Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 18375619
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|18375619 death inducer-obliterator 1 isoform a [Homo
sapiens]
(562 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|18375619 death inducer-obliterator 1 isoform a [Homo sapiens] 1155 0.0
gi|18375617 death inducer-obliterator 1 isoform a [Homo sapiens] 1155 0.0
gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens] 1082 0.0
gi|71044477 death inducer-obliterator 1 isoform b [Homo sapiens] 1082 0.0
gi|90093355 jumonji C domain containing histone demethylase 1 ho... 75 2e-13
gi|7662018 PHD finger protein 3 [Homo sapiens] 72 2e-12
gi|156142182 CXXC finger 1 (PHD domain) isoform 1 [Homo sapiens] 66 7e-11
gi|156142180 CXXC finger 1 (PHD domain) isoform 2 [Homo sapiens] 66 7e-11
gi|117190342 PHD finger protein 2 [Homo sapiens] 65 2e-10
gi|32698700 PHD finger protein 8 [Homo sapiens] 64 4e-10
gi|38788260 bromodomain PHD finger transcription factor isoform ... 63 6e-10
gi|38788274 bromodomain PHD finger transcription factor isoform ... 63 6e-10
gi|91199543 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo s... 52 1e-06
gi|33636768 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo s... 52 1e-06
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 49 9e-06
gi|18034775 PHD finger protein 20 [Homo sapiens] 48 3e-05
gi|38201655 inhibitor of growth family, member 3 isoform 1 [Homo... 46 8e-05
gi|104526627 triadin [Homo sapiens] 45 2e-04
gi|239740940 PREDICTED: hypothetical protein XP_002344108 [Homo ... 44 4e-04
gi|110618244 retinoblastoma binding protein 2 isoform 1 [Homo sa... 44 4e-04
gi|110618242 retinoblastoma binding protein 2 isoform 2 [Homo sa... 44 4e-04
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ... 44 4e-04
gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 ... 44 4e-04
gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [... 44 4e-04
gi|27262628 nuclear autoantigenic sperm protein isoform 2 [Homo ... 44 5e-04
gi|27262634 nuclear autoantigenic sperm protein isoform 1 [Homo ... 44 5e-04
gi|116268091 PHD finger protein 23 [Homo sapiens] 43 7e-04
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 43 9e-04
gi|169211979 PREDICTED: hypothetical protein [Homo sapiens] 43 9e-04
gi|239735592 TRAF2 and NCK interacting kinase isoform 8 [Homo sa... 43 9e-04
>gi|18375619 death inducer-obliterator 1 isoform a [Homo sapiens]
Length = 562
Score = 1155 bits (2989), Expect = 0.0
Identities = 562/562 (100%), Positives = 562/562 (100%)
Query: 1 MDDKGDPSNEEAPKAIKPTSKEFRKTWGFRRTTIAKREGAGDAEADPLEPPPPQQQLGLS 60
MDDKGDPSNEEAPKAIKPTSKEFRKTWGFRRTTIAKREGAGDAEADPLEPPPPQQQLGLS
Sbjct: 1 MDDKGDPSNEEAPKAIKPTSKEFRKTWGFRRTTIAKREGAGDAEADPLEPPPPQQQLGLS 60
Query: 61 LRRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATDAETASEGSVESASE 120
LRRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATDAETASEGSVESASE
Sbjct: 61 LRRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATDAETASEGSVESASE 120
Query: 121 TRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQNRLRRKREQEPTERP 180
TRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQNRLRRKREQEPTERP
Sbjct: 121 TRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQNRLRRKREQEPTERP 180
Query: 181 LKGIQSRLRKKRREEGPAETVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDRESKLEG 240
LKGIQSRLRKKRREEGPAETVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDRESKLEG
Sbjct: 181 LKGIQSRLRKKRREEGPAETVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDRESKLEG 240
Query: 241 KAAQDIKDEEPGDLGRPKPECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGIS 300
KAAQDIKDEEPGDLGRPKPECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGIS
Sbjct: 241 KAAQDIKDEEPGDLGRPKPECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGIS 300
Query: 301 EARGRLLERNGEDYICPNCTILQVQDETHSETADQQEAKWRPGDADGTDCTSIGTIEQKS 360
EARGRLLERNGEDYICPNCTILQVQDETHSETADQQEAKWRPGDADGTDCTSIGTIEQKS
Sbjct: 301 EARGRLLERNGEDYICPNCTILQVQDETHSETADQQEAKWRPGDADGTDCTSIGTIEQKS 360
Query: 361 SEDQGIKGRIEKAANPSGKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILK 420
SEDQGIKGRIEKAANPSGKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILK
Sbjct: 361 SEDQGIKGRIEKAANPSGKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILK 420
Query: 421 HAAATMKFLSSGKEQKPKPKEKMKMKPEKPSLPKCGAQAGIKISSVHKRPAPEKKETTVK 480
HAAATMKFLSSGKEQKPKPKEKMKMKPEKPSLPKCGAQAGIKISSVHKRPAPEKKETTVK
