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Search of human proteins with 170932501
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|170932501 triggering receptor expressed on myeloid
cells-like 2 [Homo sapiens]
(321 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|170932501 triggering receptor expressed on myeloid cells-like... 651 0.0
gi|153945782 natural cytotoxicity triggering receptor 2 [Homo sa... 63 4e-10
gi|37700254 triggering receptor expressed on myeloid cells-like ... 58 1e-08
gi|21687218 CD300 molecule-like family member g [Homo sapiens] 55 8e-08
gi|56550061 leukocyte membrane antigen [Homo sapiens] 47 2e-05
gi|38455398 NK inhibitory receptor precursor [Homo sapiens] 47 3e-05
gi|154759271 CD300 molecule-like family member b [Homo sapiens] 47 3e-05
gi|239752523 PREDICTED: intestinal mucin-like, partial [Homo sap... 44 2e-04
gi|239508973 PREDICTED: similar to Mucin-3A [Homo sapiens] 44 3e-04
gi|31324530 CD300e molecule [Homo sapiens] 44 3e-04
gi|239756941 PREDICTED: similar to CD300C antigen [Homo sapiens] 43 4e-04
gi|239751445 PREDICTED: similar to CD300C antigen [Homo sapiens] 43 4e-04
gi|239745950 PREDICTED: similar to CD300C antigen [Homo sapiens] 43 4e-04
gi|239743291 PREDICTED: mucin 3A, intestinal [Homo sapiens] 43 4e-04
gi|116284392 mucin 2 precursor [Homo sapiens] 42 6e-04
gi|226498466 T-cell immunoglobulin and mucin domain containing 4... 42 0.001
gi|169646348 CD300 molecule-like family member d [Homo sapiens] 41 0.002
gi|30794266 triggering receptor expressed on myeloid cells-like ... 40 0.003
gi|5729776 CD300C antigen [Homo sapiens] 40 0.004
gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens] 39 0.005
gi|7657570 sialic acid binding Ig-like lectin 7 isoform 1 [Homo ... 39 0.005
gi|161019170 mucin 5AC [Homo sapiens] 39 0.008
gi|153085429 hepatitis A virus cellular receptor 1 [Homo sapiens] 39 0.008
gi|153085427 hepatitis A virus cellular receptor 1 [Homo sapiens] 39 0.008
gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens] 39 0.008
gi|8924262 triggering receptor expressed on myeloid cells 1 [Hom... 38 0.011
gi|239757995 PREDICTED: similar to hCG1747327, partial [Homo sap... 38 0.011
gi|239740777 PREDICTED: hypothetical protein [Homo sapiens] 37 0.018
gi|239740724 PREDICTED: hypothetical protein [Homo sapiens] 37 0.018
gi|187960059 syndecan 3 [Homo sapiens] 37 0.023
>gi|170932501 triggering receptor expressed on myeloid cells-like 2
[Homo sapiens]
Length = 321
Score = 651 bits (1679), Expect = 0.0
Identities = 321/321 (100%), Positives = 321/321 (100%)
Query: 1 MAPAFLLLLLLWPQGCVSGPSADSVYTKVRLLEGETLSVQCSYKGYKNRVEGKVWCKIRK 60
MAPAFLLLLLLWPQGCVSGPSADSVYTKVRLLEGETLSVQCSYKGYKNRVEGKVWCKIRK
Sbjct: 1 MAPAFLLLLLLWPQGCVSGPSADSVYTKVRLLEGETLSVQCSYKGYKNRVEGKVWCKIRK 60
Query: 61 KKCEPGFARVWVKGPRYLLQDDAQAKVVNITMVALKLQDSGRYWCMRNTSGILYPLMGFQ 120
KKCEPGFARVWVKGPRYLLQDDAQAKVVNITMVALKLQDSGRYWCMRNTSGILYPLMGFQ
Sbjct: 61 KKCEPGFARVWVKGPRYLLQDDAQAKVVNITMVALKLQDSGRYWCMRNTSGILYPLMGFQ 120
Query: 121 LDVSPAPQTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLA 180
LDVSPAPQTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLA
Sbjct: 121 LDVSPAPQTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLA 180
Query: 181 STRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLSTRSP 240
STRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLSTRSP
Sbjct: 181 STRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLSTRSP 240
Query: 241 TTGLCLTSRSLLNRLPSMPSIRHQDVYSTVLGVVLTLLVLMLIMVYGFWKKRHMASYSMC 300
TTGLCLTSRSLLNRLPSMPSIRHQDVYSTVLGVVLTLLVLMLIMVYGFWKKRHMASYSMC
Sbjct: 241 TTGLCLTSRSLLNRLPSMPSIRHQDVYSTVLGVVLTLLVLMLIMVYGFWKKRHMASYSMC 300
Query: 301 SDPSTRDPPGRPEPYVEVYLI 321
SDPSTRDPPGRPEPYVEVYLI
Sbjct: 301 SDPSTRDPPGRPEPYVEVYLI 321
>gi|153945782 natural cytotoxicity triggering receptor 2 [Homo
sapiens]
Length = 276
Score = 62.8 bits (151), Expect = 4e-10
Identities = 53/173 (30%), Positives = 77/173 (44%), Gaps = 21/173 (12%)
Query: 6 LLLLLLWPQGCVSGPSADSVYTKVRLLEGETLSVQCSYKGYKNRVEGKVWCK-------I 58
LLLLLL+P G A S ++ + G+TL+V+C Y + E K WCK I
Sbjct: 10 LLLLLLFP-----GSQAQSKAQVLQSVAGQTLTVRCQYPPTGSLYEKKGWCKEASALVCI 64
Query: 59 RKKKCEPGFARVWVKGPRYLLQDDAQAKVVNITMVALKLQDSGRYWC--MRNTSGILYPL 116
R W R+ + DD A +TM L+ +DSG YWC R + +
Sbjct: 65 RLVTSSKPRTMAWTS--RFTIWDDPDAGFFTVTMTDLREEDSGHYWCRIYRPSDNSVSKS 122
Query: 117 MGFQLDVSPAPQTERNIPFTHLDNILKSGTVTTGQAPTSG----PDAPFTTGV 165
+ F L VSPA + + +T D + + PT+G P++P T V
Sbjct: 123 VRFYLVVSPASASTQT-SWTPRDLVSSQTQTQSCVPPTAGARQAPESPSTIPV 174
>gi|37700254 triggering receptor expressed on myeloid cells-like 4
[Homo sapiens]
Length = 200
Score = 58.2 bits (139), Expect = 1e-08
Identities = 47/152 (30%), Positives = 64/152 (42%), Gaps = 18/152 (11%)
Query: 12 WPQGCVSGPSADSVYTKVRLLEGETLSVQCSYKGYKNRVEGKVWCK-IRKKKCE--PGFA 68
WPQG V ++ G+TL +QC Y + + K WC+ +C +
Sbjct: 19 WPQGAVP--------EELHKHPGQTLLLQCQYSPKRGPYQPKSWCQQTSPSRCTLLVTSS 70
Query: 69 RVW--VKGPRYLLQDDAQAKVVNITMVALKLQDSGRYWC--MRNTSGILYPLMGFQLDVS 124
+ W V+ Y + D A NITM+ L DSG YWC + I+ L L VS
