Guide to the Human Genome
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Search of human proteins with 18375619

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|18375619 death inducer-obliterator 1 isoform a [Homo
sapiens]
         (562 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|18375619 death inducer-obliterator 1 isoform a [Homo sapiens]     1155   0.0  
gi|18375617 death inducer-obliterator 1 isoform a [Homo sapiens]     1155   0.0  
gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens]     1082   0.0  
gi|71044477 death inducer-obliterator 1 isoform b [Homo sapiens]     1082   0.0  
gi|90093355 jumonji C domain containing histone demethylase 1 ho...    75   2e-13
gi|7662018 PHD finger protein 3 [Homo sapiens]                         72   2e-12
gi|156142182 CXXC finger 1 (PHD domain) isoform 1 [Homo sapiens]       66   7e-11
gi|156142180 CXXC finger 1 (PHD domain) isoform 2 [Homo sapiens]       66   7e-11
gi|117190342 PHD finger protein 2 [Homo sapiens]                       65   2e-10
gi|32698700 PHD finger protein 8 [Homo sapiens]                        64   4e-10
gi|38788260 bromodomain PHD finger transcription factor isoform ...    63   6e-10
gi|38788274 bromodomain PHD finger transcription factor isoform ...    63   6e-10
gi|91199543 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo s...    52   1e-06
gi|33636768 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo s...    52   1e-06
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom...    49   9e-06
gi|18034775 PHD finger protein 20 [Homo sapiens]                       48   3e-05
gi|38201655 inhibitor of growth family, member 3 isoform 1 [Homo...    46   8e-05
gi|104526627 triadin [Homo sapiens]                                    45   2e-04
gi|239740940 PREDICTED: hypothetical protein XP_002344108 [Homo ...    44   4e-04
gi|110618244 retinoblastoma binding protein 2 isoform 1 [Homo sa...    44   4e-04
gi|110618242 retinoblastoma binding protein 2 isoform 2 [Homo sa...    44   4e-04
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ...    44   4e-04
gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 ...    44   4e-04
gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [...    44   4e-04
gi|27262628 nuclear autoantigenic sperm protein isoform 2 [Homo ...    44   5e-04
gi|27262634 nuclear autoantigenic sperm protein isoform 1 [Homo ...    44   5e-04
gi|116268091 PHD finger protein 23 [Homo sapiens]                      43   7e-04
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]            43   9e-04
gi|169211979 PREDICTED: hypothetical protein [Homo sapiens]            43   9e-04
gi|239735592 TRAF2 and NCK interacting kinase isoform 8 [Homo sa...    43   9e-04

>gi|18375619 death inducer-obliterator 1 isoform a [Homo sapiens]
          Length = 562

 Score = 1155 bits (2989), Expect = 0.0
 Identities = 562/562 (100%), Positives = 562/562 (100%)

Query: 1   MDDKGDPSNEEAPKAIKPTSKEFRKTWGFRRTTIAKREGAGDAEADPLEPPPPQQQLGLS 60
           MDDKGDPSNEEAPKAIKPTSKEFRKTWGFRRTTIAKREGAGDAEADPLEPPPPQQQLGLS
Sbjct: 1   MDDKGDPSNEEAPKAIKPTSKEFRKTWGFRRTTIAKREGAGDAEADPLEPPPPQQQLGLS 60

Query: 61  LRRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATDAETASEGSVESASE 120
           LRRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATDAETASEGSVESASE
Sbjct: 61  LRRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATDAETASEGSVESASE 120

Query: 121 TRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQNRLRRKREQEPTERP 180
           TRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQNRLRRKREQEPTERP
Sbjct: 121 TRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQNRLRRKREQEPTERP 180

Query: 181 LKGIQSRLRKKRREEGPAETVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDRESKLEG 240
           LKGIQSRLRKKRREEGPAETVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDRESKLEG
Sbjct: 181 LKGIQSRLRKKRREEGPAETVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDRESKLEG 240

Query: 241 KAAQDIKDEEPGDLGRPKPECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGIS 300
           KAAQDIKDEEPGDLGRPKPECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGIS
Sbjct: 241 KAAQDIKDEEPGDLGRPKPECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGIS 300

Query: 301 EARGRLLERNGEDYICPNCTILQVQDETHSETADQQEAKWRPGDADGTDCTSIGTIEQKS 360
           EARGRLLERNGEDYICPNCTILQVQDETHSETADQQEAKWRPGDADGTDCTSIGTIEQKS
Sbjct: 301 EARGRLLERNGEDYICPNCTILQVQDETHSETADQQEAKWRPGDADGTDCTSIGTIEQKS 360

Query: 361 SEDQGIKGRIEKAANPSGKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILK 420
           SEDQGIKGRIEKAANPSGKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILK
Sbjct: 361 SEDQGIKGRIEKAANPSGKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILK 420

Query: 421 HAAATMKFLSSGKEQKPKPKEKMKMKPEKPSLPKCGAQAGIKISSVHKRPAPEKKETTVK 480
           HAAATMKFLSSGKEQKPKPKEKMKMKPEKPSLPKCGAQAGIKISSVHKRPAPEKKETTVK
Sbjct: 421 HAAATMKFLSSGKEQKPKPKEKMKMKPEKPSLPKCGAQAGIKISSVHKRPAPEKKETTVK 480

Query: 481 KAVVVPARSEALGKEAACESSTPSWASDHNYNAVKPEKTAAPSPSLLYKCMYHLGVGLLD 540
           KAVVVPARSEALGKEAACESSTPSWASDHNYNAVKPEKTAAPSPSLLYKCMYHLGVGLLD
Sbjct: 481 KAVVVPARSEALGKEAACESSTPSWASDHNYNAVKPEKTAAPSPSLLYKCMYHLGVGLLD 540

Query: 541 PSRSFWIAIPWACPGLGVAALC 562
           PSRSFWIAIPWACPGLGVAALC
Sbjct: 541 PSRSFWIAIPWACPGLGVAALC 562


>gi|18375617 death inducer-obliterator 1 isoform a [Homo sapiens]
          Length = 562

 Score = 1155 bits (2989), Expect = 0.0
 Identities = 562/562 (100%), Positives = 562/562 (100%)

Query: 1   MDDKGDPSNEEAPKAIKPTSKEFRKTWGFRRTTIAKREGAGDAEADPLEPPPPQQQLGLS 60
           MDDKGDPSNEEAPKAIKPTSKEFRKTWGFRRTTIAKREGAGDAEADPLEPPPPQQQLGLS
Sbjct: 1   MDDKGDPSNEEAPKAIKPTSKEFRKTWGFRRTTIAKREGAGDAEADPLEPPPPQQQLGLS 60

