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Search of human proteins with 17933774
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|17933774 transcription elongation factor A (SII)-like 2
[Homo sapiens]
(227 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|17933774 transcription elongation factor A (SII)-like 2 [Homo... 470 e-133
gi|55749459 transcription elongation factor A (SII)-like 4 [Homo... 355 2e-98
gi|55749442 transcription elongation factor A (SII)-like 4 [Homo... 355 2e-98
gi|65505873 transcription elongation factor A (SII)-like 4 [Homo... 355 2e-98
gi|55749451 transcription elongation factor A (SII)-like 4 [Homo... 355 2e-98
gi|61175239 transcription elongation factor A (SII)-like 5 [Homo... 185 2e-47
gi|55749431 transcription elongation factor A (SII)-like 3 [Homo... 168 4e-42
gi|14249718 transcription elongation factor A (SII)-like 3 [Homo... 168 4e-42
gi|118600971 transcription elongation factor A (SII)-like 6 [Hom... 145 4e-35
gi|55743140 WW domain binding protein 5 [Homo sapiens] 62 4e-10
gi|55743147 WW domain binding protein 5 [Homo sapiens] 62 4e-10
gi|10047100 WW domain binding protein 5 [Homo sapiens] 62 4e-10
gi|55743145 WW domain binding protein 5 [Homo sapiens] 62 4e-10
gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Hom... 56 3e-08
gi|55741709 RNA binding motif protein 25 [Homo sapiens] 54 1e-07
gi|24415404 MDN1, midasin homolog [Homo sapiens] 52 5e-07
gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens] 51 7e-07
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 50 1e-06
gi|13540523 nucleosomal binding protein 1 [Homo sapiens] 50 2e-06
gi|239508778 PREDICTED: hypothetical protein, partial [Homo sapi... 49 4e-06
gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo ... 48 6e-06
gi|55749466 transcription elongation factor A (SII)-like 8 [Homo... 48 6e-06
gi|23503247 transcription elongation factor A (SII)-like 8 [Homo... 48 6e-06
gi|151101407 prothymosin, alpha isoform 1 [Homo sapiens] 47 1e-05
gi|4759128 solute carrier family 24 (sodium/potassium/calcium ex... 47 1e-05
gi|117306167 proline-rich protein BstNI subfamily 3 precursor [H... 47 1e-05
gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens] 45 5e-05
gi|47578107 delangin isoform B [Homo sapiens] 45 5e-05
gi|47578105 delangin isoform A [Homo sapiens] 45 5e-05
gi|21361639 DIPB protein [Homo sapiens] 45 7e-05
>gi|17933774 transcription elongation factor A (SII)-like 2 [Homo
sapiens]
Length = 227
Score = 470 bits (1209), Expect = e-133
Identities = 227/227 (100%), Positives = 227/227 (100%)
Query: 1 MEKLFNENEGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKD 60
MEKLFNENEGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKD
Sbjct: 1 MEKLFNENEGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKD 60
Query: 61 KEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESEGEPES 120
KEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESEGEPES
Sbjct: 61 KEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESEGEPES 120
Query: 121 ETRAAGKRPAEDDIPRKAKRKTNKGLAQYLKQYKEAIHDMNFSNEDMIREFDNMARVEDK 180
ETRAAGKRPAEDDIPRKAKRKTNKGLAQYLKQYKEAIHDMNFSNEDMIREFDNMARVEDK
Sbjct: 121 ETRAAGKRPAEDDIPRKAKRKTNKGLAQYLKQYKEAIHDMNFSNEDMIREFDNMARVEDK 180
Query: 181 RRKSKQKLGAFLWMQRNLQDPFYPRGPREFRGGCRAPRRDTEDIPYV 227
RRKSKQKLGAFLWMQRNLQDPFYPRGPREFRGGCRAPRRDTEDIPYV
Sbjct: 181 RRKSKQKLGAFLWMQRNLQDPFYPRGPREFRGGCRAPRRDTEDIPYV 227
>gi|55749459 transcription elongation factor A (SII)-like 4 [Homo
sapiens]
Length = 215
Score = 355 bits (911), Expect = 2e-98
Identities = 179/228 (78%), Positives = 195/228 (85%), Gaps = 14/228 (6%)
Query: 1 MEKLFNENEGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRV-EEPLK 59
MEKL++ENEGM SNQGK++NEEQP E KPEV C LEDKKLENEG TEN GK EE LK
Sbjct: 1 MEKLYSENEGMASNQGKMENEEQPQDERKPEVTCTLEDKKLENEGKTENKGKTGDEEMLK 60
Query: 60 DKEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESEGEPE 119
DK KPES G+AK EGKSER+G+SEM+GGS+ EGKPE G+ PESEGEP
Sbjct: 61 DKGKPESEGEAK-EGKSEREGESEMEGGSEREGKPEIEGK------------PESEGEPG 107
Query: 120 SETRAAGKRPAEDDIPRKAKRKTNKGLAQYLKQYKEAIHDMNFSNEDMIREFDNMARVED 179
SETRAAGKRPAEDD+PRKAKRKTNKGLA YLK+YKEAIHDMNFSNEDMIREFDNMA+V+D
Sbjct: 108 SETRAAGKRPAEDDVPRKAKRKTNKGLAHYLKEYKEAIHDMNFSNEDMIREFDNMAKVQD 167
Query: 180 KRRKSKQKLGAFLWMQRNLQDPFYPRGPREFRGGCRAPRRDTEDIPYV 227
++RKSKQKLGAFLWMQRNLQDPFYPRGPREFRGGCRAPRRD EDIPYV
Sbjct: 168 EKRKSKQKLGAFLWMQRNLQDPFYPRGPREFRGGCRAPRRDIEDIPYV 215
>gi|55749442 transcription elongation factor A (SII)-like 4 [Homo
sapiens]
Length = 215
Score = 355 bits (911), Expect = 2e-98
Identities = 179/228 (78%), Positives = 195/228 (85%), Gaps = 14/228 (6%)
Query: 1 MEKLFNENEGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRV-EEPLK 59
MEKL++ENEGM SNQGK++NEEQP E KPEV C LEDKKLENEG TEN GK EE LK
Sbjct: 1 MEKLYSENEGMASNQGKMENEEQPQDERKPEVTCTLEDKKLENEGKTENKGKTGDEEMLK 60
Query: 60 DKEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESEGEPE 119
DK KPES G+AK EGKSER+G+SEM+GGS+ EGKPE G+ PESEGEP
Sbjct: 61 DKGKPESEGEAK-EGKSEREGESEMEGGSEREGKPEIEGK------------PESEGEPG 107
Query: 120 SETRAAGKRPAEDDIPRKAKRKTNKGLAQYLKQYKEAIHDMNFSNEDMIREFDNMARVED 179
SETRAAGKRPAEDD+PRKAKRKTNKGLA YLK+YKEAIHDMNFSNEDMIREFDNMA+V+D
Sbjct: 108 SETRAAGKRPAEDDVPRKAKRKTNKGLAHYLKEYKEAIHDMNFSNEDMIREFDNMAKVQD 167
Query: 180 KRRKSKQKLGAFLWMQRNLQDPFYPRGPREFRGGCRAPRRDTEDIPYV 227
++RKSKQKLGAFLWMQRNLQDPFYPRGPREFRGGCRAPRRD EDIPYV
Sbjct: 168 EKRKSKQKLGAFLWMQRNLQDPFYPRGPREFRGGCRAPRRDIEDIPYV 215
>gi|65505873 transcription elongation factor A (SII)-like 4 [Homo
sapiens]
Length = 215
Score = 355 bits (911), Expect = 2e-98
Identities = 179/228 (78%), Positives = 195/228 (85%), Gaps = 14/228 (6%)
Query: 1 MEKLFNENEGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRV-EEPLK 59
MEKL++ENEGM SNQGK++NEEQP E KPEV C LEDKKLENEG TEN GK EE LK
Sbjct: 1 MEKLYSENEGMASNQGKMENEEQPQDERKPEVTCTLEDKKLENEGKTENKGKTGDEEMLK 60
Query: 60 DKEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESEGEPE 119
DK KPES G+AK EGKSER+G+SEM+GGS+ EGKPE G+ PESEGEP
Sbjct: 61 DKGKPESEGEAK-EGKSEREGESEMEGGSEREGKPEIEGK------------PESEGEPG 107
Query: 120 SETRAAGKRPAEDDIPRKAKRKTNKGLAQYLKQYKEAIHDMNFSNEDMIREFDNMARVED 179
SETRAAGKRPAEDD+PRKAKRKTNKGLA YLK+YKEAIHDMNFSNEDMIREFDNMA+V+D
Sbjct: 108 SETRAAGKRPAEDDVPRKAKRKTNKGLAHYLKEYKEAIHDMNFSNEDMIREFDNMAKVQD 167
Query: 180 KRRKSKQKLGAFLWMQRNLQDPFYPRGPREFRGGCRAPRRDTEDIPYV 227
++RKSKQKLGAFLWMQRNLQDPFYPRGPREFRGGCRAPRRD EDIPYV
Sbjct: 168 EKRKSKQKLGAFLWMQRNLQDPFYPRGPREFRGGCRAPRRDIEDIPYV 215
>gi|55749451 transcription elongation factor A (SII)-like 4 [Homo
sapiens]
Length = 215
Score = 355 bits (911), Expect = 2e-98
Identities = 179/228 (78%), Positives = 195/228 (85%), Gaps = 14/228 (6%)
Query: 1 MEKLFNENEGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRV-EEPLK 59
MEKL++ENEGM SNQGK++NEEQP E KPEV C LEDKKLENEG TEN GK EE LK
Sbjct: 1 MEKLYSENEGMASNQGKMENEEQPQDERKPEVTCTLEDKKLENEGKTENKGKTGDEEMLK 60
Query: 60 DKEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESEGEPE 119
DK KPES G+AK EGKSER+G+SEM+GGS+ EGKPE G+ PESEGEP
Sbjct: 61 DKGKPESEGEAK-EGKSEREGESEMEGGSEREGKPEIEGK------------PESEGEPG 107
Query: 120 SETRAAGKRPAEDDIPRKAKRKTNKGLAQYLKQYKEAIHDMNFSNEDMIREFDNMARVED 179
SETRAAGKRPAEDD+PRKAKRKTNKGLA YLK+YKEAIHDMNFSNEDMIREFDNMA+V+D
Sbjct: 108 SETRAAGKRPAEDDVPRKAKRKTNKGLAHYLKEYKEAIHDMNFSNEDMIREFDNMAKVQD 167
Query: 180 KRRKSKQKLGAFLWMQRNLQDPFYPRGPREFRGGCRAPRRDTEDIPYV 227
++RKSKQKLGAFLWMQRNLQDPFYPRGPREFRGGCRAPRRD EDIPYV
Sbjct: 168 EKRKSKQKLGAFLWMQRNLQDPFYPRGPREFRGGCRAPRRDIEDIPYV 215
>gi|61175239 transcription elongation factor A (SII)-like 5 [Homo
sapiens]
Length = 206
Score = 185 bits (470), Expect = 2e-47
Identities = 103/229 (44%), Positives = 147/229 (64%), Gaps = 25/229 (10%)
Query: 1 MEKLFNENEGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKD 60
MEKL+ ENEG P N+ +++E GKPE +EG+TE+ GK EE
Sbjct: 1 MEKLYKENEGKPENERNLESE------GKPE-----------DEGSTEDEGKSDEE---- 39
Query: 61 KEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESEGEPES 120
EKP+ GK + EGK E +G+ +G + EG E+ G++EGE +P SE +P S+ +PES
Sbjct: 40 -EKPDMEGKTECEGKREDEGEPGDEGQLEDEGNQEKQGKSEGEDKPQSEGKPASQAKPES 98
Query: 121 ETRAAGKRPAEDDIPRKAKRKTNKGLAQYLKQYKEAIHDMNFSNEDMIREFDNMARVEDK 180
+ RAA KRPAED +PRKAKRKT++G K +E + + + S+E+M+RE +++R +++
Sbjct: 99 QPRAAEKRPAEDYVPRKAKRKTDRGTDDSPKDSQEDLQERHLSSEEMMRECGDVSRAQEE 158
Query: 181 RRKSKQKLGAFLWMQRNLQDPFYPRGPREFRG--GCRAPRRDTEDIPYV 227
RK KQK+G F WMQR++QDPF PRG R RG G ++D ED+PYV
