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Search of human proteins with 18087809
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|18087809 ATP binding domain 4 isoform 1 [Homo sapiens]
(267 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|18087809 ATP binding domain 4 isoform 1 [Homo sapiens] 535 e-152
gi|213972615 ATP binding domain 4 isoform 2 [Homo sapiens] 216 2e-56
gi|120587023 down-regulated in metastasis [Homo sapiens] 33 0.34
gi|89036565 PREDICTED: similar to Temporarily Assigned Gene name... 33 0.34
gi|45446749 kinesin family member 5A [Homo sapiens] 32 0.44
gi|4758650 kinesin family member 5C [Homo sapiens] 32 0.58
gi|190358520 follistatin-like 5 isoform a [Homo sapiens] 31 0.99
gi|190358524 follistatin-like 5 isoform c [Homo sapiens] 30 1.7
gi|190358522 follistatin-like 5 isoform b [Homo sapiens] 30 1.7
gi|239753874 PREDICTED: similar to hCG2036814 [Homo sapiens] 30 2.2
gi|239748437 PREDICTED: similar to hCG2036814 [Homo sapiens] 30 2.2
gi|239742371 PREDICTED: hypothetical protein XP_002342504 [Homo ... 30 2.2
gi|216548091 leucine zipper protein 1 [Homo sapiens] 30 2.2
gi|216548085 leucine zipper protein 1 [Homo sapiens] 30 2.2
gi|4507813 UDP-glucose dehydrogenase [Homo sapiens] 29 3.8
gi|109452589 family with sequence similarity 98, member B isofor... 29 3.8
gi|109452587 family with sequence similarity 98, member B isofor... 29 3.8
gi|50811873 suppressor of hairy wing homolog 4 isoform 2 [Homo s... 29 3.8
gi|50811875 suppressor of hairy wing homolog 4 isoform 3 [Homo s... 29 3.8
gi|50811871 suppressor of hairy wing homolog 4 isoform 1 [Homo s... 29 3.8
gi|154277118 spectrin repeat containing, nuclear envelope 1 isof... 29 4.9
gi|154277116 spectrin repeat containing, nuclear envelope 1 isof... 29 4.9
gi|5454084 serine palmitoyltransferase subunit 1 isoform a [Homo... 28 6.4
gi|122937396 coiled-coil domain containing 150 [Homo sapiens] 28 6.4
gi|26080431 ATPase family, AAA domain containing 5 [Homo sapiens] 28 8.4
>gi|18087809 ATP binding domain 4 isoform 1 [Homo sapiens]
Length = 267
Score = 535 bits (1377), Expect = e-152
Identities = 267/267 (100%), Positives = 267/267 (100%)
Query: 1 MRVAALISGGKDSCYNMMQCIAAGHQIVALANLRPAENQVGSDELDSYMYQTVGHHAIDL 60
MRVAALISGGKDSCYNMMQCIAAGHQIVALANLRPAENQVGSDELDSYMYQTVGHHAIDL
Sbjct: 1 MRVAALISGGKDSCYNMMQCIAAGHQIVALANLRPAENQVGSDELDSYMYQTVGHHAIDL 60
Query: 61 YAEAMALPLYRRTIRGRSLDTRQVYTKCEGDEVEDLYELLKLVKEKEEVEGISVGAILSD 120
YAEAMALPLYRRTIRGRSLDTRQVYTKCEGDEVEDLYELLKLVKEKEEVEGISVGAILSD
Sbjct: 61 YAEAMALPLYRRTIRGRSLDTRQVYTKCEGDEVEDLYELLKLVKEKEEVEGISVGAILSD 120
Query: 121 YQRIRVENVCKRLNLQPLAYLWQRNQEDLLREMISSNIQAMIIKVAALGLDPDKHLGKTL 180