Query: 61  LRRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATDAETASEGSVESASE 120
           LRRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATDAETASEGSVESASE
Sbjct: 61  LRRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATDAETASEGSVESASE 120

Query: 121 TRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQNRLRRKREQEPTERP 180
           TRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQNRLRRKREQEPTERP
Sbjct: 121 TRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQNRLRRKREQEPTERP 180

Query: 181 LKGIQSRLRKKRREEGPAETVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDRESKLEG 240
           LKGIQSRLRKKRREEGPAETVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDRESKLEG
Sbjct: 181 LKGIQSRLRKKRREEGPAETVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDRESKLEG 240

Query: 241 KAAQDIKDEEPGDLGRPKPECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGIS 300
           KAAQDIKDEEPGDLGRPKPECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGIS
Sbjct: 241 KAAQDIKDEEPGDLGRPKPECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGIS 300

Query: 301 EARGRLLERNGEDYICPNCTILQVQDETHSETADQQEAKWRPGDADGTDCTSIGTIEQKS 360
           EARGRLLERNGEDYICPNCTILQVQDETHSETADQQEAKWRPGDADGTDCTSIGTIEQKS
Sbjct: 301 EARGRLLERNGEDYICPNCTILQVQDETHSETADQQEAKWRPGDADGTDCTSIGTIEQKS 360

Query: 361 SEDQGIKGRIEKAANPSGKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILK 420
           SEDQGIKGRIEKAANPSGKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILK
Sbjct: 361 SEDQGIKGRIEKAANPSGKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILK 420

Query: 421 HAAATMKFLSSGKEQKPKPKEKMKMKPEKPSLPKCGAQAGIKISSVHKRPAPEKKETTVK 480
           HAAATMKFLSSGKEQKPKPKEKMKMKPEKPSLPKCGAQAGIKISSVHKRPAPEKKETTVK
Sbjct: 421 HAAATMKFLSSGKEQKPKPKEKMKMKPEKPSLPKCGAQAGIKISSVHKRPAPEKKETTVK 480

Query: 481 KAVVVPARSEALGKEAACESSTPSWASDHNYNAVKPEKTAAPSPSLLYKCMYHLGVGLLD 540
           KAVVVPARSEALGKEAACESSTPSWASDHNYNAVKPEKTAAPSPSLLYKCMYHLGVGLLD
Sbjct: 481 KAVVVPARSEALGKEAACESSTPSWASDHNYNAVKPEKTAAPSPSLLYKCMYHLGVGLLD 540

Query: 541 PSRSFWIAIPWACPGLGVAALC 562
           PSRSFWIAIPWACPGLGVAALC
Sbjct: 541 PSRSFWIAIPWACPGLGVAALC 562


>gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens]
          Length = 2240

 Score = 1082 bits (2798), Expect = 0.0
 Identities = 529/529 (100%), Positives = 529/529 (100%)

Query: 1   MDDKGDPSNEEAPKAIKPTSKEFRKTWGFRRTTIAKREGAGDAEADPLEPPPPQQQLGLS 60
           MDDKGDPSNEEAPKAIKPTSKEFRKTWGFRRTTIAKREGAGDAEADPLEPPPPQQQLGLS
Sbjct: 1   MDDKGDPSNEEAPKAIKPTSKEFRKTWGFRRTTIAKREGAGDAEADPLEPPPPQQQLGLS 60

Query: 61  LRRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATDAETASEGSVESASE 120
           LRRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATDAETASEGSVESASE
Sbjct: 61  LRRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATDAETASEGSVESASE 120

Query: 121 TRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQNRLRRKREQEPTERP 180
           TRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQNRLRRKREQEPTERP
Sbjct: 121 TRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQNRLRRKREQEPTERP 180

Query: 181 LKGIQSRLRKKRREEGPAETVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDRESKLEG 240
           LKGIQSRLRKKRREEGPAETVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDRESKLEG
Sbjct: 181 LKGIQSRLRKKRREEGPAETVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDRESKLEG 240

Query: 241 KAAQDIKDEEPGDLGRPKPECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGIS 300
           KAAQDIKDEEPGDLGRPKPECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGIS
Sbjct: 241 KAAQDIKDEEPGDLGRPKPECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGIS 300

Query: 301 EARGRLLERNGEDYICPNCTILQVQDETHSETADQQEAKWRPGDADGTDCTSIGTIEQKS 360
           EARGRLLERNGEDYICPNCTILQVQDETHSETADQQEAKWRPGDADGTDCTSIGTIEQKS
Sbjct: 301 EARGRLLERNGEDYICPNCTILQVQDETHSETADQQEAKWRPGDADGTDCTSIGTIEQKS 360

Query: 361 SEDQGIKGRIEKAANPSGKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILK 420
           SEDQGIKGRIEKAANPSGKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILK
Sbjct: 361 SEDQGIKGRIEKAANPSGKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILK 420

Query: 421 HAAATMKFLSSGKEQKPKPKEKMKMKPEKPSLPKCGAQAGIKISSVHKRPAPEKKETTVK 480
           HAAATMKFLSSGKEQKPKPKEKMKMKPEKPSLPKCGAQAGIKISSVHKRPAPEKKETTVK
Sbjct: 421 HAAATMKFLSSGKEQKPKPKEKMKMKPEKPSLPKCGAQAGIKISSVHKRPAPEKKETTVK 480

Query: 481 KAVVVPARSEALGKEAACESSTPSWASDHNYNAVKPEKTAAPSPSLLYK 529
           KAVVVPARSEALGKEAACESSTPSWASDHNYNAVKPEKTAAPSPSLLYK
Sbjct: 481 KAVVVPARSEALGKEAACESSTPSWASDHNYNAVKPEKTAAPSPSLLYK 529


>gi|71044477 death inducer-obliterator 1 isoform b [Homo sapiens]
          Length = 1189

 Score = 1082 bits (2798), Expect = 0.0
 Identities = 529/529 (100%), Positives = 529/529 (100%)

Query: 1   MDDKGDPSNEEAPKAIKPTSKEFRKTWGFRRTTIAKREGAGDAEADPLEPPPPQQQLGLS 60
           MDDKGDPSNEEAPKAIKPTSKEFRKTWGFRRTTIAKREGAGDAEADPLEPPPPQQQLGLS
Sbjct: 1   MDDKGDPSNEEAPKAIKPTSKEFRKTWGFRRTTIAKREGAGDAEADPLEPPPPQQQLGLS 60

Query: 61  LRRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATDAETASEGSVESASE 120
           LRRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATDAETASEGSVESASE
Sbjct: 61  LRRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATDAETASEGSVESASE 120