Sbjct: 71 KPWTAVQKSHYTIWDKPNAGFFNITMIQLTQNDSGFYWCGIYNASENIITVLRNISLVVS 130
Query: 125 PAPQTERNIPFTHLDNILKSGTVTTGQAPTSG 156
PAP T P L + S + T TSG
Sbjct: 131 PAPTTS---PMWTLPWLPTSTVLITSPEGTSG 159
>gi|21687218 CD300 molecule-like family member g [Homo sapiens]
Length = 332
Score = 55.1 bits (131), Expect = 8e-08
Identities = 86/293 (29%), Positives = 120/293 (40%), Gaps = 54/293 (18%)
Query: 7 LLLLLWPQGCVSGPSADSVY--TKVRLLEGETLSVQCSYKGYKNRVEGKVWCK---IRKK 61
LL+LLW GC+ P +++ ++ EG+T+S+QC+Y+ + R K WC+ I
Sbjct: 3 LLVLLW--GCLLLPGYEALEGPEEISGFEGDTVSLQCTYRE-ELRDHRKYWCRKGGILFS 59
Query: 62 KCEPGF-----ARVWVKGPRYLLQDDAQAKVVNITMVALKLQDSGRYWCMRNTSGILYPL 116
+C + +KG R ++D Q + +T+ L LQD+G YWC G L
Sbjct: 60 RCSGTIYAEEEGQETMKG-RVSIRDSRQELSLIVTLWNLTLQDAGEYWCGVEKRGPDESL 118
Query: 117 MGFQLDVSPAPQTERNIPFTHLDNILKSGTVTTGQAPTSGPDA-----PFTTGVMVFTPG 171
+ L V P P +PT P A P PG
Sbjct: 119 L-ISLFVFPGP------------------CCPPSPSPTFQPLATTRLQPKAKAQQTQPPG 159
Query: 172 LITLPRL--LASTRPASKTGYSFTATSTTSQ-GPRRTMGSQTVTASPSNARDSSAGPESI 228
L T P L A+T KTG TSQ G RT SQ SP A AG
Sbjct: 160 L-TSPGLYPAATTAKQGKTGAEAPPLPGTSQYGHERT--SQYTGTSPHPATSPPAGSSRP 216
Query: 229 STKSGDLSTRSPTTGLCLTSRSLLNRLPSMPSIRHQDVYSTVLGVVLTLLVLM 281
+ ST + T L+S S R+ S+P +R +L VL LL L+
Sbjct: 217 PMQLN--STSAEDTSPALSSGSSKPRV-SIPMVR-------ILAPVLVLLSLL 259
>gi|56550061 leukocyte membrane antigen [Homo sapiens]
Length = 299
Score = 47.0 bits (110), Expect = 2e-05
Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 26/160 (16%)
Query: 8 LLLLWPQGCVSGPSADSVYTKVRLLEGETLSVQCSYKGYKNRVEGKVWC---------KI 58
LLLLW GC + +V V G +LSVQC Y+ ++R K WC KI
Sbjct: 7 LLLLWVPGCFALSKCRTVAGPV----GGSLSVQCPYEK-EHRTLNKYWCRPPQIFLCDKI 61
Query: 59 RKKKCEPGFARVWVKGPRYLLQDDAQAKVVNITMVALKLQDSGRYWCMRNTSGIL---YP 115
+ K G + R ++D +T+ L +D+G YWC +T + P
Sbjct: 62 VETKGSAG-----KRNGRVSIRDSPANLSFTVTLENLTEEDAGTYWCGVDTPWLRDFHDP 116
Query: 116 LMGFQLDVSPAPQTERNIPFTHLDNILKSGTVTTGQAPTS 155
++ ++ V PA + T K+ T+TT P S
Sbjct: 117 VVEVEVSVFPASTSMTPASIT----AAKTSTITTAFPPVS 152
>gi|38455398 NK inhibitory receptor precursor [Homo sapiens]
Length = 290
Score = 46.6 bits (109), Expect = 3e-05
Identities = 46/152 (30%), Positives = 69/152 (45%), Gaps = 26/152 (17%)
Query: 6 LLLLLLWPQGC-----VSGPSADSVYTKVRLLEGETLSVQCSYK-GYKNRVE----GKVW 55
L LLL W G ++GP T V LE +L+VQC Y+ G++ ++ G +W
Sbjct: 6 LYLLLFWLSGYSIVTQITGP------TTVNGLERGSLTVQCVYRSGWETYLKWWCRGAIW 59
Query: 56 --CKIRKKKCEPGFARVWVKGPRYLLQDDAQAKVVNITMVALKLQDSGRYWC-MRNTSGI 112
CKI K + VK R ++D+ + + +TM L D+ YWC + T
Sbjct: 60 RDCKILVKTSG---SEQEVKRDRVSIKDNQKNRTFTVTMEDLMKTDADTYWCGIEKTGND 116
Query: 113 LYPLMGFQLDVSPAPQTERNIPFT----HLDN 140
L + +D +P Q E + T HLDN
Sbjct: 117 LGVTVQVTIDPAPVTQEETSSSPTLTGHHLDN 148
>gi|154759271 CD300 molecule-like family member b [Homo sapiens]
Length = 238
Score = 46.6 bits (109), Expect = 3e-05
Identities = 42/134 (31%), Positives = 63/134 (47%), Gaps = 18/134 (13%)
Query: 1 MAPAFLLLLLLWPQGCVSGPSADSVYTKVRLLEGETLSVQCSYK-GYKNRVEGKVWCK-I 58
+ PA LLL L GC S +SV R E +L+VQC YK G++ + K WC+ +
Sbjct: 40 LPPALLLLSL---SGCFSIQGPESV----RAPEQGSLTVQCHYKQGWETYI--KWWCRGV 90
Query: 59 RKKKC----EPGFARVWVKGPRYLLQDDAQAKVVNITMVALKLQDSGRYWCMRNTSGILY 114
R C E + K R ++D+ + + +TM L+ D+ YWC G
Sbjct: 91 RWDTCKILIETRGSEQGEKSDRVSIKDNQKDRTFTVTMEGLRRDDADVYWCGIERRG--- 147
Query: 115 PLMGFQLDVSPAPQ 128
P +G Q+ V P+
Sbjct: 148 PDLGTQVKVIVDPE 161
>gi|239752523 PREDICTED: intestinal mucin-like, partial [Homo
sapiens]
Length = 514
Score = 43.9 bits (102), Expect = 2e-04
Identities = 41/147 (27%), Positives = 65/147 (44%), Gaps = 11/147 (7%)
Query: 124 SPAPQTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTR 183
SP T N + L + + S T+ P++ TT + +P L TLP + +
Sbjct: 70 SPPTTTNSNSTLSSLTSSILSSTLV----PSTDMITSHTTNLTRSSPLLATLPTTITRST 125
Query: 184 PASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLSTRSPTTG 243
P S+T Y + TST S ++T + S ++S P S S + + +T +PTT
Sbjct: 126 PTSETTYPTSPTSTVKGSTTSIRYSTSMTGTLS--METSLPPTSSSLPTTETAT-TPTTN 182
Query: 244 LCLTSRSLLNRLPSMPSIRHQDVYSTV 270
L T + S PS ++STV
Sbjct: 183 LVTTEIT----SHSTPSFSSSTIHSTV 205
Score = 30.8 bits (68), Expect = 1.7
Identities = 34/131 (25%), Positives = 57/131 (43%), Gaps = 13/131 (9%)
Query: 135 FTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPASKTGYSFTA 194
FT N L S +TT S F++ + + G T ++ PAS + TA
Sbjct: 308 FTSTHNTLTSSLLTTFPGTYS-----FSSSMSASSDG--TTHTETITSLPASTSTLHTTA 360
Query: 195 TSTTSQGPRRTMGSQTVTASPSNA-RDSSAGPESISTKSG---DLSTRSPTTGLCLTSRS 250
STT+ + + T SPS++ +S G + S+ + + +T +PTT + +
Sbjct: 361 ESTTAHTTTTSFTTSTTMESPSSSVATTSTGQTTFSSSTATFTETTTLTPTTD--FSEET 418
Query: 251 LLNRLPSMPSI 261
L + S P I
Sbjct: 419 LTTAMTSTPPI 429
Score = 28.5 bits (62), Expect = 8.4
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 140 NILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPASKTGYSFTATST 197
NIL S V + + TS TT + + + TLP + + P ++T Y ++TST
Sbjct: 461 NILSSTPVPSTERTTS-----HTTNINPVSTLVTTLPTTITRSTPTAETTYPISSTST 513
>gi|239508973 PREDICTED: similar to Mucin-3A [Homo sapiens]
Length = 596
Score = 43.5 bits (101), Expect = 3e-04
Identities = 38/136 (27%), Positives = 65/136 (47%), Gaps = 16/136 (11%)
