420
           NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVN++ELP+EIDI
Sbjct: 360 NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNVAELPEEIDI 419

Query: 421 SSYIEQTR 428
           S+YIEQ+R
Sbjct: 420 STYIEQSR 427


>gi|83700235 eukaryotic translation initiation factor 4A2 [Homo
           sapiens]
          Length = 407

 Score =  260 bits (664), Expect = 2e-69
 Identities = 144/370 (38%), Positives = 219/370 (59%), Gaps = 5/370 (1%)

Query: 47  FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 106
           F D  LK  LLR I   GFE PS +Q   I   I G DV+ QA+SG GKTA F ++ LQQ
Sbjct: 35  FDDMNLKESLLRGIYAYGFEKPSAIQQRAIIPCIKGYDVIAQAQSGTGKTATFAISILQQ 94

Query: 107 LEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCP 166
           LE    +   LV+  TRELA QI K       YM         GG +++ + + L+   P
Sbjct: 95  LEIEFKETQALVLAPTRELAQQIQKVILALGDYM-GATCHACIGGTNVRNEMQKLQAEAP 153

Query: 167 HIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMM 226
           HIVVGTPGR+  +   + L+ K IK F+LDE D+ML +   +  + EIF+      QV++
Sbjct: 154 HIVVGTPGRVFDMLNRRYLSPKWIKMFVLDEADEMLSR-GFKDQIYEIFQKLNTSIQVVL 212

Query: 227 FSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNE-KNRKLFDLLDVL 285
            SAT+  ++  V +KFM+DP+ I V  E +LTL G++Q+Y+ ++  E K   L DL + L
Sbjct: 213 LSATMPTDVLEVTKKFMRDPIRILVKKE-ELTLEGIKQFYINVEREEWKLDTLCDLYETL 271

Query: 286 EFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATN 345
              Q VIF+ + ++   L + +  ++F   A+H  M Q+ER    ++F+    R+L+ T+
Sbjct: 272 TITQAVIFLNTRRKVDWLTEKMHARDFTVSALHGDMDQKERDVIMREFRSGSSRVLITTD 331

Query: 346 LFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQD 405
           L  RG+D+++V++  NYD+P + + Y+HR+ R GRFG KG+AI FV++E D +IL D++ 
Sbjct: 332 LLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINFVTEE-DKRILRDIET 390

Query: 406 RFEVNISELP 415
            +   + E+P
Sbjct: 391 FYNTTVEEMP 400


>gi|4503529 eukaryotic translation initiation factor 4A isoform 1
           [Homo sapiens]
          Length = 406

 Score =  255 bits (651), Expect = 6e-68
 Identities = 139/370 (37%), Positives = 217/370 (58%), Gaps = 5/370 (1%)

Query: 47  FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 106
           F D  L   LLR I   GFE PS +Q   I   I G DV+ QA+SG GKTA F ++ LQQ
Sbjct: 34  FDDMNLSESLLRGIYAYGFEKPSAIQQRAILPCIKGYDVIAQAQSGTGKTATFAISILQQ 93

Query: 107 LEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCP 166
           +E        LV+  TRELA QI K       YM         GG +++ + + L+   P
Sbjct: 94  IELDLKATQALVLAPTRELAQQIQKVVMALGDYM-GASCHACIGGTNVRAEVQKLQMEAP 152

Query: 167 HIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMM 226
           HI+VGTPGR+  +   + L+ K+IK F+LDE D+ML +   +  + +IF+      QV++
Sbjct: 153 HIIVGTPGRVFDMLNRRYLSPKYIKMFVLDEADEMLSR-GFKDQIYDIFQKLNSNTQVVL 211

Query: 227 FSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNE-KNRKLFDLLDVL 285
            SAT+  ++  V +KFM+DP+ I V  E +LTL G++Q+Y+ ++  E K   L DL + L
Sbjct: 212 LSATMPSDVLEVTKKFMRDPIRILVKKE-ELTLEGIRQFYINVEREEWKLDTLCDLYETL 270

Query: 286 EFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATN 345
              Q VIF+ + ++   L + +  ++F   A+H  M Q+ER    ++F+    R+L+ T+
Sbjct: 271 TITQAVIFINTRRKVDWLTEKMHARDFTVSAMHGDMDQKERDVIMREFRSGSSRVLITTD 330

Query: 346 LFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQD 405
           L  RG+D+++V++  NYD+P + + Y+HR+ R GRFG KG+AI  V++E D + L D++ 
Sbjct: 331 LLARGIDVQQVSLVINYDLPTNRENYIHRIGRGGRFGRKGVAINMVTEE-DKRTLRDIET 389

Query: 406 RFEVNISELP 415
            +  +I E+P
Sbjct: 390 FYNTSIEEMP 399


>gi|7661920 eukaryotic translation initiation factor 4A, isoform 3
           [Homo sapiens]
          Length = 411

 Score =  254 bits (650), Expect = 8e-68
 Identities = 140/365 (38%), Positives = 218/365 (59%), Gaps = 6/365 (1%)

Query: 52  LKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVT 111
           L+ +LLR I   GFE PS +Q   I Q I G DV+ Q++SG GKTA F ++ LQ L+   
Sbjct: 45  LREDLLRGIYAYGFEKPSAIQQRAIKQIIKGRDVIAQSQSGTGKTATFSISVLQCLDIQV 104

Query: 112 GQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVG 171
            +   L++  TRELA QI K       YM NV+     GG ++ +D   L     H+V G
Sbjct: 105 RETQALILAPTRELAVQIQKGLLALGDYM-NVQCHACIGGTNVGEDIRKLDYG-QHVVAG 162

Query: 172 TPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATL 231
           TPGR+  + R +SL  + IK  +LDE D+ML +   +  + +++R  P   QV++ SATL
Sbjct: 163 TPGRVFDMIRRRSLRTRAIKMLVLDEADEMLNK-GFKEQIYDVYRYLPPATQVVLISATL 221

Query: 232 SKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNE-KNRKLFDLLDVLEFNQV 290
             EI  +  KFM DP+ I V  + +LTL G++Q++V ++  E K   L DL D L   Q 
Sbjct: 222 PHEILEMTNKFMTDPIRILVKRD-ELTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQA 280

Query: 291 VIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRG 350
           VIF  + ++   L + + E NF   ++H  MPQ+ER S  ++F+    R+L++T+++ RG
Sbjct: 281 VIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQKERESIMKEFRSGASRVLISTDVWARG 340

Query: 351 MDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVN 410
           +D+ +V++  NYD+P + + Y+HR+ R+GR+G KG+AI FV ++ D +IL D++  +   
Sbjct: 341 LDVPQVSLIINYDLPNNRELYIHRIGRSGRYGRKGVAINFVKND-DIRILRDIEQYYSTQ 399

Query: 411 ISELP 415
           I E+P
Sbjct: 400 IDEMP 404


>gi|164664518 DEAD (Asp-Glu-Ala-Asp) box polypeptide 6 [Homo
           sapiens]
          Length = 483

 Score =  244 bits (624), Expect = 8e-65
 Identities = 145/429 (33%), Positives = 234/429 (54%), Gaps = 11/429 (2%)

Query: 4   NDVDNELLDYEDDEVETAAGGDGAEAPAK---KDVK---GSYVSIHSSGFRDFLLKPELL 57
           N ++N           T   GD  +   K   KD++       S   + F D+ LK ELL
Sbjct: 49  NTINNGTQQQAQSMTTTIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELL 108

Query: 58  RAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVL 117
             I + G+E PS +Q E IP A+ G D+L +AK+G GK+  +++  L++L+     +  +
Sbjct: 109 MGIFEMGWEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAM 168