Query: 121 TRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQNRLRRKREQEPTERP 180
           TRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQNRLRRKREQEPTERP
Sbjct: 121 TRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQNRLRRKREQEPTERP 180

Query: 181 LKGIQSRLRKKRREEGPAETVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDRESKLEG 240
           LKGIQSRLRKKRREEGPAETVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDRESKLEG
Sbjct: 181 LKGIQSRLRKKRREEGPAETVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDRESKLEG 240

Query: 241 KAAQDIKDEEPGDLGRPKPECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGIS 300
           KAAQDIKDEEPGDLGRPKPECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGIS
Sbjct: 241 KAAQDIKDEEPGDLGRPKPECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGIS 300

Query: 301 EARGRLLERNGEDYICPNCTILQVQDETHSETADQQEAKWRPGDADGTDCTSIGTIEQKS 360
           EARGRLLERNGEDYICPNCTILQVQDETHSETADQQEAKWRPGDADGTDCTSIGTIEQKS
Sbjct: 301 EARGRLLERNGEDYICPNCTILQVQDETHSETADQQEAKWRPGDADGTDCTSIGTIEQKS 360

Query: 361 SEDQGIKGRIEKAANPSGKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILK 420
           SEDQGIKGRIEKAANPSGKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILK
Sbjct: 361 SEDQGIKGRIEKAANPSGKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILK 420

Query: 421 HAAATMKFLSSGKEQKPKPKEKMKMKPEKPSLPKCGAQAGIKISSVHKRPAPEKKETTVK 480
           HAAATMKFLSSGKEQKPKPKEKMKMKPEKPSLPKCGAQAGIKISSVHKRPAPEKKETTVK
Sbjct: 421 HAAATMKFLSSGKEQKPKPKEKMKMKPEKPSLPKCGAQAGIKISSVHKRPAPEKKETTVK 480

Query: 481 KAVVVPARSEALGKEAACESSTPSWASDHNYNAVKPEKTAAPSPSLLYK 529
           KAVVVPARSEALGKEAACESSTPSWASDHNYNAVKPEKTAAPSPSLLYK
Sbjct: 481 KAVVVPARSEALGKEAACESSTPSWASDHNYNAVKPEKTAAPSPSLLYK 529


>gi|90093355 jumonji C domain containing histone demethylase 1
           homolog D [Homo sapiens]
          Length = 941

 Score = 74.7 bits (182), Expect = 2e-13
 Identities = 43/121 (35%), Positives = 58/121 (47%), Gaps = 21/121 (17%)

Query: 240 GKAAQDIKDEEPGDLGRPKPECEGYDPNALYCICRQPHN-NRFMICCDRCEEWFHGDCVG 298
           G AA  +    PG    P P      P  +YC+CRQP++ NRFMI CD C++WFHG CVG
Sbjct: 15  GAAAAAVSVAAPGRASAPPP------PPPVYCVCRQPYDVNRFMIECDICKDWFHGSCVG 68

Query: 299 ISEARGRLLERNGEDYICPNCTILQVQDETHSETADQQEAKWRPGD----ADGTDCTSIG 354
           + E     ++     Y CPNC +L      H  +  ++   W   D     DG+     G
Sbjct: 69  VEEHHAVDIDL----YHCPNCAVL------HGSSLMKKRRNWHRHDYTEIDDGSKPVQAG 118

Query: 355 T 355
           T
Sbjct: 119 T 119


>gi|7662018 PHD finger protein 3 [Homo sapiens]
          Length = 2039

 Score = 71.6 bits (174), Expect = 2e-12
 Identities = 59/234 (25%), Positives = 106/234 (45%), Gaps = 37/234 (15%)

Query: 264 YDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILQ 323
           + P+     C++PH NRFM+ C RC++WFHGDCVG+S ++ + +    ++Y+C  C    
Sbjct: 714 WTPSKQCGFCKKPHGNRFMVGCGRCDDWFHGDCVGLSLSQAQQMGEEDKEYVCVKCC--- 770

Query: 324 VQDETHSETAD------QQEAKWRPGDADGTDCTSIGTIEQKSSEDQGIKGRIEKAANPS 377
            +++  +E  D      Q   ++  GD    +C  +G + + ++ D+       K  + +
Sbjct: 771 AEEDKKTEILDPDTLENQATVEFHSGDKT-MECEKLG-LSKHTTNDR------TKYIDDT 822

Query: 378 GKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILKHAAATMKFLSSGKEQKP 437
            K K+KI +         +  G G       +S  C ++ I K   A ++ +      + 
Sbjct: 823 VKHKVKILK---------RESGEG------RNSSDCRDNEIKKWQLAPLRKMGQPVLPRR 867

Query: 438 KPKEKMKMKPEKPSLPKCGAQAGIKISSVHKRPAPEKKETTVKKAV--VVPARS 489
             +EK +  P++ +   C    G K S        E K+  V+K V  V PA S
Sbjct: 868 SSEEKSEKIPKESTTVTC---TGEKASKPGTHEKQEMKKKKVEKGVLNVHPAAS 918


>gi|156142182 CXXC finger 1 (PHD domain) isoform 1 [Homo sapiens]
          Length = 660

 Score = 66.2 bits (160), Expect = 7e-11
 Identities = 31/75 (41%), Positives = 41/75 (54%), Gaps = 5/75 (6%)

Query: 245 DIKDEEPGDLGRPKPECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARG 304
           D  D EP D G    + E  +   +YCICR+P  N FMI CD C EWFHGDC+ I+E   
Sbjct: 4   DGSDPEPPDAGEDS-KSENGENAPIYCICRKPDINCFMIGCDNCNEWFHGDCIRITEKMA 62

Query: 305 RLLERNGEDYICPNC 319
           + +     ++ C  C
Sbjct: 63  KAI----REWYCREC 73



 Score = 42.7 bits (99), Expect = 9e-04
 Identities = 17/28 (60%), Positives = 21/28 (75%)

Query: 396 KCIGPGCCHVAQPDSVYCSNDCILKHAA 423
           +C+GPGC   AQP S YCS+DC +K AA
Sbjct: 378 QCLGPGCVRPAQPSSKYCSDDCGMKLAA 405


>gi|156142180 CXXC finger 1 (PHD domain) isoform 2 [Homo sapiens]
          Length = 656

 Score = 66.2 bits (160), Expect = 7e-11
 Identities = 31/75 (41%), Positives = 41/75 (54%), Gaps = 5/75 (6%)

Query: 245 DIKDEEPGDLGRPKPECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARG 304
           D  D EP D G    + E  +   +YCICR+P  N FMI CD C EWFHGDC+ I+E   
Sbjct: 4   DGSDPEPPDAGEDS-KSENGENAPIYCICRKPDINCFMIGCDNCNEWFHGDCIRITEKMA 62