Sbjct: 159 LRK-KQKMGGFHWMQRDVQDPFAPRGQRGVRGVRGGGRGQKDLEDVPYV 206
>gi|55749431 transcription elongation factor A (SII)-like 3 [Homo
sapiens]
Length = 200
Score = 168 bits (425), Expect = 4e-42
Identities = 97/229 (42%), Positives = 137/229 (59%), Gaps = 31/229 (13%)
Query: 1 MEKLFNENEGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKD 60
MEK +N+NEG N+GK ++E +P E GK EE
Sbjct: 1 MEKPYNKNEGNLENEGKPEDEVEPDDE-----------------------GKSDEE---- 33
Query: 61 KEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESEGEPES 120
EKP+ GK + EGK E +G+ +G + EG E+ GR+EGEG+P E +P S+ +PES
Sbjct: 34 -EKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQGRSEGEGKPQGEGKPASQAKPES 92
Query: 121 ETRAAGKRPAEDDIPRKAKRKTNKGLAQYLKQYKEAIHDMNFSNEDMIREFDNMARVEDK 180
+ RAA KRPAED +PRKAKRKT++G K +E + + + S+E+M+RE +++R +++
Sbjct: 93 QPRAAEKRPAEDYVPRKAKRKTDRGTDDSPKDSQEDLQERHLSSEEMMRECGDVSRAQEE 152
Query: 181 RRKSKQKLGAFLWMQRNLQDPFYPRGPREFRG--GCRAPRRDTEDIPYV 227
RK KQK+G F WMQR++QDPF PRG R RG G +R DIPY+
Sbjct: 153 LRK-KQKMGGFHWMQRDVQDPFAPRGQRGVRGVRGGGRGQRGLHDIPYL 200
>gi|14249718 transcription elongation factor A (SII)-like 3 [Homo
sapiens]
Length = 200
Score = 168 bits (425), Expect = 4e-42
Identities = 97/229 (42%), Positives = 137/229 (59%), Gaps = 31/229 (13%)
Query: 1 MEKLFNENEGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKD 60
MEK +N+NEG N+GK ++E +P E GK EE
Sbjct: 1 MEKPYNKNEGNLENEGKPEDEVEPDDE-----------------------GKSDEE---- 33
Query: 61 KEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESEGEPES 120
EKP+ GK + EGK E +G+ +G + EG E+ GR+EGEG+P E +P S+ +PES
Sbjct: 34 -EKPDVEGKTECEGKREDEGEPGDEGQLEDEGSQEKQGRSEGEGKPQGEGKPASQAKPES 92
Query: 121 ETRAAGKRPAEDDIPRKAKRKTNKGLAQYLKQYKEAIHDMNFSNEDMIREFDNMARVEDK 180
+ RAA KRPAED +PRKAKRKT++G K +E + + + S+E+M+RE +++R +++
Sbjct: 93 QPRAAEKRPAEDYVPRKAKRKTDRGTDDSPKDSQEDLQERHLSSEEMMRECGDVSRAQEE 152
Query: 181 RRKSKQKLGAFLWMQRNLQDPFYPRGPREFRG--GCRAPRRDTEDIPYV 227
RK KQK+G F WMQR++QDPF PRG R RG G +R DIPY+
Sbjct: 153 LRK-KQKMGGFHWMQRDVQDPFAPRGQRGVRGVRGGGRGQRGLHDIPYL 200
>gi|118600971 transcription elongation factor A (SII)-like 6 [Homo
sapiens]
Length = 183
Score = 145 bits (365), Expect = 4e-35
Identities = 80/202 (39%), Positives = 122/202 (60%), Gaps = 29/202 (14%)
Query: 1 MEKLFNENEGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKD 60
MEK +N+NEG N+GK ++E +P E GK EE
Sbjct: 1 MEKPYNKNEGNLENEGKPEDEVEPDDE-----------------------GKSDEE---- 33
Query: 61 KEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESEGEPES 120
EKP++ GK + EGK + +G+ +G + +G E+ G++EGEG+P E +P S+ +PE
Sbjct: 34 -EKPDAEGKTECEGKRKAEGEPGDEGQLEDKGSQEKQGKSEGEGKPQGEGKPASQAKPEG 92
Query: 121 ETRAAGKRPAEDDIPRKAKRKTNKGLAQYLKQYKEAIHDMNFSNEDMIREFDNMARVEDK 180
+ RAA KRPA D +PRKAKRKT++G K +E + + + S+E+M+RE +++R +++
Sbjct: 93 QPRAAEKRPAGDYVPRKAKRKTDRGTDDSPKDSQEDLQERHLSSEEMMRECGDVSRAQEE 152
Query: 181 RRKSKQKLGAFLWMQRNLQDPF 202
RK KQK+G F WMQR++QDPF
Sbjct: 153 LRK-KQKMGGFHWMQRDVQDPF 173
>gi|55743140 WW domain binding protein 5 [Homo sapiens]
Length = 104
Score = 62.0 bits (149), Expect = 4e-10
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 7/101 (6%)
Query: 103 EGEPDSEREPESEGEPESETRAAGKRPAEDDIPRKAKRKTNKGLAQYLKQYKEAIHDMNF 162
EG+P++E EP+ E EP+ E + + E++ KAK + L Q L+++KE IH+ +
Sbjct: 8 EGKPENESEPKHEEEPKPEEKPEEEEKLEEEA--KAKGTFRERLIQSLQEFKEDIHNRHL 65
Query: 163 SNEDMIREFDNMARVEDKRRKSKQKLGAFLW-MQRNLQDPF 202
SNEDM RE D + D+ R+ + KL W + RN P+
Sbjct: 66 SNEDMFREVDEI----DEIRRVRNKLIVMRWKVNRNHPYPY 102
Score = 33.9 bits (76), Expect = 0.12
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
Query: 9 EGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENT 50
EG P N+ + +EE+P E KPE E++KLE E + T
Sbjct: 8 EGKPENESEPKHEEEPKPEEKPE-----EEEKLEEEAKAKGT 44
Score = 28.5 bits (62), Expect = 4.9
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 39 KKLENEGNTENTGKRVEEPLKDKEKPESAGKAKGEGKSE 77
+K+E + E+ K EEP K +EKPE K + E K++
Sbjct: 5 QKMEGKPENESEPKHEEEP-KPEEKPEEEEKLEEEAKAK 42
>gi|55743147 WW domain binding protein 5 [Homo sapiens]
Length = 104
Score = 62.0 bits (149), Expect = 4e-10
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 7/101 (6%)
Query: 103 EGEPDSEREPESEGEPESETRAAGKRPAEDDIPRKAKRKTNKGLAQYLKQYKEAIHDMNF 162
EG+P++E EP+ E EP+ E + + E++ KAK + L Q L+++KE IH+ +
Sbjct: 8 EGKPENESEPKHEEEPKPEEKPEEEEKLEEEA--KAKGTFRERLIQSLQEFKEDIHNRHL 65
Query: 163 SNEDMIREFDNMARVEDKRRKSKQKLGAFLW-MQRNLQDPF 202
SNEDM RE D + D+ R+ + KL W + RN P+
Sbjct: 66 SNEDMFREVDEI----DEIRRVRNKLIVMRWKVNRNHPYPY 102
Score = 33.9 bits (76), Expect = 0.12
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
Query: 9 EGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENT 50
EG P N+ + +EE+P E KPE E++KLE E + T
Sbjct: 8 EGKPENESEPKHEEEPKPEEKPE-----EEEKLEEEAKAKGT 44
Score = 28.5 bits (62), Expect = 4.9
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 39 KKLENEGNTENTGKRVEEPLKDKEKPESAGKAKGEGKSE 77
+K+E + E+ K EEP K +EKPE K + E K++
Sbjct: 5 QKMEGKPENESEPKHEEEP-KPEEKPEEEEKLEEEAKAK 42
>gi|10047100 WW domain binding protein 5 [Homo sapiens]
Length = 104
Score = 62.0 bits (149), Expect = 4e-10
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 7/101 (6%)
Query: 103 EGEPDSEREPESEGEPESETRAAGKRPAEDDIPRKAKRKTNKGLAQYLKQYKEAIHDMNF 162
EG+P++E EP+ E EP+ E + + E++ KAK + L Q L+++KE IH+ +
Sbjct: 8 EGKPENESEPKHEEEPKPEEKPEEEEKLEEEA--KAKGTFRERLIQSLQEFKEDIHNRHL 65
Query: 163 SNEDMIREFDNMARVEDKRRKSKQKLGAFLW-MQRNLQDPF 202
SNEDM RE D + D+ R+ + KL W + RN P+
Sbjct: 66 SNEDMFREVDEI----DEIRRVRNKLIVMRWKVNRNHPYPY 102
Score = 33.9 bits (76), Expect = 0.12
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
Query: 9 EGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENT 50
EG P N+ + +EE+P E KPE E++KLE E + T
Sbjct: 8 EGKPENESEPKHEEEPKPEEKPE-----EEEKLEEEAKAKGT 44
Score = 28.5 bits (62), Expect = 4.9
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 39 KKLENEGNTENTGKRVEEPLKDKEKPESAGKAKGEGKSE 77
+K+E + E+ K EEP K +EKPE K + E K++
Sbjct: 5 QKMEGKPENESEPKHEEEP-KPEEKPEEEEKLEEEAKAK 42
>gi|55743145 WW domain binding protein 5 [Homo sapiens]
Length = 104
Score = 62.0 bits (149), Expect = 4e-10
Identities = 37/101 (36%), Positives = 58/101 (57%), Gaps = 7/101 (6%)
Query: 103 EGEPDSEREPESEGEPESETRAAGKRPAEDDIPRKAKRKTNKGLAQYLKQYKEAIHDMNF 162
EG+P++E EP+ E EP+ E + + E++ KAK + L Q L+++KE IH+ +
Sbjct: 8 EGKPENESEPKHEEEPKPEEKPEEEEKLEEEA--KAKGTFRERLIQSLQEFKEDIHNRHL 65
Query: 163 SNEDMIREFDNMARVEDKRRKSKQKLGAFLW-MQRNLQDPF 202
SNEDM RE D + D+ R+ + KL W + RN P+
Sbjct: 66 SNEDMFREVDEI----DEIRRVRNKLIVMRWKVNRNHPYPY 102
Score = 33.9 bits (76), Expect = 0.12
Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 5/42 (11%)
Query: 9 EGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENT 50
EG P N+ + +EE+P E KPE E++KLE E + T
Sbjct: 8 EGKPENESEPKHEEEPKPEEKPE-----EEEKLEEEAKAKGT 44
Score = 28.5 bits (62), Expect = 4.9
Identities = 15/39 (38%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Query: 39 KKLENEGNTENTGKRVEEPLKDKEKPESAGKAKGEGKSE 77
+K+E + E+ K EEP K +EKPE K + E K++
Sbjct: 5 QKMEGKPENESEPKHEEEP-KPEEKPEEEEKLEEEAKAK 42
>gi|78190492 retinitis pigmentosa GTPase regulator isoform C [Homo
sapiens]
Length = 1152
Score = 55.8 bits (133), Expect = 3e-08
Identities = 42/124 (33%), Positives = 60/124 (48%), Gaps = 14/124 (11%)
Query: 7 ENEGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKDKEKPES 66
E EG +G+ E+ EG+ E E+++ E EG E G+ EE + + + E
Sbjct: 853 EGEGKGEEEGEEGEGEEEGEEGEGEG----EEEEGEGEGEEEGEGEGEEEEGEGEGEEEG 908
Query: 67 AGKAK---GEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPD------SEREPESEGE 117
G+ + GEGK E +G+ G + EG+ E G EGEGE + E E E EGE
Sbjct: 909 EGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGE-GEDGEGEGEEEEGEWEGEEEEGEGEGE 967
Query: 118 PESE 121
E E
Sbjct: 968 EEGE 971
Score = 52.8 bits (125), Expect = 2e-07
Identities = 42/119 (35%), Positives = 61/119 (51%), Gaps = 9/119 (7%)
Query: 7 ENEGMPSNQGKIDNEEQPPH-EGKPEVACILEDKKLENEGNTENTGKRVEEPLKDKEKPE 65
E EG +GK + EE+ EG+ E E ++ E EG E + EE ++ E E
Sbjct: 813 EVEGGEVEEGKGEREEEEEEGEGEEEEG---EGEEEEGEGEEEEGEGKGEEEGEEGEGEE 869
Query: 66 SAGKAKGEGKSERKGKSEMQGGSKTEGKPERG---GRAEGEGEPDSEREPESEGEPESE 121
+ +GEG+ E +G+ E + + EG+ E G G EGEGE + E E E +GE E E
Sbjct: 870 EGEEGEGEGEEE-EGEGEGEEEGEGEGEEEEGEGEGEEEGEGEGE-EEEGEGKGEEEGE 926
Score = 52.4 bits (124), Expect = 3e-07
Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 14/116 (12%)
Query: 15 QGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKDKEKPESAG------ 68