Query: 141 ILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPASKTGYSFTATSTTSQ 200
+L + T+T+G T+ P +T V TLP ++ + P S+T Y + TST +
Sbjct: 298 VLSTETITSGITNTT----PLSTLVT-------TLPTTISRSTPTSETTYPTSPTSTVTD 346
Query: 201 GPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLSTRSPTTGLCLTSRSLLNRLPSMPS 260
+ S ++T + S ++S P S S + + +T +P T L T+ + + S PS
Sbjct: 347 STTKIAYSTSMTGTLST--ETSLPPTSSSLPTTETAT-TPMTNLVTTTTEISSH--STPS 401
Query: 261 IRHQDVYSTVLGVVLT 276
+YSTV + T
Sbjct: 402 FSSSTIYSTVTSHIST 417
>gi|31324530 CD300e molecule [Homo sapiens]
Length = 205
Score = 43.5 bits (101), Expect = 3e-04
Identities = 47/146 (32%), Positives = 63/146 (43%), Gaps = 28/146 (19%)
Query: 1 MAPAFLLLLLLWPQGCVSGPSADSVYTKVRLLEGETLSVQCSY----KGYKNRVEGKVWC 56
+ PA LLL L GC+S SV G++L+V C Y KGY K WC
Sbjct: 3 LLPALLLLCL---SGCLSLTGPGSVTGTA----GDSLTVWCQYESMYKGYN-----KYWC 50
Query: 57 KIR-KKKCEP-----GFARVWVKGPRYLLQDDAQAKVVNITMVALKLQDSGRYWCMRNTS 110
+ + CE G +V G R ++D +A +TM L D+G YWC T
Sbjct: 51 RGQYDTSCESIVETKGEEKVERNG-RVSIRDHPEALAFTVTMQNLNEDDAGSYWCKIQTV 109
Query: 111 GIL-----YPLMGFQLDVSPAPQTER 131
+L P ++ VSPA T R
Sbjct: 110 WVLDSWSRDPSDLVRVYVSPAITTPR 135
>gi|239756941 PREDICTED: similar to CD300C antigen [Homo sapiens]
Length = 328
Score = 42.7 bits (99), Expect = 4e-04
Identities = 42/134 (31%), Positives = 59/134 (44%), Gaps = 22/134 (16%)
Query: 15 GC--VSGPSADSVYTKVRLLEGETLSVQCSYKGYKNRVEGKVWCK-----IRKKKCEPGF 67
GC VSGPS V GE+LSVQC Y+ K + K WC+ I + E G
Sbjct: 148 GCLTVSGPST------VMGAVGESLSVQCRYE-EKYKTFNKYWCRQPCLPIWHEMVETGG 200
Query: 68 ARVWVKGPRYLLQDDAQAKVVNITMVALKLQDSGRYWCMRNT-------SGIL-YPLMGF 119
+ V+ + ++ D +T+ L D+G+Y C T SG L P
Sbjct: 201 SEGVVRSDQVIITDHPGDLTFTVTLENLTADDAGKYRCGIATILQEDGLSGFLPDPFFQV 260
Query: 120 QLDVSPAPQTERNI 133
Q+ VS A TE ++
Sbjct: 261 QVLVSSASSTENSV 274
>gi|239751445 PREDICTED: similar to CD300C antigen [Homo sapiens]
Length = 259
Score = 42.7 bits (99), Expect = 4e-04
Identities = 42/134 (31%), Positives = 59/134 (44%), Gaps = 22/134 (16%)
Query: 15 GC--VSGPSADSVYTKVRLLEGETLSVQCSYKGYKNRVEGKVWCK-----IRKKKCEPGF 67
GC VSGPS V GE+LSVQC Y+ K + K WC+ I + E G
Sbjct: 79 GCLTVSGPST------VMGAVGESLSVQCRYE-EKYKTFNKYWCRQPCLPIWHEMVETGG 131
Query: 68 ARVWVKGPRYLLQDDAQAKVVNITMVALKLQDSGRYWCMRNT-------SGIL-YPLMGF 119
+ V+ + ++ D +T+ L D+G+Y C T SG L P
Sbjct: 132 SEGVVRSDQVIITDHPGDLTFTVTLENLTADDAGKYRCGIATILQEDGLSGFLPDPFFQV 191
Query: 120 QLDVSPAPQTERNI 133
Q+ VS A TE ++
Sbjct: 192 QVLVSSASSTENSV 205
>gi|239745950 PREDICTED: similar to CD300C antigen [Homo sapiens]
Length = 328
Score = 42.7 bits (99), Expect = 4e-04
Identities = 42/134 (31%), Positives = 59/134 (44%), Gaps = 22/134 (16%)
Query: 15 GC--VSGPSADSVYTKVRLLEGETLSVQCSYKGYKNRVEGKVWCK-----IRKKKCEPGF 67
GC VSGPS V GE+LSVQC Y+ K + K WC+ I + E G
Sbjct: 148 GCLTVSGPST------VMGAVGESLSVQCRYE-EKYKTFNKYWCRQPCLPIWHEMVETGG 200
Query: 68 ARVWVKGPRYLLQDDAQAKVVNITMVALKLQDSGRYWCMRNT-------SGIL-YPLMGF 119
+ V+ + ++ D +T+ L D+G+Y C T SG L P
Sbjct: 201 SEGVVRSDQVIITDHPGDLTFTVTLENLTADDAGKYRCGIATILQEDGLSGFLPDPFFQV 260
Query: 120 QLDVSPAPQTERNI 133
Q+ VS A TE ++
Sbjct: 261 QVLVSSASSTENSV 274
>gi|239743291 PREDICTED: mucin 3A, intestinal [Homo sapiens]
Length = 1486
Score = 42.7 bits (99), Expect = 4e-04
Identities = 37/130 (28%), Positives = 63/130 (48%), Gaps = 16/130 (12%)
Query: 141 ILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPASKTGYSFTATSTTSQ 200
+L + T+T+G T+ P +T V TLP ++ + P S+T Y + TST +
Sbjct: 298 VLSTETITSGITNTT----PLSTLVT-------TLPTTISRSTPTSETTYPTSPTSTVTD 346
Query: 201 GPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLSTRSPTTGLCLTSRSLLNRLPSMPS 260
+ S ++T + S ++S P S S + + +T +P T L T+ + + S PS
Sbjct: 347 STTKIAYSTSMTGTLST--ETSLPPTSSSLPTTETAT-TPMTNLVTTTTEISSH--STPS 401
Query: 261 IRHQDVYSTV 270
+YSTV
Sbjct: 402 FSSSTIYSTV 411
Score = 32.3 bits (72), Expect = 0.58
Identities = 29/99 (29%), Positives = 42/99 (42%), Gaps = 15/99 (15%)
Query: 154 TSGPDAPFTTGVMVFTPGLITLPRLLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTA 213
TS P P T V FT ++T P T S T TT M +
Sbjct: 959 TSPPTTPLT--VFPFTTEMVTCP-----------TSISIQTTLTTYMDTSSMMPESESSI 1005
Query: 214 SPSNARDSSAGPESISTKSGDLSTRSPTTGLCLTSRSLL 252
SP+ + SS G ++ T + STR PT+ L++ S++
Sbjct: 1006 SPNAS--SSTGTGTVPTNTVFTSTRLPTSETWLSNSSVI 1042
>gi|116284392 mucin 2 precursor [Homo sapiens]
Length = 5179
Score = 42.4 bits (98), Expect = 6e-04
Identities = 39/126 (30%), Positives = 52/126 (41%), Gaps = 16/126 (12%)
Query: 146 TVTTGQAPTSGPDAPFTTG-----VMVFTPGLITLPRLLASTRPASKTGYSFTATSTTSQ 200
T TT PT+ P P TT TP T P +T P+ T T+ T+
Sbjct: 1646 TTTTTPPPTTTPSPPTTTTPSPPITTTTTPPPTTTPSSPITTTPSPPT------TTMTTP 1699
Query: 201 GPRRTMGSQ-TVTASPSNARDSSAGPESISTKSGDLSTRSPTTGLC----LTSRSLLNRL 255
P T S T T +PS+ S P +++T S + PTT + T+ S L
Sbjct: 1700 SPTTTPSSPITTTTTPSSTTTPSPPPTTMTTPSPTTTPSPPTTTMTTLPPTTTSSPLTTT 1759
Query: 256 PSMPSI 261
P PSI
Sbjct: 1760 PLPPSI 1765
Score = 38.9 bits (89), Expect = 0.006
Identities = 33/111 (29%), Positives = 44/111 (39%), Gaps = 3/111 (2%)
Query: 146 TVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPASKTGYSFTATSTTSQGPRRT 205