Query: 118 VMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRIL 177
           V+  TRELA Q+S+   + SK+M   KV    GG +++ D+ +   +  H+V+ TPGRIL
Sbjct: 169 VIVPTRELALQVSQICIQVSKHMGGAKVMATTGGTNLR-DDIMRLDDTVHVVIATPGRIL 227

Query: 178 ALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRP 237
            L +     + H++  +LDE DK+L Q D  + +++I    P  +Q++++SAT    ++ 
Sbjct: 228 DLIKKGVAKVDHVQMIVLDEADKLLSQ-DFVQIMEDIILTLPKNRQILLYSATFPLSVQK 286

Query: 238 VCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSV 297
                +Q P EI + +E  LTL G+ QYY  + + +K   L  L   L+ NQ +IF  S 
Sbjct: 287 FMNSHLQKPYEINLMEE--LTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSS 344

Query: 298 QRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVN 357
           QR   LA+ + +  +    IH  M QE R   +  F++   R LV T+LF RG+DI+ VN
Sbjct: 345 QRVELLAKKISQLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVN 404

Query: 358 IAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDE 417
           +  N+D P+ ++TYLHR+ R+GRFG  GLAI  ++  +D   L  ++++    I  +P  
Sbjct: 405 VVINFDFPKLAETYLHRIGRSGRFGHLGLAINLIT-YDDRFNLKSIEEQLGTEIKPIPSN 463

Query: 418 IDISSYIEQ 426
           ID S Y+ +
Sbjct: 464 IDKSLYVAE 472


>gi|14251212 DEAD (Asp-Glu-Ala-Asp) box polypeptide 20 [Homo
           sapiens]
          Length = 824

 Score =  229 bits (584), Expect = 4e-60
 Identities = 138/390 (35%), Positives = 203/390 (52%), Gaps = 11/390 (2%)

Query: 37  GSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKT 96
           G  +    + F   LL   +L  +   GFE PS VQ + IP    G+D++ QAKSG GKT
Sbjct: 54  GDVLLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLKAIPLGRCGLDLIVQAKSGTGKT 113

Query: 97  AVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKK 156
            VF    L  L        +L++  TRE+A QI          M  ++  VF GG  + +
Sbjct: 114 CVFSTIALDSLVLENLSTQILILAPTREIAVQIHSVITAIGIKMEGLECHVFIGGTPLSQ 173

Query: 157 DEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFR 216
           D+  LKK C HI VG+PGRI  L     LN   I+ FILDE DK+LE+   +  +  I+ 
Sbjct: 174 DKTRLKK-C-HIAVGSPGRIKQLIELDYLNPGSIRLFILDEADKLLEEGSFQEQINWIYS 231

Query: 217 MTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKD----- 271
             P  KQ++  SAT  + +     K+M+DP  + ++     +L GL+QYY  +       
Sbjct: 232 SLPASKQMLAVSATYPEFLANALTKYMRDPTFVRLNSSDP-SLIGLKQYYKVVNSYPLAH 290

Query: 272 ---NEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLS 328
               EK + L +L   + FNQ ++F     R   LA +L  + FPA  I   M Q +RL 
Sbjct: 291 KVFEEKTQHLQELFSRIPFNQALVFSNLHSRAQHLADILSSKGFPAECISGNMNQNQRLD 350

Query: 329 RYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAI 388
              + K F  R+L++T+L  RG+D E+VN+  N D+P D +TY+HR+ RAGRFGT GL +
Sbjct: 351 AMAKLKHFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWETYMHRIGRAGRFGTLGLTV 410

Query: 389 TFVSDENDAKILNDVQDRFEVNISELPDEI 418
           T+     +  ++  +  +  +N+  LPD I
Sbjct: 411 TYCCRGEEENMMMRIAQKCNINLLPLPDPI 440


>gi|20149629 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 1
           [Homo sapiens]
          Length = 455

 Score =  211 bits (538), Expect = 8e-55
 Identities = 125/374 (33%), Positives = 206/374 (55%), Gaps = 6/374 (1%)

Query: 47  FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 106
           F+D  +   L  A    G+  P+++Q E IP A+ G D++  A++G GKT  F L  L  
Sbjct: 26  FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNA 85

Query: 107 LEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCP 166
           L     ++  LV+  TRELAFQIS+++E     +  V+ AV  GG+        L K  P
Sbjct: 86  LLETPQRLFALVLTPTRELAFQISEQFEALGSSI-GVQSAVIVGGIDSMSQSLALAKK-P 143

Query: 167 HIVVGTPGRILA-LARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVM 225
           HI++ TPGR++  L   K  NL+ +K+ ++DE D++L  +D   +V +I ++ P +++  
Sbjct: 144 HIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRILN-MDFETEVDKILKVIPRDRKTF 202

Query: 226 MFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVL 285
           +FSAT++K+++ + R  +++P++  V  + + T+  LQQYY+ +    K+  L  +L+ L
Sbjct: 203 LFSATMTKKVQKLQRAALKNPVKCAVSSKYQ-TVEKLQQYYIFIPSKFKDTYLVYILNEL 261

Query: 286 EFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATN 345
             N  +IF  +       A LL    F AI +H  M Q +RL    +FK   R IL+AT+
Sbjct: 262 AGNSFMIFCSTCNNTQRTALLLRNLGFTAIPLHGQMSQSKRLGSLNKFKAKARSILLATD 321

Query: 346 LFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQD 405
           +  RG+DI  V++  N+D+P  S  Y+HRV R  R G  G AITFV+ + D ++   ++ 
Sbjct: 322 VASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVT-QYDVELFQRIEH 380

Query: 406 RFEVNISELPDEID 419
                +   P + D
Sbjct: 381 LIGKKLPGFPTQDD 394


>gi|6005743 DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 1 [Homo
           sapiens]
          Length = 479

 Score =  211 bits (537), Expect = 1e-54
 Identities = 131/399 (32%), Positives = 216/399 (54%), Gaps = 18/399 (4%)

Query: 32  KKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILG--MDVLCQA 89
           ++D      S+ S  F +  LKP+LL+ +   GF  PS++Q   +P  +     +++ Q+
Sbjct: 81  QRDPNSPLYSVKS--FEELRLKPQLLQGVYAMGFNRPSKIQENALPLMLAEPPQNLIAQS 138

Query: 90  KSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFF 149
           +SG GKTA FVLA L Q+EP       L +  T ELA Q  K  E+  K+ P +K+A   
Sbjct: 139 QSGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAV 198

Query: 150 GGLSIKKDEEVLKKNCPHIVVGTPGRILA-LARNKSLNLKHIKHFILDECDKMLEQLDMR 208
            G  +++ +++ ++    IV+GTPG +L   ++ K ++ K IK F+LDE D M+     +
Sbjct: 199 RGNKLERGQKISEQ----IVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQ 254

Query: 209 RDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVK 268
                I RM P   Q+++FSAT    +    +K + DP  I +  E + TL  ++QYYV 
Sbjct: 255 DQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEE-TLDTIKQYYVL 313

Query: 269 LKD-NEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERL 327
               +EK + L +L   +   Q +IF  + +    LA  L ++      +   M  E+R 
Sbjct: 314 CSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRA 373

Query: 328 SRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSD------TYLHRVARAGRF 381
           +  ++F++ + ++LV TN+  RG+D+E+V++  N+D+P D D      TYLHR+ R GRF
Sbjct: 374 AVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRF 433

Query: 382 GTKGLAITFVSDENDAKILNDVQDRFEVNISEL-PDEID 419
           G +GLA+  V  ++   ILN +Q+ F   I  L  D++D
Sbjct: 434 GKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLD 472