+G + EE+ EGK E E +++E E E ++ EE +EK E G
Sbjct: 742 EGDREEEEEKEGEGKEEG----EGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGE 797
Query: 69 --KAKGEGKSERKGKSEMQGGSKTEGKPER-GGRAEGEGEPDSEREPESEGEPESE 121
+ +G G+ + +G E++GG EGK ER EGEGE + E EGE E E
Sbjct: 798 EEETEGRGEEKEEG-GEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEE 852
Score = 52.4 bits (124), Expect = 3e-07
Identities = 46/156 (29%), Positives = 72/156 (46%), Gaps = 21/156 (13%)
Query: 7 ENEGMPSNQGKIDNEE------QPPHEGKPEVACILEDKKLENEGNT-ENTGKRVEEPLK 59
E EG +G+ + EE + EG+ E E+++ E EG E G+ E +
Sbjct: 901 EGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEG----EEEEGEGEGEDGEGEGEEEEGEWE 956
Query: 60 -DKEKPESAGKAKGEGKSER-KGKSEMQGGS--------KTEGKPERGGRAEGEGEPDSE 109
++E+ E G+ +GEG+ E +G+ E + G + EG+ E G EGEGE + E
Sbjct: 957 GEEEEGEGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEEGEGEEEGEGEGEEE 1016
Query: 110 REPESEGEPESETRAAGKRPAEDDIPRKAKRKTNKG 145
E E EGE E E E + + + K +G
Sbjct: 1017 EEGEVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEG 1052
Score = 50.4 bits (119), Expect = 1e-06
Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 9/130 (6%)
Query: 5 FNENEGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKDKEKP 64
+ + E + K E + P EG+ E+A E KK + E + ++ + +++E
Sbjct: 669 WQDEEREKGEKDKGRGEMERPGEGEKELAEKEEWKKRDGEEQEQKEREQGHQKERNQEME 728
Query: 65 ESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEP-DSEREPESEGEPESETR 123
E + GEG+ E +G + E + E G+ EGEGE + ERE E EGE + E R
Sbjct: 729 EGGEEEHGEGEEE-------EGDREEEEEKEGEGKEEGEGEEVEGEREKE-EGERKKEER 780
Query: 124 AAGKRPAEDD 133
A + E++
Sbjct: 781 AGKEEKGEEE 790
Score = 49.3 bits (116), Expect = 3e-06
Identities = 42/132 (31%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Query: 7 ENEGMPSNQGKIDNEE-----QPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKDK 61
E EG +QG+ + EE + EG +E+ K E E E G+ EE + +
Sbjct: 788 EEEG---DQGEGEEEETEGRGEEKEEGGEVEGGEVEEGKGERE-EEEEEGEGEEEEGEGE 843
Query: 62 EKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESEGEPESE 121
E+ + +GEGK E +G+ +G + EG+ G E EGE + E E E EGE E E
Sbjct: 844 EEEGEGEEEEGEGKGEEEGE---EGEGEEEGEEGEGEGEEEEGEGEGEEEGEGEGE-EEE 899
Query: 122 TRAAGKRPAEDD 133
G+ E +
Sbjct: 900 GEGEGEEEGEGE 911
Score = 49.3 bits (116), Expect = 3e-06
Identities = 37/102 (36%), Positives = 52/102 (50%), Gaps = 10/102 (9%)
Query: 27 EGKPEVACILEDKKLENEGNTENTGKRVEEPLKDKEKPESAGKAKGE-GKSERKGKSEMQ 85
EGK E E+++ E EG E EE ++E+ E G+ +GE G+ E +G+
Sbjct: 821 EGKGE----REEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGEEGEGEEEGEEGEG 876
Query: 86 GGSKTEGKPERGGRAEGEGEPDSEREPESEGEPESETRAAGK 127
G + EG+ E G EGEGE + E E EGE E E G+
Sbjct: 877 EGEEEEGEGE--GEEEGEGEGEEE---EGEGEGEEEGEGEGE 913
Score = 47.8 bits (112), Expect = 8e-06
Identities = 41/130 (31%), Positives = 58/130 (44%), Gaps = 8/130 (6%)
Query: 7 ENEGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKDKEKPES 66
E EG +G+ + EE+ EG+ E E ++ E EG E G+ E +++E
Sbjct: 882 EGEGEGEEEGEGEGEEEEG-EGEGEEEGEGEGEEEEGEGKGEEEGEEGEGEGEEEEGEGE 940
Query: 67 AGKAKGEGKSER---KGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESEGEPESETR 123
+GEG+ E +G+ E G E G EGEGE E E E EGE E E
Sbjct: 941 GEDGEGEGEEEEGEWEGEEEEGEGEGEEEGEGEGEEGEGEGE---EEEGEGEGE-EEEGE 996
Query: 124 AAGKRPAEDD 133
G+ E +
Sbjct: 997 EEGEEEGEGE 1006
Score = 46.6 bits (109), Expect = 2e-05
Identities = 44/166 (26%), Positives = 79/166 (47%), Gaps = 17/166 (10%)
Query: 7 ENEGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTEN-TGKRVEEPLKDKEKPE 65
E EG +G+ + EE+ EG+ E E ++ E EG E G+ EE +++ + E
Sbjct: 945 EGEG-EEEEGEWEGEEEEG-EGEGEEEGEGEGEEGEGEGEEEEGEGEGEEEEGEEEGEEE 1002
Query: 66 SAGKAKGEGKSERKGKSEMQG----------GSKTEGKPERGGRA-EGEGEPDS---ERE 111
G+ +GEG+ E + + E++G G + EG+ E R EGEGE + E E
Sbjct: 1003 GEGEEEGEGEGEEEEEGEVEGEVEGEEGEGEGEEEEGEEEGEEREKEGEGEENRRNREEE 1062
Query: 112 PESEGEPESETRAAGKRPAEDDIPRKAKRKTNKGLAQYLKQYKEAI 157
E EG+ + +R ++ + +K K + ++ K+++
Sbjct: 1063 EEEEGKYQETGEEENERQDGEEYKKVSKIKGSVKYGKHKTYQKKSV 1108
Score = 43.5 bits (101), Expect = 1e-04
Identities = 42/129 (32%), Positives = 57/129 (44%), Gaps = 15/129 (11%)
Query: 17 KIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEP--LKDKEKPESAGKAKGEG 74
K D EEQ E E E + EG E G+ EE +++E+ E GK +GEG
Sbjct: 704 KRDGEEQEQKER--EQGHQKERNQEMEEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEG 761
Query: 75 --------KSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSER--EPESEGEPESETRA 124
K E + K E + G + +G+ E G + EGE E R E E GE E
Sbjct: 762 EEVEGEREKEEGERKKEERAGKEEKGE-EEGDQGEGEEEETEGRGEEKEEGGEVEGGEVE 820
Query: 125 AGKRPAEDD 133
GK E++
Sbjct: 821 EGKGEREEE 829
Score = 43.1 bits (100), Expect = 2e-04
Identities = 47/193 (24%), Positives = 73/193 (37%), Gaps = 54/193 (27%)
Query: 6 NENEGMPSNQGKIDNEEQPPHEGKPEVACILED----KKLENEGNTENTGKRVEEP---- 57
++ G+ + + + E H G+ E IL D K +EG ++ G+ + P
Sbjct: 596 SKGNGIEEQEVEANEENVKVHGGRKEKTEILSDDLTDKAEVSEGKAKSVGEAEDGPEGRG 655
Query: 58 -------------LKDKEKPESAGKAKGEGKSERKGKSEMQGGSKTE------------- 91
+D+E+ E K KG G+ ER G+ E + K E
Sbjct: 656 DGTCEEGSSGAEHWQDEER-EKGEKDKGRGEMERPGEGEKELAEKEEWKKRDGEEQEQKE 714
Query: 92 ----------------GKPERGGRAEGEGEPDSEREPESEGEPESE-TRAAGKRPAEDDI 134
G+ E G E EG+ + E E E EG+ E E G+R E+
Sbjct: 715 REQGHQKERNQEMEEGGEEEHGEGEEEEGDREEEEEKEGEGKEEGEGEEVEGEREKEEGE 774
Query: 135 PRKAKR--KTNKG 145
+K +R K KG
Sbjct: 775 RKKEERAGKEEKG 787
Score = 43.1 bits (100), Expect = 2e-04
Identities = 43/127 (33%), Positives = 54/127 (42%), Gaps = 18/127 (14%)
Query: 7 ENEGMPSNQGKIDNEEQPPHEG--KPEVACILEDKKLEN----EGNTENTGKRVEEPLKD 60
E EG +G+ E+ EG K E E+K E EG E T R EE
Sbjct: 752 EGEGKEEGEGEEVEGEREKEEGERKKEERAGKEEKGEEEGDQGEGEEEETEGRGEEK--- 808
Query: 61 KEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGG------RAEGEGEPDSEREPES 114
+E E G EGK ER+ + E G + EG+ E EG+GE + E E
Sbjct: 809 EEGGEVEGGEVEEGKGEREEEEEEGEGEEEEGEGEEEEGEGEEEEGEGKGEEEGE---EG 865
Query: 115 EGEPESE 121
EGE E E
Sbjct: 866 EGEEEGE 872
>gi|55741709 RNA binding motif protein 25 [Homo sapiens]
Length = 843
Score = 53.9 bits (128), Expect = 1e-07
Identities = 47/179 (26%), Positives = 77/179 (43%), Gaps = 9/179 (5%)
Query: 37 EDKKLENEGNTENTGKRVEEPLKDKEKPESAGKAKGEGKSERKGKSEMQGGSKT---EGK 93
++K+ E E + R +E +D+++ + + K +S + S+ E +
Sbjct: 337 KEKERERERERDRDRDRTKERDRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERE 396
Query: 94 PERGGRAEGEGEPDSEREPESEGEPESETRAAGKRPAEDDIPRK-AKRKTNKGLAQYLKQ 152
ER E E E + ERE E E E E E KR E+D +RK + L +
Sbjct: 397 REREREREREREREREREREREREREREREKDKKRDREEDEEDAYERRKLERKLREKEAA 456
Query: 153 YKEAIHDMNFSNEDMIREFDNMARVEDKRR----KSKQKLGAFLW-MQRNLQDPFYPRG 206
Y+E + + RE++ A E++RR K ++L FL + DP Y RG
Sbjct: 457 YQERLKNWEIRERKKTREYEKEAEREEERRREMAKEAKRLKEFLEDYDDDRDDPKYYRG 515
Score = 37.7 bits (86), Expect = 0.008
Identities = 39/162 (24%), Positives = 73/162 (45%), Gaps = 12/162 (7%)
Query: 39 KKLENE-GNTENTGKRVEEPLKDKEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERG 97
KKLE E G E + +E+ +++E+ + + E + ER+ + E + + E + ER
Sbjct: 289 KKLEEEKGKKEKERQEIEKERRERERERERERERREREREREREREREKEKERERERERD 348
Query: 98 G----RAEGEGEPDSEREPESEGEPESETRAAGKRPAEDDIPRKAKRKTNKGLAQYLKQY 153
E + + D ER+ + + E S+ R E R+ +R+ + + ++
Sbjct: 349 RDRDRTKERDRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERERERERERERERE 408
Query: 154 KEAIHDMNFSNE-DMIREFDNMA-RVED-----KRRKSKQKL 188
+E + E + RE D R ED +RRK ++KL
Sbjct: 409 REREREREREREREREREKDKKRDREEDEEDAYERRKLERKL 450
Score = 37.0 bits (84), Expect = 0.014
Identities = 26/98 (26%), Positives = 47/98 (47%), Gaps = 3/98 (3%)
Query: 36 LEDKKLENEGNTENTGKRVEEPLKDKEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPE 95
LED + + G +++ L+D+EK A + + K E++ E++ EG P+
Sbjct: 500 LEDYDDDRDDPKYYRGSALQKRLRDREKEMEADER--DRKREKEELEEIRQRLLAEGHPD 557
Query: 96 RGGRAEG-EGEPDSEREPESEGEPESETRAAGKRPAED 132
+ E E + R+P+ + EPESE K+ E+
Sbjct: 558 PDAELQRMEQEAERRRQPQIKQEPESEEEEEEKQEKEE 595
Score = 33.1 bits (74), Expect = 0.20
Identities = 33/140 (23%), Positives = 60/140 (42%), Gaps = 9/140 (6%)
Query: 49 NTGKRVEEPLKDKEKP-ESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPD 107
+T K++EE KEK + K + E + ER+ + E + E + ER E E E +
Sbjct: 286 DTHKKLEEEKGKKEKERQEIEKERRERERERERERE-----RREREREREREREREKEKE 340
Query: 108 SEREPESEGEPESETRAAGKRPAEDDIPRKAKRKTNKGLAQYLKQYKEAIHDMNFSNEDM 167
ERE E + + + R E D R +R +++ + + K + E
Sbjct: 341 RERERERDRDRDRTKERDRDRDRERDRDRDRERSSDRNKDRSRSREKSRDRERERERE-- 398