Query: 305 RLLERNGEDYICPNC 319
           + +     ++ C  C
Sbjct: 63  KAI----REWYCREC 73



 Score = 42.7 bits (99), Expect = 9e-04
 Identities = 17/28 (60%), Positives = 21/28 (75%)

Query: 396 KCIGPGCCHVAQPDSVYCSNDCILKHAA 423
           +C+GPGC   AQP S YCS+DC +K AA
Sbjct: 374 QCLGPGCVRPAQPSSKYCSDDCGMKLAA 401


>gi|117190342 PHD finger protein 2 [Homo sapiens]
          Length = 1096

 Score = 64.7 bits (156), Expect = 2e-10
 Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 14/81 (17%)

Query: 269 LYCICRQPHN-NRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILQVQDE 327
           +YC+CR P++  RFMI CD C++WFHG CVG+ E     +    + Y CPNC      ++
Sbjct: 6   VYCVCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDI----DIYHCPNC------EK 55

Query: 328 THSETADQQEAKWR---PGDA 345
           TH ++  +++  W    PG A
Sbjct: 56  THGKSTLKKKRTWHKHGPGQA 76


>gi|32698700 PHD finger protein 8 [Homo sapiens]
          Length = 1024

 Score = 63.9 bits (154), Expect = 4e-10
 Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)

Query: 269 LYCICRQPHN-NRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTIL 322
           +YC+CR P++  RFMI CD C++WFHG CVG+ E +   ++     Y CPNC +L
Sbjct: 6   VYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDL----YHCPNCEVL 56


>gi|38788260 bromodomain PHD finger transcription factor isoform 2
            [Homo sapiens]
          Length = 2903

 Score = 63.2 bits (152), Expect = 6e-10
 Identities = 24/52 (46%), Positives = 37/52 (71%), Gaps = 5/52 (9%)

Query: 269  LYCICRQPHN-NRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNC 319
            LYCIC+ P++ ++F I CDRC+ W+HG CVGI ++   L+    ++Y+CP C
Sbjct: 2725 LYCICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAELI----DEYVCPQC 2772


>gi|38788274 bromodomain PHD finger transcription factor isoform 1
            [Homo sapiens]
          Length = 2920

 Score = 63.2 bits (152), Expect = 6e-10
 Identities = 24/52 (46%), Positives = 37/52 (71%), Gaps = 5/52 (9%)

Query: 269  LYCICRQPHN-NRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNC 319
            LYCIC+ P++ ++F I CDRC+ W+HG CVGI ++   L+    ++Y+CP C
Sbjct: 2742 LYCICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAELI----DEYVCPQC 2789


>gi|91199543 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo
           sapiens]
          Length = 1858

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 34/136 (25%), Positives = 52/136 (38%), Gaps = 22/136 (16%)

Query: 214 PSKQEPENDQGVVSQAGKDDRESKLEGKAAQDIKDEEPGDLGRPKPECEGYDPNALYCIC 273
           PS    +N+ G+ +    D+  S      A  I   E G           Y  +   CIC
Sbjct: 80  PSVLISKNEVGIFTTPNFDETSS------ATTISTSEDGS----------YGTDVTRCIC 123

Query: 274 RQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILQVQDETHSETA 333
              H++ +MICCD+C  W H DC+GI        +   + Y+C  C    +  E      
Sbjct: 124 GFTHDDGYMICCDKCSVWQHIDCMGIDR------QHIPDTYLCERCQPRNLDKERAVLLQ 177

Query: 334 DQQEAKWRPGDADGTD 349
            ++      GD   T+
Sbjct: 178 RRKRENMSDGDTSATE 193


>gi|33636768 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo
           sapiens]
          Length = 1858

 Score = 52.0 bits (123), Expect = 1e-06
 Identities = 34/136 (25%), Positives = 52/136 (38%), Gaps = 22/136 (16%)

Query: 214 PSKQEPENDQGVVSQAGKDDRESKLEGKAAQDIKDEEPGDLGRPKPECEGYDPNALYCIC 273
           PS    +N+ G+ +    D+  S      A  I   E G           Y  +   CIC
Sbjct: 80  PSVLISKNEVGIFTTPNFDETSS------ATTISTSEDGS----------YGTDVTRCIC 123

Query: 274 RQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILQVQDETHSETA 333
              H++ +MICCD+C  W H DC+GI        +   + Y+C  C    +  E      
Sbjct: 124 GFTHDDGYMICCDKCSVWQHIDCMGIDR------QHIPDTYLCERCQPRNLDKERAVLLQ 177

Query: 334 DQQEAKWRPGDADGTD 349
            ++      GD   T+
Sbjct: 178 RRKRENMSDGDTSATE 193


>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
           sapiens]
          Length = 1152

 Score = 49.3 bits (116), Expect = 9e-06
 Identities = 50/184 (27%), Positives = 76/184 (41%), Gaps = 21/184 (11%)

Query: 94  EDSGEPTSCPATDAETASEGSVESASETRSGPQSASTAVKERPAS------SEKVKGGDD 147
           ++  E  S   TD    SEG  +S  E   GP+       E  +S       E+ + G+ 
Sbjct: 620 KEKTEILSDDLTDKAEVSEGKAKSVGEAEDGPEGRGDGTCEEGSSGAEHWQDEEREKGEK 679

Query: 148 HDDTSDSDSDGLTLKELQNRLRRKR----EQEPTERPLKGIQSRLRKKRRE-------EG 196
                + +  G   KEL  +   K+    EQE  ER  +G Q    ++  E       EG
Sbjct: 680 DKGRGEMERPGEGEKELAEKEEWKKRDGEEQEQKERE-QGHQKERNQEMEEGGEEEHGEG 738

Query: 197 PAETVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDRESKLEGKAAQDIKDEEPGDLGR 256
             E    E  +  EG    K+E E ++ V  +  K++ E K E +A ++ K EE GD G 
Sbjct: 739 EEEEGDREEEEEKEG--EGKEEGEGEE-VEGEREKEEGERKKEERAGKEEKGEEEGDQGE 795

Query: 257 PKPE 260
            + E
Sbjct: 796 GEEE 799



 Score = 34.3 bits (77), Expect = 0.31
 Identities = 55/276 (19%), Positives = 100/276 (36%), Gaps = 31/276 (11%)

Query: 2   DDKGDPSNEEAPKAIKPTSKEFRKTWGFRRTTIAKREGAGDAEADPLEPPPPQQQLGLSL 61
           + +GD + EE     +    E R+  G +     + E  G+ E +  E    +++ G   
Sbjct: 652 EGRGDGTCEEGSSGAEHWQDEEREK-GEKDKGRGEMERPGEGEKELAEKEEWKKRDGEEQ 710