T TT PT+ P P TT P P + +T P T S ++TT+ P T
Sbjct: 1411 TSTTTLPPTTTPSPPTTTTTTP-PPTTTPSPPITTTTTPPPTTTPSPPISTTTTPPPTTT 1469
Query: 206 MGSQTVTASPSNARDSSAGPESISTKSGDLSTRSPTTGLCLTSRSLLNRLP 256
T T SP S P + +T +T SP T +T + LP
Sbjct: 1470 PSPPTTTPSPPTTTPSP--PTTTTTTPPPTTTPSPPTTTPITPPASTTTLP 1518
Score = 38.1 bits (87), Expect = 0.011
Identities = 43/142 (30%), Positives = 56/142 (39%), Gaps = 22/142 (15%)
Query: 123 VSPAP-----QTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPR 177
V+P P QT P T + + T T Q PT+ P TT TP
Sbjct: 4115 VTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTP------- 4167
Query: 178 LLASTRPASKTGYSFTATSTTSQGPRRTM---GSQTVTASPSNARDSSAGPESISTKSGD 234
T+ + T + T T T + P T + T TA + S+ PES ST
Sbjct: 4168 --TGTQTPTTTPITTTTTVTPTPTPTGTQTGPPTHTSTAPIAELTTSNPPPES-STPQTS 4224
Query: 235 LSTRSPTTGLCLTSRSLLNRLP 256
ST SP T S +LL+ LP
Sbjct: 4225 RSTSSPLT----ESTTLLSTLP 4242
Score = 36.6 bits (83), Expect = 0.031
Identities = 32/110 (29%), Positives = 48/110 (43%), Gaps = 8/110 (7%)
Query: 124 SPAPQTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTR 183
+P P T + P T + T TT PT+ P +P TT +P T+ +T
Sbjct: 1650 TPPPTTTPSPPTTTTPS--PPITTTTTPPPTTTPSSPITT---TPSPPTTTMTTPSPTTT 1704
Query: 184 PASKTGYSFTATSTTSQGP---RRTMGSQTVTASPSNARDSSAGPESIST 230
P+S + T +STT+ P T S T T SP ++ P + S+
Sbjct: 1705 PSSPITTTTTPSSTTTPSPPPTTMTTPSPTTTPSPPTTTMTTLPPTTTSS 1754
Score = 35.8 bits (81), Expect = 0.052
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 123 VSPAP-----QTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPR 177
V+P P QT P T + + T T Q PT+ P TT TP P
Sbjct: 1907 VTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP- 1965
Query: 178 LLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLST 237
+T + T + T T T +Q P T + T T +P+ + P + + T
Sbjct: 1966 --TTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVT 2023
Query: 238 RSPT 241
+PT
Sbjct: 2024 PTPT 2027
Score = 35.8 bits (81), Expect = 0.052
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 123 VSPAP-----QTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPR 177
V+P P QT P T + + T T Q PT+ P TT TP P
Sbjct: 1976 VTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP- 2034
Query: 178 LLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLST 237
+T + T + T T T +Q P T + T T +P+ + P + + T
Sbjct: 2035 --TTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVT 2092
Query: 238 RSPT 241
+PT
Sbjct: 2093 PTPT 2096
Score = 35.8 bits (81), Expect = 0.052
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 123 VSPAP-----QTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPR 177
V+P P QT P T + + T T Q PT+ P TT TP P
Sbjct: 2045 VTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP- 2103
Query: 178 LLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLST 237
+T + T + T T T +Q P T + T T +P+ + P + + T
Sbjct: 2104 --TTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVT 2161
Query: 238 RSPT 241
+PT
Sbjct: 2162 PTPT 2165
Score = 35.8 bits (81), Expect = 0.052
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 123 VSPAP-----QTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPR 177
V+P P QT P T + + T T Q PT+ P TT TP P
Sbjct: 2114 VTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP- 2172
Query: 178 LLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLST 237
+T + T + T T T +Q P T + T T +P+ + P + + T
Sbjct: 2173 --TTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVT 2230
Query: 238 RSPT 241
+PT
Sbjct: 2231 PTPT 2234
Score = 35.8 bits (81), Expect = 0.052
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 123 VSPAP-----QTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPR 177
V+P P QT P T + + T T Q PT+ P TT TP P
Sbjct: 2183 VTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP- 2241
Query: 178 LLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLST 237
+T + T + T T T +Q P T + T T +P+ + P + + T
Sbjct: 2242 --TTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVT 2299
Query: 238 RSPT 241
+PT
Sbjct: 2300 PTPT 2303
Score = 35.8 bits (81), Expect = 0.052
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 123 VSPAP-----QTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPR 177
V+P P QT P T + + T T Q PT+ P TT TP P
Sbjct: 2252 VTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP- 2310
Query: 178 LLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLST 237
+T + T + T T T +Q P T + T T +P+ + P + + T
Sbjct: 2311 --TTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVT 2368
Query: 238 RSPT 241
+PT
Sbjct: 2369 PTPT 2372
Score = 35.8 bits (81), Expect = 0.052
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 123 VSPAP-----QTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPR 177
V+P P QT P T + + T T Q PT+ P TT TP P
Sbjct: 2321 VTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP- 2379
Query: 178 LLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLST 237
+T + T + T T T +Q P T + T T +P+ + P + + T
Sbjct: 2380 --TTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVT 2437
Query: 238 RSPT 241