>gi|8922886 DDX19-like protein [Homo sapiens]
          Length = 478

 Score =  209 bits (532), Expect = 4e-54
 Identities = 130/399 (32%), Positives = 216/399 (54%), Gaps = 18/399 (4%)

Query: 32  KKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILG--MDVLCQA 89
           ++D      S+ S  F +  LKP+LL+ +   GF  PS++Q   +P  +     +++ Q+
Sbjct: 80  QRDPNSPLYSVKS--FEELRLKPQLLQGVYAMGFNRPSKIQENALPMMLAEPPQNLIAQS 137

Query: 90  KSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFF 149
           +SG GKTA FVLA L ++EP       L +  T ELA Q  K  E+  K+ P +K+A   
Sbjct: 138 QSGTGKTAAFVLAMLSRVEPSDRYPQCLCLSPTYELALQTGKVIEQMGKFYPELKLAYAV 197

Query: 150 GGLSIKKDEEVLKKNCPHIVVGTPGRILA-LARNKSLNLKHIKHFILDECDKMLEQLDMR 208
            G  +++ +++ ++    IV+GTPG +L   ++ K ++ K IK F+LDE D M+     +
Sbjct: 198 RGNKLERGQKISEQ----IVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEADVMIATQGHQ 253

Query: 209 RDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVK 268
                I RM P   Q+++FSAT    +    +K + DP  I +  E + TL  ++QYYV 
Sbjct: 254 DQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEE-TLDTIKQYYVL 312

Query: 269 LKD-NEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERL 327
               +EK + L +L   +   Q +IF  + +    LA  L ++      +   M  E+R 
Sbjct: 313 CSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLSGEMMVEQRA 372

Query: 328 SRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSD------TYLHRVARAGRF 381
           +  ++F++ + ++LV TN+  RG+D+E+V++  N+D+P D D      TYLHR+ R GRF
Sbjct: 373 AVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYLHRIGRTGRF 432

Query: 382 GTKGLAITFVSDENDAKILNDVQDRFEVNISEL-PDEID 419
           G +GLA+  V  ++   ILN +Q+ F   I  L  D++D
Sbjct: 433 GKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLD 471


>gi|62241022 DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 3
           [Homo sapiens]
          Length = 370

 Score =  198 bits (504), Expect = 7e-51
 Identities = 122/367 (33%), Positives = 200/367 (54%), Gaps = 16/367 (4%)

Query: 64  GFEHPSEVQHECIPQAILG--MDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCH 121
           GF  PS++Q   +P  +     +++ Q++SG GKTA FVLA L Q+EP       L +  
Sbjct: 2   GFNRPSKIQENALPLMLAEPPQNLIAQSQSGTGKTAAFVLAMLSQVEPANKYPQCLCLSP 61

Query: 122 TRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILA-LA 180
           T ELA Q  K  E+  K+ P +K+A    G  +++ +++ ++    IV+GTPG +L   +
Sbjct: 62  TYELALQTGKVIEQMGKFYPELKLAYAVRGNKLERGQKISEQ----IVIGTPGTVLDWCS 117

Query: 181 RNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCR 240
           + K ++ K IK F+LDE D M+     +     I RM P   Q+++FSAT    +    +
Sbjct: 118 KLKFIDPKKIKVFVLDEADVMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQ 177

Query: 241 KFMQDPMEIFVDDETKLTLHGLQQYYVKLKD-NEKNRKLFDLLDVLEFNQVVIFVKSVQR 299
           K + DP  I +  E + TL  ++QYYV     +EK + L +L   +   Q +IF  + + 
Sbjct: 178 KVVPDPNVIKLKREEE-TLDTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKT 236

Query: 300 CIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIA 359
              LA  L ++      +   M  E+R +  ++F++ + ++LV TN+  RG+D+E+V++ 
Sbjct: 237 ASWLAAELSKEGHQVALLSGEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVV 296

Query: 360 FNYDMPEDSD------TYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISE 413
            N+D+P D D      TYLHR+ R GRFG +GLA+  V  ++   ILN +Q+ F   I  
Sbjct: 297 INFDLPVDKDGNPDNETYLHRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIER 356

Query: 414 L-PDEID 419
           L  D++D
Sbjct: 357 LDTDDLD 363


>gi|224593278 DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Homo
           sapiens]
          Length = 796

 Score =  194 bits (493), Expect = 1e-49
 Identities = 122/367 (33%), Positives = 201/367 (54%), Gaps = 18/367 (4%)

Query: 47  FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 106
           F+D  L   LL+AI   GF+ P+ +Q  CIP  +LG D+   A +G GKTA F L  L++
Sbjct: 220 FQDMNLSRPLLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLER 279

Query: 107 L------EPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEV 160
           L       PVT    VLV+  TREL  Q+     + +++  N+   +  GGL +K  E  
Sbjct: 280 LIYKPRQAPVT---RVLVLVPTRELGIQVHSVTRQLAQFC-NITTCLAVGGLDVKSQEAA 335

Query: 161 LKKNCPHIVVGTPGRILALARN-KSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTP 219
           L+   P I++ TPGR++    N  S +L  I+  ILDE D+ML++      ++EI RM  
Sbjct: 336 LRA-APDILIATPGRLIDHLHNCPSFHLSSIEVLILDEADRMLDEY-FEEQMKEIIRMCS 393

Query: 220 HEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRK-- 277
           H +Q M+FSAT++ E++ +    +++P+ IFV+  T +    L+Q +++++ N +  +  
Sbjct: 394 HHRQTMLFSATMTDEVKDLASVSLKNPVRIFVNSNTDVAPF-LRQEFIRIRPNREGDREA 452

Query: 278 -LFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDF 336
            +  LL     + V++F ++ ++   +  LL         +H  + Q +RL   ++FKD 
Sbjct: 453 IVAALLTRTFTDHVMLFTQTKKQAHRMHILLGLMGLQVGELHGNLSQTQRLEALRRFKDE 512

Query: 337 QRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEND 396
           Q  ILVAT++  RG+DIE V    N+ MP     Y+HRV R  R G  G +++ V  E++
Sbjct: 513 QIDILVATDVAARGLDIEGVKTVINFTMPNTIKHYVHRVGRTARAGRAGRSVSLVG-EDE 571

Query: 397 AKILNDV 403
            K+L ++
Sbjct: 572 RKMLKEI 578


>gi|62241024 DEAD (Asp-Glu-Ala-As) box polypeptide 19 isoform 2
           [Homo sapiens]
          Length = 448

 Score =  190 bits (482), Expect = 2e-48
 Identities = 117/348 (33%), Positives = 191/348 (54%), Gaps = 14/348 (4%)

Query: 81  LGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYM 140
           L  +++ Q++SG GKTA FVLA L Q+EP       L +  T ELA Q  K  E+  K+ 
Sbjct: 99  LPQNLIAQSQSGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQTGKVIEQMGKFY 158

Query: 141 PNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILA-LARNKSLNLKHIKHFILDECD 199
           P +K+A    G  +++ +++ ++    IV+GTPG +L   ++ K ++ K IK F+LDE D
Sbjct: 159 PELKLAYAVRGNKLERGQKISEQ----IVIGTPGTVLDWCSKLKFIDPKKIKVFVLDEAD 214

Query: 200 KMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTL 259
            M+     +     I RM P   Q+++FSAT    +    +K + DP  I +  E + TL
Sbjct: 215 VMIATQGHQDQSIRIQRMLPRNCQMLLFSATFEDSVWKFAQKVVPDPNVIKLKREEE-TL 273