Query: 62  ----RRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATDAETASEGSVES 117
               R  G Q +R + +E+        G        E+ G+       + E   EG  E 
Sbjct: 711 EQKEREQGHQKERNQEMEE-------GGEEEHGEGEEEEGDREE----EEEKEGEGKEEG 759

Query: 118 ASETRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQNRLRRKREQEPT 177
             E   G +      +++   + K + G++  D  + + +     E + R   K E    
Sbjct: 760 EGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEE-----ETEGRGEEKEEGGEV 814

Query: 178 ERPLKGIQSRLRKKRREEGPAETVGSEASDTV----EGVLPSKQEPENDQGVVSQAGKD- 232
           E          R++  EEG  E    E  +      E     K E E ++G   + G++ 
Sbjct: 815 EGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEG 874

Query: 233 -----DRESKLEGKAAQDIKDEEPGDLGRPKPECEG 263
                + E + EG+   + + EE    G  + E EG
Sbjct: 875 EGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEG 910



 Score = 30.4 bits (67), Expect = 4.5
 Identities = 33/163 (20%), Positives = 60/163 (36%), Gaps = 7/163 (4%)

Query: 94   EDSGEPTSCPATDAETASEGSVESASETRSGPQSASTAVKERPASSEKVKG-GDDHDDTS 152
            E+ GE       + E   EG  E   E     +      +E     E+ +G G   ++  
Sbjct: 868  EEEGEEGEGEGEEEEGEGEGEEEGEGEGEE-EEGEGEGEEEGEGEGEEEEGEGKGEEEGE 926

Query: 153  DSDSDGLTLKELQNRLRRKREQEPTERPLKGIQSRLRKKRREEGPAETV-----GSEASD 207
            + + +G   +        + E E  E   +G +     +  EEG  E       G E   
Sbjct: 927  EGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEEEG 986

Query: 208  TVEGVLPSKQEPENDQGVVSQAGKDDRESKLEGKAAQDIKDEE 250
              EG     +E   ++G   + G+ + E + EG+   +++ EE
Sbjct: 987  EGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEE 1029


>gi|18034775 PHD finger protein 20 [Homo sapiens]
          Length = 1012

 Score = 47.8 bits (112), Expect = 3e-05
 Identities = 49/207 (23%), Positives = 80/207 (38%), Gaps = 18/207 (8%)

Query: 124 GPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQNRLRRKREQEPTERPLKG 183
           GP SAS    +   + ++V          + + +    + ++ + ++K++++   +P   
Sbjct: 498 GP-SASDKPSQETLTRKRVSASSPTTKDKEKNKEKKFKEFVRVKPKKKKKKKKKTKPECP 556

Query: 184 IQSRLRKKRREEGP--AETVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDRESKLEGK 241
               +    +E  P  A  V    S    GV  S Q    + G      K   E  L   
Sbjct: 557 CSEEISDTSQEPSPPKAFAVTRCGSSHKPGVHMSPQLHGPESGHHKGKVKALEEDNLSES 616

Query: 242 AAQDI--KDEEPGD----LGRPKPECEG---YDPNALYCICRQPHNNRFMICCDRCEEWF 292
           +++     D+E G        P  E +G   YD   + CIC     N FMI C+ C+ W 
Sbjct: 617 SSESFLWSDDEYGQDVDVTTNPDEELDGDDRYDFEVVRCICEVQEENDFMIQCEECQCWQ 676

Query: 293 HGDCVGISEARGRLLERNGEDYICPNC 319
           HG C+G+ E      E   E Y C  C
Sbjct: 677 HGVCMGLLE------ENVPEKYTCYVC 697


>gi|38201655 inhibitor of growth family, member 3 isoform 1 [Homo
           sapiens]
          Length = 418

 Score = 46.2 bits (108), Expect = 8e-05
 Identities = 36/133 (27%), Positives = 54/133 (40%), Gaps = 21/133 (15%)

Query: 200 TVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDRESKLEGKAAQDIKDEEPGDLGRPKP 259
           T+   AS +       ++   N++    Q+      S L   ++     +E        P
Sbjct: 284 TLTQNASSSAADSRSGRKSKNNNKSSSQQSSSSSSSSSLSSCSSSSTVVQEISQQTTVVP 343

Query: 260 ECEG-------YDPNA-LYCICRQPHNNRFMICCDRCE---EWFHGDCVGISEA-RGRLL 307
           E +        YDPN   YCIC Q      M+ CD  +   EWFH  CVG++EA +G+  
Sbjct: 344 ESDSNSQVDWTYDPNEPRYCICNQVSYGE-MVGCDNQDCPIEWFHYGCVGLTEAPKGK-- 400

Query: 308 ERNGEDYICPNCT 320
                 + CP CT
Sbjct: 401 ------WYCPQCT 407


>gi|104526627 triadin [Homo sapiens]
          Length = 729

 Score = 44.7 bits (104), Expect = 2e-04
 Identities = 82/387 (21%), Positives = 147/387 (37%), Gaps = 57/387 (14%)

Query: 139 SEKVKGGDDHDDTSDSDSDGLTLKE--LQNRLRRKREQEPTERPLKGIQSRLRKKRREEG 196
           S+ +   D+ DD  D D+D   + E  L+ +   K + E  E+P + IQ+++  K +E+G
Sbjct: 111 SDIISSEDEEDDDGDEDTDKGEIDEPPLRKKEIHKDKTEKQEKPERKIQTKVTHKEKEKG 170

Query: 197 P---AETVGSEASDTVEGVLPSKQEPE-----NDQGVVSQAGKDDRESKLEGKAAQDIKD 248
                E    E   T +  +  K++PE      +Q     A K + ++K E K  +  K 
Sbjct: 171 KEKVREKEKPEKKATHKEKIEKKEKPETKTLAKEQKKAKTAEKSEEKTKKEVKGGKQEKV 230

Query: 249 EEPG----DLGRPKPECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARG 304
           ++      ++ +   + +  +      + +    +++  C    + + HGD         
Sbjct: 231 KQTAAKVKEVQKTPSKPKEKEDKEKAAVSKHEQKDQYAFCRYMIDIFVHGD--------- 281

Query: 305 RLLERNGEDYICPNCTILQVQDETHSETA-DQQEAKWRPGDADGTDCTSIGTIEQKSSED 363
             L+      I P     Q    T +  A +++E + +  +   T        E K  E 
Sbjct: 282 --LKPGQSPAIPPPLPTEQASRPTPASPALEEKEGEKKKAEKKVTS-------ETKKKEK 332

Query: 364 QGIKGRIEKAANPSGKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILKHAA 423
           + IK + EK      +KK          PG +     G   +A         D   + + 
Sbjct: 333 EDIKKKSEKETAIDVEKK---------EPGKASETKQGTVKIAA--QAAAKKDEKKEDSK 381

Query: 424 ATMKFLS----SGKEQKPKPK--EKMKMKPEKPSLPK------CGAQAGIKISSVH-KRP 470
            T K        GK+Q+ K K  E  K   ++ S+P          +A  +I +V  K+ 
Sbjct: 382 KTKKPAEVEQPKGKKQEKKEKHVEPAKSPKKEHSVPSDKQVKAKTERAKEEIGAVSIKKA 441

Query: 471 APEKKETTVKKAVVVPARSEALGKEAA 497
            P KKE    K V    R E  GK ++
Sbjct: 442 VPGKKEEKTTKTVEQEIRKEKSGKTSS 468



 Score = 38.1 bits (87), Expect = 0.022
 Identities = 104/521 (19%), Positives = 186/521 (35%), Gaps = 101/521 (19%)

Query: 41  GDAEADPLE-PPPPQQQLGLSLRRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEP 99
           GD + D  E   PP ++  +   ++ +Q K   +++  +T   +   +     + +  +P
Sbjct: 124 GDEDTDKGEIDEPPLRKKEIHKDKTEKQEKPERKIQTKVTHKEKEKGKE---KVREKEKP 180

Query: 100 TSCPATDAETASEGSVESASETRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGL 159
               AT  E   +             + A TA K    + ++VKGG        +     
Sbjct: 181 EK-KATHKEKIEKKEKPETKTLAKEQKKAKTAEKSEEKTKKEVKGGKQEKVKQTAAK--- 236

Query: 160 TLKELQNRLRRKREQEPTERPLKGIQSRLRKKRR-------------------------- 193
            +KE+Q    + +E+E  E   K   S+  +K +                          
Sbjct: 237 -VKEVQKTPSKPKEKEDKE---KAAVSKHEQKDQYAFCRYMIDIFVHGDLKPGQSPAIPP 292

Query: 194 ----EEGPAETVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDRESKLEGKAAQDIKDE 249
               E+    T  S A +  EG    K+  +       +  K+D + K E + A D++ +
Sbjct: 293 PLPTEQASRPTPASPALEEKEG--EKKKAEKKVTSETKKKEKEDIKKKSEKETAIDVEKK 350

Query: 250 EPGDLGRPKPECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLER 309
           EPG     K   +G    A     ++           +  E        + + +G+  E+
Sbjct: 351 EPGKASETK---QGTVKIAAQAAAKKDEKKEDSKKTKKPAE--------VEQPKGKKQEK 399

Query: 310 NGEDYICPNCTILQVQDETHSETADQQEAKWRPGDADGTDCTSI-----GTIEQKSSEDQ 364
             E ++ P     +   + HS  +D+Q         +     SI     G  E+K+++  
Sbjct: 400 K-EKHVEP----AKSPKKEHSVPSDKQVKAKTERAKEEIGAVSIKKAVPGKKEEKTTKTV 454

Query: 365 GIKGRIEKAANPSGKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILKHAAA 424
             + R EK+   S   K K  +P+    G  + + P      +P++              
Sbjct: 455 EQEIRKEKSGKTSSILKDK--EPI---KGKEEKV-PASLKEKEPET------------KK 496

Query: 425 TMKFLSSGKEQKPKPKEKMKMKPEKPSLPKCGAQAGIKISSVHKRPAPEKKETTVKKAVV 484
             K   +GKE KPKP +    K EKP  P+   +A         +PA  +K    K+ +V
Sbjct: 497 DEKMSKAGKEVKPKPPQLQGKKEEKPE-PQIKKEA---------KPAISEKVQIHKQDIV 546

Query: 485 VPARSEALGKEAACESSTPSWASDHNYNAVKPEKTAAPSPS 525
            P ++ + GK        P         AV  EKTA P P+
Sbjct: 547 KPEKTVSHGK--------PEEKVLKQVKAVTIEKTAKPKPT 579


>gi|239740940 PREDICTED: hypothetical protein XP_002344108 [Homo
           sapiens]
          Length = 168

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 4/53 (7%)

Query: 267 NALYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNC 319
           N  Y +    + +RF I CD C  W++G+CVGI+E   + +    + YIC +C
Sbjct: 16  NDNYIVIFVVNTSRFYIGCDLCTNWYYGECVGIAEKEAKKM----DVYICNDC 64


>gi|110618244 retinoblastoma binding protein 2 isoform 1 [Homo
            sapiens]
          Length = 1690

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 5/54 (9%)

Query: 270  YCICRQPHNNRFMICCDRCEEWFHGDCVGI----SEARGRLLERNGEDYICPNC 319
            +CICR+  +  FM+ C+ C++WFH  CV +    S+ +G   +     ++CP C
Sbjct: 1163 FCICRKTASG-FMLQCELCKDWFHNSCVPLPKSSSQKKGSSWQAKEVKFLCPLC 1215



 Score = 41.2 bits (95), Expect = 0.003
 Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 9/62 (14%)

Query: 262  EGYDPNALYCI--CRQPHNNR--FMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICP 317
            E  D NA+     C++P  ++  ++ C   C+EWFH  CVG+S           EDYIC 
Sbjct: 1602 ESDDENAVCAAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMA-----ENEDYICI 1656

Query: 318  NC 319
            NC
Sbjct: 1657 NC 1658


>gi|110618242 retinoblastoma binding protein 2 isoform 2 [Homo
            sapiens]
          Length = 1641

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 5/54 (9%)

Query: 270  YCICRQPHNNRFMICCDRCEEWFHGDCVGI----SEARGRLLERNGEDYICPNC 319
            +CICR+  +  FM+ C+ C++WFH  CV +    S+ +G   +     ++CP C
Sbjct: 1163 FCICRKTASG-FMLQCELCKDWFHNSCVPLPKSSSQKKGSSWQAKEVKFLCPLC 1215


>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 [Homo
            sapiens]
          Length = 1125

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 40/183 (21%), Positives = 68/183 (37%), Gaps = 6/183 (3%)

Query: 47   PLEPPPPQQQLGLSLRRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATD 106
            P + PPP QQ     R   RQ   + R ++      R GRRS    +E+  E       D
Sbjct: 947  PSQQPPPTQQQPQQFRNDNRQQFNSGRDQE------RFGRRSFGNRVENDRERYGNRNDD 1000