+PT
Sbjct: 2438 PTPT 2441
Score = 35.8 bits (81), Expect = 0.052
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 123 VSPAP-----QTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPR 177
V+P P QT P T + + T T Q PT+ P TT TP P
Sbjct: 2390 VTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP- 2448
Query: 178 LLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLST 237
+T + T + T T T +Q P T + T T +P+ + P + + T
Sbjct: 2449 --TTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVT 2506
Query: 238 RSPT 241
+PT
Sbjct: 2507 PTPT 2510
Score = 35.8 bits (81), Expect = 0.052
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 123 VSPAP-----QTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPR 177
V+P P QT P T + + T T Q PT+ P TT TP P
Sbjct: 2459 VTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP- 2517
Query: 178 LLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLST 237
+T + T + T T T +Q P T + T T +P+ + P + + T
Sbjct: 2518 --TTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVT 2575
Query: 238 RSPT 241
+PT
Sbjct: 2576 PTPT 2579
Score = 35.8 bits (81), Expect = 0.052
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 123 VSPAP-----QTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPR 177
V+P P QT P T + + T T Q PT+ P TT TP P
Sbjct: 2528 VTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP- 2586
Query: 178 LLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLST 237
+T + T + T T T +Q P T + T T +P+ + P + + T
Sbjct: 2587 --TTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVT 2644
Query: 238 RSPT 241
+PT
Sbjct: 2645 PTPT 2648
Score = 35.8 bits (81), Expect = 0.052
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 123 VSPAP-----QTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPR 177
V+P P QT P T + + T T Q PT+ P TT TP P
Sbjct: 2597 VTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP- 2655
Query: 178 LLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLST 237
+T + T + T T T +Q P T + T T +P+ + P + + T
Sbjct: 2656 --TTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVT 2713
Query: 238 RSPT 241
+PT
Sbjct: 2714 PTPT 2717
Score = 35.8 bits (81), Expect = 0.052
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 123 VSPAP-----QTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPR 177
V+P P QT P T + + T T Q PT+ P TT TP P
Sbjct: 2666 VTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP- 2724
Query: 178 LLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLST 237
+T + T + T T T +Q P T + T T +P+ + P + + T
Sbjct: 2725 --TTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVT 2782
Query: 238 RSPT 241
+PT
Sbjct: 2783 PTPT 2786
Score = 35.8 bits (81), Expect = 0.052
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 123 VSPAP-----QTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPR 177
V+P P QT P T + + T T Q PT+ P TT TP P
Sbjct: 2735 VTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP- 2793
Query: 178 LLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLST 237
+T + T + T T T +Q P T + T T +P+ + P + + T
Sbjct: 2794 --TTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVT 2851
Query: 238 RSPT 241
+PT
Sbjct: 2852 PTPT 2855
Score = 35.8 bits (81), Expect = 0.052
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 123 VSPAP-----QTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPR 177
V+P P QT P T + + T T Q PT+ P TT TP P
Sbjct: 2804 VTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP- 2862
Query: 178 LLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLST 237
+T + T + T T T +Q P T + T T +P+ + P + + T
Sbjct: 2863 --TTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVT 2920
Query: 238 RSPT 241
+PT
Sbjct: 2921 PTPT 2924
Score = 35.8 bits (81), Expect = 0.052
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 123 VSPAP-----QTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPR 177
V+P P QT P T + + T T Q PT+ P TT TP P
Sbjct: 2873 VTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP- 2931
Query: 178 LLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLST 237
+T + T + T T T +Q P T + T T +P+ + P + + T
Sbjct: 2932 --TTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVT 2989
Query: 238 RSPT 241
+PT
Sbjct: 2990 PTPT 2993
Score = 35.8 bits (81), Expect = 0.052
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 123 VSPAP-----QTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPR 177
V+P P QT P T + + T T Q PT+ P TT TP P
Sbjct: 2942 VTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP- 3000
Query: 178 LLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLST 237
+T + T + T T T +Q P T + T T +P+ + P + + T
Sbjct: 3001 --TTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVT 3058
Query: 238 RSPT 241
+PT
Sbjct: 3059 PTPT 3062
Score = 35.8 bits (81), Expect = 0.052
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 123 VSPAP-----QTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPR 177
V+P P QT P T + + T T Q PT+ P TT TP P
Sbjct: 3011 VTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP- 3069