Sbjct: 421 HAAATMKFLSSGKEQKPKPKEKMKMKPEKPSLPKCGAQAGIKISSVHKRPAPEKKETTVK 480
Query: 481 KAVVVPARSEALGKEAACESSTPSWASDHNYNAVKPEKTAAPSPSLLYKCMYHLGVGLLD 540
KAVVVPARSEALGKEAACESSTPSWASDHNYNAVKPEKTAAPSPSLLYKCMYHLGVGLLD
Sbjct: 481 KAVVVPARSEALGKEAACESSTPSWASDHNYNAVKPEKTAAPSPSLLYKCMYHLGVGLLD 540
Query: 541 PSRSFWIAIPWACPGLGVAALC 562
PSRSFWIAIPWACPGLGVAALC
Sbjct: 541 PSRSFWIAIPWACPGLGVAALC 562
>gi|18375617 death inducer-obliterator 1 isoform a [Homo sapiens]
Length = 562
Score = 1155 bits (2989), Expect = 0.0
Identities = 562/562 (100%), Positives = 562/562 (100%)
Query: 1 MDDKGDPSNEEAPKAIKPTSKEFRKTWGFRRTTIAKREGAGDAEADPLEPPPPQQQLGLS 60
MDDKGDPSNEEAPKAIKPTSKEFRKTWGFRRTTIAKREGAGDAEADPLEPPPPQQQLGLS
Sbjct: 1 MDDKGDPSNEEAPKAIKPTSKEFRKTWGFRRTTIAKREGAGDAEADPLEPPPPQQQLGLS 60
Query: 61 LRRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATDAETASEGSVESASE 120
LRRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATDAETASEGSVESASE
Sbjct: 61 LRRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATDAETASEGSVESASE 120
Query: 121 TRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQNRLRRKREQEPTERP 180
TRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQNRLRRKREQEPTERP
Sbjct: 121 TRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQNRLRRKREQEPTERP 180
Query: 181 LKGIQSRLRKKRREEGPAETVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDRESKLEG 240
LKGIQSRLRKKRREEGPAETVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDRESKLEG
Sbjct: 181 LKGIQSRLRKKRREEGPAETVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDRESKLEG 240
Query: 241 KAAQDIKDEEPGDLGRPKPECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGIS 300
KAAQDIKDEEPGDLGRPKPECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGIS
Sbjct: 241 KAAQDIKDEEPGDLGRPKPECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGIS 300
Query: 301 EARGRLLERNGEDYICPNCTILQVQDETHSETADQQEAKWRPGDADGTDCTSIGTIEQKS 360
EARGRLLERNGEDYICPNCTILQVQDETHSETADQQEAKWRPGDADGTDCTSIGTIEQKS
Sbjct: 301 EARGRLLERNGEDYICPNCTILQVQDETHSETADQQEAKWRPGDADGTDCTSIGTIEQKS 360
Query: 361 SEDQGIKGRIEKAANPSGKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILK 420
SEDQGIKGRIEKAANPSGKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILK
Sbjct: 361 SEDQGIKGRIEKAANPSGKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILK 420
Query: 421 HAAATMKFLSSGKEQKPKPKEKMKMKPEKPSLPKCGAQAGIKISSVHKRPAPEKKETTVK 480
HAAATMKFLSSGKEQKPKPKEKMKMKPEKPSLPKCGAQAGIKISSVHKRPAPEKKETTVK
Sbjct: 421 HAAATMKFLSSGKEQKPKPKEKMKMKPEKPSLPKCGAQAGIKISSVHKRPAPEKKETTVK 480
Query: 481 KAVVVPARSEALGKEAACESSTPSWASDHNYNAVKPEKTAAPSPSLLYKCMYHLGVGLLD 540
KAVVVPARSEALGKEAACESSTPSWASDHNYNAVKPEKTAAPSPSLLYKCMYHLGVGLLD
Sbjct: 481 KAVVVPARSEALGKEAACESSTPSWASDHNYNAVKPEKTAAPSPSLLYKCMYHLGVGLLD 540
Query: 541 PSRSFWIAIPWACPGLGVAALC 562
PSRSFWIAIPWACPGLGVAALC
Sbjct: 541 PSRSFWIAIPWACPGLGVAALC 562
>gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens]
Length = 2240
Score = 1082 bits (2798), Expect = 0.0
Identities = 529/529 (100%), Positives = 529/529 (100%)
Query: 1 MDDKGDPSNEEAPKAIKPTSKEFRKTWGFRRTTIAKREGAGDAEADPLEPPPPQQQLGLS 60
MDDKGDPSNEEAPKAIKPTSKEFRKTWGFRRTTIAKREGAGDAEADPLEPPPPQQQLGLS
Sbjct: 1 MDDKGDPSNEEAPKAIKPTSKEFRKTWGFRRTTIAKREGAGDAEADPLEPPPPQQQLGLS 60
Query: 61 LRRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATDAETASEGSVESASE 120
LRRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATDAETASEGSVESASE
Sbjct: 61 LRRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATDAETASEGSVESASE 120
Query: 121 TRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQNRLRRKREQEPTERP 180
TRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQNRLRRKREQEPTERP
Sbjct: 121 TRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQNRLRRKREQEPTERP 180
Query: 181 LKGIQSRLRKKRREEGPAETVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDRESKLEG 240
LKGIQSRLRKKRREEGPAETVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDRESKLEG
Sbjct: 181 LKGIQSRLRKKRREEGPAETVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDRESKLEG 240
Query: 241 KAAQDIKDEEPGDLGRPKPECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGIS 300
KAAQDIKDEEPGDLGRPKPECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGIS
Sbjct: 241 KAAQDIKDEEPGDLGRPKPECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGIS 300
Query: 301 EARGRLLERNGEDYICPNCTILQVQDETHSETADQQEAKWRPGDADGTDCTSIGTIEQKS 360
EARGRLLERNGEDYICPNCTILQVQDETHSETADQQEAKWRPGDADGTDCTSIGTIEQKS
Sbjct: 301 EARGRLLERNGEDYICPNCTILQVQDETHSETADQQEAKWRPGDADGTDCTSIGTIEQKS 360
