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Search of human proteins with 18079321
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|18079321 V-set and transmembrane domain containing 2 like
[Homo sapiens]
(204 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|18079321 V-set and transmembrane domain containing 2 like [Ho... 425 e-119
gi|226437599 V-set and transmembrane domain containing 2B [Homo ... 125 2e-29
gi|239757226 PREDICTED: V-set and transmembrane domain containin... 125 2e-29
gi|239751732 PREDICTED: V-set and transmembrane domain containin... 125 2e-29
gi|239746233 PREDICTED: V-set and transmembrane domain containin... 125 2e-29
gi|148743776 V-set and transmembrane domain containing 2 [Homo s... 119 1e-27
gi|238624147 neuroplastin isoform c precursor [Homo sapiens] 59 2e-09
gi|6912646 neuroplastin isoform b precursor [Homo sapiens] 59 2e-09
gi|38372919 basigin isoform 1 precursor [Homo sapiens] 43 2e-04
gi|167857792 programmed cell death 1 precursor [Homo sapiens] 38 0.007
gi|99028881 V-set domain containing T cell activation inhibitor ... 37 0.012
gi|157694489 immunoglobulin superfamily, member 2 [Homo sapiens] 37 0.015
gi|169201757 PREDICTED: chromosome 10 open reading frame 134 [Ho... 36 0.026
gi|169201331 PREDICTED: chromosome 10 open reading frame 134 [Ho... 36 0.026
gi|239744207 PREDICTED: chromosome 10 open reading frame 134 [Ho... 36 0.026
gi|239787787 kin of IRRE like 3 isoform 2 [Homo sapiens] 35 0.034
gi|26006461 kin of IRRE like 3 isoform 1 [Homo sapiens] 35 0.034
gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens] 35 0.044
gi|67188443 CD276 antigen isoform a [Homo sapiens] 35 0.058
gi|13376852 CD276 antigen isoform b [Homo sapiens] 35 0.058
gi|55953133 immunoglobulin superfamily, member 3 isoform 1 [Homo... 35 0.058
gi|55953135 immunoglobulin superfamily, member 3 isoform 2 [Homo... 35 0.058
gi|22902134 CD8 antigen alpha polypeptide isoform 1 precursor [H... 34 0.075
gi|27886642 CD8 antigen alpha polypeptide isoform 2 precursor [H... 34 0.075
gi|225007536 CD8 antigen alpha polypeptide isoform 1 precursor [... 34 0.075
gi|16445029 immunoglobulin superfamily, member 8 [Homo sapiens] 34 0.075
gi|239753216 PREDICTED: similar to immunoglobulin superfamily, m... 34 0.098
gi|209529703 signal-regulatory protein beta 1 isoform 3 precurso... 34 0.098
gi|211904145 DAZ associated protein 2 isoform e [Homo sapiens] 33 0.13
gi|187761324 shootin1 isoform a [Homo sapiens] 33 0.13
>gi|18079321 V-set and transmembrane domain containing 2 like [Homo
sapiens]
Length = 204
Score = 425 bits (1092), Expect = e-119
Identities = 204/204 (100%), Positives = 204/204 (100%)
Query: 1 MGAPLAVALGALHYLALFLQLGGATRPAGHAPWDNHVSGHALFTETPHDMTARTGEDVEM 60
MGAPLAVALGALHYLALFLQLGGATRPAGHAPWDNHVSGHALFTETPHDMTARTGEDVEM
Sbjct: 1 MGAPLAVALGALHYLALFLQLGGATRPAGHAPWDNHVSGHALFTETPHDMTARTGEDVEM 60
Query: 61 ACSFRGSGSPSYSLEIQWWYVRSHRDWTDKQAWASNQLKASQQEDAGKEATKISVVKVVG 120
ACSFRGSGSPSYSLEIQWWYVRSHRDWTDKQAWASNQLKASQQEDAGKEATKISVVKVVG
Sbjct: 61 ACSFRGSGSPSYSLEIQWWYVRSHRDWTDKQAWASNQLKASQQEDAGKEATKISVVKVVG 120
Query: 121 SNISHKLRLSRVKPTDEGTYECRVIDFSDGKARHHKVKAYLRVQPGENSVLHLPEAPPAA 180
SNISHKLRLSRVKPTDEGTYECRVIDFSDGKARHHKVKAYLRVQPGENSVLHLPEAPPAA
Sbjct: 121 SNISHKLRLSRVKPTDEGTYECRVIDFSDGKARHHKVKAYLRVQPGENSVLHLPEAPPAA 180
Query: 181 PAPPPPKPGKELRKRSVDQEACSL 204
PAPPPPKPGKELRKRSVDQEACSL
Sbjct: 181 PAPPPPKPGKELRKRSVDQEACSL 204