Query: 107  AETASEGSVESASETRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQN 166
             + ++    E    +    +      + R +S  + +  D  D  S  + +    KE   
Sbjct: 1001 RDNSNRDRREWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEEARGKEKPE 1060

Query: 167  RLRRKREQEPTERPLKGIQSRLRKKRREEGPAETVGSEASDTVEGVLPSKQEPENDQGVV 226
               R    +  E P+  + +       E+G +E    + S+ +     S  EPE D G  
Sbjct: 1061 VTDRAGGNKTVEPPISQVGNVDTASELEKGVSEAAVLKPSEELPAEATSSVEPEKDSGSA 1120

Query: 227  SQA 229
            ++A
Sbjct: 1121 AEA 1123


>gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 [Homo
            sapiens]
          Length = 1132

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 40/183 (21%), Positives = 68/183 (37%), Gaps = 6/183 (3%)

Query: 47   PLEPPPPQQQLGLSLRRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATD 106
            P + PPP QQ     R   RQ   + R ++      R GRRS    +E+  E       D
Sbjct: 954  PSQQPPPTQQQPQQFRNDNRQQFNSGRDQE------RFGRRSFGNRVENDRERYGNRNDD 1007

Query: 107  AETASEGSVESASETRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQN 166
             + ++    E    +    +      + R +S  + +  D  D  S  + +    KE   
Sbjct: 1008 RDNSNRDRREWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEEARGKEKPE 1067

Query: 167  RLRRKREQEPTERPLKGIQSRLRKKRREEGPAETVGSEASDTVEGVLPSKQEPENDQGVV 226
               R    +  E P+  + +       E+G +E    + S+ +     S  EPE D G  
Sbjct: 1068 VTDRAGGNKTVEPPISQVGNVDTASELEKGVSEAAVLKPSEELPAEATSSVEPEKDSGSA 1127

Query: 227  SQA 229
            ++A
Sbjct: 1128 AEA 1130


>gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [Homo
            sapiens]
          Length = 1147

 Score = 43.9 bits (102), Expect = 4e-04
 Identities = 40/183 (21%), Positives = 68/183 (37%), Gaps = 6/183 (3%)

Query: 47   PLEPPPPQQQLGLSLRRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATD 106
            P + PPP QQ     R   RQ   + R ++      R GRRS    +E+  E       D
Sbjct: 969  PSQQPPPTQQQPQQFRNDNRQQFNSGRDQE------RFGRRSFGNRVENDRERYGNRNDD 1022

Query: 107  AETASEGSVESASETRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQN 166
             + ++    E    +    +      + R +S  + +  D  D  S  + +    KE   
Sbjct: 1023 RDNSNRDRREWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEEARGKEKPE 1082

Query: 167  RLRRKREQEPTERPLKGIQSRLRKKRREEGPAETVGSEASDTVEGVLPSKQEPENDQGVV 226
               R    +  E P+  + +       E+G +E    + S+ +     S  EPE D G  
Sbjct: 1083 VTDRAGGNKTVEPPISQVGNVDTASELEKGVSEAAVLKPSEELPAEATSSVEPEKDSGSA 1142

Query: 227  SQA 229
            ++A
Sbjct: 1143 AEA 1145


>gi|27262628 nuclear autoantigenic sperm protein isoform 2 [Homo
           sapiens]
          Length = 788

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 53/242 (21%), Positives = 96/242 (39%), Gaps = 31/242 (12%)

Query: 33  TIAKREGAGDAEADPLEPPPPQQQLGLSLRRSGRQPKRTERVEQFLTIARRRGRRSMPVS 92
           T+ K+  A + EA+ L+P      +G      G +P+     E+ +T     G+  +   
Sbjct: 285 TLEKQGTAVEVEAESLDPTVKPVDVG------GDEPE-----EKVVTSENEAGKAVLEQL 333

Query: 93  LEDSGEPTS-CPATDAETASEGSVESASETRSGP-QSASTAVKERPASSEKVKGGDDHDD 150
           +     P    P    E A   +VE+ SE    P Q A    K+   +   V G     +
Sbjct: 334 VGQEVPPAEESPEVTTEAAEASAVEAGSEVSEKPGQEAPVLPKDGAVNGPSVVGDQTPIE 393

Query: 151 --------TSDSDSDGLT----LKELQNRLRRKREQEPTERPLKGIQSRLRKKRREEGPA 198
                   T   D  GL      K + ++   K   E +E    G+ +++ +   E+ P 
Sbjct: 394 PQTSIERLTETKDGSGLEEKVRAKLVPSQEETKLSVEESEAAGDGVDTKVAQGATEKSPE 453

Query: 199 ETVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDR------ESKLEGKAAQDIKDEEPG 252
           + V   A++  +      +E E  +G      ++D+      +S LE K+ Q+ ++EE G
Sbjct: 454 DKVQIAANEETQEREEQMKEGEETEGSEEDDKENDKTEEMPNDSVLENKSLQENEEEEIG 513

Query: 253 DL 254
           +L
Sbjct: 514 NL 515


>gi|27262634 nuclear autoantigenic sperm protein isoform 1 [Homo
           sapiens]
          Length = 790

 Score = 43.5 bits (101), Expect = 5e-04
 Identities = 53/242 (21%), Positives = 96/242 (39%), Gaps = 31/242 (12%)

Query: 33  TIAKREGAGDAEADPLEPPPPQQQLGLSLRRSGRQPKRTERVEQFLTIARRRGRRSMPVS 92
           T+ K+  A + EA+ L+P      +G      G +P+     E+ +T     G+  +   
Sbjct: 287 TLEKQGTAVEVEAESLDPTVKPVDVG------GDEPE-----EKVVTSENEAGKAVLEQL 335

Query: 93  LEDSGEPTS-CPATDAETASEGSVESASETRSGP-QSASTAVKERPASSEKVKGGDDHDD 150
           +     P    P    E A   +VE+ SE    P Q A    K+   +   V G     +
Sbjct: 336 VGQEVPPAEESPEVTTEAAEASAVEAGSEVSEKPGQEAPVLPKDGAVNGPSVVGDQTPIE 395

Query: 151 --------TSDSDSDGLT----LKELQNRLRRKREQEPTERPLKGIQSRLRKKRREEGPA 198
                   T   D  GL      K + ++   K   E +E    G+ +++ +   E+ P 
Sbjct: 396 PQTSIERLTETKDGSGLEEKVRAKLVPSQEETKLSVEESEAAGDGVDTKVAQGATEKSPE 455

Query: 199 ETVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDR------ESKLEGKAAQDIKDEEPG 252
           + V   A++  +      +E E  +G      ++D+      +S LE K+ Q+ ++EE G
Sbjct: 456 DKVQIAANEETQEREEQMKEGEETEGSEEDDKENDKTEEMPNDSVLENKSLQENEEEEIG 515