Query: 361 SEDQGIKGRIEKAANPSGKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILK 420
SEDQGIKGRIEKAANPSGKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILK
Sbjct: 361 SEDQGIKGRIEKAANPSGKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILK 420
Query: 421 HAAATMKFLSSGKEQKPKPKEKMKMKPEKPSLPKCGAQAGIKISSVHKRPAPEKKETTVK 480
HAAATMKFLSSGKEQKPKPKEKMKMKPEKPSLPKCGAQAGIKISSVHKRPAPEKKETTVK
Sbjct: 421 HAAATMKFLSSGKEQKPKPKEKMKMKPEKPSLPKCGAQAGIKISSVHKRPAPEKKETTVK 480
Query: 481 KAVVVPARSEALGKEAACESSTPSWASDHNYNAVKPEKTAAPSPSLLYK 529
KAVVVPARSEALGKEAACESSTPSWASDHNYNAVKPEKTAAPSPSLLYK
Sbjct: 481 KAVVVPARSEALGKEAACESSTPSWASDHNYNAVKPEKTAAPSPSLLYK 529
>gi|71044477 death inducer-obliterator 1 isoform b [Homo sapiens]
Length = 1189
Score = 1082 bits (2798), Expect = 0.0
Identities = 529/529 (100%), Positives = 529/529 (100%)
Query: 1 MDDKGDPSNEEAPKAIKPTSKEFRKTWGFRRTTIAKREGAGDAEADPLEPPPPQQQLGLS 60
MDDKGDPSNEEAPKAIKPTSKEFRKTWGFRRTTIAKREGAGDAEADPLEPPPPQQQLGLS
Sbjct: 1 MDDKGDPSNEEAPKAIKPTSKEFRKTWGFRRTTIAKREGAGDAEADPLEPPPPQQQLGLS 60
Query: 61 LRRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATDAETASEGSVESASE 120
LRRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATDAETASEGSVESASE
Sbjct: 61 LRRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATDAETASEGSVESASE 120
Query: 121 TRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQNRLRRKREQEPTERP 180
TRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQNRLRRKREQEPTERP
Sbjct: 121 TRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQNRLRRKREQEPTERP 180
Query: 181 LKGIQSRLRKKRREEGPAETVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDRESKLEG 240
LKGIQSRLRKKRREEGPAETVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDRESKLEG
Sbjct: 181 LKGIQSRLRKKRREEGPAETVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDRESKLEG 240
Query: 241 KAAQDIKDEEPGDLGRPKPECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGIS 300
KAAQDIKDEEPGDLGRPKPECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGIS
Sbjct: 241 KAAQDIKDEEPGDLGRPKPECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGIS 300
Query: 301 EARGRLLERNGEDYICPNCTILQVQDETHSETADQQEAKWRPGDADGTDCTSIGTIEQKS 360
EARGRLLERNGEDYICPNCTILQVQDETHSETADQQEAKWRPGDADGTDCTSIGTIEQKS
Sbjct: 301 EARGRLLERNGEDYICPNCTILQVQDETHSETADQQEAKWRPGDADGTDCTSIGTIEQKS 360
Query: 361 SEDQGIKGRIEKAANPSGKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILK 420
SEDQGIKGRIEKAANPSGKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILK
Sbjct: 361 SEDQGIKGRIEKAANPSGKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILK 420
Query: 421 HAAATMKFLSSGKEQKPKPKEKMKMKPEKPSLPKCGAQAGIKISSVHKRPAPEKKETTVK 480
HAAATMKFLSSGKEQKPKPKEKMKMKPEKPSLPKCGAQAGIKISSVHKRPAPEKKETTVK
Sbjct: 421 HAAATMKFLSSGKEQKPKPKEKMKMKPEKPSLPKCGAQAGIKISSVHKRPAPEKKETTVK 480
Query: 481 KAVVVPARSEALGKEAACESSTPSWASDHNYNAVKPEKTAAPSPSLLYK 529
KAVVVPARSEALGKEAACESSTPSWASDHNYNAVKPEKTAAPSPSLLYK
Sbjct: 481 KAVVVPARSEALGKEAACESSTPSWASDHNYNAVKPEKTAAPSPSLLYK 529
>gi|90093355 jumonji C domain containing histone demethylase 1
homolog D [Homo sapiens]
Length = 941
Score = 74.7 bits (182), Expect = 2e-13
Identities = 43/121 (35%), Positives = 58/121 (47%), Gaps = 21/121 (17%)
Query: 240 GKAAQDIKDEEPGDLGRPKPECEGYDPNALYCICRQPHN-NRFMICCDRCEEWFHGDCVG 298
G AA + PG P P P +YC+CRQP++ NRFMI CD C++WFHG CVG
Sbjct: 15 GAAAAAVSVAAPGRASAPPP------PPPVYCVCRQPYDVNRFMIECDICKDWFHGSCVG 68
Query: 299 ISEARGRLLERNGEDYICPNCTILQVQDETHSETADQQEAKWRPGD----ADGTDCTSIG 354
+ E ++ Y CPNC +L H + ++ W D DG+ G
Sbjct: 69 VEEHHAVDIDL----YHCPNCAVL------HGSSLMKKRRNWHRHDYTEIDDGSKPVQAG 118
Query: 355 T 355
T
Sbjct: 119 T 119
>gi|7662018 PHD finger protein 3 [Homo sapiens]
Length = 2039
Score = 71.6 bits (174), Expect = 2e-12
Identities = 59/234 (25%), Positives = 106/234 (45%), Gaps = 37/234 (15%)
Query: 264 YDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILQ 323
+ P+ C++PH NRFM+ C RC++WFHGDCVG+S ++ + + ++Y+C C
Sbjct: 714 WTPSKQCGFCKKPHGNRFMVGCGRCDDWFHGDCVGLSLSQAQQMGEEDKEYVCVKCC--- 770
Query: 324 VQDETHSETAD------QQEAKWRPGDADGTDCTSIGTIEQKSSEDQGIKGRIEKAANPS 377
+++ +E D Q ++ GD +C +G + + ++ D+ K + +
Sbjct: 771 AEEDKKTEILDPDTLENQATVEFHSGDKT-MECEKLG-LSKHTTNDR------TKYIDDT 822
Query: 378 GKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILKHAAATMKFLSSGKEQKP 437
K K+KI + + G G +S C ++ I K A ++ + +
Sbjct: 823 VKHKVKILK---------RESGEG------RNSSDCRDNEIKKWQLAPLRKMGQPVLPRR 867