>gi|226437599 V-set and transmembrane domain containing 2B [Homo
sapiens]
Length = 285
Score = 125 bits (314), Expect = 2e-29
Identities = 63/124 (50%), Positives = 86/124 (69%), Gaps = 4/124 (3%)
Query: 41 ALFTETPHDMTARTGEDVEMACSFRGSGSPSYSLEIQWWYVRSH-RDWTDKQAWASNQLK 99
A FTE P D+T R G+D+EM C+FR SG+ SYSLEIQWWY++ R+ + A + +
Sbjct: 28 AAFTEVPKDVTVREGDDIEMPCAFRASGATSYSLEIQWWYLKEPPRELLHELALS---VP 84
Query: 100 ASQQEDAGKEATKISVVKVVGSNISHKLRLSRVKPTDEGTYECRVIDFSDGKARHHKVKA 159
++ + K+ATKIS V+V G++ISH+LRLS V+ DEG YECRV D+SD + HK +A
Sbjct: 85 GARSKVTNKDATKISTVRVQGNDISHRLRLSAVRLQDEGVYECRVSDYSDDDTQEHKAQA 144
Query: 160 YLRV 163
LRV
Sbjct: 145 MLRV 148
>gi|239757226 PREDICTED: V-set and transmembrane domain containing
2B [Homo sapiens]
Length = 285
Score = 125 bits (314), Expect = 2e-29
Identities = 63/124 (50%), Positives = 86/124 (69%), Gaps = 4/124 (3%)
Query: 41 ALFTETPHDMTARTGEDVEMACSFRGSGSPSYSLEIQWWYVRSH-RDWTDKQAWASNQLK 99
A FTE P D+T R G+D+EM C+FR SG+ SYSLEIQWWY++ R+ + A + +
Sbjct: 28 AAFTEVPKDVTVREGDDIEMPCAFRASGATSYSLEIQWWYLKEPPRELLHELALS---VP 84
Query: 100 ASQQEDAGKEATKISVVKVVGSNISHKLRLSRVKPTDEGTYECRVIDFSDGKARHHKVKA 159
++ + K+ATKIS V+V G++ISH+LRLS V+ DEG YECRV D+SD + HK +A
Sbjct: 85 GARSKVTNKDATKISTVRVQGNDISHRLRLSAVRLQDEGVYECRVSDYSDDDTQEHKAQA 144
Query: 160 YLRV 163
LRV
Sbjct: 145 MLRV 148
>gi|239751732 PREDICTED: V-set and transmembrane domain containing
2B [Homo sapiens]
Length = 285
Score = 125 bits (314), Expect = 2e-29
Identities = 63/124 (50%), Positives = 86/124 (69%), Gaps = 4/124 (3%)
Query: 41 ALFTETPHDMTARTGEDVEMACSFRGSGSPSYSLEIQWWYVRSH-RDWTDKQAWASNQLK 99
A FTE P D+T R G+D+EM C+FR SG+ SYSLEIQWWY++ R+ + A + +
Sbjct: 28 AAFTEVPKDVTVREGDDIEMPCAFRASGATSYSLEIQWWYLKEPPRELLHELALS---VP 84
Query: 100 ASQQEDAGKEATKISVVKVVGSNISHKLRLSRVKPTDEGTYECRVIDFSDGKARHHKVKA 159
++ + K+ATKIS V+V G++ISH+LRLS V+ DEG YECRV D+SD + HK +A
Sbjct: 85 GARSKVTNKDATKISTVRVQGNDISHRLRLSAVRLQDEGVYECRVSDYSDDDTQEHKAQA 144
Query: 160 YLRV 163
LRV
Sbjct: 145 MLRV 148
>gi|239746233 PREDICTED: V-set and transmembrane domain containing
2B [Homo sapiens]
Length = 285
Score = 125 bits (314), Expect = 2e-29
Identities = 63/124 (50%), Positives = 86/124 (69%), Gaps = 4/124 (3%)
Query: 41 ALFTETPHDMTARTGEDVEMACSFRGSGSPSYSLEIQWWYVRSH-RDWTDKQAWASNQLK 99
A FTE P D+T R G+D+EM C+FR SG+ SYSLEIQWWY++ R+ + A + +
Sbjct: 28 AAFTEVPKDVTVREGDDIEMPCAFRASGATSYSLEIQWWYLKEPPRELLHELALS---VP 84
Query: 100 ASQQEDAGKEATKISVVKVVGSNISHKLRLSRVKPTDEGTYECRVIDFSDGKARHHKVKA 159
++ + K+ATKIS V+V G++ISH+LRLS V+ DEG YECRV D+SD + HK +A
Sbjct: 85 GARSKVTNKDATKISTVRVQGNDISHRLRLSAVRLQDEGVYECRVSDYSDDDTQEHKAQA 144
Query: 160 YLRV 163
LRV
Sbjct: 145 MLRV 148
>gi|148743776 V-set and transmembrane domain containing 2 [Homo
sapiens]
Length = 236
Score = 119 bits (299), Expect = 1e-27
Identities = 60/133 (45%), Positives = 86/133 (64%), Gaps = 1/133 (0%)
Query: 37 VSGHALFTETPHDMTARTGEDVEMACSFRGSGSPSYSLEIQWWYVRSHRDWTDKQAWASN 96
+S A FTE P ++TA G++VEM+C+F+ SGS S LEIQWW++R D A
Sbjct: 23 LSSQAKFTEFPRNVTATEGQNVEMSCAFQ-SGSASVYLEIQWWFLRGPEDLDPGAEGAGA 81
Query: 97 QLKASQQEDAGKEATKISVVKVVGSNISHKLRLSRVKPTDEGTYECRVIDFSDGKARHHK 156
Q++ D + TKIS VKV G++ISHKL++S+V+ DEG YECRV D + G+ + HK
Sbjct: 82 QVELLPDRDPDSDGTKISTVKVQGNDISHKLQISKVRKKDEGLYECRVTDANYGELQEHK 141
Query: 157 VKAYLRVQPGENS 169
+AYL+V ++
Sbjct: 142 AQAYLKVNANSHA 154
>gi|238624147 neuroplastin isoform c precursor [Homo sapiens]
Length = 394
Score = 59.3 bits (142), Expect = 2e-09
