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Search of human proteins with 17999541
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|17999541 vacuolar protein sorting 35 [Homo sapiens]
(796 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|17999541 vacuolar protein sorting 35 [Homo sapiens] 1578 0.0
gi|169171852 PREDICTED: similar to vacuolar protein sorting 35 [... 660 0.0
gi|115385972 chemokine-like factor superfamily 3 [Homo sapiens] 36 0.16
gi|32130528 chemokine-like factor superfamily 3 [Homo sapiens] 36 0.16
gi|32130526 chemokine-like factor superfamily 3 [Homo sapiens] 36 0.16
gi|21389401 chemokine-like factor superfamily 3 [Homo sapiens] 36 0.16
gi|26051204 calcium/calmodulin-dependent protein kinase II beta ... 33 1.4
gi|26051210 calcium/calmodulin-dependent protein kinase II beta ... 33 1.4
gi|26051214 calcium/calmodulin-dependent protein kinase II beta ... 33 1.4
gi|26051206 calcium/calmodulin-dependent protein kinase II beta ... 33 1.4
gi|26051216 calcium/calmodulin-dependent protein kinase II beta ... 33 1.4
gi|26051218 calcium/calmodulin-dependent protein kinase II beta ... 33 1.4
gi|26051212 calcium/calmodulin-dependent protein kinase II beta ... 33 1.4
gi|26051208 calcium/calmodulin-dependent protein kinase II beta ... 33 1.4
gi|25952118 calcium/calmodulin-dependent protein kinase II alpha... 32 2.3
gi|25952114 calcium/calmodulin-dependent protein kinase II alpha... 32 2.3
gi|26667199 calcium/calmodulin-dependent protein kinase II gamma... 31 5.2
gi|212549756 calcium/calmodulin-dependent protein kinase II delt... 31 5.2
gi|26667183 calcium/calmodulin-dependent protein kinase II delta... 31 5.2
gi|212549753 calcium/calmodulin-dependent protein kinase II delt... 31 5.2
gi|26667186 calcium/calmodulin-dependent protein kinase II delta... 31 5.2
gi|26667189 calcium/calmodulin-dependent protein kinase II delta... 31 5.2
gi|26667180 calcium/calmodulin-dependent protein kinase II delta... 31 5.2
gi|26667191 calcium/calmodulin-dependent protein kinase II gamma... 31 5.2
gi|26667211 calcium/calmodulin-dependent protein kinase II gamma... 31 5.2
gi|26667203 calcium/calmodulin-dependent protein kinase II gamma... 31 5.2
gi|26667196 calcium/calmodulin-dependent protein kinase II gamma... 31 5.2
gi|111154074 palmitoylated membrane protein 7 [Homo sapiens] 31 5.2
gi|34419635 heat shock 70kDa protein 6 (HSP70B') [Homo sapiens] 30 6.7
gi|82880656 coiled-coil domain containing 46 isoform a [Homo sap... 30 6.7
>gi|17999541 vacuolar protein sorting 35 [Homo sapiens]
Length = 796
Score = 1578 bits (4087), Expect = 0.0
Identities = 796/796 (100%), Positives = 796/796 (100%)
Query: 1 MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP 60
MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP
Sbjct: 1 MPTTQQSPQDEQEKLLDEAIQAVKVQSFQMKRCLDKNKLMDALKHASNMLGELRTSMLSP 60
Query: 61 KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK 120
KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK
Sbjct: 61 KSYYELYMAISDELHYLEVYLTDEFAKGRKVADLYELVQYAGNIIPRLYLLITVGVVYVK 120
Query: 121 SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDISDSM 180
SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDISDSM
Sbjct: 121 SFPQSRKDILKDLVEMCRGVQHPLRGLFLRNYLLQCTRNILPDEGEPTDEETTGDISDSM 180
Query: 181 DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ 240
DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ
Sbjct: 181 DFVLLNFAEMNKLWVRMQHQGHSRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQ 240
Query: 241 IVLTGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII 300
IVLTGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII
Sbjct: 241 IVLTGILEQVVNCRDALAQEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIII 300
Query: 301 ALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK 360
ALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK
Sbjct: 301 ALIDRLALFAHREDGPGIPADIKLFDIFSQQVATVIQSRQDMPSEDVVSLQVSLINLAMK 360
Query: 361 CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKH 420
CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKH
Sbjct: 361 CYPDRVDYVDKVLETTVEIFNKLNLEHIATSSAVSKELTRLLKIPVDTYNNILTVLKLKH 420
Query: 421 FHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQDQVDSIMNLVSTLIQDQPDQPVEDPD 480
FHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQDQVDSIMNLVSTLIQDQPDQPVEDPD
Sbjct: 421 FHPLFEYFDYESRKSMSCYVLSNVLDYNTEIVSQDQVDSIMNLVSTLIQDQPDQPVEDPD 480
Query: 481 PEDFADEQSLVGRFIHLLRSEDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLA 540
PEDFADEQSLVGRFIHLLRSEDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLA
Sbjct: 481 PEDFADEQSLVGRFIHLLRSEDPDQQYLILNTARKHFGAGGNQRIRFTLPPLVFAAYQLA 540
Query: 541 FRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE 600
FRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE
Sbjct: 541 FRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQGALAAGEIGFENHE 600
Query: 601 TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL 660
TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL
Sbjct: 601 TVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHEPLRTQCALAASKL 660
Query: 661 LKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF 720
LKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF
Sbjct: 661 LKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLF 720
Query: 721 IEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLR 780
IEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLR
Sbjct: 721 IEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQINKHFHNTLEHLRLR 780
Query: 781 RESPESEGPIYEGLIL 796
RESPESEGPIYEGLIL
Sbjct: 781 RESPESEGPIYEGLIL 796
>gi|169171852 PREDICTED: similar to vacuolar protein sorting 35
[Homo sapiens]
Length = 363
Score = 660 bits (1703), Expect = 0.0
Identities = 328/329 (99%), Positives = 329/329 (100%)
Query: 468 IQDQPDQPVEDPDPEDFADEQSLVGRFIHLLRSEDPDQQYLILNTARKHFGAGGNQRIRF 527
I+DQPDQPVEDPDPEDFADEQSLVGRFIHLLRSEDPDQQYLILNTARKHFGAGGNQRIRF
Sbjct: 35 IKDQPDQPVEDPDPEDFADEQSLVGRFIHLLRSEDPDQQYLILNTARKHFGAGGNQRIRF 94
Query: 528 TLPPLVFAAYQLAFRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQG 587
TLPPLVFAAYQLAFRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQG
Sbjct: 95 TLPPLVFAAYQLAFRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELPLRLFLQG 154
Query: 588 ALAAGEIGFENHETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHE 647
ALAAGEIGFENHETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHE
Sbjct: 155 ALAAGEIGFENHETVAYEFMSQAFSLYEDEISDSKAQLAAITLIIGTFERMKCFSEENHE 214
Query: 648 PLRTQCALAASKLLKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIA 707
PLRTQCALAASKLLKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIA
Sbjct: 215 PLRTQCALAASKLLKKPDQGRAVSTCAHLFWSGRNTDKNGEELHGGKRVMECLKKALKIA 274
Query: 708 NQCMDPSLQVQLFIEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQIN 767
NQCMDPSLQVQLFIEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQIN
Sbjct: 275 NQCMDPSLQVQLFIEILNRYIYFYEKENDAVTIQVLNQLIQKIREDLPNLESSEETEQIN 334
Query: 768 KHFHNTLEHLRLRRESPESEGPIYEGLIL 796
KHFHNTLEHLRLRRESPESEGPIYEGLIL
Sbjct: 335 KHFHNTLEHLRLRRESPESEGPIYEGLIL 363
>gi|115385972 chemokine-like factor superfamily 3 [Homo sapiens]
Length = 182
Score = 35.8 bits (81), Expect = 0.16
Identities = 35/137 (25%), Positives = 53/137 (38%), Gaps = 14/137 (10%)
Query: 472 PDQPVEDPDPEDFADEQSLVGRFIHLLRSEDPDQQYLILNTARKHFGAGGNQRIRFTL-- 529
P P DPDPE + G + LR+ P + +L R G I F
Sbjct: 3 PPDPDPDPDPEPAGGSRP--GPAVPGLRALLPARAFLCSLKGRLLLAESGLSFITFICYV 60
Query: 530 ---------PPLVFAAYQLAFRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELP 580
PL+ L F + + +++DKW+ C + F +ALI ++
Sbjct: 61 ASSASAFLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAISITA 120
Query: 581 LRLFLQGA-LAAGEIGF 596
+ + GA AAG GF
Sbjct: 121 IAKYSDGASKAAGVFGF 137
>gi|32130528 chemokine-like factor superfamily 3 [Homo sapiens]
Length = 182
Score = 35.8 bits (81), Expect = 0.16
Identities = 35/137 (25%), Positives = 53/137 (38%), Gaps = 14/137 (10%)
Query: 472 PDQPVEDPDPEDFADEQSLVGRFIHLLRSEDPDQQYLILNTARKHFGAGGNQRIRFTL-- 529
P P DPDPE + G + LR+ P + +L R G I F
Sbjct: 3 PPDPDPDPDPEPAGGSRP--GPAVPGLRALLPARAFLCSLKGRLLLAESGLSFITFICYV 60
Query: 530 ---------PPLVFAAYQLAFRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELP 580
PL+ L F + + +++DKW+ C + F +ALI ++
Sbjct: 61 ASSASAFLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAISITA 120
Query: 581 LRLFLQGA-LAAGEIGF 596
+ + GA AAG GF
Sbjct: 121 IAKYSDGASKAAGVFGF 137
>gi|32130526 chemokine-like factor superfamily 3 [Homo sapiens]
Length = 182
Score = 35.8 bits (81), Expect = 0.16
Identities = 35/137 (25%), Positives = 53/137 (38%), Gaps = 14/137 (10%)
Query: 472 PDQPVEDPDPEDFADEQSLVGRFIHLLRSEDPDQQYLILNTARKHFGAGGNQRIRFTL-- 529
P P DPDPE + G + LR+ P + +L R G I F
Sbjct: 3 PPDPDPDPDPEPAGGSRP--GPAVPGLRALLPARAFLCSLKGRLLLAESGLSFITFICYV 60
Query: 530 ---------PPLVFAAYQLAFRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELP 580
PL+ L F + + +++DKW+ C + F +ALI ++
Sbjct: 61 ASSASAFLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAISITA 120
Query: 581 LRLFLQGA-LAAGEIGF 596
+ + GA AAG GF
Sbjct: 121 IAKYSDGASKAAGVFGF 137
>gi|21389401 chemokine-like factor superfamily 3 [Homo sapiens]
Length = 182
Score = 35.8 bits (81), Expect = 0.16
Identities = 35/137 (25%), Positives = 53/137 (38%), Gaps = 14/137 (10%)
Query: 472 PDQPVEDPDPEDFADEQSLVGRFIHLLRSEDPDQQYLILNTARKHFGAGGNQRIRFTL-- 529
P P DPDPE + G + LR+ P + +L R G I F
Sbjct: 3 PPDPDPDPDPEPAGGSRP--GPAVPGLRALLPARAFLCSLKGRLLLAESGLSFITFICYV 60
Query: 530 ---------PPLVFAAYQLAFRYKENSKVDDKWEKKCQKIFSFAHQTISALIKAELAELP 580
PL+ L F + + +++DKW+ C + F +ALI ++
Sbjct: 61 ASSASAFLTAPLLEFLLALYFLFADAMQLNDKWQGLCWPMMDFLRCVTAALIYFAISITA 120
Query: 581 LRLFLQGA-LAAGEIGF 596
+ + GA AAG GF
Sbjct: 121 IAKYSDGASKAAGVFGF 137
>gi|26051204 calcium/calmodulin-dependent protein kinase II beta
isoform 1 [Homo sapiens]
Length = 666
Score = 32.7 bits (73), Expect = 1.4
Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 203 SRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQIVLT----GILEQVVNCRDALA 258
+RD +K ERE + R+L +N+VRL + ++ E + +V G L + + R+ +
Sbjct: 52 ARDHQKLEREARICRLLKHSNIVRLH--DSISEEGFHYLVFDLVTGGELFEDIVAREYYS 109