Query: 438 KPKEKMKMKPEKPSLPKCGAQAGIKISSVHKRPAPEKKETTVKKAV--VVPARS 489
+EK + P++ + C G K S E K+ V+K V V PA S
Sbjct: 868 SSEEKSEKIPKESTTVTC---TGEKASKPGTHEKQEMKKKKVEKGVLNVHPAAS 918
>gi|156142182 CXXC finger 1 (PHD domain) isoform 1 [Homo sapiens]
Length = 660
Score = 66.2 bits (160), Expect = 7e-11
Identities = 31/75 (41%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 245 DIKDEEPGDLGRPKPECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARG 304
D D EP D G + E + +YCICR+P N FMI CD C EWFHGDC+ I+E
Sbjct: 4 DGSDPEPPDAGEDS-KSENGENAPIYCICRKPDINCFMIGCDNCNEWFHGDCIRITEKMA 62
Query: 305 RLLERNGEDYICPNC 319
+ + ++ C C
Sbjct: 63 KAI----REWYCREC 73
Score = 42.7 bits (99), Expect = 9e-04
Identities = 17/28 (60%), Positives = 21/28 (75%)
Query: 396 KCIGPGCCHVAQPDSVYCSNDCILKHAA 423
+C+GPGC AQP S YCS+DC +K AA
Sbjct: 378 QCLGPGCVRPAQPSSKYCSDDCGMKLAA 405
>gi|156142180 CXXC finger 1 (PHD domain) isoform 2 [Homo sapiens]
Length = 656
Score = 66.2 bits (160), Expect = 7e-11
Identities = 31/75 (41%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 245 DIKDEEPGDLGRPKPECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARG 304
D D EP D G + E + +YCICR+P N FMI CD C EWFHGDC+ I+E
Sbjct: 4 DGSDPEPPDAGEDS-KSENGENAPIYCICRKPDINCFMIGCDNCNEWFHGDCIRITEKMA 62
Query: 305 RLLERNGEDYICPNC 319
+ + ++ C C
Sbjct: 63 KAI----REWYCREC 73
Score = 42.7 bits (99), Expect = 9e-04
Identities = 17/28 (60%), Positives = 21/28 (75%)
Query: 396 KCIGPGCCHVAQPDSVYCSNDCILKHAA 423
+C+GPGC AQP S YCS+DC +K AA
Sbjct: 374 QCLGPGCVRPAQPSSKYCSDDCGMKLAA 401
>gi|117190342 PHD finger protein 2 [Homo sapiens]
Length = 1096
Score = 64.7 bits (156), Expect = 2e-10
Identities = 31/81 (38%), Positives = 47/81 (58%), Gaps = 14/81 (17%)
Query: 269 LYCICRQPHN-NRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILQVQDE 327
+YC+CR P++ RFMI CD C++WFHG CVG+ E + + Y CPNC ++
Sbjct: 6 VYCVCRLPYDVTRFMIECDACKDWFHGSCVGVEEEEAPDI----DIYHCPNC------EK 55
Query: 328 THSETADQQEAKWR---PGDA 345
TH ++ +++ W PG A
Sbjct: 56 THGKSTLKKKRTWHKHGPGQA 76
>gi|32698700 PHD finger protein 8 [Homo sapiens]
Length = 1024
Score = 63.9 bits (154), Expect = 4e-10
Identities = 26/55 (47%), Positives = 37/55 (67%), Gaps = 5/55 (9%)
Query: 269 LYCICRQPHN-NRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTIL 322
+YC+CR P++ RFMI CD C++WFHG CVG+ E + ++ Y CPNC +L
Sbjct: 6 VYCLCRLPYDVTRFMIECDMCQDWFHGSCVGVEEEKAADIDL----YHCPNCEVL 56
>gi|38788260 bromodomain PHD finger transcription factor isoform 2
[Homo sapiens]
Length = 2903
Score = 63.2 bits (152), Expect = 6e-10
Identities = 24/52 (46%), Positives = 37/52 (71%), Gaps = 5/52 (9%)
Query: 269 LYCICRQPHN-NRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNC 319
LYCIC+ P++ ++F I CDRC+ W+HG CVGI ++ L+ ++Y+CP C
Sbjct: 2725 LYCICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAELI----DEYVCPQC 2772
>gi|38788274 bromodomain PHD finger transcription factor isoform 1
[Homo sapiens]
Length = 2920
Score = 63.2 bits (152), Expect = 6e-10
Identities = 24/52 (46%), Positives = 37/52 (71%), Gaps = 5/52 (9%)
Query: 269 LYCICRQPHN-NRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNC 319
LYCIC+ P++ ++F I CDRC+ W+HG CVGI ++ L+ ++Y+CP C
Sbjct: 2742 LYCICKTPYDESKFYIGCDRCQNWYHGRCVGILQSEAELI----DEYVCPQC 2789
>gi|91199543 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo
sapiens]
Length = 1858
Score = 52.0 bits (123), Expect = 1e-06
Identities = 34/136 (25%), Positives = 52/136 (38%), Gaps = 22/136 (16%)
Query: 214 PSKQEPENDQGVVSQAGKDDRESKLEGKAAQDIKDEEPGDLGRPKPECEGYDPNALYCIC 273
PS +N+ G+ + D+ S A I E G Y + CIC
Sbjct: 80 PSVLISKNEVGIFTTPNFDETSS------ATTISTSEDGS----------YGTDVTRCIC 123
Query: 274 RQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILQVQDETHSETA 333
H++ +MICCD+C W H DC+GI + + Y+C C + E
Sbjct: 124 GFTHDDGYMICCDKCSVWQHIDCMGIDR------QHIPDTYLCERCQPRNLDKERAVLLQ 177
Query: 334 DQQEAKWRPGDADGTD 349
++ GD T+
Sbjct: 178 RRKRENMSDGDTSATE 193
>gi|33636768 myeloid/lymphoid or mixed-lineage leukemia 5 [Homo
sapiens]
Length = 1858
Score = 52.0 bits (123), Expect = 1e-06
Identities = 34/136 (25%), Positives = 52/136 (38%), Gaps = 22/136 (16%)
Query: 214 PSKQEPENDQGVVSQAGKDDRESKLEGKAAQDIKDEEPGDLGRPKPECEGYDPNALYCIC 273
PS +N+ G+ + D+ S A I E G Y + CIC
Sbjct: 80 PSVLISKNEVGIFTTPNFDETSS------ATTISTSEDGS----------YGTDVTRCIC 123
Query: 274 RQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILQVQDETHSETA 333
H++ +MICCD+C W H DC+GI + + Y+C C + E
Sbjct: 124 GFTHDDGYMICCDKCSVWQHIDCMGIDR------QHIPDTYLCERCQPRNLDKERAVLLQ 177