Query: 168 IREFDNMARVEDKRRKSKQK 187
RE + E +R + +++
Sbjct: 399 -RERERERERERERERERER 417
>gi|24415404 MDN1, midasin homolog [Homo sapiens]
Length = 5596
Score = 51.6 bits (122), Expect = 5e-07
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 15/140 (10%)
Query: 2 EKLFNENEGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEG-----NTENTGKRVEE 56
E+ ++ENE P + N+E+ P +PE + +D L++E +T+N E
Sbjct: 4855 ERDYDENEVDPYH----GNQEKVP---EPEALDLPDDLNLDSEDKNGGEDTDNEEGEEEN 4907
Query: 57 PLKDKEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDS---EREPE 113
PL+ KEKPE AG E ++E Q + E P +AEGE E D+ +++ +
Sbjct: 4908 PLEIKEKPEEAGHEAEERGETETDQNESQSPQEPEEGPSEDDKAEGEEEMDTGADDQDGD 4967
Query: 114 SEGEPESETRAAGKRPAEDD 133
+ PE + + E D
Sbjct: 4968 AAQHPEEHSEEQQQSVEEKD 4987
Score = 33.9 bits (76), Expect = 0.12
Identities = 38/162 (23%), Positives = 59/162 (36%), Gaps = 33/162 (20%)
Query: 40 KLENEGNTENTGKRVEEPLKDKEKPESAGKAKGEG--------------------KSERK 79
++ NE E+T ++ +E KDKE P+S KGE + E
Sbjct: 4692 QIGNEEQVEDTFQKGQE--KDKEDPDSKSDIKGEDNAIEMSEDFDGKMHDGELEEQEEDD 4749
Query: 80 GKSEMQGGSKTEGKPERGGRAEGE------GEPDSEREPESEGEPESET-----RAAGKR 128
KS+ +GG + + G + G+ D E + E E ET +
Sbjct: 4750 EKSDSEGGDLDKHMGDLNGEEADKLDERLWGDDDEEEDEEEEDNKTEETGPGMDEEDSEL 4809
Query: 129 PAEDDIPRKAKRKTNKGLAQYLKQYKEAIHDMNFSNEDMIRE 170
A+DD +K ++ +EA D ED I E
Sbjct: 4810 VAKDDNLDSGNSNKDKSQQDKKEEKEEAEADDGGQGEDKINE 4851
>gi|117414137 retinitis pigmentosa 1-like 1 [Homo sapiens]
Length = 2400
Score = 51.2 bits (121), Expect = 7e-07
Identities = 38/141 (26%), Positives = 61/141 (43%), Gaps = 20/141 (14%)
Query: 7 ENEGMPSNQG----KIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEP----- 57
E E P ++G + + E QP EG +E + E E E+ G +E
Sbjct: 2122 EGEAQPESEGIEAPEAEGEAQPESEG-------VEAQDAEGEAQPESEGIEAQEAEEEAQ 2174
Query: 58 --LKDKEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESE 115
L+ E PE+ G+A+ E + ++E + + EG E + EP+ PE+E
Sbjct: 2175 PELEGVEAPEAEGEAQPESEGIEAPEAEGEAQPELEGVEAPEAEEEAQPEPEGVETPEAE 2234
Query: 116 GE--PESETRAAGKRPAEDDI 134
GE PESE G++ +
Sbjct: 2235 GEAQPESEGETQGEKKGSPQV 2255
Score = 50.4 bits (119), Expect = 1e-06
Identities = 46/149 (30%), Positives = 68/149 (45%), Gaps = 27/149 (18%)
Query: 7 ENEGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKDKEKPES 66
E E P + G E QP EG+ E +K E + E+ G VE P ++E E+
Sbjct: 2013 EEEAQPESDGV---EAQPKSEGEEAQEVEGETQKTEGDAQPESDG--VEAPEAEEEAQEA 2067
Query: 67 AGK---AKGEG--KSERKGKSEMQGGSKTEGK----PERGGRA-----------EGEGEP 106
G+ A+GE +SE E +G ++ E + PE G A EGE +P
Sbjct: 2068 EGEVQEAEGEAHPESEDVDAQEAEGEAQPESEGVEAPEAEGEAQKAEGIEAPETEGEAQP 2127
Query: 107 DSE--REPESEGEPESETRAAGKRPAEDD 133
+SE PE+EGE + E+ + AE +
Sbjct: 2128 ESEGIEAPEAEGEAQPESEGVEAQDAEGE 2156
Score = 48.1 bits (113), Expect = 6e-06
Identities = 43/149 (28%), Positives = 64/149 (42%), Gaps = 29/149 (19%)
Query: 7 ENEGMPSNQG----KIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKDKE 62
E E P ++G + E QP EG +E ++ E E E G VE P + E
Sbjct: 2138 EGEAQPESEGVEAQDAEGEAQPESEG-------IEAQEAEEEAQPELEG--VEAPEAEGE 2188
Query: 63 -KPESAG----KAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESEGE 117
+PES G +A+GE + E +G + + + +PE E EGE E E E++GE
Sbjct: 2189 AQPESEGIEAPEAEGEAQPELEGVEAPEAEEEAQPEPEGVETPEAEGEAQPESEGETQGE 2248
Query: 118 P-----------ESETRAAGKRPAEDDIP 135
+SE + P +D P
Sbjct: 2249 KKGSPQVSLGDGQSEEASESSSPVPEDRP 2277
Score = 47.4 bits (111), Expect = 1e-05
Identities = 50/183 (27%), Positives = 76/183 (41%), Gaps = 36/183 (19%)
Query: 2 EKLFNENEGMPSNQGKIDNEEQPPHEGKPEV----ACILEDKKLENEGNTENTGKRVEEP 57
E+ E EG + ++ ++ E +PE A +E + E EG + + VE P
Sbjct: 1944 EEAAQEAEGQTQPESEVIESQEAEEEAQPESEDVEALEVEVETQEAEGEAQPESEDVEAP 2003
Query: 58 LKDKEKPESAGKAKGEG-------KSERKGKSEMQGGS-KTEG--KPERGG--------- 98
+ E E+ +A+ E KSE + E++G + KTEG +PE G
Sbjct: 2004 EAEGEMQEAEEEAQPESDGVEAQPKSEGEEAQEVEGETQKTEGDAQPESDGVEAPEAEEE 2063
Query: 99 ---------RAEGEGEPDSE----REPESEGEPESETRAAGKRPAEDDIPRKAKRKTNKG 145
AEGE P+SE +E E E +PESE A + E + +G
Sbjct: 2064 AQEAEGEVQEAEGEAHPESEDVDAQEAEGEAQPESEGVEAPEAEGEAQKAEGIEAPETEG 2123
Query: 146 LAQ 148
AQ
Sbjct: 2124 EAQ 2126
Score = 45.8 bits (107), Expect = 3e-05
Identities = 42/135 (31%), Positives = 62/135 (45%), Gaps = 20/135 (14%)
Query: 7 ENEGMPSNQG-KIDNEEQPPHEGKPEVACILEDKKL-ENEGNTENTGKRVEEPLKDKE-K 63
E E P ++G + E E + E ED + E EG + + VE P + E +
Sbjct: 1841 EGEAQPESEGVEAPEAEGDAQEAEGEAQPESEDVEAPEAEGEAQPESEDVETPEAEWEVQ 1900
Query: 64 PESAGKAKGEGKSERKGKSEMQGGSKTEGK--PERGG-----------RAEGEGEPDSE- 109
PES G E + E + ++E +TEG+ PE G AEG+ +P+SE
Sbjct: 1901 PESEGAEAPEAEKEAQPETESVEALETEGEDEPESEGAEAQEAEEAAQEAEGQTQPESEV 1960
Query: 110 ---REPESEGEPESE 121
+E E E +PESE
Sbjct: 1961 IESQEAEEEAQPESE 1975
Score = 44.7 bits (104), Expect = 7e-05
Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 9/114 (7%)
Query: 19 DNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKDKEKPESAGKAKGEGKSER 78
+ E QP EG + E EG+ + + +D E PE+ G+A+ E +
Sbjct: 1841 EGEAQPESEGV---------EAPEAEGDAQEAEGEAQPESEDVEAPEAEGEAQPESEDVE 1891
Query: 79 KGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESEGEPESETRAAGKRPAED 132
++E + ++EG E + E +S E+EGE E E+ A + AE+
Sbjct: 1892 TPEAEWEVQPESEGAEAPEAEKEAQPETESVEALETEGEDEPESEGAEAQEAEE 1945
Score = 43.9 bits (102), Expect = 1e-04
Identities = 37/117 (31%), Positives = 49/117 (41%), Gaps = 9/117 (7%)
Query: 7 ENEGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKDKEKPES 66
E EG + +++ E+ EG E LE+ K EG + G+ +EE LK++ PE
Sbjct: 1345 EGEGQQEEEAQLEEIEETGGEGLQEEGVQLEEVKEGPEGGLQ--GEALEEGLKEEGLPEE 1402
Query: 67 AGKAKGEGKSERKGKSEMQGGSKTEGKP---ERGGRAEGEGEPDSEREPESEGEPES 120
G G+ SE S G E P E GRA EP E EP S
Sbjct: 1403 -GSVHGQELSE---ASSPDGKGSQEDDPVQEEEAGRASASAEPCPAEGTEEPTEPPS 1455
Score = 41.6 bits (96), Expect = 6e-04
Identities = 30/96 (31%), Positives = 48/96 (50%), Gaps = 6/96 (6%)
Query: 42 ENEGNTENTGKRVEEPLKDKEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAE 101
E EG + + VE P + + E+ G+A+ E SE E +G ++ E + AE
Sbjct: 1839 EAEGEAQPESEGVEAPEAEGDAQEAEGEAQPE--SEDVEAPEAEGEAQPESEDVETPEAE 1896
Query: 102 GEGEPDSER----EPESEGEPESETRAAGKRPAEDD 133
E +P+SE E E E +PE+E+ A + ED+
Sbjct: 1897 WEVQPESEGAEAPEAEKEAQPETESVEALETEGEDE 1932
Score = 41.6 bits (96), Expect = 6e-04
Identities = 30/115 (26%), Positives = 53/115 (46%), Gaps = 12/115 (10%)
Query: 15 QGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKDKEKPESAGKAKGEG 74
+G++ E H +V + ++ E E E+ G E + +K E + EG
Sbjct: 2068 EGEVQEAEGEAHPESEDV----DAQEAEGEAQPESEGVEAPEAEGEAQKAEGIEAPETEG 2123
Query: 75 KSERKGKSEMQGGSKTEGKPERGG----RAEGEGEPDSE----REPESEGEPESE 121
+++ + + ++ E +PE G AEGE +P+SE +E E E +PE E
Sbjct: 2124 EAQPESEGIEAPEAEGEAQPESEGVEAQDAEGEAQPESEGIEAQEAEEEAQPELE 2178
Score = 38.5 bits (88), Expect = 0.005
Identities = 27/137 (19%), Positives = 57/137 (41%), Gaps = 13/137 (9%)
Query: 8 NEGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKDKEKPESA 67
+EG + N ++ P G+ E + ++++ + + + G + E ++ E
Sbjct: 1741 DEGEDGEGSQRLNRDKDPKLGEAEGDAMAQEREGKTHNSETSAGSELGEAEQEGEGISER 1800
Query: 68 GKAKGEGKSERKGKSEMQGGSKTEGKPERGG----------RAEGEGEPDSEREPESEGE 117
G+ G+G + +QG + G + G AEGE +P+SE E E
Sbjct: 1801 GETGGQGSGH---EDNLQGEAAAGGDQDPGQSDGAEGIEAPEAEGEAQPESEGVEAPEAE 1857
Query: 118 PESETRAAGKRPAEDDI 134
+++ +P +D+
Sbjct: 1858 GDAQEAEGEAQPESEDV 1874
Score = 37.0 bits (84), Expect = 0.014
Identities = 36/140 (25%), Positives = 56/140 (40%), Gaps = 26/140 (18%)
Query: 7 ENEGMPSNQG----KIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKDKE 62
E E P ++ + + E QP EG E + E E E E + ++
Sbjct: 1880 EGEAQPESEDVETPEAEWEVQPESEGA-------EAPEAEKEAQPETESVEALET-EGED 1931
Query: 63 KPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSE-----------RE 111
+PES G E + + E +G ++ E + AE E +P+SE +E
Sbjct: 1932 EPESEG---AEAQEAEEAAQEAEGQTQPESEVIESQEAEEEAQPESEDVEALEVEVETQE 1988
Query: 112 PESEGEPESETRAAGKRPAE 131
E E +PESE A + E
Sbjct: 1989 AEGEAQPESEDVEAPEAEGE 2008
Score = 37.0 bits (84), Expect = 0.014
Identities = 32/119 (26%), Positives = 47/119 (39%), Gaps = 16/119 (13%)
Query: 7 ENEGMPSNQG----KIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKDKE 62
E E P +G + + E QP EG +E + E E E G VE P ++E
Sbjct: 2170 EEEAQPELEGVEAPEAEGEAQPESEG-------IEAPEAEGEAQPELEG--VEAPEAEEE 2220
Query: 63 ---KPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESEGEP 118
+PE + EG+++ + + E QG K + G E S PE P
Sbjct: 2221 AQPEPEGVETPEAEGEAQPESEGETQGEKKGSPQVSLGDGQSEEASESSSPVPEDRPTP 2279