Query: 259 QEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIIIA 301
+ CI Q+ H + +H+++ +N+++A
Sbjct: 110 EADASHCIQQILEAVLHCHQM-------GVVHRDLKPENLLLA 145
>gi|26051210 calcium/calmodulin-dependent protein kinase II beta
isoform 4 [Homo sapiens]
Length = 517
Score = 32.7 bits (73), Expect = 1.4
Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 203 SRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQIVLT----GILEQVVNCRDALA 258
+RD +K ERE + R+L +N+VRL + ++ E + +V G L + + R+ +
Sbjct: 52 ARDHQKLEREARICRLLKHSNIVRLH--DSISEEGFHYLVFDLVTGGELFEDIVAREYYS 109
Query: 259 QEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIIIA 301
+ CI Q+ H + +H+++ +N+++A
Sbjct: 110 EADASHCIQQILEAVLHCHQM-------GVVHRDLKPENLLLA 145
>gi|26051214 calcium/calmodulin-dependent protein kinase II beta
isoform 6 [Homo sapiens]
Length = 492
Score = 32.7 bits (73), Expect = 1.4
Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 203 SRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQIVLT----GILEQVVNCRDALA 258
+RD +K ERE + R+L +N+VRL + ++ E + +V G L + + R+ +
Sbjct: 52 ARDHQKLEREARICRLLKHSNIVRLH--DSISEEGFHYLVFDLVTGGELFEDIVAREYYS 109
Query: 259 QEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIIIA 301
+ CI Q+ H + +H+++ +N+++A
Sbjct: 110 EADASHCIQQILEAVLHCHQM-------GVVHRDLKPENLLLA 145
>gi|26051206 calcium/calmodulin-dependent protein kinase II beta
isoform 2 [Homo sapiens]
Length = 542
Score = 32.7 bits (73), Expect = 1.4
Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 203 SRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQIVLT----GILEQVVNCRDALA 258
+RD +K ERE + R+L +N+VRL + ++ E + +V G L + + R+ +
Sbjct: 52 ARDHQKLEREARICRLLKHSNIVRLH--DSISEEGFHYLVFDLVTGGELFEDIVAREYYS 109
Query: 259 QEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIIIA 301
+ CI Q+ H + +H+++ +N+++A
Sbjct: 110 EADASHCIQQILEAVLHCHQM-------GVVHRDLKPENLLLA 145
>gi|26051216 calcium/calmodulin-dependent protein kinase II beta
isoform 7 [Homo sapiens]
Length = 479
Score = 32.7 bits (73), Expect = 1.4
Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 203 SRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQIVLT----GILEQVVNCRDALA 258
+RD +K ERE + R+L +N+VRL + ++ E + +V G L + + R+ +
Sbjct: 52 ARDHQKLEREARICRLLKHSNIVRLH--DSISEEGFHYLVFDLVTGGELFEDIVAREYYS 109
Query: 259 QEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIIIA 301
+ CI Q+ H + +H+++ +N+++A
Sbjct: 110 EADASHCIQQILEAVLHCHQM-------GVVHRDLKPENLLLA 145
>gi|26051218 calcium/calmodulin-dependent protein kinase II beta
isoform 8 [Homo sapiens]
Length = 449
Score = 32.7 bits (73), Expect = 1.4
Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 203 SRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQIVLT----GILEQVVNCRDALA 258
+RD +K ERE + R+L +N+VRL + ++ E + +V G L + + R+ +
Sbjct: 52 ARDHQKLEREARICRLLKHSNIVRLH--DSISEEGFHYLVFDLVTGGELFEDIVAREYYS 109
Query: 259 QEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIIIA 301
+ CI Q+ H + +H+++ +N+++A
Sbjct: 110 EADASHCIQQILEAVLHCHQM-------GVVHRDLKPENLLLA 145
>gi|26051212 calcium/calmodulin-dependent protein kinase II beta
isoform 5 [Homo sapiens]
Length = 503
Score = 32.7 bits (73), Expect = 1.4
Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 203 SRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQIVLT----GILEQVVNCRDALA 258
+RD +K ERE + R+L +N+VRL + ++ E + +V G L + + R+ +
