Guide to the Human Genome
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Name: TCEAL8 Sequence: fasta or formatted (117aa) NCBI GI: 55749466
Description:

transcription elongation factor A (SII)-like 8

Referenced in:

RNA Polymerase and General Transcription Factors

Other entries for this name:
alt mRNA [117aa] transcription elongation factor A (SII)-like 8
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             2.6          3           1
 C cysteine            1.7          2           1
 D aspartate           4.3          5           1
 E glutamate          16.2         19           2
 F phenylalanine       2.6          3           1
 G glycine             7.7          9           2
 H histidine           2.6          3           1
 I isoleucine          1.7          2           1
 K lysine              5.1          6           1
 L leucine             3.4          4           1
 M methionine          4.3          5           2
 N asparagine          5.1          6           1
 P proline            12.0         14           1
 Q glutamine           6.8          8           1
 R arginine           11.1         13           2
 S serine              4.3          5           1
 T threonine           0.9          1           1
 V valine              6.0          7           1
 W tryptophan          0.9          1           1
 Y tyrosine            0.9          1           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transcription elongation factor A (SII)-like 8 [Homo... 
TCEAL8                1.000   transcription elongation factor A (SII)-like 8 [Homo...
TCEAL7                0.288   transcription elongation factor A (SII)-like 7 [Homo...
WBP5                  0.230   WW domain binding protein 5 
WBP5                  0.230   WW domain binding protein 5 
WBP5                  0.230   WW domain binding protein 5 
WBP5                  0.230   WW domain binding protein 5 
TCEAL1                0.177   transcription elongation factor A (SII)-like 1 [Homo...
TCEAL1                0.177   transcription elongation factor A (SII)-like 1 [Homo...
TCEAL1                0.177   transcription elongation factor A (SII)-like 1 [Homo...
TCEAL3                0.137   transcription elongation factor A (SII)-like 3 [Homo...
TCEAL3                0.137   transcription elongation factor A (SII)-like 3 [Homo...
TCEAL5                0.128   transcription elongation factor A (SII)-like 5 [Homo...
TCEAL6                0.124   transcription elongation factor A (SII)-like 6 [Hom...
TCEAL2                0.102   transcription elongation factor A (SII)-like 2 [Homo...
BEX5                  0.093   brain expressed, X-linked 5 
BEX5                  0.093   brain expressed, X-linked 5 
TCEAL4                0.080   transcription elongation factor A (SII)-like 4 [Homo...
TCEAL4                0.080   transcription elongation factor A (SII)-like 4 [Homo...
TCEAL4                0.080   transcription elongation factor A (SII)-like 4 [Homo...
TCEAL4                0.080   transcription elongation factor A (SII)-like 4 [Homo...
NGFRAP1               0.049   nerve growth factor receptor (TNFRSF16) associated p...
NGFRAP1               0.049   nerve growth factor receptor (TNFRSF16) associated pr...
PRB2                  0.049   proline-rich protein BstNI subfamily 2 
PABPN1                0.044   poly(A) binding protein, nuclear 1 
PRB1                  0.044   proline-rich protein BstNI subfamily 1 isoform 1 pre...
PRB1                  0.044   proline-rich protein BstNI subfamily 1 isoform 3 pre...
PRB1                  0.044   proline-rich protein BstNI subfamily 1 isoform 2 pre...
FNBP4                 0.044   formin binding protein 4 
LOC100132713          0.044   PREDICTED: similar to hCG1654128 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
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