Score = 32.0 bits (71), Expect = 0.45
Identities = 25/136 (18%), Positives = 55/136 (40%), Gaps = 6/136 (4%)
Query: 16 GKIDNEEQ---PPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKDKEKPE---SAGK 69
G ++N++Q P AC + + E + + +E+ ++ + E K
Sbjct: 1248 GDLENQQQCCFPTFLNARACACATNEDEAERDSEEQRASSNLEQLAENTVQEEVQLEETK 1307
Query: 70 AKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESEGEPESETRAAGKRP 129
EG+ ++ +++ EG E G + E E + E + E E + E G+
Sbjct: 1308 EGTEGEGLQEEAVQLEETKTEEGLQEEGVQLEETKETEGEGQQEEEAQLEEIEETGGEGL 1367
Query: 130 AEDDIPRKAKRKTNKG 145
E+ + + ++ +G
Sbjct: 1368 QEEGVQLEEVKEGPEG 1383
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 50.4 bits (119), Expect = 1e-06
Identities = 43/201 (21%), Positives = 79/201 (39%), Gaps = 11/201 (5%)
Query: 9 EGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKDKEKPESAG 68
EG + + E + + K E E ++ G E G+R +E + K++
Sbjct: 50 EGKKERESERKKERREREKRKRE----REKERKRERGKKEKKGERKKEERERKKRRREKE 105
Query: 69 KAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESEGEPESETRAAGKR 128
+GE K +RK K + + G ++ ER + E + E ERE + E + R K+
Sbjct: 106 NKEGEEKEKRKKKEKKERGRTSKEGKERERKEERKREERKERERKKEEREKERERKERKK 165
Query: 129 PAEDDIPRKAKRKTNKGLAQYLKQYKEAIHDMNFSNEDMIREFDNMARVEDKRRKSKQKL 188
+ K + + K + K+ + RE + +++R+K +QK
Sbjct: 166 RERKQVGEKEEERKEKERKERKKRERNRKERKKERERKERRERKKERKKKEERKKERQKD 225
Query: 189 GAFLWMQRNLQDPFYPRGPRE 209
W ++ RG RE
Sbjct: 226 RQTNWREKE-------RGKRE 239
Score = 45.8 bits (107), Expect = 3e-05
Identities = 42/154 (27%), Positives = 68/154 (44%), Gaps = 9/154 (5%)
Query: 37 EDKKLENEGNTENTGKRVEEPLKDKEKPESAGKAKGEGKSERK---GKSEMQGGSKTEGK 93
E ++ E E T GK+ E + KE+ E K K E + ERK GK E +G K E +
Sbjct: 37 EIREREREIETRKEGKKERESERKKERRERE-KRKREREKERKRERGKKEKKGERKKEER 95
Query: 94 PERGGRAEGEGEPDSEREPESEGEPESETRAAGKRPAEDDIPRKAKRKTNKGLAQYLKQY 153
+ R E E + E+E + E + R + K E + + KR+ K ++
Sbjct: 96 ERKKRRREKENKEGEEKEKRKKKEKKERGRTS-KEGKERERKEERKREERK----ERERK 150
Query: 154 KEAIHDMNFSNEDMIREFDNMARVEDKRRKSKQK 187
KE E RE + E++R++ ++K
Sbjct: 151 KEEREKERERKERKKRERKQVGEKEEERKEKERK 184
Score = 38.5 bits (88), Expect = 0.005
Identities = 46/184 (25%), Positives = 73/184 (39%), Gaps = 15/184 (8%)
Query: 10 GMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKDKEKPESAGK 69
G S + + E + EGK E + ++ E E K + KEK K
Sbjct: 33 GWQSEIREREREIETRKEGKKERESERKKERREREKRKREREKERKRERGKKEKKGERKK 92
Query: 70 AKGEGKSERKGKSEMQGGSKTEGKPERG---GRAEGEGEPDSEREPESEGE-PESETRAA 125
+ E K R+ K +G K + K + GR EG+ ERE + E + E + R
Sbjct: 93 EERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEGK---ERERKEERKREERKERER 149
Query: 126 GKRPAEDDIPRKAKRKTNKGLAQYLKQY--KEAIHDMNFSNEDMIREFDNMARVEDKRRK 183
K E + RK ++K + KQ KE E RE + R +++ RK
Sbjct: 150 KKEEREKERERKERKKRER------KQVGEKEEERKEKERKERKKRERNRKERKKERERK 203
Query: 184 SKQK 187
+++
Sbjct: 204 ERRE 207
>gi|13540523 nucleosomal binding protein 1 [Homo sapiens]
Length = 282
Score = 50.1 bits (118), Expect = 2e-06
Identities = 36/135 (26%), Positives = 58/135 (42%), Gaps = 18/135 (13%)
Query: 7 ENEGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKDKEKPES 66
+NE + + D E+ GK + +D+K E +G + G E K+KE +
Sbjct: 124 KNEEEDQKEDEEDQNEEKGEAGKED-----KDEKGEEDGKEDKNGNEKGEDAKEKEDGKK 178
Query: 67 A---------GKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEG----EPDSEREPE 113
GK KGE + E + + E G + E E+G + EG+ E + ERE
Sbjct: 179 GEDGKGNGEDGKEKGEDEKEEEDRKETGDGKENEDGKEKGDKKEGKDVKVKEDEKEREDG 238
Query: 114 SEGEPESETRAAGKR 128
E E +E A ++
Sbjct: 239 KEDEGGNEEEAGKEK 253
Score = 45.4 bits (106), Expect = 4e-05
Identities = 36/135 (26%), Positives = 63/135 (46%), Gaps = 20/135 (14%)
Query: 6 NENEGMPSNQGKIDNEEQPPHEGKP--------EVACILEDKKL--ENEGNTENTGKRVE 55
NE +G GK D +E+ +GK E A ED K + +GN E+ ++ E
Sbjct: 138 NEEKG---EAGKEDKDEKGEEDGKEDKNGNEKGEDAKEKEDGKKGEDGKGNGEDGKEKGE 194
Query: 56 EPLKDKEKPESA-------GKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDS 108
+ +++++ E+ GK KG+ K + K + + +GK + GG E G+
Sbjct: 195 DEKEEEDRKETGDGKENEDGKEKGDKKEGKDVKVKEDEKEREDGKEDEGGNEEEAGKEKE 254
Query: 109 EREPESEGEPESETR 123
+ + E EG+ E E +
Sbjct: 255 DLKEEEEGKEEDEIK 269
Score = 40.4 bits (93), Expect = 0.001
Identities = 43/188 (22%), Positives = 81/188 (43%), Gaps = 17/188 (9%)
Query: 6 NENEGMPSNQGKIDNEEQPPHEGKPEVACIL----EDKKLENEGNTENTGKRVEEPLKDK 61
+E E + + I++ + E K VA + ED+K + E E G+ +E KD
Sbjct: 93 SEKEIVEVKEENIEDATEKGGEKKEAVAAEVKNEEEDQKEDEEDQNEEKGEAGKED-KD- 150
Query: 62 EKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESEGEPESE 121
EK E GK G + + E + G K G+ +G +G+ + + E+E E E
Sbjct: 151 EKGEEDGKEDKNGNEKGEDAKEKEDGKK--GEDGKGNGEDGKEKGEDEKEEEDRKE---- 204
Query: 122 TRAAGKRPAEDDIPRKAKRKTNKG--LAQYLKQYKEAIHDMNFSNEDMIREFDNMARVED 179
G +D K +K K + + K+ ++ D + E+ +E +++ E+
Sbjct: 205 ---TGDGKENEDGKEKGDKKEGKDVKVKEDEKEREDGKEDEGGNEEEAGKEKEDLKEEEE 261
Query: 180 KRRKSKQK 187
+ + + K
Sbjct: 262 GKEEDEIK 269
Score = 36.2 bits (82), Expect = 0.024
Identities = 25/84 (29%), Positives = 42/84 (50%), Gaps = 2/84 (2%)
Query: 37 EDKKLENEGNTENTGKRVEEPLKDKEKPESAGKAKGEGKSERKGKSEMQGGSKTE-GKPE 95
ED+K E + GK E+ + +K E E + ER+ E +GG++ E GK +
Sbjct: 194 EDEKEEEDRKETGDGKENEDGKEKGDKKEGKDVKVKEDEKEREDGKEDEGGNEEEAGKEK 253
Query: 96 RGGRAEGEGEPDSEREPESEGEPE 119
+ E EG+ + E + E +G+ E
Sbjct: 254 EDLKEEEEGKEEDEIK-EDDGKKE 276
Score = 27.7 bits (60), Expect = 8.4
Identities = 25/79 (31%), Positives = 36/79 (45%), Gaps = 9/79 (11%)
Query: 7 ENEGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKDKEKPES 66
ENE K + ++ E + E ED K + GN E GK E+ LK++E+
Sbjct: 210 ENEDGKEKGDKKEGKDVKVKEDEKE----REDGKEDEGGNEEEAGKEKED-LKEEEE--- 261
Query: 67 AGKAKGEGKSERKGKSEMQ 85
GK + E K + K E Q
Sbjct: 262 -GKEEDEIKEDDGKKEEPQ 279
>gi|239508778 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 123
Score = 48.9 bits (115), Expect = 4e-06
Identities = 31/105 (29%), Positives = 50/105 (47%), Gaps = 2/105 (1%)
Query: 42 ENEGNTENTGKRVEEPLKDKEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAE 101
E E E GKR E+ + +++ E K K K + K + E + K + K E R E
Sbjct: 18 ETEEEEEKEGKRKEKRKEKRKEKEKKKKTKETEKRKEKEEEEKKRKRKRKKKKEEEEREE 77
Query: 102 GEGEPDSEREPES--EGEPESETRAAGKRPAEDDIPRKAKRKTNK 144
E E + E+E E EG + + ++ E++ +K +RKT K
Sbjct: 78 EEEEEEEEKEEEEKEEGRRRKKKKKRRRKEEEEEKKKKRRRKTKK 122
Score = 35.0 bits (79), Expect = 0.053
Identities = 24/113 (21%), Positives = 53/113 (46%), Gaps = 6/113 (5%)
Query: 75 KSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESEGEPESETRAAGKRPAEDDI 134
K ++K E + +TE + E+ G+ + + +E E E + +T+ KR +++
Sbjct: 4 KKKKKETEETEETEETEEEEEKEGKRK-----EKRKEKRKEKEKKKKTKETEKRKEKEEE 58
Query: 135 PRKAKRKTNKGLAQYLKQYKEAIHDMNFSNEDMIREFDNMARVEDKRRKSKQK 187
+K KRK K + ++ +E + E+ E + + +RRK +++
Sbjct: 59 EKKRKRKRKKKKEEEEREEEEEEEEEEKEEEEK-EEGRRRKKKKKRRRKEEEE 110
>gi|239747134 PREDICTED: hypothetical protein XP_002343921 [Homo
sapiens]
Length = 600
Score = 48.1 bits (113), Expect = 6e-06
Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 2/150 (1%)
Query: 38 DKKLENEGNTENTGKRVEEPLKDKEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERG 97
+++ +E TE +R E +D+++ + + E +++RK + + +TE K ER
Sbjct: 247 ERERASERETERDKERERE--RDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQ 304
Query: 98 GRAEGEGEPDSEREPESEGEPESETRAAGKRPAEDDIPRKAKRKTNKGLAQYLKQYKEAI 157
E E E + +RE E E E E E + +R E + RK KR+T + + +E
Sbjct: 305 RERERERERNRKRERERERERERERQRETERDREKERERKRKRQTEMDRERNRQTGREGR 364
Query: 158 HDMNFSNEDMIREFDNMARVEDKRRKSKQK 187
E AR ++R + + +
Sbjct: 365 RQAERERERERERDRQSAREREERERDRDR 394
Score = 42.7 bits (99), Expect = 3e-04
Identities = 42/160 (26%), Positives = 72/160 (45%), Gaps = 11/160 (6%)
Query: 38 DKKLENEG----NTENTGKRVEEPLKDKEKP-ESAGKAKGEGKSERKGKSEMQGGSKTEG 92
+++ E EG + + G+R E +D EK E + + ++ER + E + +
Sbjct: 128 ERETEREGERGRDRQTDGQRERERQRDAEKERERQTDRERQRQTERNRQKEREREKNRQE 187
Query: 93 KPERGGRAEGEGEPD---SEREPESEGEPESETRAAGKRPA--EDDIPRKAKRKTNKGLA 147
+ ER + E E + + SER E E E E+ET KR E D RK +R+ K
Sbjct: 188 RRERERQREKENKTEDRHSERGRERERERETETETERKRQTDRERDRQRKTEREREKQAE 247
Query: 148 QYLKQYKEAIHDMNFSNEDMIREFDNMARVEDKRRKSKQK 187
+ +E D E R+ D R +++ R++ +K
Sbjct: 248 RERASERETERDKERERE-RDRDRDRDRRQKERERQTDRK 286
Score = 42.4 bits (98), Expect = 3e-04
Identities = 33/152 (21%), Positives = 69/152 (45%), Gaps = 3/152 (1%)
Query: 39 KKLENEGNTENTGKRVEEPLKDKEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGG 98
K+ E E N + +R + K+ + + + E + ER+ ++E + +T+ + +R
Sbjct: 177 KEREREKNRQERRERERQREKENKTEDRHSERGRERERERETETETERKRQTDRERDRQR 236