YQRIRVENVCKRLNLQPLAYLWQRNQEDLLREMISSNIQAMIIKVAALGLDPDKHLGKTL
Sbjct: 121 YQRIRVENVCKRLNLQPLAYLWQRNQEDLLREMISSNIQAMIIKVAALGLDPDKHLGKTL 180
Query: 181 DQMEPYLIELSKKYGVHVCGEGGEYETFTLDCPLFKKKIIVDSSEVVIHSADAFAPVAYL 240
DQMEPYLIELSKKYGVHVCGEGGEYETFTLDCPLFKKKIIVDSSEVVIHSADAFAPVAYL
Sbjct: 181 DQMEPYLIELSKKYGVHVCGEGGEYETFTLDCPLFKKKIIVDSSEVVIHSADAFAPVAYL 240
Query: 241 RFLELHLEDKVSSVPDNYRTSNYIYNF 267
RFLELHLEDKVSSVPDNYRTSNYIYNF
Sbjct: 241 RFLELHLEDKVSSVPDNYRTSNYIYNF 267
>gi|213972615 ATP binding domain 4 isoform 2 [Homo sapiens]
Length = 165
Score = 216 bits (549), Expect = 2e-56
Identities = 111/147 (75%), Positives = 123/147 (83%), Gaps = 6/147 (4%)
Query: 1 MRVAALISGGKDSCYNMMQCIAAGHQIVALANLRPAENQVGSDELDSYMYQTVGHHAIDL 60
MRVAALISGGKDSCYNMMQCIAAGHQIVALANLRPAENQVGSDELDSYMYQTVGHHAIDL
Sbjct: 1 MRVAALISGGKDSCYNMMQCIAAGHQIVALANLRPAENQVGSDELDSYMYQTVGHHAIDL 60
Query: 61 YAEAMALPLYRRTIRGRSLDTRQVYTKCEGDEVEDLYELLKLVKEKEEVEGISVGAILSD 120
YAEAMALPLYRRTIRGRSLDTRQVYTKCEGDEVEDLYELLKLVK GI+ +L++
Sbjct: 61 YAEAMALPLYRRTIRGRSLDTRQVYTKCEGDEVEDLYELLKLVK------GITRMTLLAE 114
Query: 121 YQRIRVENVCKRLNLQPLAYLWQRNQE 147
Y + +++ L + A +++ E
Sbjct: 115 YDALNLQDFHMHLKVGSQAIVYRTPNE 141
>gi|120587023 down-regulated in metastasis [Homo sapiens]
Length = 2785
Score = 32.7 bits (73), Expect = 0.34
Identities = 19/79 (24%), Positives = 42/79 (53%), Gaps = 10/79 (12%)
Query: 90 GDEVEDLYELLKLVKEKEEVEGISVGAILSDYQRIRVENVCKRLNLQPLAYLWQRNQEDL 149
GD + L++ L ++EE + +++D + +RV PLA+ + + L
Sbjct: 1785 GDILPRLHKCLASTTKREEEHKLVKSKVVNDEEVVRV----------PLAFAMVKLMQSL 1834
Query: 150 LREMISSNIQAMIIKVAAL 168
+E++ +N+ ++++KV AL
Sbjct: 1835 PQEVMEANLPSILLKVCAL 1853
>gi|89036565 PREDICTED: similar to Temporarily Assigned Gene name
family member (tag-184) [Homo sapiens]
Length = 2785
Score = 32.7 bits (73), Expect = 0.34
Identities = 19/79 (24%), Positives = 42/79 (53%), Gaps = 10/79 (12%)
Query: 90 GDEVEDLYELLKLVKEKEEVEGISVGAILSDYQRIRVENVCKRLNLQPLAYLWQRNQEDL 149
GD + L++ L ++EE + +++D + +RV PLA+ + + L
Sbjct: 1785 GDILPRLHKCLASTTKREEEHKLVKSKVVNDEEVVRV----------PLAFAMVKLMQSL 1834
Query: 150 LREMISSNIQAMIIKVAAL 168
+E++ +N+ ++++KV AL
Sbjct: 1835 PQEVMEANLPSILLKVCAL 1853
>gi|45446749 kinesin family member 5A [Homo sapiens]
Length = 1032
Score = 32.3 bits (72), Expect = 0.44
Identities = 22/76 (28%), Positives = 42/76 (55%), Gaps = 15/76 (19%)
Query: 91 DEVEDLYELLKLVKEKEEVEGISVGAILSDYQRIRVENVCKRLNLQPLAYLWQRNQ---E 147
DE++DL + L+L EK + +DY++++ E K LQ L +L++R++ +
Sbjct: 729 DELKDLNQKLQLELEK----------LQADYEKLKSEEHEKSTKLQELTFLYERHEQSKQ 778
Query: 148 DL--LREMISSNIQAM 161
DL L E ++ +Q +
Sbjct: 779 DLKGLEETVARELQTL 794
>gi|4758650 kinesin family member 5C [Homo sapiens]