Sbjct: 52 ARDHQKLEREARICRLLKHSNIVRLH--DSISEEGFHYLVFDLVTGGELFEDIVAREYYS 109
Query: 259 QEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIIIA 301
+ CI Q+ H + +H+++ +N+++A
Sbjct: 110 EADASHCIQQILEAVLHCHQM-------GVVHRDLKPENLLLA 145
>gi|26051208 calcium/calmodulin-dependent protein kinase II beta
isoform 3 [Homo sapiens]
Length = 518
Score = 32.7 bits (73), Expect = 1.4
Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 203 SRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQIVLT----GILEQVVNCRDALA 258
+RD +K ERE + R+L +N+VRL + ++ E + +V G L + + R+ +
Sbjct: 52 ARDHQKLEREARICRLLKHSNIVRLH--DSISEEGFHYLVFDLVTGGELFEDIVAREYYS 109
Query: 259 QEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIIIA 301
+ CI Q+ H + +H+++ +N+++A
Sbjct: 110 EADASHCIQQILEAVLHCHQM-------GVVHRDLKPENLLLA 145
>gi|25952118 calcium/calmodulin-dependent protein kinase II alpha
isoform 2 [Homo sapiens]
Length = 478
Score = 32.0 bits (71), Expect = 2.3
Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 203 SRDREKRERERQELRILVGTNLVRLSQLEGVNVERYK--QIVLTGILEQVVNCRDALAQE 260
+RD +K ERE + R+L N+VRL Y +V G L + + R+ ++
Sbjct: 51 ARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEA 110
Query: 261 YLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIIIA 301
CI Q+ H + +H+++ +N+++A
Sbjct: 111 DASHCIQQILEAVLHCHQM-------GVVHRDLKPENLLLA 144
>gi|25952114 calcium/calmodulin-dependent protein kinase II alpha
isoform 1 [Homo sapiens]
Length = 489
Score = 32.0 bits (71), Expect = 2.3
Identities = 24/101 (23%), Positives = 45/101 (44%), Gaps = 9/101 (8%)
Query: 203 SRDREKRERERQELRILVGTNLVRLSQLEGVNVERYK--QIVLTGILEQVVNCRDALAQE 260
+RD +K ERE + R+L N+VRL Y +V G L + + R+ ++
Sbjct: 51 ARDHQKLEREARICRLLKHPNIVRLHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEA 110
Query: 261 YLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIIIA 301
CI Q+ H + +H+++ +N+++A
Sbjct: 111 DASHCIQQILEAVLHCHQM-------GVVHRDLKPENLLLA 144
>gi|26667199 calcium/calmodulin-dependent protein kinase II gamma
isoform 3 [Homo sapiens]
Length = 518
Score = 30.8 bits (68), Expect = 5.2
Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 203 SRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQIVLT----GILEQVVNCRDALA 258
+RD +K ERE + R+L N+VRL + ++ E + +V G L + + R+ +
Sbjct: 52 ARDHQKLEREARICRLLKHPNIVRLH--DSISEEGFHYLVFDLVTGGELFEDIVAREYYS 109
Query: 259 QEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIIIA 301
+ CI Q+ H+ + +H+++ +N+++A
Sbjct: 110 EADASHCIHQILESVNHIHQHD-------IVHRDLKPENLLLA 145
>gi|212549756 calcium/calmodulin-dependent protein kinase II delta
isoform 4 [Homo sapiens]
Length = 489
Score = 30.8 bits (68), Expect = 5.2
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 203 SRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQIVLT----GILEQVVNCRDALA 258
+RD +K ERE + R+L N+VRL + ++ E + +V G L + + R+ +
Sbjct: 52 ARDHQKLEREARICRLLKHPNIVRLH--DSISEEGFHYLVFDLVTGGELFEDIVAREYYS 109
Query: 259 QEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIIIA 301
+ CI Q+ H LN +H+++ +N+++A
Sbjct: 110 EADASHCIQQILESVNHCH-LNGI------VHRDLKPENLLLA 145
>gi|26667183 calcium/calmodulin-dependent protein kinase II delta
isoform 1 [Homo sapiens]
Length = 478
Score = 30.8 bits (68), Expect = 5.2
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 203 SRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQIVLT----GILEQVVNCRDALA 258