Query: 260 HGLQQYYVKLKD-NEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIH 318
             ++QYYV     +EK + L +L   +   Q +IF  + +    LA  L ++      + 
Sbjct: 274 DTIKQYYVLCSSRDEKFQALCNLYGAITIAQAMIFCHTRKTASWLAAELSKEGHQVALLS 333

Query: 319 RGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSD------TYL 372
             M  E+R +  ++F++ + ++LV TN+  RG+D+E+V++  N+D+P D D      TYL
Sbjct: 334 GEMMVEQRAAVIERFREGKEKVLVTTNVCARGIDVEQVSVVINFDLPVDKDGNPDNETYL 393

Query: 373 HRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISEL-PDEID 419
           HR+ R GRFG +GLA+  V  ++   ILN +Q+ F   I  L  D++D
Sbjct: 394 HRIGRTGRFGKRGLAVNMVDSKHSMNILNRIQEHFNKKIERLDTDDLD 441


>gi|164419732 DEAD (Asp-Glu-Ala-Asp) box polypeptide 25 [Homo
           sapiens]
          Length = 483

 Score =  187 bits (475), Expect = 2e-47
 Identities = 124/406 (30%), Positives = 211/406 (51%), Gaps = 22/406 (5%)

Query: 32  KKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILG--MDVLCQA 89
           +KD      S+ +  F +  LK ELL+ I   GF  PS++Q   +P  +     +++ Q+
Sbjct: 86  QKDPSSPLYSVKT--FEELRLKEELLKGIYAMGFNRPSKIQEMALPMMLAHPPQNLIAQS 143

Query: 90  KSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFF 149
           +SG GKTA FVLA L ++  +      L +  T ELA Q  +  E+  K+  +V+V    
Sbjct: 144 QSGTGKTAAFVLAMLSRVNALELFPQCLCLAPTYELALQTGRVVEQMGKFCVDVQVMYAI 203

Query: 150 GGLSIKKDEEVLKKNCPHIVVGTPGRILALA-RNKSLNLKHIKHFILDECDKMLEQLDMR 208
            G  I +  ++ K+    I++GTPG +L    + K ++L  I+ F+LDE D M++     
Sbjct: 204 RGNRIPRGTDITKQ----IIIGTPGTVLDWCFKLKLIDLTKIRVFVLDEADVMIDTQGFS 259

Query: 209 RDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVK 268
                I R  P E Q+++FSAT    +     + + DP  I +  E +LTL+ ++QYYV 
Sbjct: 260 DHSIRIQRALPSECQMLLFSATFEDSVWHFAERIIPDPNVIKLRKE-ELTLNNIRQYYVL 318

Query: 269 LKD-NEKNRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERL 327
            +   +K + L ++   +   Q +IF ++ +    L   +++       +   +  E+R 
Sbjct: 319 CEHRKDKYQALCNIYGSITIGQAIIFCQTRRNAKWLTVEMIQDGHQVSLLSGELTVEQRA 378

Query: 328 SRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMP------EDSDTYLHRVARAGRF 381
           S  Q+F+D + ++L+ TN+  RG+D+++V I  N+D+P       D +TYLHR+ R GRF
Sbjct: 379 SIIQRFRDGKEKVLITTNVCARGIDVKQVTIVVNFDLPVKQGEEPDYETYLHRIGRTGRF 438

Query: 382 GTKGLAITFVSDENDAKILNDVQDRFEVNISEL----PDEIDISSY 423
           G KGLA   + + ++   L  +QD F  +I +L     DEI+   Y
Sbjct: 439 GKKGLAFNMI-EVDELPSLMKIQDHFNSSIKQLNAEDMDEIEKIDY 483


>gi|31542656 DEAD (Asp-Glu-Ala-Asp) box polypeptide 49 [Homo
           sapiens]
          Length = 483

 Score =  187 bits (475), Expect = 2e-47
 Identities = 121/381 (31%), Positives = 203/381 (53%), Gaps = 13/381 (3%)

Query: 45  SGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATL 104
           +GF +  L   L+      G + P+ VQ  CIP  + G D L  AK+G GKTA FVL  L
Sbjct: 2   AGFAELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPIL 61

Query: 105 QQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKN 164
           Q+L      +  LV+  TRELA+QI++++    K +  +K  +  GG+ +      L + 
Sbjct: 62  QKLSEDPYGIFCLVLTPTRELAYQIAEQFRVLGKPL-GLKDCIIVGGMDMVAQALELSRK 120

Query: 165 CPHIVVGTPGRILA-LARNKSLNLKHIKHFILDECDKMLEQ--LDMRRDVQEIFRMTPHE 221
            PH+V+ TPGR+   L  + + ++K I+  ++DE D++LEQ   D   D++ I    P  
Sbjct: 121 -PHVVIATPGRLADHLRSSNTFSIKKIRFLVMDEADRLLEQGCTDFTVDLEAILAAVPAR 179

Query: 222 KQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKL-TLHGLQQYYVKLKDNEKNRKLFD 280
           +Q ++FSATL+  +R +       P   F + +  + T+  L Q Y+ + +  K+  L  
Sbjct: 180 RQTLLFSATLTDTLRELQGLATNQPF--FWEAQAPVSTVEQLDQRYLLVPEKVKDAYLVH 237

Query: 281 LL----DVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDF 336
           L+    D  E   ++IF  + + C  L  +L + +FP +A+H  M Q+ER +   +FK  
Sbjct: 238 LIQRFQDEHEDWSIIIFTNTCKTCQILCMMLRKFSFPTVALHSMMKQKERFAALAKFKSS 297

Query: 337 QRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEND 396
             RIL+AT++  RG+DI  V +  N++ P     Y+HRV R  R G +G AIT V+ + D
Sbjct: 298 IYRILIATDVASRGLDIPTVQVVINHNTPGLPKIYIHRVGRTARAGRQGQAITLVT-QYD 356

Query: 397 AKILNDVQDRFEVNISELPDE 417
             +++ ++++ +  + E   E
Sbjct: 357 IHLVHAIEEQIKKKLEEFSVE 377


>gi|41327771 DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo
           sapiens]
          Length = 820

 Score =  186 bits (473), Expect = 3e-47
 Identities = 120/418 (28%), Positives = 208/418 (49%), Gaps = 39/418 (9%)

Query: 36  KGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGK 95
           KG  +      ++D  L P +L  I  CG++ P+ +Q + IP  +   D++  A++G GK
Sbjct: 382 KGGKIPNPIRSWKDSSLPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGK 441

Query: 96  TAVFVLATL---------QQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVA 146
           TA F++  L          ++E        +++  TRELA QI +E  +F K +  ++  
Sbjct: 442 TAAFLIPLLVWITTLPKIDRIEESDQGPYAIILAPTRELAQQIEEETIKFGKPL-GIRTV 500

Query: 147 VFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLD 206
              GG+S +     L+  C  IV+ TPGR++ +  N+ L L    + +LDE D+M++ + 
Sbjct: 501 AVIGGISREDQGFRLRMGC-EIVIATPGRLIDVLENRYLVLSRCTYVVLDEADRMID-MG 558

Query: 207 MRRDVQEIFRMTP-------------------------HE-KQVMMFSATLSKEIRPVCR 240
              DVQ+I    P                         H+ +Q +MF+AT+   +  + R
Sbjct: 559 FEPDVQKILEHMPVSNQKPDTDEAEDPEKMLANFESGKHKYRQTVMFTATMPPAVERLAR 618

Query: 241 KFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQVVIFVKSVQRC 300
            +++ P  +++    K     ++Q    + ++EK +KL  +L+      ++IFV   + C
Sbjct: 619 SYLRRPAVVYIGSAGK-PHERVEQKVFLMSESEKRKKLLAILEQGFDPPIIIFVNQKKGC 677