Query: 334 DQQEAKWRPGDADGTD 349
++ GD T+
Sbjct: 178 RRKRENMSDGDTSATE 193
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 49.3 bits (116), Expect = 9e-06
Identities = 50/184 (27%), Positives = 76/184 (41%), Gaps = 21/184 (11%)
Query: 94 EDSGEPTSCPATDAETASEGSVESASETRSGPQSASTAVKERPAS------SEKVKGGDD 147
++ E S TD SEG +S E GP+ E +S E+ + G+
Sbjct: 620 KEKTEILSDDLTDKAEVSEGKAKSVGEAEDGPEGRGDGTCEEGSSGAEHWQDEEREKGEK 679
Query: 148 HDDTSDSDSDGLTLKELQNRLRRKR----EQEPTERPLKGIQSRLRKKRRE-------EG 196
+ + G KEL + K+ EQE ER +G Q ++ E EG
Sbjct: 680 DKGRGEMERPGEGEKELAEKEEWKKRDGEEQEQKERE-QGHQKERNQEMEEGGEEEHGEG 738
Query: 197 PAETVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDRESKLEGKAAQDIKDEEPGDLGR 256
E E + EG K+E E ++ V + K++ E K E +A ++ K EE GD G
Sbjct: 739 EEEEGDREEEEEKEG--EGKEEGEGEE-VEGEREKEEGERKKEERAGKEEKGEEEGDQGE 795
Query: 257 PKPE 260
+ E
Sbjct: 796 GEEE 799
Score = 34.3 bits (77), Expect = 0.31
Identities = 55/276 (19%), Positives = 100/276 (36%), Gaps = 31/276 (11%)
Query: 2 DDKGDPSNEEAPKAIKPTSKEFRKTWGFRRTTIAKREGAGDAEADPLEPPPPQQQLGLSL 61
+ +GD + EE + E R+ G + + E G+ E + E +++ G
Sbjct: 652 EGRGDGTCEEGSSGAEHWQDEEREK-GEKDKGRGEMERPGEGEKELAEKEEWKKRDGEEQ 710
Query: 62 ----RRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATDAETASEGSVES 117
R G Q +R + +E+ G E+ G+ + E EG E
Sbjct: 711 EQKEREQGHQKERNQEMEE-------GGEEEHGEGEEEEGDREE----EEEKEGEGKEEG 759
Query: 118 ASETRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQNRLRRKREQEPT 177
E G + +++ + K + G++ D + + + E + R K E
Sbjct: 760 EGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEE-----ETEGRGEEKEEGGEV 814
Query: 178 ERPLKGIQSRLRKKRREEGPAETVGSEASDTV----EGVLPSKQEPENDQGVVSQAGKD- 232
E R++ EEG E E + E K E E ++G + G++
Sbjct: 815 EGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEG 874
Query: 233 -----DRESKLEGKAAQDIKDEEPGDLGRPKPECEG 263
+ E + EG+ + + EE G + E EG
Sbjct: 875 EGEGEEEEGEGEGEEEGEGEGEEEEGEGEGEEEGEG 910
Score = 30.4 bits (67), Expect = 4.5
Identities = 33/163 (20%), Positives = 60/163 (36%), Gaps = 7/163 (4%)
Query: 94 EDSGEPTSCPATDAETASEGSVESASETRSGPQSASTAVKERPASSEKVKG-GDDHDDTS 152
E+ GE + E EG E E + +E E+ +G G ++
Sbjct: 868 EEEGEEGEGEGEEEEGEGEGEEEGEGEGEE-EEGEGEGEEEGEGEGEEEEGEGKGEEEGE 926
Query: 153 DSDSDGLTLKELQNRLRRKREQEPTERPLKGIQSRLRKKRREEGPAETV-----GSEASD 207
+ + +G + + E E E +G + + EEG E G E
Sbjct: 927 EGEGEGEEEEGEGEGEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGEEEEG 986
Query: 208 TVEGVLPSKQEPENDQGVVSQAGKDDRESKLEGKAAQDIKDEE 250
EG +E ++G + G+ + E + EG+ +++ EE
Sbjct: 987 EGEGEEEEGEEEGEEEGEGEEEGEGEGEEEEEGEVEGEVEGEE 1029
>gi|18034775 PHD finger protein 20 [Homo sapiens]
Length = 1012
Score = 47.8 bits (112), Expect = 3e-05
Identities = 49/207 (23%), Positives = 80/207 (38%), Gaps = 18/207 (8%)
Query: 124 GPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQNRLRRKREQEPTERPLKG 183
GP SAS + + ++V + + + + ++ + ++K++++ +P
Sbjct: 498 GP-SASDKPSQETLTRKRVSASSPTTKDKEKNKEKKFKEFVRVKPKKKKKKKKKTKPECP 556
Query: 184 IQSRLRKKRREEGP--AETVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDRESKLEGK 241
+ +E P A V S GV S Q + G K E L
Sbjct: 557 CSEEISDTSQEPSPPKAFAVTRCGSSHKPGVHMSPQLHGPESGHHKGKVKALEEDNLSES 616
Query: 242 AAQDI--KDEEPGD----LGRPKPECEG---YDPNALYCICRQPHNNRFMICCDRCEEWF 292
+++ D+E G P E +G YD + CIC N FMI C+ C+ W
Sbjct: 617 SSESFLWSDDEYGQDVDVTTNPDEELDGDDRYDFEVVRCICEVQEENDFMIQCEECQCWQ 676
Query: 293 HGDCVGISEARGRLLERNGEDYICPNC 319
HG C+G+ E E E Y C C
Sbjct: 677 HGVCMGLLE------ENVPEKYTCYVC 697
>gi|38201655 inhibitor of growth family, member 3 isoform 1 [Homo
sapiens]
Length = 418
Score = 46.2 bits (108), Expect = 8e-05
Identities = 36/133 (27%), Positives = 54/133 (40%), Gaps = 21/133 (15%)
Query: 200 TVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDRESKLEGKAAQDIKDEEPGDLGRPKP 259
T+ AS + ++ N++ Q+ S L ++ +E P
Sbjct: 284 TLTQNASSSAADSRSGRKSKNNNKSSSQQSSSSSSSSSLSSCSSSSTVVQEISQQTTVVP 343
Query: 260 ECEG-------YDPNA-LYCICRQPHNNRFMICCDRCE---EWFHGDCVGISEA-RGRLL 307
E + YDPN YCIC Q M+ CD + EWFH CVG++EA +G+
Sbjct: 344 ESDSNSQVDWTYDPNEPRYCICNQVSYGE-MVGCDNQDCPIEWFHYGCVGLTEAPKGK-- 400
Query: 308 ERNGEDYICPNCT 320
+ CP CT
Sbjct: 401 ------WYCPQCT 407
>gi|104526627 triadin [Homo sapiens]
Length = 729
Score = 44.7 bits (104), Expect = 2e-04
Identities = 82/387 (21%), Positives = 147/387 (37%), Gaps = 57/387 (14%)
Query: 139 SEKVKGGDDHDDTSDSDSDGLTLKE--LQNRLRRKREQEPTERPLKGIQSRLRKKRREEG 196
S+ + D+ DD D D+D + E L+ + K + E E+P + IQ+++ K +E+G