Query: 99 RAEGEGEPDSEREPESEGEPESETRAAGKRPAEDDIPRKAK---RKTNKGLAQYLKQYKE 155
+ E E E +ERE SE E E + +R + D R+ K R+T++ + ++ +E
Sbjct: 237 KTEREREKQAERERASERETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTERDRE 296
Query: 156 AIHDMNFSNEDMIREFDNMARVEDKRRKSKQK 187
E N R ++ R+ +++
Sbjct: 297 TERKRERQRERERERERNRKRERERERERERE 328
Score = 40.8 bits (94), Expect = 0.001
Identities = 32/152 (21%), Positives = 71/152 (46%), Gaps = 3/152 (1%)
Query: 38 DKKLENEGNTENTGKRVE--EPLKDKEKP-ESAGKAKGEGKSERKGKSEMQGGSKTEGKP 94
D+K E + KR E +D+EK E + + + E++ + + +TE +
Sbjct: 76 DRKRERRREKDRHRKRDRHRERQRDREKERERQTDRERDRQREKERNRQKERERETEREG 135
Query: 95 ERGGRAEGEGEPDSEREPESEGEPESETRAAGKRPAEDDIPRKAKRKTNKGLAQYLKQYK 154
ERG + +G+ + ER+ ++E E E +T +R E + ++ +R+ N+ + ++ +
Sbjct: 136 ERGRDRQTDGQRERERQRDAEKERERQTDRERQRQTERNRQKEREREKNRQERRERERQR 195
Query: 155 EAIHDMNFSNEDMIREFDNMARVEDKRRKSKQ 186
E + + + RE + E + + +Q
Sbjct: 196 EKENKTEDRHSERGRERERERETETETERKRQ 227
Score = 38.9 bits (89), Expect = 0.004
Identities = 43/206 (20%), Positives = 83/206 (40%), Gaps = 23/206 (11%)
Query: 7 ENEGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKDKEKPES 66
E E + Q + + E Q E K E ++ E E TE +R + +++++
Sbjct: 178 EREREKNRQERRERERQREKENKTEDRHSERGRERERERETETETERKRQTDRERDRQRK 237
Query: 67 AGKAKGEGKSERKGKSEMQGGSKTEGKPERGG---------------------RAEGEGE 105
+ + E ++ER+ SE + E + ER R E + E
Sbjct: 238 TERER-EKQAERERASERETERDKERERERDRDRDRDRRQKERERQTDRKRQRRTERDRE 296
Query: 106 PDSEREPESEGEPESETRAAGKRPAEDDIPRKAKRKTNKGLAQYLKQYKEAIHDMNFS-N 164
+ +RE + E E E E +R E + R+ +R+T + + ++ ++ +M+ N
Sbjct: 297 TERKRERQRERERERERNRKRERERERERERERQRETERDREKERERKRKRQTEMDRERN 356
Query: 165 EDMIREFDNMARVEDKRRKSKQKLGA 190
RE A E +R + + + A
Sbjct: 357 RQTGREGRRQAERERERERERDRQSA 382
Score = 37.4 bits (85), Expect = 0.011
Identities = 32/151 (21%), Positives = 67/151 (44%), Gaps = 11/151 (7%)
Query: 38 DKKLENEGNTENTGKRVEEPLKDKEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERG 97
+++ E E E E K + + E K + ER+ E + +T+ + +R
Sbjct: 57 NRQKERERRREKRQTERETDRKRERRREKDRHRKRDRHRERQRDREKERERQTDRERDRQ 116
Query: 98 GRAEGEGEPDSEREPESEGEPESETRAAGKRPAE--DDIPRKAKRKTNKGLAQYLKQYKE 155
E + + ERE E EGE + + G+R E D ++ +R+T++ + ++ ++
Sbjct: 117 REKERNRQKERERETEREGERGRDRQTDGQRERERQRDAEKERERQTDRERQRQTERNRQ 176
Query: 156 AIHDMNFSNEDMIREFDNMARVEDKRRKSKQ 186
++ RE + R E +R++ K+
Sbjct: 177 ---------KEREREKNRQERRERERQREKE 198
Score = 37.4 bits (85), Expect = 0.011
Identities = 30/153 (19%), Positives = 69/153 (45%), Gaps = 8/153 (5%)
Query: 38 DKKLENEGNTENTGKRVEEPLKDKEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERG 97
D + E E T+ +R E + KE+ + + + ER+ + E + +KTE +
Sbjct: 154 DAEKERERQTDRERQRQTERNRQKEREREKNRQE---RRERERQREKE--NKTEDRHSER 208
Query: 98 GRA---EGEGEPDSEREPESEGEPESETRAAGKRPAEDDIPRKAKRKTNKGLAQYLKQYK 154
GR E E E ++ER+ +++ E + + + +R + + R ++R+T + + ++ +
Sbjct: 209 GRERERERETETETERKRQTDRERDRQRKTEREREKQAERERASERETERDKERERERDR 268
Query: 155 EAIHDMNFSNEDMIREFDNMARVEDKRRKSKQK 187
+ D + + R E R +++
Sbjct: 269 DRDRDRRQKERERQTDRKRQRRTERDRETERKR 301
Score = 37.0 bits (84), Expect = 0.014
Identities = 32/156 (20%), Positives = 72/156 (46%), Gaps = 8/156 (5%)
Query: 38 DKKLENEGNTENTGKRVEEPLKDKEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERG 97
DK+ E E + + R ++ + + + + + + ++ERK + + + + E +R
Sbjct: 259 DKERERERDRDRDRDRRQKERERQTDRKRQRRTERDRETERKRERQRERERERERNRKRE 318
Query: 98 GRAEGEGEPDSEREPESEGEPESETRAAGKRPAEDDIPRKAKRKTNKGLAQYLKQYKEAI 157
E E E + +RE E + E E E KR + ++ R+ R+T + + ++ +E
Sbjct: 319 RERERERERERQRETERDREKERER----KRKRQTEMDRERNRQTGREGRRQAERERERE 374
Query: 158 HDMNFSN----EDMIREFDNMARVEDKRRKSKQKLG 189
+ + + E+ R+ D + E +R+ K + G
Sbjct: 375 RERDRQSAREREERERDRDRDRQKERERQTEKDRDG 410
Score = 33.1 bits (74), Expect = 0.20
Identities = 23/111 (20%), Positives = 48/111 (43%), Gaps = 4/111 (3%)
Query: 42 ENEGNTENTGKRVEEPLKDKEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAE 101
E T G+R E +++E+ A+ + ER + Q + + + +R +
Sbjct: 354 ERNRQTGREGRRQAERERERERERDRQSAREREERERDRDRDRQKERERQTEKDR----D 409
Query: 102 GEGEPDSEREPESEGEPESETRAAGKRPAEDDIPRKAKRKTNKGLAQYLKQ 152
G+ E + +RE E + E E +R + R +R+T++ + K+
Sbjct: 410 GQRETEKQREREKDRESERGRERGREREKQKGRERDRERQTDRQAGRQRKR 460
Score = 31.6 bits (70), Expect = 0.58
Identities = 30/139 (21%), Positives = 58/139 (41%), Gaps = 3/139 (2%)
Query: 7 ENEGMPSNQGKIDNEEQPPHEGKPEVACILE-DKKLENEGNTENTGKRVEEPLKDKEKPE 65
E E + + D E++ + K + E +++ EG + +R E +D++
Sbjct: 324 ERERERQRETERDREKERERKRKRQTEMDRERNRQTGREGRRQAERERERERERDRQSAR 383
Query: 66 SAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESEGEPESETRAA 125
+ + + +R+ + E Q +G+ E + E E + +SER E E E +
Sbjct: 384 EREERERDRDRDRQKERERQTEKDRDGQRETEKQREREKDRESERGRERGREREKQKGRE 443
Query: 126 GKRPAEDD--IPRKAKRKT 142
R + D R+ KR T
Sbjct: 444 RDRERQTDRQAGRQRKRST 462
>gi|55749466 transcription elongation factor A (SII)-like 8 [Homo
sapiens]
Length = 117
Score = 48.1 bits (113), Expect = 6e-06
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 10/116 (8%)
Query: 89 KTEGKPERGGRAEGEGEPDSEREPESEGEPESETRAAGKRPAEDDIPRKAKRKTNKGLAQ 148
+ EGKP+ +AE E P + E+EG P+ P+E+ + ++A+ G Q
Sbjct: 7 ENEGKPQNMPKAE-EDRPLEDVPQEAEGNPQ---------PSEEGVSQEAEGNPRGGPNQ 56
Query: 149 YLKQYKEAIHDMNFSNEDMIREFDNMARVEDKRRKSKQKLGAFLWMQRNLQDPFYP 204
+ +KE + E+MIR D + R+ ++ R+ + K W QR+ + YP
Sbjct: 57 PGQGFKEDTPVRHLDPEEMIRGVDELERLREEIRRVRNKFVMMHWKQRHSRSRPYP 112
Score = 29.3 bits (64), Expect = 2.9
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 14/77 (18%)
Query: 1 MEKLFNENEGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKD 60
M+K ENEG P N K + E++P LED E EGN + + + V + +
Sbjct: 1 MQKSCEENEGKPQNMPKAE-EDRP-----------LEDVPQEAEGNPQPSEEGVSQ--EA 46
Query: 61 KEKPESAGKAKGEGKSE 77
+ P G+G E
Sbjct: 47 EGNPRGGPNQPGQGFKE 63
>gi|23503247 transcription elongation factor A (SII)-like 8 [Homo
sapiens]
Length = 117
Score = 48.1 bits (113), Expect = 6e-06
Identities = 32/116 (27%), Positives = 56/116 (48%), Gaps = 10/116 (8%)
Query: 89 KTEGKPERGGRAEGEGEPDSEREPESEGEPESETRAAGKRPAEDDIPRKAKRKTNKGLAQ 148
+ EGKP+ +AE E P + E+EG P+ P+E+ + ++A+ G Q
Sbjct: 7 ENEGKPQNMPKAE-EDRPLEDVPQEAEGNPQ---------PSEEGVSQEAEGNPRGGPNQ 56
Query: 149 YLKQYKEAIHDMNFSNEDMIREFDNMARVEDKRRKSKQKLGAFLWMQRNLQDPFYP 204
+ +KE + E+MIR D + R+ ++ R+ + K W QR+ + YP
Sbjct: 57 PGQGFKEDTPVRHLDPEEMIRGVDELERLREEIRRVRNKFVMMHWKQRHSRSRPYP 112
Score = 29.3 bits (64), Expect = 2.9
Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 14/77 (18%)
Query: 1 MEKLFNENEGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKD 60
M+K ENEG P N K + E++P LED E EGN + + + V + +
Sbjct: 1 MQKSCEENEGKPQNMPKAE-EDRP-----------LEDVPQEAEGNPQPSEEGVSQ--EA 46
Query: 61 KEKPESAGKAKGEGKSE 77
+ P G+G E
Sbjct: 47 EGNPRGGPNQPGQGFKE 63
>gi|151101407 prothymosin, alpha isoform 1 [Homo sapiens]
Length = 111
Score = 47.0 bits (110), Expect = 1e-05
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 46 NTENTGKRVEEPLKDKEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGE 105
++E T K ++E + E+ E+ A G +E + E + ++ + + E GG E E E
Sbjct: 9 SSEITTKDLKEKKEVVEEAENGRDAPANGNAENEENGEQEADNEVDEEEEEGGEEE-EEE 67
Query: 106 PDSEREPESEGEPESETRAAGKRPAEDD 133
+ + E E E E A GKR AEDD
Sbjct: 68 EEGDGEEEDGDEDEEAESATGKRAAEDD 95
>gi|4759128 solute carrier family 24 (sodium/potassium/calcium
exchanger), member 1 [Homo sapiens]
Length = 1099
Score = 47.0 bits (110), Expect = 1e-05
Identities = 38/147 (25%), Positives = 59/147 (40%), Gaps = 12/147 (8%)
Query: 7 ENEGMPSNQGKIDNEEQPPHEGKPEV-----ACILEDK---KLENEGNTENTGKRVEEPL 58
E G + K E QP EG+ E C E++ K +NEG E + +
Sbjct: 762 ETAGEGETEEKSGGETQPEGEGETETQGKGEECEDENEAEGKGDNEGEDEGEIHAEDGEM 821
Query: 59 K----DKEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPES 114
K + E E + + GE K++ KG + G + + E E E E + E + E
Sbjct: 822 KGNEGETESQELSAENHGEAKNDEKGVEDGGGSDGGDSEEEEEEEEEQEEEEEEEEQEEE 881
Query: 115 EGEPESETRAAGKRPAEDDIPRKAKRK 141
E E E E + P D P +++
Sbjct: 882 EEEEEEEEEKGNEEPLSLDWPETRQKQ 908
Score = 42.4 bits (98), Expect = 3e-04
Identities = 31/119 (26%), Positives = 45/119 (37%), Gaps = 15/119 (12%)
Query: 42 ENEGNTENTGKRVEEPLKDKEKPESAGKAK---------------GEGKSERKGKSEMQG 86
E E + N G R + K + KPE AK G+ K G+ ++
Sbjct: 690 EKEEESLNQGARAQPQAKAESKPEEEEPAKLPAVTVTPAPVPDIKGDQKENPGGQEDVAE 749
Query: 87 GSKTEGKPERGGRAEGEGEPDSEREPESEGEPESETRAAGKRPAEDDIPRKAKRKTNKG 145
T P G GEGE + + E++ E E ET GK +D + N+G
Sbjct: 750 AESTGEMPGEEGETAGEGETEEKSGGETQPEGEGETETQGKGEECEDENEAEGKGDNEG 808