Query: 301 IALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAF 360
             LA+ L +  + A  +H G  QE+R       K   + ILVAT++ GRG+DI+ V++  
Sbjct: 678 DVLAKSLEKMGYNACTLHGGKGQEQREFALSNLKAGAKDILVATDVAGRGIDIQDVSMVV 737

Query: 361 NYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEI 418
           NYDM ++ + Y+HR+ R GR G  G+AITF++ E+ A      Q   E  +S  P E+
Sbjct: 738 NYDMAKNIEDYIHRIGRTGRAGKSGVAITFLTKEDSAVFYELKQAILESPVSSCPPEL 795


>gi|41327773 DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo
           sapiens]
          Length = 1031

 Score =  185 bits (470), Expect = 6e-47
 Identities = 115/375 (30%), Positives = 206/375 (54%), Gaps = 16/375 (4%)

Query: 55  ELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ------LE 108
           ++L ++   G+E P+ +Q + IP  + G D++  AK+G GKT  F+L   +       LE
Sbjct: 382 KILNSLKKHGYEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSLE 441

Query: 109 PVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHI 168
              G ++V +M  TRELA QI+KE ++FSK +  ++V   +GG  I +    LK+    I
Sbjct: 442 EGEGPIAV-IMTPTRELALQITKECKKFSKTL-GLRVVCVYGGTGISEQIAELKRGA-EI 498

Query: 169 VVGTPGRI---LALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVM 225
           +V TPGR+   LA    +  NL+ + + +LDE D+M + +     V  I      ++Q +
Sbjct: 499 IVCTPGRMIDMLAANSGRVTNLRRVTYVVLDEADRMFD-MGFEPQVMRIVDNVRPDRQTV 557

Query: 226 MFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLD-V 284
           MFSAT  + +  + R+ +  P+E+ V   + +    ++Q  + +++ +K  KL +LL   
Sbjct: 558 MFSATFPRAMEALARRILSKPIEVQVGGRS-VVCSDVEQQVIVIEEEKKFLKLLELLGHY 616

Query: 285 LEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVAT 344
            E   V+IFV   +    L + L+  ++P +++H G+ Q +R S    FK+   ++LVAT
Sbjct: 617 QESGSVIIFVDKQEHADGLLKDLMRASYPCMSLHGGIDQYDRDSIINDFKNGTCKLLVAT 676

Query: 345 NLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQ 404
           ++  RG+D++ + +  NY  P   + Y+HR  R GR G KG A TF++ E+ A+   D+ 
Sbjct: 677 SVAARGLDVKHLILVVNYSCPNHYEDYVHRAGRTGRAGNKGYAYTFIT-EDQARYAGDII 735

Query: 405 DRFEVNISELPDEID 419
              E++ + +P +++
Sbjct: 736 KALELSGTAVPPDLE 750


>gi|21071032 DEAD-box protein abstrakt [Homo sapiens]
          Length = 622

 Score =  179 bits (455), Expect = 3e-45
 Identities = 114/386 (29%), Positives = 206/386 (53%), Gaps = 23/386 (5%)

Query: 35  VKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMG 94
           V+G  +      F++      +LR +   G  HP+ +Q + IP  + G D++  A +G G
Sbjct: 171 VEGDGIPPPIKSFKEMKFPAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSG 230

Query: 95  KTAVFVLATL------QQLEPVTGQVSV--LVMCHTRELAFQISKEYERFSKYM-----P 141
           KT VF L  +      ++  P + +     L++C +RELA Q     E + + +     P
Sbjct: 231 KTLVFTLPVIMFCLEQEKRLPFSKREGPYGLIICPSRELARQTHGILEYYCRLLQEDSSP 290

Query: 142 NVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKM 201
            ++ A+  GG+S+K+  E ++    H++V TPGR++ L + K ++L   ++  LDE D+M
Sbjct: 291 LLRCALCIGGMSVKEQMETIRHGV-HMMVATPGRLMDLLQKKMVSLDICRYLALDEADRM 349

Query: 202 LEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHG 261
           ++ +    D++ IF     ++Q ++FSAT+ K+I+   +  +  P+ I V      +L  
Sbjct: 350 ID-MGFEGDIRTIFSYFKGQRQTLLFSATMPKKIQNFAKSALVKPVTINVGRAGAASLDV 408

Query: 262 LQQY-YVKLKDNEKNRKLFDLLDVLEFNQ--VVIFVKSVQRCIALAQLLVEQNFPAIAIH 318
           +Q+  YVK     +  K+  LL+ L+     V+IF +      A+ + L+ +   A+AIH
Sbjct: 409 IQEVEYVK-----EEAKMVYLLECLQKTPPPVLIFAEKKADVDAIHEYLLLKGVEAVAIH 463

Query: 319 RGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARA 378
            G  QEER    + F++ ++ +LVAT++  +G+D   +    NYDMPE+ + Y+HR+ R 
Sbjct: 464 GGKDQEERTKAIEAFREGKKDVLVATDVASKGLDFPAIQHVINYDMPEEIENYVHRIGRT 523

Query: 379 GRFGTKGLAITFVSDENDAKILNDVQ 404
           GR G  G+A TF++   D  +L D++
Sbjct: 524 GRSGNTGIATTFINKACDESVLMDLK 549


>gi|188035877 DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 [Homo
           sapiens]
          Length = 619

 Score =  179 bits (455), Expect = 3e-45
 Identities = 120/426 (28%), Positives = 218/426 (51%), Gaps = 21/426 (4%)

Query: 10  LLDYEDDEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPS 69
           +L+ ++D++E      G        V+G  V+     F    L   L   +   G+E P+
Sbjct: 174 ILNLQEDQIENLKQQLGIL------VQGQEVTRPIIDFEHCSLPEVLNHNLKKSGYEVPT 227

Query: 70  EVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQI 129
            +Q + IP  +LG D+L  A +G GKTA F+L  + +    +   S L++  TRELA QI
Sbjct: 228 PIQMQMIPVGLLGRDILASADTGSGKTAAFLLPVIMRALFESKTPSALILTPTRELAIQI 287

Query: 130 SKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKH 189
            ++ +     +P +K  +  GGL +      L+++   +++ TPGR+L + +  S+ L  
Sbjct: 288 ERQAKELMSGLPRMKTVLLVGGLPLPPQLYRLQQHV-KVIIATPGRLLDIIKQSSVELCG 346

Query: 190 IKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEI 249
           +K  ++DE D ML ++  ++ V +I    P++ Q ++ SAT+   I  +  + + +P+ I
Sbjct: 347 VKIVVVDEADTML-KMGFQQQVLDILENIPNDCQTILVSATIPTSIEQLASQLLHNPVRI 405

Query: 250 FVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVLEFNQ--VVIFVKSVQRCIALAQLL 307
            +  E  L    ++Q  + ++D  K +KLF++L+  +  +  V++FV     C   A LL
Sbjct: 406 -ITGEKNLPCANVRQIILWVEDPAKKKKLFEILNDKKLFKPPVLVFVD----CKLGADLL 460

Query: 308 VE-----QNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNY 362
            E         +I+IH    Q ER +  +   +    ++V+T + GRG+D+  V +  N+
Sbjct: 461 SEAVQKITGLKSISIHSEKSQIERKNILKGLLEGDYEVVVSTGVLGRGLDLISVRLVVNF 520