Sbjct: 111 SDIISSEDEEDDDGDEDTDKGEIDEPPLRKKEIHKDKTEKQEKPERKIQTKVTHKEKEKG 170
Query: 197 P---AETVGSEASDTVEGVLPSKQEPE-----NDQGVVSQAGKDDRESKLEGKAAQDIKD 248
E E T + + K++PE +Q A K + ++K E K + K
Sbjct: 171 KEKVREKEKPEKKATHKEKIEKKEKPETKTLAKEQKKAKTAEKSEEKTKKEVKGGKQEKV 230
Query: 249 EEPG----DLGRPKPECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARG 304
++ ++ + + + + + + +++ C + + HGD
Sbjct: 231 KQTAAKVKEVQKTPSKPKEKEDKEKAAVSKHEQKDQYAFCRYMIDIFVHGD--------- 281
Query: 305 RLLERNGEDYICPNCTILQVQDETHSETA-DQQEAKWRPGDADGTDCTSIGTIEQKSSED 363
L+ I P Q T + A +++E + + + T E K E
Sbjct: 282 --LKPGQSPAIPPPLPTEQASRPTPASPALEEKEGEKKKAEKKVTS-------ETKKKEK 332
Query: 364 QGIKGRIEKAANPSGKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILKHAA 423
+ IK + EK +KK PG + G +A D + +
Sbjct: 333 EDIKKKSEKETAIDVEKK---------EPGKASETKQGTVKIAA--QAAAKKDEKKEDSK 381
Query: 424 ATMKFLS----SGKEQKPKPK--EKMKMKPEKPSLPK------CGAQAGIKISSVH-KRP 470
T K GK+Q+ K K E K ++ S+P +A +I +V K+
Sbjct: 382 KTKKPAEVEQPKGKKQEKKEKHVEPAKSPKKEHSVPSDKQVKAKTERAKEEIGAVSIKKA 441
Query: 471 APEKKETTVKKAVVVPARSEALGKEAA 497
P KKE K V R E GK ++
Sbjct: 442 VPGKKEEKTTKTVEQEIRKEKSGKTSS 468
Score = 38.1 bits (87), Expect = 0.022
Identities = 104/521 (19%), Positives = 186/521 (35%), Gaps = 101/521 (19%)
Query: 41 GDAEADPLE-PPPPQQQLGLSLRRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEP 99
GD + D E PP ++ + ++ +Q K +++ +T + + + + +P
Sbjct: 124 GDEDTDKGEIDEPPLRKKEIHKDKTEKQEKPERKIQTKVTHKEKEKGKE---KVREKEKP 180
Query: 100 TSCPATDAETASEGSVESASETRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGL 159
AT E + + A TA K + ++VKGG +
Sbjct: 181 EK-KATHKEKIEKKEKPETKTLAKEQKKAKTAEKSEEKTKKEVKGGKQEKVKQTAAK--- 236
Query: 160 TLKELQNRLRRKREQEPTERPLKGIQSRLRKKRR-------------------------- 193
+KE+Q + +E+E E K S+ +K +
Sbjct: 237 -VKEVQKTPSKPKEKEDKE---KAAVSKHEQKDQYAFCRYMIDIFVHGDLKPGQSPAIPP 292
Query: 194 ----EEGPAETVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDRESKLEGKAAQDIKDE 249
E+ T S A + EG K+ + + K+D + K E + A D++ +
Sbjct: 293 PLPTEQASRPTPASPALEEKEG--EKKKAEKKVTSETKKKEKEDIKKKSEKETAIDVEKK 350
Query: 250 EPGDLGRPKPECEGYDPNALYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLER 309
EPG K +G A ++ + E + + +G+ E+
Sbjct: 351 EPGKASETK---QGTVKIAAQAAAKKDEKKEDSKKTKKPAE--------VEQPKGKKQEK 399
Query: 310 NGEDYICPNCTILQVQDETHSETADQQEAKWRPGDADGTDCTSI-----GTIEQKSSEDQ 364
E ++ P + + HS +D+Q + SI G E+K+++
Sbjct: 400 K-EKHVEP----AKSPKKEHSVPSDKQVKAKTERAKEEIGAVSIKKAVPGKKEEKTTKTV 454
Query: 365 GIKGRIEKAANPSGKKKLKIFQPVIEAPGASKCIGPGCCHVAQPDSVYCSNDCILKHAAA 424
+ R EK+ S K K +P+ G + + P +P++
Sbjct: 455 EQEIRKEKSGKTSSILKDK--EPI---KGKEEKV-PASLKEKEPET------------KK 496
Query: 425 TMKFLSSGKEQKPKPKEKMKMKPEKPSLPKCGAQAGIKISSVHKRPAPEKKETTVKKAVV 484
K +GKE KPKP + K EKP P+ +A +PA +K K+ +V
Sbjct: 497 DEKMSKAGKEVKPKPPQLQGKKEEKPE-PQIKKEA---------KPAISEKVQIHKQDIV 546
Query: 485 VPARSEALGKEAACESSTPSWASDHNYNAVKPEKTAAPSPS 525
P ++ + GK P AV EKTA P P+
Sbjct: 547 KPEKTVSHGK--------PEEKVLKQVKAVTIEKTAKPKPT 579
>gi|239740940 PREDICTED: hypothetical protein XP_002344108 [Homo
sapiens]
Length = 168
Score = 43.9 bits (102), Expect = 4e-04
Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 267 NALYCICRQPHNNRFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNC 319
N Y + + +RF I CD C W++G+CVGI+E + + + YIC +C
Sbjct: 16 NDNYIVIFVVNTSRFYIGCDLCTNWYYGECVGIAEKEAKKM----DVYICNDC 64
>gi|110618244 retinoblastoma binding protein 2 isoform 1 [Homo
sapiens]
Length = 1690
Score = 43.9 bits (102), Expect = 4e-04
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 270 YCICRQPHNNRFMICCDRCEEWFHGDCVGI----SEARGRLLERNGEDYICPNC 319
+CICR+ + FM+ C+ C++WFH CV + S+ +G + ++CP C
Sbjct: 1163 FCICRKTASG-FMLQCELCKDWFHNSCVPLPKSSSQKKGSSWQAKEVKFLCPLC 1215
Score = 41.2 bits (95), Expect = 0.003
Identities = 23/62 (37%), Positives = 32/62 (51%), Gaps = 9/62 (14%)
Query: 262 EGYDPNALYCI--CRQPHNNR--FMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICP 317
E D NA+ C++P ++ ++ C C+EWFH CVG+S EDYIC
Sbjct: 1602 ESDDENAVCAAQNCQRPCKDKVDWVQCDGGCDEWFHQVCVGVSPEMA-----ENEDYICI 1656
Query: 318 NC 319
NC
Sbjct: 1657 NC 1658
>gi|110618242 retinoblastoma binding protein 2 isoform 2 [Homo
sapiens]
Length = 1641
Score = 43.9 bits (102), Expect = 4e-04
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 5/54 (9%)
Query: 270 YCICRQPHNNRFMICCDRCEEWFHGDCVGI----SEARGRLLERNGEDYICPNC 319
+CICR+ + FM+ C+ C++WFH CV + S+ +G + ++CP C
