Guide to the Human Genome
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Name: CAPG Sequence: fasta or formatted (348aa) NCBI GI: 63252913
Description:

gelsolin-like capping protein

Referenced in:

Cytoskeleton

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.2         32           3
 C cysteine            1.4          5           1
 D aspartate           5.2         18           2
 E glutamate           7.5         26           2
 F phenylalanine       4.3         15           2
 G glycine             8.3         29           2
 H histidine           2.3          8           1
 I isoleucine          4.6         16           1
 K lysine              6.9         24           2
 L leucine             8.9         31           2
 M methionine          1.4          5           1
 N asparagine          4.6         16           1
 P proline             5.2         18           1
 Q glutamine           6.6         23           2
 R arginine            4.0         14           1
 S serine              6.0         21           2
 T threonine           3.2         11           1
 V valine              6.3         22           1
 W tryptophan          1.7          6           1
 Y tyrosine            2.3          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   gelsolin-like capping protein 
SCIN                  0.479   scinderin isoform 1 
GSN                   0.464   gelsolin isoform a precursor 
GSN                   0.464   gelsolin isoform b 
GSN                   0.464   gelsolin isoform c 
GSN                   0.464   gelsolin isoform c 
GSN                   0.464   gelsolin isoform b 
GSN                   0.464   gelsolin isoform b 
GSN                   0.464   gelsolin isoform b 
GSN                   0.464   gelsolin isoform b 
VIL1                  0.343   villin 1 
AVIL                  0.340   advillin 
VILL                  0.272   villin-like protein 
FLII                  0.180   flightless I homolog 
SCIN                  0.152   scinderin isoform 2 
SVIL                  0.054   supervillin isoform 2 
SVIL                  0.054   supervillin isoform 1 
COL15A1               0.012   alpha 1 type XV collagen precursor 
LOC100290879          0.007   PREDICTED: hypothetical protein XP_002347499 
LOC100286940          0.007   PREDICTED: hypothetical protein XP_002343317 
ZNF574                0.007   zinc finger protein 574 
EML5                  0.006   echinoderm microtubule associated protein like 5 [Ho...
LRRC7                 0.006   leucine rich repeat containing 7 
GLCE                  0.006   D-glucuronyl C5-epimerase 
ZNF434                0.004   zinc finger protein 434 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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