Identities = 44/140 (31%), Positives = 60/140 (42%), Gaps = 29/140 (20%)
Query: 4 PLAVALGALHYLALFLQLGGATRPAGHAPWDNHVSGHALFTETPHDMTARTGEDVEMACS 63
P A+AL L L GA + AG F ++P T TG+ E+ C
Sbjct: 7 PSALALSLLLVSGSLLPGPGAAQNAG-------------FVKSPMSETKLTGDAFELYCD 53
Query: 64 FRGSGSPSYSLEIQWWYVRSHRDWTDKQAWASNQLKASQQEDAGKEATKISVVKVVGSNI 123
GS +P EIQWWY +R + +Q W G +++V GSN
Sbjct: 54 VVGSPTP----EIQWWYAEVNRAESFRQLWD------------GARKRRVTVNTAYGSNG 97
Query: 124 SHKLRLSRVKPTDEGTYECR 143
LR++R+ D GTYECR
Sbjct: 98 VSVLRITRLTLEDSGTYECR 117
>gi|6912646 neuroplastin isoform b precursor [Homo sapiens]
Length = 398
Score = 59.3 bits (142), Expect = 2e-09
Identities = 44/140 (31%), Positives = 60/140 (42%), Gaps = 29/140 (20%)
Query: 4 PLAVALGALHYLALFLQLGGATRPAGHAPWDNHVSGHALFTETPHDMTARTGEDVEMACS 63
P A+AL L L GA + AG F ++P T TG+ E+ C
Sbjct: 7 PSALALSLLLVSGSLLPGPGAAQNAG-------------FVKSPMSETKLTGDAFELYCD 53
Query: 64 FRGSGSPSYSLEIQWWYVRSHRDWTDKQAWASNQLKASQQEDAGKEATKISVVKVVGSNI 123
GS +P EIQWWY +R + +Q W G +++V GSN
Sbjct: 54 VVGSPTP----EIQWWYAEVNRAESFRQLWD------------GARKRRVTVNTAYGSNG 97
Query: 124 SHKLRLSRVKPTDEGTYECR 143
LR++R+ D GTYECR
Sbjct: 98 VSVLRITRLTLEDSGTYECR 117
>gi|38372919 basigin isoform 1 precursor [Homo sapiens]
Length = 385
Score = 43.1 bits (100), Expect = 2e-04
Identities = 39/144 (27%), Positives = 55/144 (38%), Gaps = 25/144 (17%)
Query: 16 ALFLQLGGATRPAGHAPWDNHVSGHALFTETPHDMTARTGEDVEMACSFRGSGSPSYSLE 75
ALF+ LG A A SG A F + P G VE+ C GS P E
Sbjct: 4 ALFVLLGFALLGTHGA------SGAAGFVQAPLSQQRWVGGSVELHCEAVGSPVP----E 53
Query: 76 IQWWYVRSHRDWTDKQAWASNQLKASQQEDAGKEATKISVVKVVGSNISHKLRLSRVKPT 135
IQWW+ + T Q W G ++ + + + + + +
Sbjct: 54 IQWWFEGQGPNDTCSQLW------------DGARLDRVHIHATYHQHAASTISIDTLVEE 101
Query: 136 DEGTYECRVIDFSDGKARHHKVKA 159
D GTYECR S+ R+H +A
Sbjct: 102 DTGTYECRA---SNDPDRNHLTRA 122
>gi|167857792 programmed cell death 1 precursor [Homo sapiens]
Length = 288
Score = 37.7 bits (86), Expect = 0.007
Identities = 37/147 (25%), Positives = 59/147 (40%), Gaps = 17/147 (11%)
Query: 44 TETPHDMTARTGEDVEMACSFRGSGSPSYSLEIQWWYVRSHRDWTDKQAWASNQLKASQQ 103
T +P + G++ CSF + S S+ L WY S + TDK A A + ++
Sbjct: 36 TFSPALLVVTEGDNATFTCSFSNT-SESFVLN---WYRMSPSNQTDKLA-AFPEDRSQPG 90
Query: 104 EDAGKEATKISVVKVVGSNISHKLRLSRVKPTDEGTYECRVIDFSDGKARHHKVKAYLRV 163
+D T++ + + + R + D GTY C I + ++A LRV
Sbjct: 91 QDCRFRVTQLP------NGRDFHMSVVRARRNDSGTYLCGAISLAPKAQIKESLRAELRV 144
Query: 164 QPGENSVLHLPEAPPAAPAPPPPKPGK 190
E P A P+P P G+
Sbjct: 145 TE------RRAEVPTAHPSPSPRPAGQ 165
>gi|99028881 V-set domain containing T cell activation inhibitor 1
[Homo sapiens]
Length = 282
Score = 37.0 bits (84), Expect = 0.012
Identities = 35/121 (28%), Positives = 53/121 (43%), Gaps = 19/121 (15%)
Query: 37 VSGHALFTETPHDMTARTGEDVEMACSFRGSGSPSYSLEIQWW------YVRSHRDWTDK 90
+SG T T GED ++C+F S + IQW V ++ D+
Sbjct: 31 ISGRHSITVTTVASAGNIGEDGILSCTFEPDIKLS-DIVIQWLKEGVLGLVHEFKEGKDE 89
Query: 91 QAWASNQLKASQQEDAGKEATKISVVKVVGSNISHKLRLSRVKPTDEGTYECRVIDFSDG 150
S+Q++ + T + +V+ N S LRL V+ TD GTY+C +I S G
Sbjct: 90 ---------LSEQDEMFRGRTAVFADQVIVGNAS--LRLKNVQLTDAGTYKCYIIT-SKG 137
Query: 151 K 151
K
Sbjct: 138 K 138
>gi|157694489 immunoglobulin superfamily, member 2 [Homo sapiens]
Length = 1021
Score = 36.6 bits (83), Expect = 0.015
Identities = 31/105 (29%), Positives = 47/105 (44%), Gaps = 15/105 (14%)
Query: 55 GEDVEMACSFRGSGSPSYSLEIQWWYVRSHRDWTDKQAWASN------QLKASQQEDAGK 108
GE + C G+ SP L + WW++ RD T + A QL AS +