Query: 363 DMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQDRFEVNISELPDEIDISS 422
           DMP   D Y+H++ R GR G  G AITF+++ N  ++  D+  R +   S LP ++  S 
Sbjct: 521 DMPSSMDEYVHQIGRVGRLGQNGTAITFINN-NSKRLFWDIAKRVKPTGSILPPQLLNSP 579

Query: 423 YIEQTR 428
           Y+   +
Sbjct: 580 YLHDQK 585


>gi|41327776 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 isoform 2
           [Homo sapiens]
          Length = 406

 Score =  172 bits (436), Expect = 5e-43
 Identities = 110/374 (29%), Positives = 187/374 (50%), Gaps = 55/374 (14%)

Query: 47  FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 106
           F+D  +   L  A    G+  P+++Q E IP A+ G D++  A++G GKT  F L  L  
Sbjct: 26  FKDLGVTDVLCEACDQLGWTKPTKIQIEAIPLALQGRDIIGLAETGSGKTGAFALPILNA 85

Query: 107 LEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCP 166
           L     ++  LV+  TRELAFQIS+++E     +  V+ AV  GG+        L K  P
Sbjct: 86  LLETPQRLFALVLTPTRELAFQISEQFEALGSSI-GVQSAVIVGGIDSMSQSLALAKK-P 143

Query: 167 HIVVGTPGRIL-ALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVM 225
           HI++ TPGR++  L   K  NL+ +K+ ++DE D++L  +D   +V +I ++ P +++  
Sbjct: 144 HIIIATPGRLIDHLENTKGFNLRALKYLVMDEADRIL-NMDFETEVDKILKVIPRDRKTF 202

Query: 226 MFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVL 285
           +FSAT++K+++ + R  +++P++  V  + + T+  LQQYY+ +    K+++L  L    
Sbjct: 203 LFSATMTKKVQKLQRAALKNPVKCAVSSKYQ-TVEKLQQYYIFIPSKFKSKRLGSL---- 257

Query: 286 EFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATN 345
                                                         +FK   R IL+AT+
Sbjct: 258 ---------------------------------------------NKFKAKARSILLATD 272

Query: 346 LFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKILNDVQD 405
           +  RG+DI  V++  N+D+P  S  Y+HRV R  R G  G AITFV+ + D ++   ++ 
Sbjct: 273 VASRGLDIPHVDVVVNFDIPTHSKDYIHRVGRTARAGRSGKAITFVT-QYDVELFQRIEH 331

Query: 406 RFEVNISELPDEID 419
                +   P + D
Sbjct: 332 LIGKKLPGFPTQDD 345


>gi|169881239 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
           [Homo sapiens]
          Length = 660

 Score =  171 bits (433), Expect = 1e-42
 Identities = 133/448 (29%), Positives = 212/448 (47%), Gaps = 31/448 (6%)

Query: 3   ENDVDNELLDYEDDEVETAAGGDGAEAPAKKD-----VKGSYVSIHSSGFRDFLLKPELL 57
           E+D    L   E  E E  +GG+      K D       GS    H   F D  +   ++
Sbjct: 131 EDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGSNCPPHIENFSDIDMGEIIM 190

Query: 58  RAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLE---PVTGQV 114
             I    +  P+ VQ   IP      D++  A++G GKTA F+L  L Q+    P     
Sbjct: 191 GNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALK 250

Query: 115 SV---------------LVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEE 159
           +V               LV+  TRELA QI +E  +FS Y   V+  V +GG  I +   
Sbjct: 251 AVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFS-YRSRVRPCVVYGGADIGQQIR 309

Query: 160 VLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLE---QLDMRRDVQEIFR 216
            L++ C H++V TPGR++ +     + L   K+ +LDE D+ML+   +  +RR V++   
Sbjct: 310 DLERGC-HLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTM 368

Query: 217 MTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNR 276
                +  MMFSAT  KEI+ + R F+ + + + V      T   + Q  V ++D +K  
Sbjct: 369 PPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVG-RVGSTSENITQKVVWVEDLDKRS 427

Query: 277 KLFDLLDVLEFNQV-VIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKD 335
            L D+L     + + ++FV++ +   +L   L  + +   +IH    Q +R     QF+ 
Sbjct: 428 FLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRS 487

Query: 336 FQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEN 395
            +  ILVAT +  RG+DI  V    N+D+P D + Y+HR+ R GR G  GLA +F +++N
Sbjct: 488 GKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKN 547

Query: 396 DAKILNDVQDRFEVNISELPDEIDISSY 423
              I  D+ D       E+P  ++  +Y
Sbjct: 548 -MNITKDLLDLLVEAKQEVPSWLENMAY 574


>gi|13514809 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3, Y-linked
           [Homo sapiens]
          Length = 660

 Score =  171 bits (433), Expect = 1e-42
 Identities = 133/448 (29%), Positives = 212/448 (47%), Gaps = 31/448 (6%)

Query: 3   ENDVDNELLDYEDDEVETAAGGDGAEAPAKKD-----VKGSYVSIHSSGFRDFLLKPELL 57
           E+D    L   E  E E  +GG+      K D       GS    H   F D  +   ++
Sbjct: 131 EDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGSNCPPHIENFSDIDMGEIIM 190

Query: 58  RAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLE---PVTGQV 114
             I    +  P+ VQ   IP      D++  A++G GKTA F+L  L Q+    P     
Sbjct: 191 GNIELTRYTRPTPVQKHAIPIIKGKRDLMACAQTGSGKTAAFLLPILSQIYTDGPGEALK 250

Query: 115 SV---------------LVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEE 159
           +V               LV+  TRELA QI +E  +FS Y   V+  V +GG  I +   
Sbjct: 251 AVKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFS-YRSRVRPCVVYGGADIGQQIR 309

Query: 160 VLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLE---QLDMRRDVQEIFR 216
            L++ C H++V TPGR++ +     + L   K+ +LDE D+ML+   +  +RR V++   
Sbjct: 310 DLERGC-HLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTM 368

Query: 217 MTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNR 276
                +  MMFSAT  KEI+ + R F+ + + + V      T   + Q  V ++D +K  
Sbjct: 369 PPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVG-RVGSTSENITQKVVWVEDLDKRS 427

Query: 277 KLFDLLDVLEFNQV-VIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKD 335
            L D+L     + + ++FV++ +   +L   L  + +   +IH    Q +R     QF+ 
Sbjct: 428 FLLDILGATGSDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRS 487

Query: 336 FQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEN 395
            +  ILVAT +  RG+DI  V    N+D+P D + Y+HR+ R GR G  GLA +F +++N
Sbjct: 488 GKSPILVATAVAARGLDISNVRHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNEKN 547

Query: 396 DAKILNDVQDRFEVNISELPDEIDISSY 423
              I  D+ D       E+P  ++  +Y
Sbjct: 548 -MNITKDLLDLLVEAKQEVPSWLENMAY 574


>gi|87196351 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3 [Homo
           sapiens]
          Length = 662

 Score =  170 bits (431), Expect = 2e-42
 Identities = 131/448 (29%), Positives = 212/448 (47%), Gaps = 31/448 (6%)

Query: 3   ENDVDNELLDYEDDEVETAAGGDGAEAPAKKD-----VKGSYVSIHSSGFRDFLLKPELL 57
           E+D    L   E  E E  +GG+      K D       G+    H   F D  +   ++
Sbjct: 133 EDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPHIESFSDVEMGEIIM 192

Query: 58  RAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQL------EPVT 111
             I    +  P+ VQ   IP      D++  A++G GKTA F+L  L Q+      E + 
Sbjct: 193 GNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQIYSDGPGEALR 252

