Guide to the Human Genome
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Name: TXNIP Sequence: fasta or formatted (391aa) NCBI GI: 171184421
Description:

thioredoxin interacting protein

Referenced in:

Glutathione Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.3         17           2
 C cysteine            2.8         11           1
 D aspartate           5.6         22           2
 E glutamate           6.4         25           1
 F phenylalanine       3.6         14           1
 G glycine             6.1         24           1
 H histidine           1.0          4           1
 I isoleucine          5.6         22           2
 K lysine              7.2         28           2
 L leucine             7.2         28           3
 M methionine          3.3         13           1
 N asparagine          3.3         13           3
 P proline             6.9         27           3
 Q glutamine           3.3         13           2
 R arginine            5.1         20           1
 S serine              8.7         34           2
 T threonine           5.1         20           2
 V valine             10.0         39           2
 W tryptophan          1.0          4           1
 Y tyrosine            3.3         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   thioredoxin interacting protein 
ARRDC4                0.405   arrestin domain containing 4 
ARRDC3                0.368   arrestin domain containing 3 
ARRDC2                0.307   arrestin domain containing 2 isoform 1 
ARRDC2                0.297   arrestin domain containing 2 isoform 2 
ARRDC1                0.074   arrestin domain containing 1 
ARRDC5                0.026   arrestin domain containing 5 
WDR38                 0.007   WD repeat domain 38 
LITAF                 0.007   lipopolysaccharide-induced TNF-alpha factor isoform...
LITAF                 0.007   lipopolysaccharide-induced TNF-alpha factor isoform...
LITAF                 0.007   lipopolysaccharide-induced TNF-alpha factor isoform ...
MAP3K11               0.007   mitogen-activated protein kinase kinase kinase 11 [Ho...
FAM83B                0.007   hypothetical protein LOC222584 
SYNPO                 0.005   synaptopodin isoform B 
SYNPO                 0.005   synaptopodin isoform A 
ZNF500                0.005   zinc finger protein 500 
NHSL1                 0.005   NHS-like 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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