Sbjct: 427 GETLAFLCKAGGAESP---LSVSWWHIP--RDQTQPEFVAGMGQDGIVQLGASYGVPSYH 481
Query: 109 EATKISVVKVVGSNISHKLRLSRVKPTDEGTYECRVIDFSDGKAR 153
T++ + + +L ++ TD GTYECRV + S +AR
Sbjct: 482 GNTRLEKMDWA----TFQLEITFTAITDSGTYECRVSEKSRNQAR 522
Score = 30.4 bits (67), Expect = 1.1
Identities = 22/95 (23%), Positives = 41/95 (43%), Gaps = 13/95 (13%)
Query: 57 DVEMACSFRGSGSPSYSLEIQWWYVRSHRDWTDKQAWASNQLKASQQEDA----GKEATK 112
+V + CS GS + + W++ R + + ++L Q D G+E +
Sbjct: 829 EVAIRCSLESVGSSATLYSVMWYWNREN---------SGSKLLVHLQHDGLLEYGEEGLR 879
Query: 113 ISVVKVVGSNISHKLRLSRVKPTDEGTYECRVIDF 147
+ S+ L+L +V+ D G Y CRV ++
Sbjct: 880 RHLHCYRSSSTDFVLKLHQVEMEDAGMYWCRVAEW 914
>gi|169201757 PREDICTED: chromosome 10 open reading frame 134 [Homo
sapiens]
Length = 626
Score = 35.8 bits (81), Expect = 0.026
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 101 SQQEDAGKEATKISVVKVVGSNISHKLRLSRVKPTDEGTYECRVIDFSDGKARHHKVKAY 160
++ E+A + + + V+ V S I+H+L+ + P+D+ + + F K + K +
Sbjct: 121 AKAEEAERASAVSTAVQWVNSTITHELQ--GMAPSDQAEVDHLLRIFFASKVQEDKGRKE 178
Query: 161 LRVQPGENSVLHLPEAPPAAPAPPPPKPGKE 191
L + E S + P PP P PPPP P K+
Sbjct: 179 LE-KSLEYSTVPTP-LPPVPPPPPPPPPTKK 207
>gi|169201331 PREDICTED: chromosome 10 open reading frame 134 [Homo
sapiens]
Length = 626
Score = 35.8 bits (81), Expect = 0.026
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 101 SQQEDAGKEATKISVVKVVGSNISHKLRLSRVKPTDEGTYECRVIDFSDGKARHHKVKAY 160
++ E+A + + + V+ V S I+H+L+ + P+D+ + + F K + K +
Sbjct: 121 AKAEEAERASAVSTAVQWVNSTITHELQ--GMAPSDQAEVDHLLRIFFASKVQEDKGRKE 178
Query: 161 LRVQPGENSVLHLPEAPPAAPAPPPPKPGKE 191
L + E S + P PP P PPPP P K+
Sbjct: 179 LE-KSLEYSTVPTP-LPPVPPPPPPPPPTKK 207
>gi|239744207 PREDICTED: chromosome 10 open reading frame 134 [Homo
sapiens]
Length = 626
Score = 35.8 bits (81), Expect = 0.026
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 101 SQQEDAGKEATKISVVKVVGSNISHKLRLSRVKPTDEGTYECRVIDFSDGKARHHKVKAY 160
++ E+A + + + V+ V S I+H+L+ + P+D+ + + F K + K +
Sbjct: 121 AKAEEAERASAVSTAVQWVNSTITHELQ--GMAPSDQAEVDHLLRIFFASKVQEDKGRKE 178
Query: 161 LRVQPGENSVLHLPEAPPAAPAPPPPKPGKE 191
L + E S + P PP P PPPP P K+
Sbjct: 179 LE-KSLEYSTVPTP-LPPVPPPPPPPPPTKK 207
>gi|239787787 kin of IRRE like 3 isoform 2 [Homo sapiens]
Length = 600
Score = 35.4 bits (80), Expect = 0.034
Identities = 31/143 (21%), Positives = 55/143 (38%), Gaps = 38/143 (26%)
Query: 43 FTETPHDMTARTGEDVEMACSFRGSGSPSYSLEIQWWYVRSHRDWTDKQAWASNQLKASQ 102
F++ P D +G+ V + C+ P Y + W +K
Sbjct: 50 FSQQPQDQVVVSGQPVTLLCAI-----PEYDGFVLW-------------------IKDGL 85
Query: 103 QEDAGKEATKISVVKVVGSNIS--HKLRLSRVKPTDEGTYECRVIDFSDGKARHHKVKAY 160
G++ + VVG+++S H L++ R + D+ YEC+ I +A
Sbjct: 86 ALGVGRDLSSYPQYLVVGNHLSGEHHLKILRAELQDDAVYECQAI------------QAA 133
Query: 161 LRVQPGENSVLHLPEAPPAAPAP 183
+R +P +VL P+ P P
Sbjct: 134 IRSRPARLTVLVPPDDPVILGGP 156
>gi|26006461 kin of IRRE like 3 isoform 1 [Homo sapiens]
Length = 778
Score = 35.4 bits (80), Expect = 0.034
Identities = 31/143 (21%), Positives = 55/143 (38%), Gaps = 38/143 (26%)
Query: 43 FTETPHDMTARTGEDVEMACSFRGSGSPSYSLEIQWWYVRSHRDWTDKQAWASNQLKASQ 102
F++ P D +G+ V + C+ P Y + W +K
Sbjct: 50 FSQQPQDQVVVSGQPVTLLCAI-----PEYDGFVLW-------------------IKDGL 85
Query: 103 QEDAGKEATKISVVKVVGSNIS--HKLRLSRVKPTDEGTYECRVIDFSDGKARHHKVKAY 160
G++ + VVG+++S H L++ R + D+ YEC+ I +A
Sbjct: 86 ALGVGRDLSSYPQYLVVGNHLSGEHHLKILRAELQDDAVYECQAI------------QAA 133
Query: 161 LRVQPGENSVLHLPEAPPAAPAP 183
