Guide to the Human Genome
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Name: GSN Sequence: fasta or formatted (731aa) NCBI GI: 189083774
Description:

gelsolin isoform b

Referenced in:

Cytoskeleton

Other entries for this name:
alt mRNA [731aa] gelsolin isoform b
alt mRNA [731aa] gelsolin isoform b
alt mRNA [731aa] gelsolin isoform b
alt prot [742aa] gelsolin isoform c
alt prot [742aa] gelsolin isoform c
alt mRNA [731aa] gelsolin isoform b
alt prot [782aa] gelsolin isoform a precursor
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             9.3         68           3
 C cysteine            0.7          5           1
 D aspartate           6.3         46           3
 E glutamate           6.8         50           3
 F phenylalanine       4.2         31           2
 G glycine             9.3         68           2
 H histidine           1.8         13           1
 I isoleucine          3.1         23           2
 K lysine              6.2         45           2
 L leucine             7.8         57           2
 M methionine          1.6         12           1
 N asparagine          3.7         27           2
 P proline             4.8         35           2
 Q glutamine           5.3         39           1
 R arginine            5.1         37           2
 S serine              5.6         41           2
 T threonine           5.5         40           1
 V valine              7.8         57           3
 W tryptophan          2.1         15           1
 Y tyrosine            3.0         22           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   gelsolin isoform b 
GSN                   1.000   gelsolin isoform a precursor 
GSN                   1.000   gelsolin isoform b 
GSN                   1.000   gelsolin isoform c 
GSN                   1.000   gelsolin isoform c 
GSN                   1.000   gelsolin isoform b 
GSN                   1.000   gelsolin isoform b 
GSN                   1.000   gelsolin isoform b 
SCIN                  0.610   scinderin isoform 1 
VIL1                  0.451   villin 1 
AVIL                  0.423   advillin 
SCIN                  0.395   scinderin isoform 2 
VILL                  0.327   villin-like protein 
CAPG                  0.217   gelsolin-like capping protein 
FLII                  0.160   flightless I homolog 
SVIL                  0.078   supervillin isoform 2 
SVIL                  0.078   supervillin isoform 1 
HIC2                  0.004   hypermethylated in cancer 2 
CAST                  0.004   calpastatin isoform g 
IKBKAP                0.003   inhibitor of kappa light polypeptide gene enhancer i...
SPTBN5                0.003   spectrin, beta, non-erythrocytic 5 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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