Guide to the Human Genome
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Name: UGDH Sequence: fasta or formatted (494aa) NCBI GI: 4507813
Description:

UDP-glucose dehydrogenase

Referenced in:

Glycogen
Protein Glycosylation
N-Acetyl Sugars and Hyaluronan

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.7         38           2
 C cysteine            2.4         12           2
 D aspartate           6.1         30           2
 E glutamate           6.7         33           2
 F phenylalanine       3.8         19           2
 G glycine             6.1         30           2
 H histidine           1.6          8           1
 I isoleucine          8.3         41           2
 K lysine              7.3         36           2
 L leucine             7.1         35           1
 M methionine          1.6          8           1
 N asparagine          4.7         23           1
 P proline             4.9         24           2
 Q glutamine           3.0         15           2
 R arginine            5.3         26           3
 S serine              6.7         33           3
 T threonine           5.1         25           2
 V valine              7.7         38           2
 W tryptophan          1.0          5           1
 Y tyrosine            3.0         15           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   UDP-glucose dehydrogenase 
USP46                 0.007   ubiquitin specific peptidase 46 isoform 1 
USP12                 0.007   ubiquitin thiolesterase 12 
ZBTB1                 0.006   zinc finger and BTB domain containing 1 isoform 1 [...
ZBTB1                 0.006   zinc finger and BTB domain containing 1 isoform 2 [...
PIK3C2G               0.005   phosphoinositide-3-kinase, class 2 gamma polypeptid...
EIF4A1                0.005   eukaryotic translation initiation factor 4A isoform 1...
SGCE                  0.005   sarcoglycan, epsilon isoform 3 
ERI2                  0.005   exoribonuclease 2 isoform 1 
ERI2                  0.005   exoribonuclease 2 isoform 2 
TEX11                 0.004   testis expressed sequence 11 isoform 1 
SIGLEC6               0.004   sialic acid binding Ig-like lectin 6 isoform 2 prec...
ATPBD4                0.004   ATP binding domain 4 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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