+R +P +VL P+ P P
Sbjct: 134 IRSRPARLTVLVPPDDPVILGGP 156
>gi|126012571 heparan sulfate proteoglycan 2 [Homo sapiens]
Length = 4391
Score = 35.0 bits (79), Expect = 0.044
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 10/98 (10%)
Query: 107 GKEATKISVVKVVGSNISH------KLRLSRVKPTDEGTYECRVIDFSDGKARHHKVKAY 160
G+ +++ K GS SH +LRL V P D G Y CRV+ G + +
Sbjct: 2752 GQAHAQVTWHKRGGSLPSHHQTRGSRLRLHHVSPADSGEYVCRVM----GSSGPLEASVL 2807
Query: 161 LRVQPGENSVLHLPEAPPAAPAPPPPKPGKELRKRSVD 198
+ ++ +S +H+P A P P + +++D
Sbjct: 2808 VTIEASGSSAVHVPAPGGAPPIRIEPSSSRVAEGQTLD 2845
Score = 34.3 bits (77), Expect = 0.075
Identities = 46/176 (26%), Positives = 60/176 (34%), Gaps = 44/176 (25%)
Query: 24 ATRPAGHAPWDN--HVSGHALFTETPHDMTARTGEDVEMACSFRGSGSPSYSLEIQWWYV 81
AT PAGHA HV T P + + GE V++ C G+ L QW V
Sbjct: 3280 ATSPAGHAEATIILHVESPPYATTVPEHASVQAGETVQLQCLAHGTP----PLTFQWSRV 3335
Query: 82 RSHRDWTDKQAWASNQLKASQQEDAGKEATKISVVKVVGSNISHKLRLSRVKPTDEGTYE 141
S +A A N+L L R P D G Y
Sbjct: 3336 GSS---LPGRATARNEL----------------------------LHFERAAPEDSGRYR 3364
Query: 142 CRVIDFSDGKARHHKVKAYLRVQPGENSVLHLPEAPPAAPAPPPPKPGKELRKRSV 197
CRV + K + A L VQ S LP A + P + +L +S+
Sbjct: 3365 CRVTN----KVGSAEAFAQLLVQGPPGS---LPATSIPAGSTPTVQVTPQLETKSI 3413
Score = 31.2 bits (69), Expect = 0.64
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 6/54 (11%)
Query: 124 SHKLRLSRVKPTDEGTYECRVIDFSDGKARHHKVKAYLRVQPGENSVLHLPEAP 177
++ L L V+P D GTY C + R KVKA+ +Q E V + + P
Sbjct: 3623 NNMLMLPSVRPQDAGTYVCTATN------RQGKVKAFAHLQVPERVVPYFTQTP 3670
Score = 29.6 bits (65), Expect = 1.9
Identities = 22/64 (34%), Positives = 28/64 (43%), Gaps = 12/64 (18%)
Query: 126 KLRLSRVKPTDEGTYECRVIDFSDGKARHHKVKAYLRVQPGENSVLHLPEAPPA-APAPP 184
+LRL +V P D G Y CRV + S K V SVLH + P+ P P
Sbjct: 2101 RLRLPQVSPADSGEYVCRVENGSGPKEASITV-----------SVLHGTHSGPSYTPVPG 2149
Query: 185 PPKP 188
+P
Sbjct: 2150 STRP 2153
Score = 29.3 bits (64), Expect = 2.4
Identities = 31/120 (25%), Positives = 41/120 (34%), Gaps = 38/120 (31%)
Query: 47 PHDMTARTGEDVEMACSFRGSGSPSYSLEIQWWYVRSHRDWTDKQAWASNQLKASQQEDA 106
P +T + G+ E CS GS +P+ +WT QL A Q
Sbjct: 1872 PPQLTVQPGQLAEFRCSATGSPTPTL-------------EWT---GGPGGQLPAKAQIHG 1915
Query: 107 GKEATKISVVKVVGSNISHKLRLSRVKPTDEGTYECRVIDFSDGKARHHKVKAYLRVQPG 166
G LRL V+PTD+ Y CR + A +A L V G
Sbjct: 1916 GI------------------LRLPAVEPTDQAQYLCR----AHSSAGQQVARAVLHVHGG 1953
Score = 28.5 bits (62), Expect = 4.1
Identities = 12/23 (52%), Positives = 15/23 (65%)
Query: 126 KLRLSRVKPTDEGTYECRVIDFS 148
+LRL +V P D G Y CRV+ S
Sbjct: 2487 RLRLLQVTPADSGEYVCRVVGSS 2509
Score = 28.5 bits (62), Expect = 4.1
Identities = 19/59 (32%), Positives = 25/59 (42%), Gaps = 4/59 (6%)
Query: 126 KLRLSRVKPTDEGTYECRVIDFSDGKARHHKVKAYLRVQPGENSVLHLPEAPPAAPAPP 184
+LRL V P D G Y CR + G + + V P E S L +P + PP
Sbjct: 2975 QLRLHLVSPADSGEYVCRA---ASGPGPEQEASFTVTVPPSEGSSYRL-RSPVISIDPP 3029
Score = 27.7 bits (60), Expect = 7.1
Identities = 22/60 (36%), Positives = 24/60 (40%), Gaps = 16/60 (26%)
Query: 127 LRLSRVKPTDEGTYECRVIDFSDGKARHHKVKAYLRVQPGENSVLHLPEAPPAAPAPPPP 186
LRL +V P D G Y C V+ S P E SVL EA P P PP
Sbjct: 2203 LRLHQVTPADSGEYVCHVVGTSG---------------PLEASVLVTIEA-SVIPGPIPP 2246
>gi|67188443 CD276 antigen isoform a [Homo sapiens]
Length = 534
Score = 34.7 bits (78), Expect = 0.058
Identities = 40/166 (24%), Positives = 64/166 (38%), Gaps = 30/166 (18%)
Query: 41 ALFTETPHD-MTARTGEDVEMACSFRGSGSPSYSLEIQWWYVRSHRDW--TDKQAWASNQ 97