Length = 957
Score = 32.0 bits (71), Expect = 0.58
Identities = 22/76 (28%), Positives = 40/76 (52%), Gaps = 15/76 (19%)
Query: 91 DEVEDLYELLKLVKEKEEVEGISVGAILSDYQRIRVENVCKRLNLQPLAYLWQRNQ---E 147
DE+ DL + L+L +EK + SDY ++++E+ + + L+ L L + + E
Sbjct: 733 DEIRDLNQKLQLEQEK----------LSSDYNKLKIEDQEREMKLEKLLLLNDKREQARE 782
Query: 148 DL--LREMISSNIQAM 161
DL L E +S +Q +
Sbjct: 783 DLKGLEETVSRELQTL 798
>gi|190358520 follistatin-like 5 isoform a [Homo sapiens]
Length = 847
Score = 31.2 bits (69), Expect = 0.99
Identities = 24/108 (22%), Positives = 46/108 (42%), Gaps = 17/108 (15%)
Query: 135 LQPLAYLWQRNQEDLLREMISSNIQAMIIKVAALGLDPDKHLG--------KTLDQMEPY 186
L L + ++NQE SS ++ +I+ G +K+ G + Q E
Sbjct: 36 LMRLRHKQEKNQE-------SSRVKGFMIQDGPFGSCENKYCGLGRHCVTSRETGQAECA 88
Query: 187 LIELSKKYGVHVCGEGGEYETFTLDCPLFKKKIIVDSSEVVIHSADAF 234
++L K++ VCG GE+ + C + + + ++H+ D F
Sbjct: 89 CMDLCKRHYKPVCGSDGEF--YENHCEVHRAACLKKQKITIVHNEDCF 134
>gi|190358524 follistatin-like 5 isoform c [Homo sapiens]
Length = 837
Score = 30.4 bits (67), Expect = 1.7
Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 19/109 (17%)
Query: 136 QPLAYLW--QRNQEDLLREMISSNIQAMIIKVAALGLDPDKHLG--------KTLDQMEP 185
QPL L ++NQE SS ++ +I+ G +K+ G + Q E
Sbjct: 34 QPLMRLRHKEKNQE-------SSRVKGFMIQDGPFGSCENKYCGLGRHCVTSRETGQAEC 86
Query: 186 YLIELSKKYGVHVCGEGGEYETFTLDCPLFKKKIIVDSSEVVIHSADAF 234
++L K++ VCG GE+ + C + + + ++H+ D F
Sbjct: 87 ACMDLCKRHYKPVCGSDGEF--YENHCEVHRAACLKKQKITIVHNEDCF 133
>gi|190358522 follistatin-like 5 isoform b [Homo sapiens]
Length = 846
Score = 30.4 bits (67), Expect = 1.7
Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 19/109 (17%)
Query: 136 QPLAYLW--QRNQEDLLREMISSNIQAMIIKVAALGLDPDKHLG--------KTLDQMEP 185
QPL L ++NQE SS ++ +I+ G +K+ G + Q E
Sbjct: 34 QPLMRLRHKEKNQE-------SSRVKGFMIQDGPFGSCENKYCGLGRHCVTSRETGQAEC 86
Query: 186 YLIELSKKYGVHVCGEGGEYETFTLDCPLFKKKIIVDSSEVVIHSADAF 234
++L K++ VCG GE+ + C + + + ++H+ D F
Sbjct: 87 ACMDLCKRHYKPVCGSDGEF--YENHCEVHRAACLKKQKITIVHNEDCF 133
>gi|239753874 PREDICTED: similar to hCG2036814 [Homo sapiens]
Length = 547
Score = 30.0 bits (66), Expect = 2.2
Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 12/117 (10%)
Query: 90 GDEVEDLYELLKLVKEKEEVEGISVGAILSDYQRIRVENVCKRLNL-QPLAYLWQRNQE- 147
G EV D ++++ V I +LS+ Q +N K L QPL+ ++ N +
Sbjct: 395 GQEVTDPVQMIQRTCLATNVMTIQQATLLSNIQLFSGQNRLKDFKLNQPLSSVFGSNSKV 454
Query: 148 ---DLLREMISS---NIQAMII----KVAALGLDPDKHLGKTLDQMEPYLIELSKKY 194
+E++ N A++ K+ GL DK+L + D ++ L + KY
Sbjct: 455 QFLSQFKELLGHAWMNYTAILFTHAEKIEEAGLTEDKYLHEASDTLKTLLNSIQHKY 511
>gi|239748437 PREDICTED: similar to hCG2036814 [Homo sapiens]
Length = 547