Query: 112 GQVS------------VLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEE 159
                            LV+  TRELA QI +E  +FS Y   V+  V +GG  I +   
Sbjct: 253 AMKENGRYGRRKQYPISLVLAPTRELAVQIYEEARKFS-YRSRVRPCVVYGGADIGQQIR 311

Query: 160 VLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLE---QLDMRRDVQEIFR 216
            L++ C H++V TPGR++ +     + L   K+ +LDE D+ML+   +  +RR V++   
Sbjct: 312 DLERGC-HLLVATPGRLVDMMERGKIGLDFCKYLVLDEADRMLDMGFEPQIRRIVEQDTM 370

Query: 217 MTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNR 276
                +  MMFSAT  KEI+ + R F+ + + + V      T   + Q  V +++++K  
Sbjct: 371 PPKGVRHTMMFSATFPKEIQMLARDFLDEYIFLAVG-RVGSTSENITQKVVWVEESDKRS 429

Query: 277 KLFDLLDVLEFNQV-VIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKD 335
            L DLL+    + + ++FV++ +   +L   L  + +   +IH    Q +R     QF+ 
Sbjct: 430 FLLDLLNATGKDSLTLVFVETKKGADSLEDFLYHEGYACTSIHGDRSQRDREEALHQFRS 489

Query: 336 FQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEN 395
            +  ILVAT +  RG+DI  V    N+D+P D + Y+HR+ R GR G  GLA +F ++ N
Sbjct: 490 GKSPILVATAVAARGLDISNVKHVINFDLPSDIEEYVHRIGRTGRVGNLGLATSFFNERN 549

Query: 396 DAKILNDVQDRFEVNISELPDEIDISSY 423
              I  D+ D       E+P  ++  +Y
Sbjct: 550 -INITKDLLDLLVEAKQEVPSWLENMAY 576


>gi|148613856 DEAD box polypeptide 17 isoform 3 [Homo sapiens]
          Length = 731

 Score =  167 bits (423), Expect = 2e-41
 Identities = 115/400 (28%), Positives = 196/400 (49%), Gaps = 31/400 (7%)

Query: 10  LLDYEDDEVE-----TAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCG 64
           L  YE DE+      T  GGD    P          + H + F  +++       ++D  
Sbjct: 144 LTPYEVDELRRKKEITVRGGDVCPKPV--------FAFHHANFPQYVMD-----VLMDQH 190

Query: 65  FEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ------LEPVTGQVSVLV 118
           F  P+ +Q +  P A+ G D++  A++G GKT  ++L  +        LE   G +  LV
Sbjct: 191 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPIC-LV 249

Query: 119 MCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILA 178
           +  TRELA Q+ +  + + K    +K    +GG         L++    I + TPGR++ 
Sbjct: 250 LAPTRELAQQVQQVADDYGK-CSRLKSTCIYGGAPKGPQIRDLERGV-EICIATPGRLID 307

Query: 179 LARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPV 238
              +   NL+   + +LDE D+ML+ +     +++I      ++Q +M+SAT  KE+R +
Sbjct: 308 FLESGKTNLRRCTYLVLDEADRMLD-MGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQL 366

Query: 239 CRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVL---EFNQVVIFVK 295
              F++D  +I V +      H + Q      ++EK+ KL  L++ +   + N+ +IFV+
Sbjct: 367 AEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVE 426

Query: 296 SVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIER 355
           + +RC  L + +    +PA+ IH    Q ER     +F+  +  IL+AT++  RG+D+E 
Sbjct: 427 TKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVED 486

Query: 356 VNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEN 395
           V    NYD P  S+ Y+HR+ R  R   KG A TF +  N
Sbjct: 487 VKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGN 526


>gi|38201710 DEAD box polypeptide 17 isoform 1 [Homo sapiens]
          Length = 729

 Score =  167 bits (423), Expect = 2e-41
 Identities = 115/400 (28%), Positives = 196/400 (49%), Gaps = 31/400 (7%)

Query: 10  LLDYEDDEVE-----TAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCG 64
           L  YE DE+      T  GGD    P          + H + F  +++       ++D  
Sbjct: 144 LTPYEVDELRRKKEITVRGGDVCPKPV--------FAFHHANFPQYVMD-----VLMDQH 190

Query: 65  FEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ------LEPVTGQVSVLV 118
           F  P+ +Q +  P A+ G D++  A++G GKT  ++L  +        LE   G +  LV
Sbjct: 191 FTEPTPIQCQGFPLALSGRDMVGIAQTGSGKTLAYLLPAIVHINHQPYLERGDGPIC-LV 249

Query: 119 MCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILA 178
           +  TRELA Q+ +  + + K    +K    +GG         L++    I + TPGR++ 
Sbjct: 250 LAPTRELAQQVQQVADDYGK-CSRLKSTCIYGGAPKGPQIRDLERGV-EICIATPGRLID 307

Query: 179 LARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSATLSKEIRPV 238
              +   NL+   + +LDE D+ML+ +     +++I      ++Q +M+SAT  KE+R +
Sbjct: 308 FLESGKTNLRRCTYLVLDEADRMLD-MGFEPQIRKIVDQIRPDRQTLMWSATWPKEVRQL 366

Query: 239 CRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDLLDVL---EFNQVVIFVK 295
              F++D  +I V +      H + Q      ++EK+ KL  L++ +   + N+ +IFV+
Sbjct: 367 AEDFLRDYTQINVGNLELSANHNILQIVDVCMESEKDHKLIQLMEEIMAEKENKTIIFVE 426

Query: 296 SVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRILVATNLFGRGMDIER 355
           + +RC  L + +    +PA+ IH    Q ER     +F+  +  IL+AT++  RG+D+E 
Sbjct: 427 TKRRCDDLTRRMRRDGWPAMCIHGDKSQPERDWVLNEFRSGKAPILIATDVASRGLDVED 486

Query: 356 VNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDEN 395
           V    NYD P  S+ Y+HR+ R  R   KG A TF +  N
Sbjct: 487 VKFVINYDYPNSSEDYVHRIGRTARSTNKGTAYTFFTPGN 526


>gi|45446747 DEAD box polypeptide 42 protein [Homo sapiens]
          Length = 938

 Score =  165 bits (418), Expect = 6e-41
 Identities = 115/381 (30%), Positives = 186/381 (48%), Gaps = 12/381 (3%)

Query: 35  VKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMG 94
           V G+      S F  F    +L+  I    +  P+ +Q + +P A+ G D++  AK+G G
Sbjct: 243 VSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSG 302

Query: 95  KTAVFVLATL------QQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVF 148
           KTA F+   L      ++LEP  G ++V+V C TREL  QI  E +RF K   N++    
Sbjct: 303 KTAAFIWPMLIHIMDQKELEPGDGPIAVIV-CPTRELCQQIHAECKRFGKAY-NLRSVAV 360

Query: 149 FGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMR 208
           +GG S+ +  + L++    IVV TPGR++   + K+ NL+ + + + DE D+M + +   
Sbjct: 361 YGGGSMWEQAKALQEGA-EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFD-MGFE 418

Query: 209 RDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVK 268
             V+ I      ++Q ++FSAT  K+I  + R  + DP+ +   D  +      Q   + 
Sbjct: 419 YQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEIL 478

Query: 269 LKDNEK-NRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERL 327
                K N     L++      V++FV        LA  L ++      +H  M Q ER 
Sbjct: 479 HSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERN 538

Query: 328 SRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLA 387
                FK     +LVAT++  RG+DI  +    NYD+  D DT+ HR+ R GR G KG+A
Sbjct: 539 KVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVA 598

Query: 388 ITFVSDENDAKILNDVQDRFE 408
            T ++ + D+    D+    E
Sbjct: 599 YTLLTPK-DSNFAGDLVRNLE 618


>gi|45446743 DEAD box polypeptide 42 protein [Homo sapiens]
          Length = 938