AL + P D + A G D + CSF S P +SL + + W TD + +
Sbjct: 28 ALEVQVPEDPVVALVGTDATLCCSF--SPEPGFSL------AQLNLIWQLTDTKQLVHSF 79
Query: 98 LKASQQEDAGKEATKISVVKVVGSNISHKLRLSRVKPTDEGTYECRVIDFSDGKARHHKV 157
+ Q A T + + N S LRL RV+ DEG++ C
Sbjct: 80 AEGQDQGSAYANRTALFPDLLAQGNAS--LRLQRVRVADEGSFTC--------------- 122
Query: 158 KAYLRVQPGENSVLHLPEAPPAAPAPPPPKPGKELRKRSVDQEACS 203
++ ++ ++ + L A P + +P K+LR CS
Sbjct: 123 --FVSIRDFGSAAVSLQVAAPYSKPSMTLEPNKDLRPGDTVTITCS 166
Score = 32.7 bits (73), Expect = 0.22
Identities = 39/166 (23%), Positives = 64/166 (38%), Gaps = 30/166 (18%)
Query: 41 ALFTETPHD-MTARTGEDVEMACSFRGSGSPSYSLEIQWWYVRSHRDW--TDKQAWASNQ 97
A+ + P D + A G D + CSF S P +SL + + W TD + +
Sbjct: 246 AVEVQVPEDPVVALVGTDATLRCSF--SPEPGFSL------AQLNLIWQLTDTKQLVHSF 297
Query: 98 LKASQQEDAGKEATKISVVKVVGSNISHKLRLSRVKPTDEGTYECRVIDFSDGKARHHKV 157
+ Q A T + + N S LRL RV+ DEG++ C
Sbjct: 298 TEGRDQGSAYANRTALFPDLLAQGNAS--LRLQRVRVADEGSFTC--------------- 340
Query: 158 KAYLRVQPGENSVLHLPEAPPAAPAPPPPKPGKELRKRSVDQEACS 203
++ ++ ++ + L A P + +P K+LR CS
Sbjct: 341 --FVSIRDFGSAAVSLQVAAPYSKPSMTLEPNKDLRPGDTVTITCS 384
>gi|13376852 CD276 antigen isoform b [Homo sapiens]
Length = 316
Score = 34.7 bits (78), Expect = 0.058
Identities = 40/166 (24%), Positives = 64/166 (38%), Gaps = 30/166 (18%)
Query: 41 ALFTETPHD-MTARTGEDVEMACSFRGSGSPSYSLEIQWWYVRSHRDW--TDKQAWASNQ 97
AL + P D + A G D + CSF S P +SL + + W TD + +
Sbjct: 28 ALEVQVPEDPVVALVGTDATLCCSF--SPEPGFSL------AQLNLIWQLTDTKQLVHSF 79
Query: 98 LKASQQEDAGKEATKISVVKVVGSNISHKLRLSRVKPTDEGTYECRVIDFSDGKARHHKV 157
+ Q A T + + N S LRL RV+ DEG++ C
Sbjct: 80 AEGQDQGSAYANRTALFPDLLAQGNAS--LRLQRVRVADEGSFTC--------------- 122
Query: 158 KAYLRVQPGENSVLHLPEAPPAAPAPPPPKPGKELRKRSVDQEACS 203
++ ++ ++ + L A P + +P K+LR CS
Sbjct: 123 --FVSIRDFGSAAVSLQVAAPYSKPSMTLEPNKDLRPGDTVTITCS 166
>gi|55953133 immunoglobulin superfamily, member 3 isoform 1 [Homo
sapiens]
Length = 1214
Score = 34.7 bits (78), Expect = 0.058
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 11/98 (11%)
Query: 55 GEDVEMACSFRGSGSPSYSLEIQWWYV-----RSHRDWTDKQAWASNQLKASQQEDAGKE 109
GED+ +CS R +G P + W V RS+ W D+ + Q +S E +
Sbjct: 445 GEDLRFSCSVRTAGRPQGRFSVIWQLVDRQNRRSNIMWLDRD--GTVQPGSSYWERSSFG 502
Query: 110 ATKISVVKVVGSNISHKLRLSRVKPTDEGTYECRVIDF 147
++ V+ S L + + DEG YEC V ++
Sbjct: 503 GVQMEQVQ----PNSFSLGIFNSRKEDEGQYECHVTEW 536
Score = 27.3 bits (59), Expect = 9.2
Identities = 29/130 (22%), Positives = 50/130 (38%), Gaps = 16/130 (12%)
Query: 55 GEDVEMACSFRGSGSPSYSLEIQWWYVRSHRDWTDKQAWASNQLKASQQEDAGKEAT-KI 113
GE VE C P + W + S N + E A +EA ++
Sbjct: 295 GEPVEFRCILEAQNVPDRYFAVSWAFNSSLI-----ATMGPNAVPVLNSEFAHREARGQL 349
Query: 114 SVVKVVGSNISHKLRLSRVKPTDEGTYECRVI--------DFSDGKARHHKVKAYLRVQP 165
V K S+ L++ ++ D G Y CRV +F D +++ K + +
Sbjct: 350 KVAKE--SDSVFVLKIYHLRQEDSGKYNCRVTEREKTVTGEFIDKESKRPKNIPIIVLPL 407
Query: 166 GENSVLHLPE 175
+N V+ +P+
Sbjct: 408 TDNWVVKVPQ 417
>gi|55953135 immunoglobulin superfamily, member 3 isoform 2 [Homo
sapiens]
Length = 1194
Score = 34.7 bits (78), Expect = 0.058
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 11/98 (11%)
Query: 55 GEDVEMACSFRGSGSPSYSLEIQWWYV-----RSHRDWTDKQAWASNQLKASQQEDAGKE 109
GED+ +CS R +G P + W V RS+ W D+ + Q +S E +
Sbjct: 425 GEDLRFSCSVRTAGRPQGRFSVIWQLVDRQNRRSNIMWLDRD--GTVQPGSSYWERSSFG 482
Query: 110 ATKISVVKVVGSNISHKLRLSRVKPTDEGTYECRVIDF 147
++ V+ S L + + DEG YEC V ++
Sbjct: 483 GVQMEQVQ----PNSFSLGIFNSRKEDEGQYECHVTEW 516