Score = 30.0 bits (66), Expect = 2.2
Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 12/117 (10%)
Query: 90 GDEVEDLYELLKLVKEKEEVEGISVGAILSDYQRIRVENVCKRLNL-QPLAYLWQRNQE- 147
G EV D ++++ V I +LS+ Q +N K L QPL+ ++ N +
Sbjct: 395 GQEVTDPVQMIQRTCLATNVMTIQQATLLSNIQLFSGQNRLKDFKLNQPLSSVFGSNSKV 454
Query: 148 ---DLLREMISS---NIQAMII----KVAALGLDPDKHLGKTLDQMEPYLIELSKKY 194
+E++ N A++ K+ GL DK+L + D ++ L + KY
Sbjct: 455 QFLSQFKELLGHAWMNYTAILFTHAEKIEEAGLTEDKYLHEASDTLKTLLNSIQHKY 511
>gi|239742371 PREDICTED: hypothetical protein XP_002342504 [Homo
sapiens]
Length = 547
Score = 30.0 bits (66), Expect = 2.2
Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 12/117 (10%)
Query: 90 GDEVEDLYELLKLVKEKEEVEGISVGAILSDYQRIRVENVCKRLNL-QPLAYLWQRNQE- 147
G EV D ++++ V I +LS+ Q +N K L QPL+ ++ N +
Sbjct: 395 GQEVTDPVQMIQRTCLATNVMTIQQATLLSNIQLFSGQNRLKDFKLNQPLSSVFGSNSKV 454
Query: 148 ---DLLREMISS---NIQAMII----KVAALGLDPDKHLGKTLDQMEPYLIELSKKY 194
+E++ N A++ K+ GL DK+L + D ++ L + KY
Sbjct: 455 QFLSQFKELLGHAWMNYTAILFTHAEKIEEAGLTEDKYLHEASDTLKTLLNSIQHKY 511
>gi|216548091 leucine zipper protein 1 [Homo sapiens]
Length = 1076
Score = 30.0 bits (66), Expect = 2.2
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 11/119 (9%)
Query: 82 RQVYTKCEG--DEVEDLYELLKLVKEKEEVEGISVGAILSDYQRI--------RVENVCK 131
RQ + EG +E++ +L +L+KEK E E + S+ +R+ ++E
Sbjct: 69 RQRVLRIEGKDEEIKRAEDLCRLMKEKLEEEENLTRELKSEIERLQKRMAELEKLEEAFS 128
Query: 132 RLNLQPLAYLWQRNQEDLLREMISSNIQAMIIKVAALGLDPDKHLGKTLDQMEPYLIEL 190
R N+E L + ISS ++ + +KV L D+ L KT + L +L
Sbjct: 129 RSKNDCTQLCLSLNEERNLTKKISSELEMLRVKVKELESSEDR-LDKTEQSLASELEKL 186
>gi|216548085 leucine zipper protein 1 [Homo sapiens]
Length = 1076
Score = 30.0 bits (66), Expect = 2.2
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 11/119 (9%)
Query: 82 RQVYTKCEG--DEVEDLYELLKLVKEKEEVEGISVGAILSDYQRI--------RVENVCK 131
RQ + EG +E++ +L +L+KEK E E + S+ +R+ ++E
Sbjct: 69 RQRVLRIEGKDEEIKRAEDLCRLMKEKLEEEENLTRELKSEIERLQKRMAELEKLEEAFS 128
Query: 132 RLNLQPLAYLWQRNQEDLLREMISSNIQAMIIKVAALGLDPDKHLGKTLDQMEPYLIEL 190
R N+E L + ISS ++ + +KV L D+ L KT + L +L
Sbjct: 129 RSKNDCTQLCLSLNEERNLTKKISSELEMLRVKVKELESSEDR-LDKTEQSLASELEKL 186
>gi|4507813 UDP-glucose dehydrogenase [Homo sapiens]
Length = 494
Score = 29.3 bits (64), Expect = 3.8
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 10/96 (10%)
Query: 113 SVGAILSDYQR--IRVENVCKRLNLQPLAYLWQR--NQEDLLREMISSNIQAMII----- 163
SVG S +Q+ + + +C+ LNL +A WQ+ + D R +S I +
Sbjct: 269 SVGFGGSCFQKDVLNLVYLCEALNLPEVARYWQQVIDMNDYQRRRFASRIIDSLFNTVTD 328
Query: 164 -KVAALGLDPDKHLGKTLDQMEPYLIELSKKYGVHV 198
K+A LG K G T + Y+ + G H+
Sbjct: 329 KKIAILGFAFKKDTGDTRESSSIYISKYLMDEGAHL 364
