Guide to the Human Genome
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Name: TCEAL2 Sequence: fasta or formatted (227aa) NCBI GI: 17933774
Description:

transcription elongation factor A (SII)-like 2

Referenced in:

RNA Polymerase and General Transcription Factors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.7         13           2
 C cysteine            0.9          2           1
 D aspartate           5.7         13           2
 E glutamate          16.3         37           2
 F phenylalanine       2.6          6           1
 G glycine            10.1         23           2
 H histidine           0.9          2           1
 I isoleucine          2.6          6           1
 K lysine             11.9         27           2
 L leucine             4.0          9           1
 M methionine          3.1          7           1
 N asparagine          5.3         12           1
 P proline             7.5         17           2
 Q glutamine           3.5          8           1
 R arginine            8.8         20           2
 S serine              4.4         10           1
 T threonine           2.6          6           1
 V valine              1.8          4           1
 W tryptophan          0.4          1           1
 Y tyrosine            1.8          4           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   transcription elongation factor A (SII)-like 2 [Homo... 
TCEAL4                0.742   transcription elongation factor A (SII)-like 4 [Homo...
TCEAL4                0.742   transcription elongation factor A (SII)-like 4 [Homo...
TCEAL4                0.742   transcription elongation factor A (SII)-like 4 [Homo...
TCEAL4                0.742   transcription elongation factor A (SII)-like 4 [Homo...
TCEAL5                0.360   transcription elongation factor A (SII)-like 5 [Homo...
TCEAL3                0.321   transcription elongation factor A (SII)-like 3 [Homo...
TCEAL3                0.321   transcription elongation factor A (SII)-like 3 [Homo...
TCEAL6                0.270   transcription elongation factor A (SII)-like 6 [Hom...
WBP5                  0.083   WW domain binding protein 5 
WBP5                  0.083   WW domain binding protein 5 
WBP5                  0.083   WW domain binding protein 5 
WBP5                  0.083   WW domain binding protein 5 
RPGR                  0.070   retinitis pigmentosa GTPase regulator isoform C [Hom...
RBM25                 0.065   RNA binding motif protein 25 
MDN1                  0.061   MDN1, midasin homolog 
RP1L1                 0.058   retinitis pigmentosa 1-like 1 
LOC100133599          0.056   PREDICTED: hypothetical protein 
NSBP1                 0.056   nucleosomal binding protein 1 
LOC100294088          0.054   PREDICTED: hypothetical protein, partial 
LOC100286959          0.052   PREDICTED: hypothetical protein XP_002343921 
TCEAL8                0.052   transcription elongation factor A (SII)-like 8 [Homo...
TCEAL8                0.052   transcription elongation factor A (SII)-like 8 [Homo...
PTMA                  0.049   prothymosin, alpha isoform 1 
SLC24A1               0.049   solute carrier family 24 (sodium/potassium/calcium ex...
PRB3                  0.049   proline-rich protein BstNI subfamily 3 precursor [H...
NEFH                  0.045   neurofilament, heavy polypeptide 200kDa 
NIPBL                 0.045   delangin isoform B 
NIPBL                 0.045   delangin isoform A 
TRIM44                0.045   DIPB protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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