>gi|22902134 CD8 antigen alpha polypeptide isoform 1 precursor [Homo
sapiens]
Length = 235
Score = 34.3 bits (77), Expect = 0.075
Identities = 41/171 (23%), Positives = 61/171 (35%), Gaps = 27/171 (15%)
Query: 36 HVSGHALFTETPHDMTARTGEDVEMACSFRGSGSPSYSLEIQWWYVRSHRDWTDKQAWAS 95
H + + F +P D T GE VE+ C S S W + + A AS
Sbjct: 17 HAARPSQFRVSPLDRTWNLGETVELKCQVLLSNPTS---GCSWLF-------QPRGAAAS 66
Query: 96 NQLKASQQEDAGKEATKISVVKVVGSNISHK--LRLSRVKPTDEGTYECRVIDFSDGKAR 153
++ K A + + G + L LS + +EG Y C + S
Sbjct: 67 PTFLLYLSQNKPKAAEGLDTQRFSGKRLGDTFVLTLSDFRRENEGYYFCSALSNS----- 121
Query: 154 HHKVKAYLRVQPGENSVLHLPEAPPAAPAPPPPKPGKELRKR--SVDQEAC 202
+ + P + LP P PAP PP P + + S+ EAC
Sbjct: 122 ---IMYFSHFVP-----VFLPAKPTTTPAPRPPTPAPTIASQPLSLRPEAC 164
>gi|27886642 CD8 antigen alpha polypeptide isoform 2 precursor [Homo
sapiens]
Length = 198
Score = 34.3 bits (77), Expect = 0.075
Identities = 41/171 (23%), Positives = 61/171 (35%), Gaps = 27/171 (15%)
Query: 36 HVSGHALFTETPHDMTARTGEDVEMACSFRGSGSPSYSLEIQWWYVRSHRDWTDKQAWAS 95
H + + F +P D T GE VE+ C S S W + + A AS
Sbjct: 17 HAARPSQFRVSPLDRTWNLGETVELKCQVLLSNPTS---GCSWLF-------QPRGAAAS 66
Query: 96 NQLKASQQEDAGKEATKISVVKVVGSNISHK--LRLSRVKPTDEGTYECRVIDFSDGKAR 153
++ K A + + G + L LS + +EG Y C + S
Sbjct: 67 PTFLLYLSQNKPKAAEGLDTQRFSGKRLGDTFVLTLSDFRRENEGYYFCSALSNS----- 121
Query: 154 HHKVKAYLRVQPGENSVLHLPEAPPAAPAPPPPKPGKELRKR--SVDQEAC 202
+ + P + LP P PAP PP P + + S+ EAC
Sbjct: 122 ---IMYFSHFVP-----VFLPAKPTTTPAPRPPTPAPTIASQPLSLRPEAC 164
>gi|225007536 CD8 antigen alpha polypeptide isoform 1 precursor
[Homo sapiens]
Length = 235
Score = 34.3 bits (77), Expect = 0.075
Identities = 41/171 (23%), Positives = 61/171 (35%), Gaps = 27/171 (15%)
Query: 36 HVSGHALFTETPHDMTARTGEDVEMACSFRGSGSPSYSLEIQWWYVRSHRDWTDKQAWAS 95
H + + F +P D T GE VE+ C S S W + + A AS
Sbjct: 17 HAARPSQFRVSPLDRTWNLGETVELKCQVLLSNPTS---GCSWLF-------QPRGAAAS 66
Query: 96 NQLKASQQEDAGKEATKISVVKVVGSNISHK--LRLSRVKPTDEGTYECRVIDFSDGKAR 153
++ K A + + G + L LS + +EG Y C + S
Sbjct: 67 PTFLLYLSQNKPKAAEGLDTQRFSGKRLGDTFVLTLSDFRRENEGYYFCSALSNS----- 121
Query: 154 HHKVKAYLRVQPGENSVLHLPEAPPAAPAPPPPKPGKELRKR--SVDQEAC 202
+ + P + LP P PAP PP P + + S+ EAC
Sbjct: 122 ---IMYFSHFVP-----VFLPAKPTTTPAPRPPTPAPTIASQPLSLRPEAC 164
>gi|16445029 immunoglobulin superfamily, member 8 [Homo sapiens]
Length = 613
Score = 34.3 bits (77), Expect = 0.075
Identities = 32/100 (32%), Positives = 41/100 (41%), Gaps = 14/100 (14%)
Query: 51 TARTGEDVEMAC--SFRGSGSPSYSLEIQWWYVRSHRDWTDKQAWASNQLKASQQEDAGK 108
T GE + C S RG G P L WW R + + QL +D
Sbjct: 451 TVYRGETASLLCNISVRG-GPPGLRLAASWWVERPE---DGELSSVPAQLVGGVGQDGVA 506
Query: 109 E------ATKISVVKVVGSNISHKLRLSRVKPTDEGTYEC 142
E +SV ++VG SH+LRL + P DEG Y C
Sbjct: 507 ELGVRPGGGPVSV-ELVGPR-SHRLRLHSLGPEDEGVYHC 544
Score = 33.1 bits (74), Expect = 0.17
Identities = 33/137 (24%), Positives = 55/137 (40%), Gaps = 12/137 (8%)
Query: 55 GEDVEMACSFRGSGSPSYSLEIQWWYVRSHRDWTDKQAWASNQLKASQQEDAGKE-ATKI 113
G V ++C+ G P+ +W+ R T ++ + S + A ++
Sbjct: 42 GTAVSISCNVTGYEGPAQQ-NFEWFLYRPEAPDTALGIVSTKDTQFSYAVFKSRVVAGEV 100
Query: 114 SVVKVVGSNISHKLRLSRVKPTDEGTYECRVIDFSDGKARHHKVKAYLRVQPGENSVLHL 173
V ++ G + L+++R++ D G YEC + K LRV P VL +
Sbjct: 101 QVQRLQGDAVV--LKIARLQAQDAGIYECHTPSTDTRYLGSYSGKVELRVLP---DVLQV 155
Query: 174 PEAPPA-----APAPPP 185
APP AP PP
Sbjct: 156 SAAPPGPRGRQAPTSPP 172
Score = 32.0 bits (71), Expect = 0.37
Identities = 32/137 (23%), Positives = 50/137 (36%), Gaps = 16/137 (11%)