>gi|109452589 family with sequence similarity 98, member B isoform
2 [Homo sapiens]
Length = 330
Score = 29.3 bits (64), Expect = 3.8
Identities = 16/46 (34%), Positives = 22/46 (47%)
Query: 9 GGKDSCYNMMQCIAAGHQIVALANLRPAENQVGSDELDSYMYQTVG 54
GG S CI G QI +L NL + G D+L+S+ + G
Sbjct: 41 GGLSSPEFSELCIWLGSQIKSLCNLEESITSAGRDDLESFQLEISG 86
>gi|109452587 family with sequence similarity 98, member B isoform
1 [Homo sapiens]
Length = 433
Score = 29.3 bits (64), Expect = 3.8
Identities = 16/46 (34%), Positives = 22/46 (47%)
Query: 9 GGKDSCYNMMQCIAAGHQIVALANLRPAENQVGSDELDSYMYQTVG 54
GG S CI G QI +L NL + G D+L+S+ + G
Sbjct: 41 GGLSSPEFSELCIWLGSQIKSLCNLEESITSAGRDDLESFQLEISG 86
>gi|50811873 suppressor of hairy wing homolog 4 isoform 2 [Homo
sapiens]
Length = 966
Score = 29.3 bits (64), Expect = 3.8
Identities = 15/52 (28%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 83 QVYTKCEGDEVEDLYELLKLVKEKEEVEGISVGAILSDYQRIRVENVCKRLN 134
+++ +CE +E+E + +K V++ ++ E I VG I S + + N+ R+N
Sbjct: 3 ELFMECEEEELEPWQKKVKEVEDDDDDEPIFVGEISS--SKPAISNILNRVN 52
>gi|50811875 suppressor of hairy wing homolog 4 isoform 3 [Homo
sapiens]
Length = 158
Score = 29.3 bits (64), Expect = 3.8
Identities = 15/52 (28%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 83 QVYTKCEGDEVEDLYELLKLVKEKEEVEGISVGAILSDYQRIRVENVCKRLN 134
+++ +CE +E+E + +K V++ ++ E I VG I S + + N+ R+N
Sbjct: 16 ELFMECEEEELEPWQKKVKEVEDDDDDEPIFVGEISS--SKPAISNILNRVN 65
>gi|50811871 suppressor of hairy wing homolog 4 isoform 1 [Homo
sapiens]
Length = 979
Score = 29.3 bits (64), Expect = 3.8
Identities = 15/52 (28%), Positives = 31/52 (59%), Gaps = 2/52 (3%)
Query: 83 QVYTKCEGDEVEDLYELLKLVKEKEEVEGISVGAILSDYQRIRVENVCKRLN 134
+++ +CE +E+E + +K V++ ++ E I VG I S + + N+ R+N
Sbjct: 16 ELFMECEEEELEPWQKKVKEVEDDDDDEPIFVGEISS--SKPAISNILNRVN 65
>gi|154277118 spectrin repeat containing, nuclear envelope 1 isoform 4
[Homo sapiens]
Length = 3321
Score = 28.9 bits (63), Expect = 4.9
Identities = 41/211 (19%), Positives = 84/211 (39%), Gaps = 53/211 (25%)
Query: 29 ALANLRPAENQVGSDELDSYMYQTVG----HHAIDLYAEAMALPL--------------Y 70
A++ P+E++ G D+ D Y+ VG H A++ + L
Sbjct: 2822 AMSRALPSEDEEGQDDKDFYLRGAVGLSGDHSALESQIRQLGKALDDSRFQIQQTENIIR 2881
Query: 71 RRTIRGRSLDTR-QVYTKCEGD---EVEDLYEL-LKLVKEKEEVEGI--------SVGAI 117
+T G LDT + Y K G+ ++ + L KL +E+E + G +
Sbjct: 2882 SKTPTGPELDTSYKGYMKLLGECSSSIDSVKRLEHKLKEEEESLPGFVNLHSTETQTAGV 2941
Query: 118 LSDYQRIRVENVCKRLNLQPLAYLWQR-----------------NQEDLLREMISSNIQA 160
+ ++ ++ + + K L ++ WQ+ E L R +S++IQ
Sbjct: 2942 IDRWELLQAQALSKELRMKQNLQKWQQFNSDLNSIWAWLGDTEEELEQLQRLELSTDIQT 3001
Query: 161 MIIKVAALGLDPDKHLGKTLDQMEPYLIELS 191
+ +++ L K L K +D + ++ ++
