Guide to the Human Genome
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Name: ARRDC3 Sequence: fasta or formatted (414aa) NCBI GI: 32698736
Description:

arrestin domain containing 3

Referenced in:

Glutathione Pathways

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.6         23           2
 C cysteine            2.2          9           2
 D aspartate           4.1         17           3
 E glutamate           7.7         32           2
 F phenylalanine       4.1         17           1
 G glycine             5.6         23           1
 H histidine           2.7         11           1
 I isoleucine          5.6         23           2
 K lysine              5.3         22           2
 L leucine             8.7         36           2
 M methionine          1.7          7           1
 N asparagine          4.3         18           2
 P proline             7.2         30           3
 Q glutamine           2.9         12           1
 R arginine            5.3         22           2
 S serine             10.4         43           2
 T threonine           5.3         22           1
 V valine              6.5         27           2
 W tryptophan          1.4          6           1
 Y tyrosine            3.4         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   arrestin domain containing 3 
ARRDC2                0.495   arrestin domain containing 2 isoform 1 
ARRDC4                0.476   arrestin domain containing 4 
ARRDC2                0.447   arrestin domain containing 2 isoform 2 
TXNIP                 0.345   thioredoxin interacting protein 
ARRDC1                0.088   arrestin domain containing 1 
ARRDC5                0.050   arrestin domain containing 5 
ASXL3                 0.009   additional sex combs like 3 
TRH                   0.006   thyrotropin-releasing hormone 
ARRB1                 0.005   arrestin beta 1 isoform A 
ARRB1                 0.005   arrestin beta 1 isoform B 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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