Query: 37 VSGHALFTETPHDMTARTGEDVEMACSFRGSGSPSYSLEIQWWYVRSHRDWTDKQAWASN 96
+S T P + GE +E+ C+ G+ P+ + W A A
Sbjct: 301 LSSQLAVTVGPGERRIGPGEPLELLCNVSGALPPAGR------HAAYSVGWEMAPAGAPG 354
Query: 97 QLKASQQEDA--------GKEATKISVVKVVGSNISHKLRLSRVKPTDEGTYECRVIDFS 148
+ Q D G E I++ KV +++LRL +P D GTY C +
Sbjct: 355 PGRLVAQLDTEGVGSLGPGYEGRHIAMEKVASR--TYRLRLEAARPGDAGTYRCLAKAYV 412
Query: 149 DGKARHHKVKAYLRVQP 165
G + A R +P
Sbjct: 413 RGSGTRLREAASARSRP 429
>gi|239753216 PREDICTED: similar to immunoglobulin superfamily,
member 3 [Homo sapiens]
Length = 376
Score = 33.9 bits (76), Expect = 0.098
Identities = 27/98 (27%), Positives = 43/98 (43%), Gaps = 11/98 (11%)
Query: 55 GEDVEMACSFRGSGSPSYSLEIQWWYV-----RSHRDWTDKQAWASNQLKASQQEDAGKE 109
GED+ +CS R +G P + W V RS W D+ + Q +S E +
Sbjct: 258 GEDLRFSCSVRMAGRPQGRFSVIWQLVDRQNRRSDIMWLDRD--GTVQPGSSYWERSSFG 315
Query: 110 ATKISVVKVVGSNISHKLRLSRVKPTDEGTYECRVIDF 147
+ ++ V+ S L + + DEG YEC V ++
Sbjct: 316 SVQMEQVQ----PNSFSLGIFNSRKEDEGQYECHVTEW 349
Score = 27.7 bits (60), Expect = 7.1
Identities = 31/125 (24%), Positives = 50/125 (40%), Gaps = 17/125 (13%)
Query: 55 GEDVEMACSFRGSGSPSYSLEIQWWYVRSHRDWTDKQAWASNQLKASQQEDAGKEAT-KI 113
GE VE C P + W + S N + E A +EA ++
Sbjct: 128 GEPVEFRCIPEAQNVPDRYFAVSWAFNSSLI-----ATMGPNAVPVLNSEFAHREARGQL 182
Query: 114 SVVKVVGSNISHKLRLSRVKPTDEGTYECRVI--------DFSDGKARHHKVKAYLRVQP 165
+V K S+ L++ ++ D G Y CRV +F D +++H K + V P
Sbjct: 183 NVAKE--SDSVFVLKIYHLRQEDSGKYNCRVTEREKTVTGEFIDKESKHPK-NIPIIVLP 239
Query: 166 GENSV 170
E+S+
Sbjct: 240 LESSI 244
>gi|209529703 signal-regulatory protein beta 1 isoform 3 precursor
[Homo sapiens]
Length = 398
Score = 33.9 bits (76), Expect = 0.098
Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 9/68 (13%)
Query: 121 SNISHKLRLSRVKPTDEGTYECRVIDFSDGKARHHKVKAYLRVQPGENSVLHLPEAP--- 177
+N+ +R+S + P D GTY C + F G H + K+ E SV P AP
Sbjct: 99 NNMDFSIRISNITPADAGTYYC--VKFRKGSPDHVEFKSGAGT---ELSVRAKPSAPVVS 153
Query: 178 -PAAPAPP 184
PAA A P
Sbjct: 154 GPAARATP 161
>gi|211904145 DAZ associated protein 2 isoform e [Homo sapiens]
Length = 86
Score = 33.5 bits (75), Expect = 0.13
Identities = 19/35 (54%), Positives = 20/35 (57%), Gaps = 8/35 (22%)
Query: 163 VQPGENSV----LHLPEAPPAAPAPP----PPKPG 189
VQP N V LHLP+APP APP PP PG
Sbjct: 15 VQPPGNPVYPQTLHLPQAPPYTDAPPAYSEPPPPG 49
>gi|187761324 shootin1 isoform a [Homo sapiens]
Length = 631
Score = 33.5 bits (75), Expect = 0.13
Identities = 26/56 (46%), Positives = 30/56 (53%), Gaps = 8/56 (14%)
Query: 148 SDGKARH--HKV-KAYLRVQPGENSVLHLPEAPPAAPAPPPPKPGKEL----RKRS 196
S+ KAR+ H V + RV ENSV P PP P PPPP P + L RKRS
Sbjct: 327 SEEKARNLKHSVDELQKRVNQSENSVPPPPPPPPPLP-PPPPNPIRSLMSMIRKRS 381
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.130 0.406
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,723,225
Number of Sequences: 37866
Number of extensions: 494753
Number of successful extensions: 9461
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 175
Number of HSP's successfully gapped in prelim test: 141
Number of HSP's that attempted gapping in prelim test: 7550
Number of HSP's gapped (non-prelim): 1631
length of query: 204
length of database: 18,247,518
effective HSP length: 97
effective length of query: 107
effective length of database: 14,574,516
effective search space: 1559473212
effective search space used: 1559473212
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.