Score = 40.8 bits (94), Expect = 0.001
Identities = 37/130 (28%), Positives = 54/130 (41%), Gaps = 11/130 (8%)
Query: 7 ENEGMPSNQGKIDN-------EEQPPHEGKPEVACILEDKKLE-NEGNTENTGKRVE--- 55
E EG QGK + E + +EG+ E ED +++ NEG TE+ E
Sbjct: 780 EGEGETETQGKGEECEDENEAEGKGDNEGEDEGEIHAEDGEMKGNEGETESQELSAENHG 839
Query: 56 EPLKDKEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESE 115
E D++ E G + G E + + E Q + E + E E E E EP S
Sbjct: 840 EAKNDEKGVEDGGGSDGGDSEEEEEEEEEQEEEEEEEEQEEEEEEEEEEEEKGNEEPLSL 899
Query: 116 GEPESETRAA 125
PE+ + A
Sbjct: 900 DWPETRQKQA 909
Score = 36.2 bits (82), Expect = 0.024
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 44 EGNTENTGKRVEEPLKDKEKPESAGKAKGEGKSER-------KGKSEMQGGSKTEGKPER 96
EG T G+ EE + +PE G+ + +GK E +GK + +G + E E
Sbjct: 760 EGETAGEGE-TEEKSGGETQPEGEGETETQGKGEECEDENEAEGKGDNEGEDEGEIHAED 818
Query: 97 GGRAEGEGEPDS-EREPESEGEPESETR 123
G EGE +S E E+ GE +++ +
Sbjct: 819 GEMKGNEGETESQELSAENHGEAKNDEK 846
>gi|117306167 proline-rich protein BstNI subfamily 3 precursor [Homo
sapiens]
Length = 309
Score = 47.0 bits (110), Expect = 1e-05
Identities = 39/129 (30%), Positives = 54/129 (41%), Gaps = 23/129 (17%)
Query: 9 EGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKDKEKPESA- 67
EG P QG ++ PP GKPE G G + + P KPE
Sbjct: 58 EGRPP-QGGNQSQGPPPRPGKPE-------------GPPPQGGNQSQGPPPRPGKPEGQP 103
Query: 68 --GKAKGEGKSERKGKSE---MQGGSKTEGKPERGGRAEG---EGEPDSEREPESEGEPE 119
G + +G R GK E QGG++++G P R G+ EG +G S+ P G+PE
Sbjct: 104 PQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRPGKPE 163
Query: 120 SETRAAGKR 128
G +
Sbjct: 164 GPPPQGGNQ 172
Score = 45.1 bits (105), Expect = 5e-05
Identities = 39/138 (28%), Positives = 55/138 (39%), Gaps = 30/138 (21%)
Query: 6 NENEGMPSNQGKID-------NEEQ--PPHEGKPEVACILEDKKLENEGNTENTGKRVEE 56
N+++G P GK + N+ Q PPH GKP EG G + +
Sbjct: 150 NQSQGPPPRPGKPEGPPPQGGNQSQGPPPHPGKP-------------EGPPPQGGNQSQG 196
Query: 57 PLKDKEKPES---AGKAKGEGKSERKGKSE---MQGGSKTEGKPERGGRAEG--EGEPDS 108
P KPE G + +G R GK E QGG+K +G P G+ +G E +
Sbjct: 197 PPPRPGKPEGPPPQGGNQSQGPPPRPGKPEGPPSQGGNKPQGPPPHPGKPQGPPPQEGNK 256
Query: 109 EREPESEGEPESETRAAG 126
+ P G P+ G
Sbjct: 257 PQRPPPPGRPQGPPPPGG 274
Score = 40.0 bits (92), Expect = 0.002
Identities = 31/105 (29%), Positives = 46/105 (43%), Gaps = 10/105 (9%)
Query: 44 EGNTENTGKRVEEPLKDKEKPESA---GKAKGEGKSERKGKSE---MQGGSKTEGKPERG 97
EG G + + KPE G + +G R GK E QGG++++G P R
Sbjct: 37 EGRRPQGGNQPQRTPPPPGKPEGRPPQGGNQSQGPPPRPGKPEGPPPQGGNQSQGPPPRP 96
Query: 98 GRAEG---EGEPDSEREPESEGEPESETRAAGKRPAEDDIPRKAK 139
G+ EG +G S+ P G+PE G + ++ PR K
Sbjct: 97 GKPEGQPPQGGNQSQGPPPRPGKPEGPPPQGGNQ-SQGPPPRPGK 140
>gi|32483416 neurofilament, heavy polypeptide 200kDa [Homo sapiens]
Length = 1020
Score = 45.1 bits (105), Expect = 5e-05
Identities = 39/143 (27%), Positives = 60/143 (41%), Gaps = 19/143 (13%)
Query: 5 FNENEGMP-----SNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLK 59
F+ EG+P S K+ +EE+ K E ++ +++ E TE + E+ K
Sbjct: 420 FSLPEGLPKIPSVSTHIKVKSEEKIKVVEKSEKETVIVEEQTEETQVTEEVTEEEEKEAK 479
Query: 60 DKEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKP---ERGGRAEGEGEPDSEREPESEG 116
++E GK E G+ E G + E K E E E + + E +S
Sbjct: 480 EEE-----------GKEEEGGEEEEAEGGEEETKSPPAEEAASPEKEAKSPVKEEAKSPA 528
Query: 117 EPESETRAAGKRPAEDDIPRKAK 139
E +S + K PAE P KAK
Sbjct: 529 EAKSPEKEEAKSPAEVKSPEKAK 551
Score = 41.2 bits (95), Expect = 7e-04
Identities = 37/145 (25%), Positives = 61/145 (42%), Gaps = 14/145 (9%)
Query: 7 ENEGMPSNQGK--IDNEEQPPHEGKPEVACILEDKKLENEGNTE-NTGKRVEEPLKDKEK 63
E P + K + E + P E K +K E + E + ++ + P K++ K
Sbjct: 507 EEAASPEKEAKSPVKEEAKSPAEAK-------SPEKEEAKSPAEVKSPEKAKSPAKEEAK 559
Query: 64 --PESAGKAKGEGKS--ERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESEGEPE 119
PE+ K E KS E K + + +K E K ++ + + + E +S E +
Sbjct: 560 SPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAK 619
Query: 120 SETRAAGKRPAEDDIPRKAKRKTNK 144
S + K PAE P KAK T +
Sbjct: 620 SPVKEEAKSPAEVKSPEKAKSPTKE 644
Score = 40.4 bits (93), Expect = 0.001
Identities = 29/117 (24%), Positives = 51/117 (43%), Gaps = 1/117 (0%)
Query: 27 EGKPEVACILEDKKLENEGNTENTGKRVEEPLKDKEKPESAGKAKGEGKSERKGKSEMQG 86
EG P++ + K+++E + K +E + +E+ E + + E K E +G
Sbjct: 424 EGLPKIPSVSTHIKVKSEEKIKVVEKSEKETVIVEEQTEETQVTEEVTEEEEKEAKEEEG 483
Query: 87 GSKTEGKPERGGRAEGEGE-PDSEREPESEGEPESETRAAGKRPAEDDIPRKAKRKT 142
+ G+ E E E + P +E E E +S + K PAE P K + K+
Sbjct: 484 KEEEGGEEEEAEGGEEETKSPPAEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAKS 540
Score = 38.5 bits (88), Expect = 0.005
Identities = 42/168 (25%), Positives = 67/168 (39%), Gaps = 18/168 (10%)
Query: 27 EGKPEVACILEDKKLENEGNTENTGKRVEEPLKDKEKPESAGKAKGEGKSERKGKS--EM 84
E KP+ + E K E T K E+ KD +K E+ K + K E K + E
Sbjct: 827 EEKPQEVKVKEPPKKAEEEKAPATPKTEEK--KDSKKEEAPKKEAPKPKVEEKKEPAVEK 884
Query: 85 QGGSKTEGKPERGGRAEGEGEPDSER----EPESEGEPESETRAAGKRPAEDDIPRKAKR 140
SK E K E + P+ E E + + +P+ +T A K P DD K
Sbjct: 885 PKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAKKEP--DDAKAKEPS 942
Query: 141 KTNKGLAQYLKQYKEAIHDMNFSNEDMIREFDNMARVEDKRRKSKQKL 188
K + KEA + + E+ ++ + + E K ++ + L
Sbjct: 943 KP--------AEKKEAAPEKKDTKEEKAKKPEEKPKTEAKAKEDDKTL 982
Score = 37.0 bits (84), Expect = 0.014
Identities = 32/116 (27%), Positives = 51/116 (43%), Gaps = 11/116 (9%)
Query: 37 EDKKLENEGNTENTGKRVEEPLKDKEKPESAG---KAKGEGKSERKGKSEMQGGSKTEGK 93
E++ E EG E + EE K E+A +AK K E K +E + K E K
Sbjct: 480 EEEGKEEEGGEEEEAEGGEEETKSPPAEEAASPEKEAKSPVKEEAKSPAEAKSPEKEEAK 539
Query: 94 -------PERGGRAEGEGEPDSEREPESEGEPESETRAAGKRPAEDDIPRKAKRKT 142
PE+ ++ + E S E +S + E+++ A K P + P K + K+
Sbjct: 540 SPAEVKSPEKA-KSPAKEEAKSPPEAKSPEKEEAKSPAEVKSPEKAKSPAKEEAKS 594
Score = 35.4 bits (80), Expect = 0.040
Identities = 30/113 (26%), Positives = 52/113 (46%), Gaps = 16/113 (14%)
Query: 52 KRVEEPLKDKEKPESA-----GKAKGEGKSERKGKSEMQGGSKTEGKPERGG---RAEGE 103
+ V+ P+K++EKP+ K E K+ K+E + SK E P++ + E +
Sbjct: 818 EEVKSPVKEEEKPQEVKVKEPPKKAEEEKAPATPKTEEKKDSKKEEAPKKEAPKPKVEEK 877
Query: 104 GEPDSEREPESEGEPESETRAAGKR--------PAEDDIPRKAKRKTNKGLAQ 148
EP E+ ES+ E + E K+ PA+ ++ AK K +A+
Sbjct: 878 KEPAVEKPKESKVEAKKEEAEDKKKVPTPEKEAPAKVEVKEDAKPKEKTEVAK 930
Score = 35.0 bits (79), Expect = 0.053
Identities = 31/124 (25%), Positives = 51/124 (41%), Gaps = 10/124 (8%)
Query: 18 IDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKDKEKPESAGKAKGEGKSE 77
+ E + P E K V E+ K E + K KE+ +S KAK K E
Sbjct: 608 VKEEAKSPAEAKSPVK---EEAKSPAEVKSPEKAKS-----PTKEEAKSPEKAKSPEKEE 659
Query: 78 RKGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESEGEPESETRAAGKRPAEDDI--P 135
K + + K E K ++ + E S + +S + E+++ K P +++ P
Sbjct: 660 AKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEEAKSP 719
Query: 136 RKAK 139
KAK
Sbjct: 720 EKAK 723
Score = 34.7 bits (78), Expect = 0.069
Identities = 21/85 (24%), Positives = 38/85 (44%)
Query: 58 LKDKEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESEGE 117
+K EK +S K + + +E K + + K E K ++ + E S E +S +
Sbjct: 578 VKSPEKAKSPAKEEAKSPAEAKSPEKAKSPVKEEAKSPAEAKSPVKEEAKSPAEVKSPEK 637
Query: 118 PESETRAAGKRPAEDDIPRKAKRKT 142
+S T+ K P + P K + K+
Sbjct: 638 AKSPTKEEAKSPEKAKSPEKEEAKS 662
Score = 34.7 bits (78), Expect = 0.069
Identities = 22/82 (26%), Positives = 40/82 (48%), Gaps = 2/82 (2%)
Query: 60 DKEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESEGEPE 119
+KE+ +S KAK K+E K + + K E K ++ + E S + +S + E
Sbjct: 656 EKEEAKSPEKAKSPVKAEAKSPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEKAKSPVKEE 715
Query: 120 SETRAAGKRPAEDD--IPRKAK 139
+++ K P +++ P KAK
Sbjct: 716 AKSPEKAKSPVKEEAKTPEKAK 737
Score = 34.3 bits (77), Expect = 0.090
Identities = 26/104 (25%), Positives = 47/104 (45%), Gaps = 4/104 (3%)
Query: 38 DKKLENEGNTENTGKRVEEPLKDKEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERG 97
+K E + ++ + P+K + K S KAK K+E K + + K E K
Sbjct: 650 EKAKSPEKEEAKSPEKAKSPVKAEAK--SPEKAKSPVKAEAKSPEKAKSPVKEEAKSPEK 707
Query: 98 GRAEGEGEPDSEREPESEGEPESETRAAGKRPAEDDI--PRKAK 139
++ + E S + +S + E++T K P +++ P KAK
Sbjct: 708 AKSPVKEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAK 751
Score = 32.3 bits (72), Expect = 0.34
Identities = 30/110 (27%), Positives = 50/110 (45%), Gaps = 12/110 (10%)
Query: 17 KIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEE----PLKDKEKPESAGKAKG 72
K++ +E + K EVA KK ++ + K E+ P K K E A K +
Sbjct: 913 KVEVKEDAKPKEKTEVA-----KKEPDDAKAKEPSKPAEKKEAAPEKKDTKEEKAKKPEE 967