Query: 178 LLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLST 237
+T + T + T T T +Q P T + T T +P+ + P + + T
Sbjct: 3070 --TTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVT 3127
Query: 238 RSPT 241
+PT
Sbjct: 3128 PTPT 3131
Score = 35.8 bits (81), Expect = 0.052
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 123 VSPAP-----QTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPR 177
V+P P QT P T + + T T Q PT+ P TT TP P
Sbjct: 3080 VTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP- 3138
Query: 178 LLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLST 237
+T + T + T T T +Q P T + T T +P+ + P + + T
Sbjct: 3139 --TTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVT 3196
Query: 238 RSPT 241
+PT
Sbjct: 3197 PTPT 3200
Score = 35.8 bits (81), Expect = 0.052
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 123 VSPAP-----QTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPR 177
V+P P QT P T + + T T Q PT+ P TT TP P
Sbjct: 3149 VTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP- 3207
Query: 178 LLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLST 237
+T + T + T T T +Q P T + T T +P+ + P + + T
Sbjct: 3208 --TTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVT 3265
Query: 238 RSPT 241
+PT
Sbjct: 3266 PTPT 3269
Score = 35.8 bits (81), Expect = 0.052
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 123 VSPAP-----QTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPR 177
V+P P QT P T + + T T Q PT+ P TT TP P
Sbjct: 3218 VTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP- 3276
Query: 178 LLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLST 237
+T + T + T T T +Q P T + T T +P+ + P + + T
Sbjct: 3277 --TTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVT 3334
Query: 238 RSPT 241
+PT
Sbjct: 3335 PTPT 3338
Score = 35.8 bits (81), Expect = 0.052
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 123 VSPAP-----QTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPR 177
V+P P QT P T + + T T Q PT+ P TT TP P
Sbjct: 3287 VTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP- 3345
Query: 178 LLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLST 237
+T + T + T T T +Q P T + T T +P+ + P + + T
Sbjct: 3346 --TTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVT 3403
Query: 238 RSPT 241
+PT
Sbjct: 3404 PTPT 3407
Score = 35.8 bits (81), Expect = 0.052
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 123 VSPAP-----QTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPR 177
V+P P QT P T + + T T Q PT+ P TT TP P
Sbjct: 3356 VTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP- 3414
Query: 178 LLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLST 237
+T + T + T T T +Q P T + T T +P+ + P + + T
Sbjct: 3415 --TTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVT 3472
Query: 238 RSPT 241
+PT
Sbjct: 3473 PTPT 3476
Score = 35.8 bits (81), Expect = 0.052
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 123 VSPAP-----QTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPR 177
V+P P QT P T + + T T Q PT+ P TT TP P
Sbjct: 3425 VTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP- 3483
Query: 178 LLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLST 237
+T + T + T T T +Q P T + T T +P+ + P + + T
Sbjct: 3484 --TTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVT 3541
Query: 238 RSPT 241
+PT
Sbjct: 3542 PTPT 3545
Score = 35.8 bits (81), Expect = 0.052
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 123 VSPAP-----QTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPR 177
V+P P QT P T + + T T Q PT+ P TT TP P
Sbjct: 3494 VTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP- 3552
Query: 178 LLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLST 237
+T + T + T T T +Q P T + T T +P+ + P + + T
Sbjct: 3553 --TTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVT 3610
Query: 238 RSPT 241
+PT
Sbjct: 3611 PTPT 3614
Score = 35.8 bits (81), Expect = 0.052
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 123 VSPAP-----QTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPR 177
V+P P QT P T + + T T Q PT+ P TT TP P
Sbjct: 3563 VTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP- 3621
Query: 178 LLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLST 237
+T + T + T T T +Q P T + T T +P+ + P + + T
Sbjct: 3622 --TTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVT 3679
Query: 238 RSPT 241
+PT
Sbjct: 3680 PTPT 3683
Score = 35.8 bits (81), Expect = 0.052
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 123 VSPAP-----QTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPR 177
V+P P QT P T + + T T Q PT+ P TT TP P
Sbjct: 3632 VTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP- 3690
Query: 178 LLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLST 237
+T + T + T T T +Q P T + T T +P+ + P + + T
Sbjct: 3691 --TTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVT 3748
Query: 238 RSPT 241
+PT
Sbjct: 3749 PTPT 3752
Score = 35.8 bits (81), Expect = 0.052
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 123 VSPAP-----QTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPR 177