Query: 253 DL 254
           +L
Sbjct: 516 NL 517


>gi|116268091 PHD finger protein 23 [Homo sapiens]
          Length = 403

 Score = 43.1 bits (100), Expect = 7e-04
 Identities = 65/289 (22%), Positives = 98/289 (33%), Gaps = 32/289 (11%)

Query: 35  AKREGAGDAEADPLEPPPPQQQLG-LSLRRSGRQPKRTERVEQFLTIARRRGRRSM-PVS 92
           AK      A+A P +P PP+     L    S    ++ +  +    +   +    + P S
Sbjct: 94  AKSSKRRAAQAGPTQPGPPRSTFSRLQAPDSATLLEKMKLKDSLFDLDGPKVASPLSPTS 153

Query: 93  LEDSGEP----TSCPATDAETASEGSVESASETRSGPQS-ASTAVKERPASSEKVKGGDD 147
           L  +  P    T  P +  + +     +     + GP + A   V  RP  +     GD 
Sbjct: 154 LTHTSRPPAALTPVPLSQGDLSHPPRKKDRKNRKLGPGAGAGFGVLRRPRPTP----GDG 209

Query: 148 HDDTSDSDSDGLTLKELQNRLRRKREQEPTERPLKGIQSRLRKKRREEGPAE----TVGS 203
              +    S    LK+ + R  R     P + P     S   ++  EE   E     VG 
Sbjct: 210 EKRSRIKKSKKRKLKKAE-RGDRLPPPGPPQAPPSDTDSEEEEEEEEEEEEEEMATVVGG 268

Query: 204 EASDTVEGVLPSKQEPENDQGVVSQAGKDDRESKLEGKAAQDIKDEEPGDLGRPKPECEG 263
           EA   V   LP+  E       V   G    +S  E K     +  + GD    + E   
Sbjct: 269 EAPVPV---LPTPPEAPRPPATVHPEGVPPADS--ESKEVGSTETSQDGDASSSEGEMRV 323

Query: 264 YDPNALY-----------CICRQPHNNRFMICCDRCEEWFHGDCVGISE 301
            D + +            C CR+P   R MI C  C  W H  C  I +
Sbjct: 324 MDEDIMVESGDDSWDLITCYCRKPFAGRPMIECSLCGTWIHLSCAKIKK 372


>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 245

 Score = 42.7 bits (99), Expect = 9e-04
 Identities = 36/157 (22%), Positives = 67/157 (42%), Gaps = 18/157 (11%)

Query: 106 DAETASEGSVESASETRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQ 165
           + ET  EG  E  SE +   +      +ER    ++ +G          +  G   KE +
Sbjct: 44  EIETRKEGKKERESERKKERREREKRKREREKERKRERG--------KKEKKGERKKEER 95

Query: 166 NRLRRKREQEPTERPLKGIQSRLRKKRREEGPAETVGSEASDTVEGVLPSKQEPENDQGV 225
            R +R+RE+E  E   K  + R +K+++E G     G E           K+E + ++  
Sbjct: 96  ERKKRRREKENKEGEEK--EKRKKKEKKERGRTSKEGKERE--------RKEERKREERK 145

Query: 226 VSQAGKDDRESKLEGKAAQDIKDEEPGDLGRPKPECE 262
             +  K++RE + E K  +  + ++ G+    + E E
Sbjct: 146 ERERKKEEREKERERKERKKRERKQVGEKEEERKEKE 182



 Score = 31.6 bits (70), Expect = 2.0
 Identities = 29/133 (21%), Positives = 48/133 (36%), Gaps = 4/133 (3%)

Query: 62  RRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATDAETASEGSVESASET 121
           R  G++ K+ ER ++     +RR  +      E              T+ EG      E 
Sbjct: 79  RERGKKEKKGERKKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEE 138

Query: 122 RSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQNRLRRKREQEPTERPL 181
           R   +      K+     E+ +      +           KE + + R+KRE+   ER  
Sbjct: 139 RKREERKERERKKEEREKERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERK- 197

Query: 182 KGIQSRLRKKRRE 194
              + R RK+RRE
Sbjct: 198 ---KERERKERRE 207


>gi|169211979 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 168

 Score = 42.7 bits (99), Expect = 9e-04
 Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 6/52 (11%)

Query: 280 RFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILQVQDETHSE 331
           RF I CD C  W++G+CVGI+E   + +    + YIC +C   Q Q+ +  E
Sbjct: 29  RFYIGCDLCTNWYYGECVGIAEKEAKKM----DVYICNDCK--QAQEGSSEE 74


>gi|239735592 TRAF2 and NCK interacting kinase isoform 8 [Homo
           sapiens]
          Length = 1268

 Score = 42.7 bits (99), Expect = 9e-04
 Identities = 49/185 (26%), Positives = 73/185 (39%), Gaps = 14/185 (7%)

Query: 63  RSGRQPKRTERVEQFLT--IARRRGRRSMPVSLEDSGEPTSCPATDAETASEGSVESASE 120
           R G QP R    +   T  I     +R+   S   S  P+S P++   +       S+  
Sbjct: 614 RLGSQPIRASNPDLRRTEPILESPLQRTSSGSSSSSSTPSSQPSSQGGSQPGSQAGSSER 673

Query: 121 TRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQNRLRRKREQEPTERP 180
           TR    S S      P    KVK  +  D T  S    LT   L   LR  R +E T RP
Sbjct: 674 TRVRANSKSEGSPVLPHEPAKVKPEESRDITRPSRPADLTA--LAKELRELRIEE-TNRP 730

Query: 181 LKGI--------QSRLRKKRREEGPAET-VGSEASDTVEGVLPSKQEPENDQGVVSQAGK 231
           +K +        +S   ++  E+G +ET  G+ A   +  ++P+     N+Q  V   G 
Sbjct: 731 MKKVTDYSSSSEESESSEEEEEDGESETHDGTVAVSDIPRLIPTGAPGSNEQYNVGMVGT 790

Query: 232 DDRES 236
              E+
Sbjct: 791 HGLET 795


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.310    0.129    0.385 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,156,731
Number of Sequences: 37866
Number of extensions: 1410513
Number of successful extensions: 6677
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 410
Number of HSP's that attempted gapping in prelim test: 5872
Number of HSP's gapped (non-prelim): 1124
length of query: 562
length of database: 18,247,518
effective HSP length: 107
effective length of query: 455
effective length of database: 14,195,856
effective search space: 6459114480
effective search space used: 6459114480
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 65 (29.6 bits)

Search results were obtained with NCBI BLAST and RefSeq entries.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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