 Score =  165 bits (418), Expect = 6e-41
 Identities = 115/381 (30%), Positives = 186/381 (48%), Gaps = 12/381 (3%)

Query: 35  VKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMG 94
           V G+      S F  F    +L+  I    +  P+ +Q + +P A+ G D++  AK+G G
Sbjct: 243 VSGAAPPRPGSSFAHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSG 302

Query: 95  KTAVFVLATL------QQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVF 148
           KTA F+   L      ++LEP  G ++V+V C TREL  QI  E +RF K   N++    
Sbjct: 303 KTAAFIWPMLIHIMDQKELEPGDGPIAVIV-CPTRELCQQIHAECKRFGKAY-NLRSVAV 360

Query: 149 FGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMR 208
           +GG S+ +  + L++    IVV TPGR++   + K+ NL+ + + + DE D+M + +   
Sbjct: 361 YGGGSMWEQAKALQEGA-EIVVCTPGRLIDHVKKKATNLQRVSYLVFDEADRMFD-MGFE 418

Query: 209 RDVQEIFRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVK 268
             V+ I      ++Q ++FSAT  K+I  + R  + DP+ +   D  +      Q   + 
Sbjct: 419 YQVRSIASHVRPDRQTLLFSATFRKKIEKLARDILIDPIRVVQGDIGEANEDVTQIVEIL 478

Query: 269 LKDNEK-NRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERL 327
                K N     L++      V++FV        LA  L ++      +H  M Q ER 
Sbjct: 479 HSGPSKWNWLTRRLVEFTSSGSVLLFVTKKANAEELANNLKQEGHNLGLLHGDMDQSERN 538

Query: 328 SRYQQFKDFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLA 387
                FK     +LVAT++  RG+DI  +    NYD+  D DT+ HR+ R GR G KG+A
Sbjct: 539 KVISDFKKKDIPVLVATDVAARGLDIPSIKTVINYDVARDIDTHTHRIGRTGRAGEKGVA 598

Query: 388 ITFVSDENDAKILNDVQDRFE 408
            T ++ + D+    D+    E
Sbjct: 599 YTLLTPK-DSNFAGDLVRNLE 618


>gi|222352149 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43 [Homo
           sapiens]
          Length = 648

 Score =  163 bits (413), Expect = 2e-40
 Identities = 107/378 (28%), Positives = 198/378 (52%), Gaps = 16/378 (4%)

Query: 50  FLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFV------LAT 103
           F   PE++  I   GF+ P+ +Q +  P  + G+D++  A++G GKT  ++      L  
Sbjct: 247 FQCYPEVMENIKKAGFQKPTPIQSQAWPIVLQGIDLIGVAQTGTGKTLCYLMPGFIHLVL 306

Query: 104 LQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEV--L 161
              L+    +  +LV+  TRELA Q+  E  ++S Y     V V+ GG    +DE++  L
Sbjct: 307 QPSLKGQRNRPGMLVLTPTRELALQVEGECCKYS-YKGLRSVCVYGGG---NRDEQIEEL 362

Query: 162 KKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHE 221
           KK    I++ TPGR+  L  +  +NLK+I + +LDE DKML+ +     + +I      +
Sbjct: 363 KKGVD-IIIATPGRLNDLQMSNFVNLKNITYLVLDEADKMLD-MGFEPQIMKILLDVRPD 420

Query: 222 KQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEKNRKLFDL 281
           +Q +M SAT    +  + + ++++PM ++V     + +  ++Q  +   + EK   +   
Sbjct: 421 RQTVMTSATWPHSVHRLAQSYLKEPMIVYVGTLDLVAVSSVKQNIIVTTEEEKWSHMQTF 480

Query: 282 LDVLEF-NQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFKDFQRRI 340
           L  +   ++V++FV        L+  L+  N    ++H    Q +R    + FK  + RI
Sbjct: 481 LQSMSSTDKVIVFVSRKAVADHLSSDLILGNISVESLHGDREQRDREKALENFKTGKVRI 540

Query: 341 LVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDENDAKIL 400
           L+AT+L  RG+D+  V   +N+D P + + Y+HR+ R GR G  G++IT ++  ND ++ 
Sbjct: 541 LIATDLASRGLDVHDVTHVYNFDFPRNIEEYVHRIGRTGRAGRTGVSITTLT-RNDWRVA 599

Query: 401 NDVQDRFEVNISELPDEI 418
           +++ +  E     +P+E+
Sbjct: 600 SELINILERANQSIPEEL 617


>gi|209862869 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 isoform 3
           [Homo sapiens]
          Length = 724

 Score =  162 bits (410), Expect = 5e-40
 Identities = 112/397 (28%), Positives = 196/397 (49%), Gaps = 25/397 (6%)

Query: 47  FRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQ 106
           F +  L   L   I   G+   + VQ   IP  + G D++  A++G GKTA F+L  L  
Sbjct: 290 FEEANLCQTLNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTGSGKTAAFLLPILAH 349

Query: 107 L--EPVTG-------QVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKD 157
           +  + +T        +   +++  TREL  QI  E  +FS +   V+  V +GG  +   
Sbjct: 350 MMHDGITASRFKELQEPECIIVAPTRELVNQIYLEARKFS-FGTCVRAVVIYGGTQLGHS 408

Query: 158 EEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQ---LDMRRDVQEI 214
              + + C +I+  TPGR++ +   + + LK IK+ +LDE D+ML+     +M++ +   
Sbjct: 409 IRQIVQGC-NILCATPGRLMDIIGKEKIGLKQIKYLVLDEADRMLDMGFGPEMKKLISCP 467

Query: 215 FRMTPHEKQVMMFSATLSKEIRPVCRKFMQDPMEIFVDDETKLTLHGLQQYYVKLKDNEK 274
              +  ++Q +MFSAT  +EI+ +  +F++         +       +QQ  +++    K
Sbjct: 468 GMPSKEQRQTLMFSATFPEEIQRLAAEFLKSNYLFVAVGQVGGACRDVQQTVLQVGQFSK 527

Query: 275 NRKLFDLLDVLEFNQVVIFVKSVQRCIALAQLLVEQNFPAIAIHRGMPQEERLSRYQQFK 334
             KL ++L  +   + ++FV++ ++   +A  L ++     +IH    Q ER      F+
Sbjct: 528 REKLVEILRNIGDERTMVFVETKKKADFIATFLCQEKISTTSIHGDREQREREQALGDFR 587

Query: 335 DFQRRILVATNLFGRGMDIERVNIAFNYDMPEDSDTYLHRVARAGRFGTKGLAITFVSDE 394
             +  +LVAT++  RG+DIE V    N+D+P   D Y+HR+ R GR G  G AI+F   E
Sbjct: 588 FGKCPVLVATSVAARGLDIENVQHVINFDLPSTIDEYVHRIGRTGRCGNTGRAISFFDLE 647

Query: 395 ND-------AKILNDVQDRFEVNISELPDEIDISSYI 424
           +D        K+L D Q     ++    +EI  S+YI
Sbjct: 648 SDNHLAQPLVKVLTDAQQ----DVPAWLEEIAFSTYI 680


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.138    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 14,926,872
Number of Sequences: 37866
Number of extensions: 634818
Number of successful extensions: 1811
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1571
Number of HSP's gapped (non-prelim): 89
length of query: 428
length of database: 18,247,518
effective HSP length: 105
effective length of query: 323
effective length of database: 14,271,588
effective search space: 4609722924
effective search space used: 4609722924
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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