+RD +K ERE + R+L N+VRL + ++ E + +V G L + + R+ +
Sbjct: 52 ARDHQKLEREARICRLLKHPNIVRLH--DSISEEGFHYLVFDLVTGGELFEDIVAREYYS 109
Query: 259 QEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIIIA 301
+ CI Q+ H LN +H+++ +N+++A
Sbjct: 110 EADASHCIQQILESVNHCH-LNGI------VHRDLKPENLLLA 145
>gi|212549753 calcium/calmodulin-dependent protein kinase II delta
isoform 5 [Homo sapiens]
Length = 492
Score = 30.8 bits (68), Expect = 5.2
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 203 SRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQIVLT----GILEQVVNCRDALA 258
+RD +K ERE + R+L N+VRL + ++ E + +V G L + + R+ +
Sbjct: 52 ARDHQKLEREARICRLLKHPNIVRLH--DSISEEGFHYLVFDLVTGGELFEDIVAREYYS 109
Query: 259 QEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIIIA 301
+ CI Q+ H LN +H+++ +N+++A
Sbjct: 110 EADASHCIQQILESVNHCH-LNGI------VHRDLKPENLLLA 145
>gi|26667186 calcium/calmodulin-dependent protein kinase II delta
isoform 1 [Homo sapiens]
Length = 478
Score = 30.8 bits (68), Expect = 5.2
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 203 SRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQIVLT----GILEQVVNCRDALA 258
+RD +K ERE + R+L N+VRL + ++ E + +V G L + + R+ +
Sbjct: 52 ARDHQKLEREARICRLLKHPNIVRLH--DSISEEGFHYLVFDLVTGGELFEDIVAREYYS 109
Query: 259 QEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIIIA 301
+ CI Q+ H LN +H+++ +N+++A
Sbjct: 110 EADASHCIQQILESVNHCH-LNGI------VHRDLKPENLLLA 145
>gi|26667189 calcium/calmodulin-dependent protein kinase II delta
isoform 2 [Homo sapiens]
Length = 478
Score = 30.8 bits (68), Expect = 5.2
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 203 SRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQIVLT----GILEQVVNCRDALA 258
+RD +K ERE + R+L N+VRL + ++ E + +V G L + + R+ +
Sbjct: 52 ARDHQKLEREARICRLLKHPNIVRLH--DSISEEGFHYLVFDLVTGGELFEDIVAREYYS 109
Query: 259 QEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIIIA 301
+ CI Q+ H LN +H+++ +N+++A
Sbjct: 110 EADASHCIQQILESVNHCH-LNGI------VHRDLKPENLLLA 145
>gi|26667180 calcium/calmodulin-dependent protein kinase II delta
isoform 3 [Homo sapiens]
Length = 499
Score = 30.8 bits (68), Expect = 5.2
Identities = 26/103 (25%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 203 SRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQIVLT----GILEQVVNCRDALA 258
+RD +K ERE + R+L N+VRL + ++ E + +V G L + + R+ +
Sbjct: 52 ARDHQKLEREARICRLLKHPNIVRLH--DSISEEGFHYLVFDLVTGGELFEDIVAREYYS 109
Query: 259 QEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIIIA 301
+ CI Q+ H LN +H+++ +N+++A
Sbjct: 110 EADASHCIQQILESVNHCH-LNGI------VHRDLKPENLLLA 145
>gi|26667191 calcium/calmodulin-dependent protein kinase II gamma
isoform 4 [Homo sapiens]
Length = 495
Score = 30.8 bits (68), Expect = 5.2
Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 203 SRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQIVLT----GILEQVVNCRDALA 258
+RD +K ERE + R+L N+VRL + ++ E + +V G L + + R+ +
Sbjct: 52 ARDHQKLEREARICRLLKHPNIVRLH--DSISEEGFHYLVFDLVTGGELFEDIVAREYYS 109
Query: 259 QEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIIIA 301
+ CI Q+ H+ + +H+++ +N+++A
Sbjct: 110 EADASHCIHQILESVNHIHQHD-------IVHRDLKPENLLLA 145
>gi|26667211 calcium/calmodulin-dependent protein kinase II gamma
isoform 6 [Homo sapiens]
Length = 504
Score = 30.8 bits (68), Expect = 5.2
Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 203 SRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQIVLT----GILEQVVNCRDALA 258
+RD +K ERE + R+L N+VRL + ++ E + +V G L + + R+ +
Sbjct: 52 ARDHQKLEREARICRLLKHPNIVRLH--DSISEEGFHYLVFDLVTGGELFEDIVAREYYS 109
Query: 259 QEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIIIA 301
+ CI Q+ H+ + +H+++ +N+++A
Sbjct: 110 EADASHCIHQILESVNHIHQHD-------IVHRDLKPENLLLA 145
>gi|26667203 calcium/calmodulin-dependent protein kinase II gamma
isoform 1 [Homo sapiens]
Length = 556
Score = 30.8 bits (68), Expect = 5.2
Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 203 SRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQIVLT----GILEQVVNCRDALA 258
+RD +K ERE + R+L N+VRL + ++ E + +V G L + + R+ +
Sbjct: 52 ARDHQKLEREARICRLLKHPNIVRLH--DSISEEGFHYLVFDLVTGGELFEDIVAREYYS 109
Query: 259 QEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIIIA 301
+ CI Q+ H+ + +H+++ +N+++A
Sbjct: 110 EADASHCIHQILESVNHIHQHD-------IVHRDLKPENLLLA 145
>gi|26667196 calcium/calmodulin-dependent protein kinase II gamma
isoform 2 [Homo sapiens]
Length = 527
Score = 30.8 bits (68), Expect = 5.2
Identities = 24/103 (23%), Positives = 50/103 (48%), Gaps = 13/103 (12%)
Query: 203 SRDREKRERERQELRILVGTNLVRLSQLEGVNVERYKQIVLT----GILEQVVNCRDALA 258
+RD +K ERE + R+L N+VRL + ++ E + +V G L + + R+ +
Sbjct: 52 ARDHQKLEREARICRLLKHPNIVRLH--DSISEEGFHYLVFDLVTGGELFEDIVAREYYS 109
Query: 259 QEYLMECIIQVFPDEFHLQTLNPFLRACAELHQNVNVKNIIIA 301
+ CI Q+ H+ + +H+++ +N+++A
Sbjct: 110 EADASHCIHQILESVNHIHQHD-------IVHRDLKPENLLLA 145
>gi|111154074 palmitoylated membrane protein 7 [Homo sapiens]
Length = 576
Score = 30.8 bits (68), Expect = 5.2
Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 450 EIVSQDQVDSIMNLVSTLIQDQPDQPVEDPDPEDFADEQSLVGRFIHLLRSEDP 503
+++S+ V +++++ T+ Q D PV P PED DE+ V + I L+++ +P
Sbjct: 97 KLLSKPNVKALLSVHDTVAQKNYD-PVLPPMPEDIDDEEDSV-KIIRLVKNREP 148
>gi|34419635 heat shock 70kDa protein 6 (HSP70B') [Homo sapiens]
Length = 643
Score = 30.4 bits (67), Expect = 6.7
Identities = 16/47 (34%), Positives = 26/47 (55%)
Query: 685 KNGEELHGGKRVMECLKKALKIANQCMDPSLQVQLFIEILNRYIYFY 731
K+G++L G KR + L+ A + A + + S Q L I+ L + FY
Sbjct: 250 KHGKDLSGNKRALRRLRTACERAKRTLSSSTQATLEIDSLFEGVDFY 296
>gi|82880656 coiled-coil domain containing 46 isoform a [Homo
sapiens]
Length = 955
Score = 30.4 bits (67), Expect = 6.7
Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 14/89 (15%)
Query: 694 KRVMECLKKALKIANQCMDPSLQVQLFIEILNRYIYFYEKENDAVTIQVLNQLIQKIRED 753
+R +E L+K L+ AN M+ Q+Q F K+ DA I + + K+RE+
Sbjct: 691 EREIENLEKQLRAAN--MEHENQIQEF------------KKRDAQVIADMEAQVHKLREE 736
Query: 754 LPNLESSEETEQINKHFHNTLEHLRLRRE 782
L N+ S + + + E R RE
Sbjct: 737 LINVNSQRKQQLVELGLLREEEKQRATRE 765
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.136 0.389
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 27,964,952
Number of Sequences: 37866
Number of extensions: 1191434
Number of successful extensions: 3670
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 3649
Number of HSP's gapped (non-prelim): 52
length of query: 796
length of database: 18,247,518
effective HSP length: 110
effective length of query: 686
effective length of database: 14,082,258
effective search space: 9660428988
effective search space used: 9660428988
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 66 (30.0 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.