Sbjct: 1163 FCICRKTASG-FMLQCELCKDWFHNSCVPLPKSSSQKKGSSWQAKEVKFLCPLC 1215
>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 [Homo
sapiens]
Length = 1125
Score = 43.9 bits (102), Expect = 4e-04
Identities = 40/183 (21%), Positives = 68/183 (37%), Gaps = 6/183 (3%)
Query: 47 PLEPPPPQQQLGLSLRRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATD 106
P + PPP QQ R RQ + R ++ R GRRS +E+ E D
Sbjct: 947 PSQQPPPTQQQPQQFRNDNRQQFNSGRDQE------RFGRRSFGNRVENDRERYGNRNDD 1000
Query: 107 AETASEGSVESASETRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQN 166
+ ++ E + + + R +S + + D D S + + KE
Sbjct: 1001 RDNSNRDRREWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEEARGKEKPE 1060
Query: 167 RLRRKREQEPTERPLKGIQSRLRKKRREEGPAETVGSEASDTVEGVLPSKQEPENDQGVV 226
R + E P+ + + E+G +E + S+ + S EPE D G
Sbjct: 1061 VTDRAGGNKTVEPPISQVGNVDTASELEKGVSEAAVLKPSEELPAEATSSVEPEKDSGSA 1120
Query: 227 SQA 229
++A
Sbjct: 1121 AEA 1123
>gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 [Homo
sapiens]
Length = 1132
Score = 43.9 bits (102), Expect = 4e-04
Identities = 40/183 (21%), Positives = 68/183 (37%), Gaps = 6/183 (3%)
Query: 47 PLEPPPPQQQLGLSLRRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATD 106
P + PPP QQ R RQ + R ++ R GRRS +E+ E D
Sbjct: 954 PSQQPPPTQQQPQQFRNDNRQQFNSGRDQE------RFGRRSFGNRVENDRERYGNRNDD 1007
Query: 107 AETASEGSVESASETRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQN 166
+ ++ E + + + R +S + + D D S + + KE
Sbjct: 1008 RDNSNRDRREWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEEARGKEKPE 1067
Query: 167 RLRRKREQEPTERPLKGIQSRLRKKRREEGPAETVGSEASDTVEGVLPSKQEPENDQGVV 226
R + E P+ + + E+G +E + S+ + S EPE D G
Sbjct: 1068 VTDRAGGNKTVEPPISQVGNVDTASELEKGVSEAAVLKPSEELPAEATSSVEPEKDSGSA 1127
Query: 227 SQA 229
++A
Sbjct: 1128 AEA 1130
>gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [Homo
sapiens]
Length = 1147
Score = 43.9 bits (102), Expect = 4e-04
Identities = 40/183 (21%), Positives = 68/183 (37%), Gaps = 6/183 (3%)
Query: 47 PLEPPPPQQQLGLSLRRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATD 106
P + PPP QQ R RQ + R ++ R GRRS +E+ E D
Sbjct: 969 PSQQPPPTQQQPQQFRNDNRQQFNSGRDQE------RFGRRSFGNRVENDRERYGNRNDD 1022
Query: 107 AETASEGSVESASETRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQN 166
+ ++ E + + + R +S + + D D S + + KE
Sbjct: 1023 RDNSNRDRREWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEEARGKEKPE 1082
Query: 167 RLRRKREQEPTERPLKGIQSRLRKKRREEGPAETVGSEASDTVEGVLPSKQEPENDQGVV 226
R + E P+ + + E+G +E + S+ + S EPE D G
Sbjct: 1083 VTDRAGGNKTVEPPISQVGNVDTASELEKGVSEAAVLKPSEELPAEATSSVEPEKDSGSA 1142
Query: 227 SQA 229
++A
Sbjct: 1143 AEA 1145
>gi|27262628 nuclear autoantigenic sperm protein isoform 2 [Homo
sapiens]
Length = 788
Score = 43.5 bits (101), Expect = 5e-04
Identities = 53/242 (21%), Positives = 96/242 (39%), Gaps = 31/242 (12%)
Query: 33 TIAKREGAGDAEADPLEPPPPQQQLGLSLRRSGRQPKRTERVEQFLTIARRRGRRSMPVS 92
T+ K+ A + EA+ L+P +G G +P+ E+ +T G+ +
Sbjct: 285 TLEKQGTAVEVEAESLDPTVKPVDVG------GDEPE-----EKVVTSENEAGKAVLEQL 333
Query: 93 LEDSGEPTS-CPATDAETASEGSVESASETRSGP-QSASTAVKERPASSEKVKGGDDHDD 150
+ P P E A +VE+ SE P Q A K+ + V G +
Sbjct: 334 VGQEVPPAEESPEVTTEAAEASAVEAGSEVSEKPGQEAPVLPKDGAVNGPSVVGDQTPIE 393
Query: 151 --------TSDSDSDGLT----LKELQNRLRRKREQEPTERPLKGIQSRLRKKRREEGPA 198
T D GL K + ++ K E +E G+ +++ + E+ P
Sbjct: 394 PQTSIERLTETKDGSGLEEKVRAKLVPSQEETKLSVEESEAAGDGVDTKVAQGATEKSPE 453
Query: 199 ETVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDR------ESKLEGKAAQDIKDEEPG 252
+ V A++ + +E E +G ++D+ +S LE K+ Q+ ++EE G
Sbjct: 454 DKVQIAANEETQEREEQMKEGEETEGSEEDDKENDKTEEMPNDSVLENKSLQENEEEEIG 513
Query: 253 DL 254
+L
Sbjct: 514 NL 515
>gi|27262634 nuclear autoantigenic sperm protein isoform 1 [Homo
sapiens]
Length = 790
Score = 43.5 bits (101), Expect = 5e-04
Identities = 53/242 (21%), Positives = 96/242 (39%), Gaps = 31/242 (12%)
Query: 33 TIAKREGAGDAEADPLEPPPPQQQLGLSLRRSGRQPKRTERVEQFLTIARRRGRRSMPVS 92
T+ K+ A + EA+ L+P +G G +P+ E+ +T G+ +
Sbjct: 287 TLEKQGTAVEVEAESLDPTVKPVDVG------GDEPE-----EKVVTSENEAGKAVLEQL 335
Query: 93 LEDSGEPTS-CPATDAETASEGSVESASETRSGP-QSASTAVKERPASSEKVKGGDDHDD 150
+ P P E A +VE+ SE P Q A K+ + V G +
Sbjct: 336 VGQEVPPAEESPEVTTEAAEASAVEAGSEVSEKPGQEAPVLPKDGAVNGPSVVGDQTPIE 395
Query: 151 --------TSDSDSDGLT----LKELQNRLRRKREQEPTERPLKGIQSRLRKKRREEGPA 198
T D GL K + ++ K E +E G+ +++ + E+ P
Sbjct: 396 PQTSIERLTETKDGSGLEEKVRAKLVPSQEETKLSVEESEAAGDGVDTKVAQGATEKSPE 455