Query: 73 EGKSERKGKSEMQGGSKTEGKP--ERGGRAEGEGEPDSEREPESEGEPES 120
+ K+E K K + + SK KP E+ ++ + DS + PE E ++
Sbjct: 968 KPKTEAKAKEDDKTLSKEPSKPKAEKAEKSSSTDQKDS-KPPEKATEDKA 1016
Score = 32.0 bits (71), Expect = 0.45
Identities = 27/128 (21%), Positives = 55/128 (42%), Gaps = 5/128 (3%)
Query: 61 KEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESEGEPES 120
KE+ +S KAK K E K + + K E K ++ + + + PE++ +
Sbjct: 713 KEEAKSPEKAKSPVKEEAKTPEKAKSPVKEEAKSPEKAKSPEKAKTLDVKSPEAKTPAKE 772
Query: 121 ETRAAGKRPAEDDIPRKAKRKTNKGLAQYLKQYKEAIHDMNFSNEDMIREFDNMARVEDK 180
E R+ PA D P KAK + + K D +++ ++ + + V+++
Sbjct: 773 EARS----PA-DKFPEKAKSPVKEEVKSPEKAKSPLKEDAKAPEKEIPKKEEVKSPVKEE 827
Query: 181 RRKSKQKL 188
+ + K+
Sbjct: 828 EKPQEVKV 835
>gi|47578107 delangin isoform B [Homo sapiens]
Length = 2697
Score = 45.1 bits (105), Expect = 5e-05
Identities = 40/191 (20%), Positives = 82/191 (42%), Gaps = 19/191 (9%)
Query: 7 ENEGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKDKEKPES 66
+NE + + ++ P + + ++ + +N G +E T R E P + E
Sbjct: 653 QNESRTTECKQNESTIVEPKQNENRLSDTKPNDNKQNNGRSETTKSRPETPKQKGESRPE 712
Query: 67 AGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESEGEPES-----E 121
K K +G E + K +G+PE + +GE P++ ++ ++EG PE+ +
Sbjct: 713 TPKQKSDGHPETPKQ-------KGDGRPET-PKQKGESRPETPKQ-KNEGRPETPKHRHD 763
Query: 122 TRAAGKRPAEDDIPRKAKRK--TNKGLAQYLKQYKEAIH---DMNFSNEDMIREFDNMAR 176
R +P+ + P +K K T + + EA+ D +E + R+ DN +
Sbjct: 764 NRRDSGKPSTEKKPEVSKHKQDTKSDSPRLKSERAEALKQRPDGRSVSESLRRDHDNKQK 823
Query: 177 VEDKRRKSKQK 187
+D+ + +
Sbjct: 824 SDDRGESERHR 834
Score = 37.4 bits (85), Expect = 0.011
Identities = 35/159 (22%), Positives = 66/159 (41%), Gaps = 15/159 (9%)
Query: 7 ENEGMPSN-QGKIDNEE---QPPHEGKPEVACILEDKKLENEG---------NTENTGKR 53
+NEG P + + DN +P E KPEV+ +D K ++ G+
Sbjct: 750 KNEGRPETPKHRHDNRRDSGKPSTEKKPEVSKHKQDTKSDSPRLKSERAEALKQRPDGRS 809
Query: 54 VEEPLKDKEKPESAGKAKGEGKSERKGKSEMQGGS--KTEGKPERGGRAEGEGEPDSERE 111
V E L+ + +GE + R +S ++ ++ + E G +++ ER+
Sbjct: 810 VSESLRRDHDNKQKSDDRGESERHRGDQSRVRRPETLRSSSRNEHGIKSDSSKTDKLERK 869
Query: 112 PESEGEPESETRAAGKRPAEDDIPRKAKRKTNKGLAQYL 150
E E ++G++ + D PR + +NK + L
Sbjct: 870 HRHESGDSRERPSSGEQKSRPDSPRVKQGDSNKSRSDKL 908
Score = 27.7 bits (60), Expect = 8.4
Identities = 34/153 (22%), Positives = 60/153 (39%), Gaps = 29/153 (18%)
Query: 17 KIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKDKEKPESAGKAKGEGKS 76
K++ ++ KP+ A I D+ +++ E++ KR + KD +K E +
Sbjct: 1070 KMNKRKRSTVNEKPKYAEISSDEDNDSDEAFESSRKRHK---KDDDKAWEY-----EERD 1121
Query: 77 ERKGKSEMQGGSKTEG-KPERGGRAEGEGEPDSEREPESEGEPESETRAAGKRPAEDDIP 135
R + G EG + GGR DS+ E S P+ ++
Sbjct: 1122 RRSSGDHRRSGHSHEGRRSSGGGRYRNRSPSDSDMEDYS------------PPPSLSEVA 1169
Query: 136 RKAKRKTNKGLAQYLKQYKEAIHDMNFSNEDMI 168
RK K+K KQ K ++ + E+M+
Sbjct: 1170 RKMKKKE--------KQKKRKAYEPKLTPEEMM 1194
>gi|47578105 delangin isoform A [Homo sapiens]
Length = 2804
Score = 45.1 bits (105), Expect = 5e-05
Identities = 40/191 (20%), Positives = 82/191 (42%), Gaps = 19/191 (9%)
Query: 7 ENEGMPSNQGKIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKDKEKPES 66
+NE + + ++ P + + ++ + +N G +E T R E P + E
Sbjct: 653 QNESRTTECKQNESTIVEPKQNENRLSDTKPNDNKQNNGRSETTKSRPETPKQKGESRPE 712
Query: 67 AGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESEGEPES-----E 121
K K +G E + K +G+PE + +GE P++ ++ ++EG PE+ +
Sbjct: 713 TPKQKSDGHPETPKQ-------KGDGRPET-PKQKGESRPETPKQ-KNEGRPETPKHRHD 763
Query: 122 TRAAGKRPAEDDIPRKAKRK--TNKGLAQYLKQYKEAIH---DMNFSNEDMIREFDNMAR 176
R +P+ + P +K K T + + EA+ D +E + R+ DN +
Sbjct: 764 NRRDSGKPSTEKKPEVSKHKQDTKSDSPRLKSERAEALKQRPDGRSVSESLRRDHDNKQK 823
Query: 177 VEDKRRKSKQK 187
+D+ + +
Sbjct: 824 SDDRGESERHR 834
Score = 37.4 bits (85), Expect = 0.011
Identities = 35/159 (22%), Positives = 66/159 (41%), Gaps = 15/159 (9%)
Query: 7 ENEGMPSN-QGKIDNEE---QPPHEGKPEVACILEDKKLENEG---------NTENTGKR 53
+NEG P + + DN +P E KPEV+ +D K ++ G+
Sbjct: 750 KNEGRPETPKHRHDNRRDSGKPSTEKKPEVSKHKQDTKSDSPRLKSERAEALKQRPDGRS 809
Query: 54 VEEPLKDKEKPESAGKAKGEGKSERKGKSEMQGGS--KTEGKPERGGRAEGEGEPDSERE 111
V E L+ + +GE + R +S ++ ++ + E G +++ ER+
Sbjct: 810 VSESLRRDHDNKQKSDDRGESERHRGDQSRVRRPETLRSSSRNEHGIKSDSSKTDKLERK 869
Query: 112 PESEGEPESETRAAGKRPAEDDIPRKAKRKTNKGLAQYL 150
E E ++G++ + D PR + +NK + L
Sbjct: 870 HRHESGDSRERPSSGEQKSRPDSPRVKQGDSNKSRSDKL 908
Score = 27.7 bits (60), Expect = 8.4
Identities = 34/153 (22%), Positives = 60/153 (39%), Gaps = 29/153 (18%)
Query: 17 KIDNEEQPPHEGKPEVACILEDKKLENEGNTENTGKRVEEPLKDKEKPESAGKAKGEGKS 76
K++ ++ KP+ A I D+ +++ E++ KR + KD +K E +
Sbjct: 1070 KMNKRKRSTVNEKPKYAEISSDEDNDSDEAFESSRKRHK---KDDDKAWEY-----EERD 1121
Query: 77 ERKGKSEMQGGSKTEG-KPERGGRAEGEGEPDSEREPESEGEPESETRAAGKRPAEDDIP 135
R + G EG + GGR DS+ E S P+ ++
Sbjct: 1122 RRSSGDHRRSGHSHEGRRSSGGGRYRNRSPSDSDMEDYS------------PPPSLSEVA 1169
Query: 136 RKAKRKTNKGLAQYLKQYKEAIHDMNFSNEDMI 168
RK K+K KQ K ++ + E+M+
Sbjct: 1170 RKMKKKE--------KQKKRKAYEPKLTPEEMM 1194
>gi|21361639 DIPB protein [Homo sapiens]
Length = 344
Score = 44.7 bits (104), Expect = 7e-05
Identities = 24/90 (26%), Positives = 44/90 (48%)
Query: 52 KRVEEPLKDKEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSERE 111
+ +E ++ + E +++ E ++E + + E S+ + + E E E E D++ E
Sbjct: 89 REIESEAGEESESEEESESEEESETEEESEDESDEESEEDSEEEMEDEQESEAEEDNQEE 148
Query: 112 PESEGEPESETRAAGKRPAEDDIPRKAKRK 141
ESE E E+E + E + R AKRK
Sbjct: 149 GESEAEGETEAESEFDPEIEMEAERVAKRK 178
Score = 42.7 bits (99), Expect = 3e-04
Identities = 22/67 (32%), Positives = 36/67 (53%)
Query: 65 ESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESEGEPESETRA 124
E AGK + E K E++ + E + G ++E + E E E E +SE E + E E +SE
Sbjct: 74 EGAGKEEAEVKVEQEREIESEAGEESESEEESESEEESETEEESEDESDEESEEDSEEEM 133
Query: 125 AGKRPAE 131
++ +E
Sbjct: 134 EDEQESE 140
Score = 42.7 bits (99), Expect = 3e-04
Identities = 28/96 (29%), Positives = 49/96 (51%), Gaps = 4/96 (4%)
Query: 28 GKPEVACILE-DKKLENEGNTENTGKRV---EEPLKDKEKPESAGKAKGEGKSERKGKSE 83
GK E +E ++++E+E E+ + EE + +E+ E + E SE + + E
Sbjct: 77 GKEEAEVKVEQEREIESEAGEESESEEESESEEESETEEESEDESDEESEEDSEEEMEDE 136
Query: 84 MQGGSKTEGKPERGGRAEGEGEPDSEREPESEGEPE 119
+ ++ + + E AEGE E +SE +PE E E E
Sbjct: 137 QESEAEEDNQEEGESEAEGETEAESEFDPEIEMEAE 172
Score = 39.3 bits (90), Expect = 0.003
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 48 ENTGKRVEEPLKDKEKPESAGKAKGEGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPD 107
E GK E +K +++ E +A E +SE + +SE + ++ E + E +E + E +
Sbjct: 74 EGAGKE-EAEVKVEQEREIESEAGEESESEEESESEEESETEEESEDESDEESEEDSEEE 132
Query: 108 SEREPESE--------GEPESETRAAGKRPAEDDIPRKAKR 140
E E ESE GE E+E + + +I +A+R
Sbjct: 133 MEDEQESEAEEDNQEEGESEAEGETEAESEFDPEIEMEAER 173
Score = 35.8 bits (81), Expect = 0.031
Identities = 18/62 (29%), Positives = 35/62 (56%)
Query: 73 EGKSERKGKSEMQGGSKTEGKPERGGRAEGEGEPDSEREPESEGEPESETRAAGKRPAED 132
+G+ K ++E++ + E + E G +E E E +SE E E+E E E E+ + +E+
Sbjct: 72 DGEGAGKEEAEVKVEQEREIESEAGEESESEEESESEEESETEEESEDESDEESEEDSEE 131
Query: 133 DI 134
++
Sbjct: 132 EM 133
Score = 30.0 bits (66), Expect = 1.7
Identities = 28/99 (28%), Positives = 44/99 (44%), Gaps = 11/99 (11%)
Query: 92 GKPERGGRAEGEGEPDSE--REPESEGEPESETRAAGKRPAEDDIPRKAKRKTNKGLAQY 149
GK E + E E E +SE E ESE E ESE + + +ED+ +++ + + +
Sbjct: 77 GKEEAEVKVEQEREIESEAGEESESEEESESEEESETEEESEDESDEESEEDSEEEMED- 135
Query: 150 LKQYKEAIHDMNFSNE-------DMIREFDNMARVEDKR 181
+Q EA D E + EFD +E +R
Sbjct: 136 -EQESEAEEDNQEEGESEAEGETEAESEFDPEIEMEAER 173
Score = 28.5 bits (62), Expect = 4.9
Identities = 14/50 (28%), Positives = 27/50 (54%)
Query: 95 ERGGRAEGEGEPDSEREPESEGEPESETRAAGKRPAEDDIPRKAKRKTNK 144
E G+ E E + + ERE ESE ESE+ + E + +++ ++++
Sbjct: 74 EGAGKEEAEVKVEQEREIESEAGEESESEEESESEEESETEEESEDESDE 123
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.306 0.130 0.369
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,059,942
Number of Sequences: 37866
Number of extensions: 624823
Number of successful extensions: 6932
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 301
Number of HSP's successfully gapped in prelim test: 571
Number of HSP's that attempted gapping in prelim test: 3823
Number of HSP's gapped (non-prelim): 2525
length of query: 227
length of database: 18,247,518
effective HSP length: 99
effective length of query: 128
effective length of database: 14,498,784
effective search space: 1855844352
effective search space used: 1855844352
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.