Sbjct: 3002 IELQIKKL-----KELQKAVDHRKAIILSIN 3027
>gi|154277116 spectrin repeat containing, nuclear envelope 1 isoform 1
[Homo sapiens]
Length = 8797
Score = 28.9 bits (63), Expect = 4.9
Identities = 41/211 (19%), Positives = 84/211 (39%), Gaps = 53/211 (25%)
Query: 29 ALANLRPAENQVGSDELDSYMYQTVG----HHAIDLYAEAMALPL--------------Y 70
A++ P+E++ G D+ D Y+ VG H A++ + L
Sbjct: 8298 AMSRALPSEDEEGQDDKDFYLRGAVGLSGDHSALESQIRQLGKALDDSRFQIQQTENIIR 8357
Query: 71 RRTIRGRSLDTR-QVYTKCEGD---EVEDLYEL-LKLVKEKEEVEGI--------SVGAI 117
+T G LDT + Y K G+ ++ + L KL +E+E + G +
Sbjct: 8358 SKTPTGPELDTSYKGYMKLLGECSSSIDSVKRLEHKLKEEEESLPGFVNLHSTETQTAGV 8417
Query: 118 LSDYQRIRVENVCKRLNLQPLAYLWQR-----------------NQEDLLREMISSNIQA 160
+ ++ ++ + + K L ++ WQ+ E L R +S++IQ
Sbjct: 8418 IDRWELLQAQALSKELRMKQNLQKWQQFNSDLNSIWAWLGDTEEELEQLQRLELSTDIQT 8477
Query: 161 MIIKVAALGLDPDKHLGKTLDQMEPYLIELS 191
+ +++ L K L K +D + ++ ++
Sbjct: 8478 IELQIKKL-----KELQKAVDHRKAIILSIN 8503
>gi|5454084 serine palmitoyltransferase subunit 1 isoform a [Homo
sapiens]
Length = 473
Score = 28.5 bits (62), Expect = 6.4
Identities = 17/47 (36%), Positives = 22/47 (46%)
Query: 192 KKYGVHVCGEGGEYETFTLDCPLFKKKIIVDSSEVVIHSADAFAPVA 238
KKYGV CG G Y TF + L + +E I + FA +A
Sbjct: 126 KKYGVGTCGPRGFYGTFDVHLDLEDRLAKFMKTEEAIIYSYGFATIA 172
>gi|122937396 coiled-coil domain containing 150 [Homo sapiens]
Length = 1101
Score = 28.5 bits (62), Expect = 6.4
Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 12/90 (13%)
Query: 92 EVEDLYELLKLVKEKE-----EVEGISVGAILSDYQRIR-------VENVCKRLNLQPLA 139
EV +L + L+ VKE+E EV+ ++ ++ + ++ +++NL+
Sbjct: 156 EVMNLRQQLRAVKEEEDKAQDEVQRLTATLKIASQTKKNAAIIEEELKTTKRKMNLKIQE 215
Query: 140 YLWQRNQEDLLREMISSNIQAMIIKVAALG 169
Q QE LRE + + AM++K+ +G
Sbjct: 216 LRRQLAQEKYLRESLEKSASAMLLKIQEMG 245
>gi|26080431 ATPase family, AAA domain containing 5 [Homo sapiens]
Length = 1844
Score = 28.1 bits (61), Expect = 8.4
Identities = 11/26 (42%), Positives = 17/26 (65%)
Query: 232 DAFAPVAYLRFLELHLEDKVSSVPDN 257
D+ V+Y FL+ H E+KV +PD+
Sbjct: 260 DSIITVSYEEFLKSHKENKVEEIPDS 285
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.136 0.394
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,329,067
Number of Sequences: 37866
Number of extensions: 381605
Number of successful extensions: 882
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 872
Number of HSP's gapped (non-prelim): 28
length of query: 267
length of database: 18,247,518
effective HSP length: 100
effective length of query: 167
effective length of database: 14,460,918
effective search space: 2414973306
effective search space used: 2414973306
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.