Query: 199 ETVGSEASDTVEGVLPSKQEPENDQGVVSQAGKDDR------ESKLEGKAAQDIKDEEPG 252
+ V A++ + +E E +G ++D+ +S LE K+ Q+ ++EE G
Sbjct: 456 DKVQIAANEETQEREEQMKEGEETEGSEEDDKENDKTEEMPNDSVLENKSLQENEEEEIG 515
Query: 253 DL 254
+L
Sbjct: 516 NL 517
>gi|116268091 PHD finger protein 23 [Homo sapiens]
Length = 403
Score = 43.1 bits (100), Expect = 7e-04
Identities = 65/289 (22%), Positives = 98/289 (33%), Gaps = 32/289 (11%)
Query: 35 AKREGAGDAEADPLEPPPPQQQLG-LSLRRSGRQPKRTERVEQFLTIARRRGRRSM-PVS 92
AK A+A P +P PP+ L S ++ + + + + + P S
Sbjct: 94 AKSSKRRAAQAGPTQPGPPRSTFSRLQAPDSATLLEKMKLKDSLFDLDGPKVASPLSPTS 153
Query: 93 LEDSGEP----TSCPATDAETASEGSVESASETRSGPQS-ASTAVKERPASSEKVKGGDD 147
L + P T P + + + + + GP + A V RP + GD
Sbjct: 154 LTHTSRPPAALTPVPLSQGDLSHPPRKKDRKNRKLGPGAGAGFGVLRRPRPTP----GDG 209
Query: 148 HDDTSDSDSDGLTLKELQNRLRRKREQEPTERPLKGIQSRLRKKRREEGPAE----TVGS 203
+ S LK+ + R R P + P S ++ EE E VG
Sbjct: 210 EKRSRIKKSKKRKLKKAE-RGDRLPPPGPPQAPPSDTDSEEEEEEEEEEEEEEMATVVGG 268
Query: 204 EASDTVEGVLPSKQEPENDQGVVSQAGKDDRESKLEGKAAQDIKDEEPGDLGRPKPECEG 263
EA V LP+ E V G +S E K + + GD + E
Sbjct: 269 EAPVPV---LPTPPEAPRPPATVHPEGVPPADS--ESKEVGSTETSQDGDASSSEGEMRV 323
Query: 264 YDPNALY-----------CICRQPHNNRFMICCDRCEEWFHGDCVGISE 301
D + + C CR+P R MI C C W H C I +
Sbjct: 324 MDEDIMVESGDDSWDLITCYCRKPFAGRPMIECSLCGTWIHLSCAKIKK 372
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 42.7 bits (99), Expect = 9e-04
Identities = 36/157 (22%), Positives = 67/157 (42%), Gaps = 18/157 (11%)
Query: 106 DAETASEGSVESASETRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQ 165
+ ET EG E SE + + +ER ++ +G + G KE +
Sbjct: 44 EIETRKEGKKERESERKKERREREKRKREREKERKRERG--------KKEKKGERKKEER 95
Query: 166 NRLRRKREQEPTERPLKGIQSRLRKKRREEGPAETVGSEASDTVEGVLPSKQEPENDQGV 225
R +R+RE+E E K + R +K+++E G G E K+E + ++
Sbjct: 96 ERKKRRREKENKEGEEK--EKRKKKEKKERGRTSKEGKERE--------RKEERKREERK 145
Query: 226 VSQAGKDDRESKLEGKAAQDIKDEEPGDLGRPKPECE 262
+ K++RE + E K + + ++ G+ + E E
Sbjct: 146 ERERKKEEREKERERKERKKRERKQVGEKEEERKEKE 182
Score = 31.6 bits (70), Expect = 2.0
Identities = 29/133 (21%), Positives = 48/133 (36%), Gaps = 4/133 (3%)
Query: 62 RRSGRQPKRTERVEQFLTIARRRGRRSMPVSLEDSGEPTSCPATDAETASEGSVESASET 121
R G++ K+ ER ++ +RR + E T+ EG E
Sbjct: 79 RERGKKEKKGERKKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGKERERKEE 138
Query: 122 RSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQNRLRRKREQEPTERPL 181
R + K+ E+ + + KE + + R+KRE+ ER
Sbjct: 139 RKREERKERERKKEEREKERERKERKKRERKQVGEKEEERKEKERKERKKRERNRKERK- 197
Query: 182 KGIQSRLRKKRRE 194
+ R RK+RRE
Sbjct: 198 ---KERERKERRE 207
>gi|169211979 PREDICTED: hypothetical protein [Homo sapiens]
Length = 168
Score = 42.7 bits (99), Expect = 9e-04
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 6/52 (11%)
Query: 280 RFMICCDRCEEWFHGDCVGISEARGRLLERNGEDYICPNCTILQVQDETHSE 331
RF I CD C W++G+CVGI+E + + + YIC +C Q Q+ + E
Sbjct: 29 RFYIGCDLCTNWYYGECVGIAEKEAKKM----DVYICNDCK--QAQEGSSEE 74
>gi|239735592 TRAF2 and NCK interacting kinase isoform 8 [Homo
sapiens]
Length = 1268
Score = 42.7 bits (99), Expect = 9e-04
Identities = 49/185 (26%), Positives = 73/185 (39%), Gaps = 14/185 (7%)
Query: 63 RSGRQPKRTERVEQFLT--IARRRGRRSMPVSLEDSGEPTSCPATDAETASEGSVESASE 120
R G QP R + T I +R+ S S P+S P++ + S+
Sbjct: 614 RLGSQPIRASNPDLRRTEPILESPLQRTSSGSSSSSSTPSSQPSSQGGSQPGSQAGSSER 673
Query: 121 TRSGPQSASTAVKERPASSEKVKGGDDHDDTSDSDSDGLTLKELQNRLRRKREQEPTERP 180
TR S S P KVK + D T S LT L LR R +E T RP
Sbjct: 674 TRVRANSKSEGSPVLPHEPAKVKPEESRDITRPSRPADLTA--LAKELRELRIEE-TNRP 730
Query: 181 LKGI--------QSRLRKKRREEGPAET-VGSEASDTVEGVLPSKQEPENDQGVVSQAGK 231
+K + +S ++ E+G +ET G+ A + ++P+ N+Q V G
Sbjct: 731 MKKVTDYSSSSEESESSEEEEEDGESETHDGTVAVSDIPRLIPTGAPGSNEQYNVGMVGT 790
Query: 232 DDRES 236
E+
Sbjct: 791 HGLET 795
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.310 0.129 0.385
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,156,731
Number of Sequences: 37866
Number of extensions: 1410513
Number of successful extensions: 6677
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 410
Number of HSP's that attempted gapping in prelim test: 5872
Number of HSP's gapped (non-prelim): 1124
length of query: 562
length of database: 18,247,518
effective HSP length: 107
effective length of query: 455
effective length of database: 14,195,856
effective search space: 6459114480
effective search space used: 6459114480
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.