V+P P QT P T + + T T Q PT+ P TT TP P
Sbjct: 3701 VTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP- 3759
Query: 178 LLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLST 237
+T + T + T T T +Q P T + T T +P+ + P + + T
Sbjct: 3760 --TTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVT 3817
Query: 238 RSPT 241
+PT
Sbjct: 3818 PTPT 3821
Score = 35.8 bits (81), Expect = 0.052
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 123 VSPAP-----QTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPR 177
V+P P QT P T + + T T Q PT+ P TT TP P
Sbjct: 3770 VTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP- 3828
Query: 178 LLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLST 237
+T + T + T T T +Q P T + T T +P+ + P + + T
Sbjct: 3829 --TTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVT 3886
Query: 238 RSPT 241
+PT
Sbjct: 3887 PTPT 3890
Score = 35.8 bits (81), Expect = 0.052
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 123 VSPAP-----QTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPR 177
V+P P QT P T + + T T Q PT+ P TT TP P
Sbjct: 3839 VTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP- 3897
Query: 178 LLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLST 237
+T + T + T T T +Q P T + T T +P+ + P + + T
Sbjct: 3898 --TTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVT 3955
Query: 238 RSPT 241
+PT
Sbjct: 3956 PTPT 3959
Score = 35.8 bits (81), Expect = 0.052
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 123 VSPAP-----QTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPR 177
V+P P QT P T + + T T Q PT+ P TT TP P
Sbjct: 3908 VTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP- 3966
Query: 178 LLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLST 237
+T + T + T T T +Q P T + T T +P+ + P + + T
Sbjct: 3967 --TTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVT 4024
Query: 238 RSPT 241
+PT
Sbjct: 4025 PTPT 4028
Score = 35.8 bits (81), Expect = 0.052
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 123 VSPAP-----QTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPR 177
V+P P QT P T + + T T Q PT+ P TT TP P
Sbjct: 3977 VTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP- 4035
Query: 178 LLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLST 237
+T + T + T T T +Q P T + T T +P+ + P + + T
Sbjct: 4036 --TTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVT 4093
Query: 238 RSPT 241
+PT
Sbjct: 4094 PTPT 4097
Score = 35.8 bits (81), Expect = 0.052
Identities = 33/124 (26%), Positives = 48/124 (38%), Gaps = 8/124 (6%)
Query: 123 VSPAP-----QTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPR 177
V+P P QT P T + + T T Q PT+ P TT TP P
Sbjct: 4046 VTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP- 4104
Query: 178 LLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLST 237
+T + T + T T T +Q P T + T T +P+ + P + + T
Sbjct: 4105 --TTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVT 4162
Query: 238 RSPT 241
+PT
Sbjct: 4163 PTPT 4166
Score = 33.9 bits (76), Expect = 0.20
Identities = 33/119 (27%), Positives = 47/119 (39%), Gaps = 11/119 (9%)
Query: 124 SPAPQTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTR 183
+P P T + P T + TT PT+ P P TT TP T P +T
Sbjct: 1493 TPPPTTTPSPPTT---TPITPPASTTTLPPTTTPSPPTTTTT---TPPPTTTPSPPTTTP 1546
Query: 184 PASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLSTRSPTT 242
T + +TT P T + T +PS ++ P +I+T +T PTT
Sbjct: 1547 ITPPTSTTTLPPTTTPSPPPTTTTTPPPTTTPSPPTTTTPSPPTITT-----TTPPPTT 1600
Score = 33.9 bits (76), Expect = 0.20
Identities = 33/114 (28%), Positives = 47/114 (41%), Gaps = 13/114 (11%)
Query: 124 SPAPQTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTR 183
+P P T + P T + T TT PT+ P P TT TP T P +T
Sbjct: 1611 TPPPTTTPSPPTT---TPITPPTSTTTLPPTTTPSPPPTTTT---TPPPTTTPSPPTTTT 1664
Query: 184 PASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLST 237
P+ T+TT+ P T S +T +PS + P +T S ++T
Sbjct: 1665 PSPPI------TTTTTP-PPTTTPSSPITTTPSPPTTTMTTPSPTTTPSSPITT 1711
Score = 33.9 bits (76), Expect = 0.20
Identities = 31/118 (26%), Positives = 46/118 (38%), Gaps = 5/118 (4%)
Query: 124 SPAPQTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTR 183
+P P T P T + + T T Q PT+ P TT TP P +T
Sbjct: 1892 NPTPPT--TTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP---TTTP 1946
Query: 184 PASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLSTRSPT 241
+ T + T T T +Q P T + T T +P+ + P + + T +PT
Sbjct: 1947 ITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPT 2004
Score = 33.1 bits (74), Expect = 0.34
Identities = 27/96 (28%), Positives = 37/96 (38%), Gaps = 10/96 (10%)
Query: 147 VTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPASKTGYSFTATSTTSQGPRRTM 206
+TT PT+ P P T P P +T P T S T+TT+ P
Sbjct: 1396 ITTPSPPTTTPSPP-PTSTTTLPPTTTPSPPTTTTTTPPPTTTPSPPITTTTTPPP---- 1450
Query: 207 GSQTVTASPSNARDSSAGPESISTKSGDLSTRSPTT 242
T +PS ++ P +T S +T SP T
Sbjct: 1451 -----TTTPSPPISTTTTPPPTTTPSPPTTTPSPPT 1481
Score = 32.7 bits (73), Expect = 0.44
Identities = 27/97 (27%), Positives = 37/97 (38%), Gaps = 3/97 (3%)
Query: 146 TVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPASKTGYSFTATSTTSQGPRRT 205
T TT PT+ P P +T TP T P +T T S T+TT+ P T
Sbjct: 1443 TTTTTPPPTTTPSPPISTTT---TPPPTTTPSPPTTTPSPPTTTPSPPTTTTTTPPPTTT 1499
Query: 206 MGSQTVTASPSNARDSSAGPESISTKSGDLSTRSPTT 242
T T A ++ P + + +T P T
Sbjct: 1500 PSPPTTTPITPPASTTTLPPTTTPSPPTTTTTTPPPT 1536
Score = 32.7 bits (73), Expect = 0.44
Identities = 27/97 (27%), Positives = 37/97 (38%), Gaps = 9/97 (9%)
Query: 146 TVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPASKTGYSFTATSTTSQGPRRT 205
T TT PT+ P P TT TP P + +T P T S T+TT+ P T
Sbjct: 1567 TTTTTPPPTTTPSPPTTT-----TPS----PPTITTTTPPPTTTPSPPTTTTTTPPPTTT 1617
Query: 206 MGSQTVTASPSNARDSSAGPESISTKSGDLSTRSPTT 242
T T ++ P + + +T P T
Sbjct: 1618 PSPPTTTPITPPTSTTTLPPTTTPSPPPTTTTTPPPT 1654
Score = 31.6 bits (70), Expect = 0.99
Identities = 25/96 (26%), Positives = 38/96 (39%)
Query: 146 TVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPASKTGYSFTATSTTSQGPRRT 205
T TT + PT P TT V T + +T + T + T T T +Q P T
Sbjct: 1886 TTTTTENPTPPTTTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTTT 1945
Query: 206 MGSQTVTASPSNARDSSAGPESISTKSGDLSTRSPT 241
+ T T +P+ + P + + T +PT
Sbjct: 1946 PITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPT 1981
Score = 30.8 bits (68), Expect = 1.7
Identities = 31/121 (25%), Positives = 43/121 (35%), Gaps = 7/121 (5%)
Query: 124 SPAPQTERNIPF----THLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLL 179
+P P T + P T S TT PT+ P P TT TP T P
Sbjct: 1447 TPPPTTTPSPPISTTTTPPPTTTPSPPTTTPSPPTTTPSPPTTTTT---TPPPTTTPSPP 1503
Query: 180 ASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLSTRS 239
+T + +TT P T + T +PS + P + +T +T S
Sbjct: 1504 TTTPITPPASTTTLPPTTTPSPPTTTTTTPPPTTTPSPPTTTPITPPTSTTTLPPTTTPS 1563
Query: 240 P 240
P
Sbjct: 1564 P 1564
>gi|226498466 T-cell immunoglobulin and mucin domain containing 4
isoform 2 [Homo sapiens]
Length = 350
Score = 41.6 bits (96), Expect = 0.001
Identities = 67/312 (21%), Positives = 117/312 (37%), Gaps = 37/312 (11%)
Query: 21 SADSVYTKVRLLEGETLSVQCSYKGYKNRVEGKVWCKIR--KKKCEPGFARV------WV 72
++++V T+V G +++ C Y + + W K + C+ R
Sbjct: 23 TSETVVTEVL---GHRVTLPCLYSSWSHNSNSMCWGKDQCPYSGCKEALIRTDGMRVTSR 79
Query: 73 KGPRYLLQDDAQAKVVNITMVALKLQDSGRYWCMRNTSGILYPL-MGFQLDVSPAPQTER 131
K +Y LQ V++T++ DSG Y C G + + +L++ A T
Sbjct: 80 KSAKYRLQGTIPRGDVSLTILNPSESDSGVYCCRIEVPGWFNDVKINVRLNLQRASTTTH 139
Query: 132 NIPFTHLDNILKSGTVTTGQAPTSGPDAPFT---------------TGVMVFTPGLITLP 176
T + TT Q T+ P T T + VFT L
Sbjct: 140 RTATTTTRRTTTTSPTTTRQMTTTPAALPTTVVTTPDLTTGTPLQMTTIAVFTTANTCL- 198
Query: 177 RLLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASP--SNARDSSAGPESISTKSGD 234
L ST P TG + +GP T S+TV S S+ +SA +++K+ D
Sbjct: 199 SLTPSTLPEEATG--LLTPEPSKEGPILTAESETVLPSDSWSSVESTSADTVLLTSKASD 256
Query: 235 LSTRSPTTGLCLTSRSLLNRLPSMPSIRHQDVYSTVLGVVLTLLVLMLIMVYGFWKKRHM 294
+ T ++ +P S++++ S +L ++ L +L ++ + R
Sbjct: 257 TAVPEQNK---TTKTGQMDGIPM--SMKNEMPISQLLMIIAPSLGFVLFALFVAFLLRGK 311
Query: 295 ASYSMCSDPSTR 306
+ CS TR
Sbjct: 312 LMETYCSQKHTR 323
>gi|169646348 CD300 molecule-like family member d [Homo sapiens]
Length = 194
Score = 40.8 bits (94), Expect = 0.002
Identities = 41/138 (29%), Positives = 62/138 (44%), Gaps = 19/138 (13%)
Query: 1 MAPAFLLLLLLWPQ--GCVSGPSADSVYTKVRLLEGETLSVQCSYKG-----YKNRVEGK 53
++P+ LLL+L ++GP T V E +L+VQC+Y K R +G
Sbjct: 3 LSPSLLLLILPGYSIAAKITGP------TTVNGSEQGSLTVQCAYGSGWETYLKWRCQGA 56
Query: 54 VW--CKIRKKKCEPGFARVWVKGPRYLLQDDAQAKVVNITMVALKLQDSGRYWCMRNTSG 111
W C I K + VK R ++D+ + V +TM LK D+ YWC G
Sbjct: 57 DWNYCNILVKT---NGSEQEVKKNRVSIRDNQKNHVFTVTMENLKRDDADSYWCGTERPG 113
Query: 112 ILYPLMGFQLDVSPAPQT 129
I + Q+ ++P QT
Sbjct: 114 IDLGVK-VQVTINPGTQT 130
>gi|30794266 triggering receptor expressed on myeloid cells-like 1
[Homo sapiens]
Length = 311
Score = 40.0 bits (92), Expect = 0.003
Identities = 34/111 (30%), Positives = 52/111 (46%), Gaps = 11/111 (9%)
Query: 1 MAPAFLLLLLLWPQGC-VSGPSADSVYTKVRLLEGETLSVQCSYKGYKNRVEGKVWCKIR 59
M LLLLLL +G + G + + V G ++ VQC Y+ + + KVWC+
Sbjct: 1 MGLTLLLLLLLGLEGQGIVGSLPEVLQAPV----GSSILVQCHYRLQDVKAQ-KVWCRFL 55
Query: 60 KKKCEP----GFARVWVKGPRYLLQDDAQAKVVNITMVALKLQDSGRYWCM 106
+ C+P R G R L D ++ + MV L+ +D+G Y CM
Sbjct: 56 PEGCQPLVSSAVDRRAPAGRRTFLTD-LGGGLLQVEMVTLQEEDAGEYGCM 105
>gi|5729776 CD300C antigen [Homo sapiens]
Length = 224
Score = 39.7 bits (91), Expect = 0.004
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 8/108 (7%)
Query: 34 GETLSVQCSYKGYKNRVEGKVWCK----IRKKKCEPGFARVWVKGPRYLLQDDAQAKVVN 89
G +LSVQC Y+ ++R K WC+ +R K + R ++D
Sbjct: 36 GGSLSVQCRYEK-EHRTLNKFWCRPPQILRCDKIVETKGSAGKRNGRVSIRDSPANLSFT 94
Query: 90 ITMVALKLQDSGRYWCMRNTSGIL---YPLMGFQLDVSPAPQTERNIP 134
+T+ L +D+G YWC +T + P++ ++ V PA T + P
Sbjct: 95 VTLENLTEEDAGTYWCGVDTPWLRDFHDPIVEVEVSVFPAGTTTASSP 142
>gi|239749951 PREDICTED: similar to mucin 2 [Homo sapiens]
Length = 2639
Score = 39.3 bits (90), Expect = 0.005
Identities = 37/126 (29%), Positives = 53/126 (42%), Gaps = 10/126 (7%)
Query: 123 VSPAP-----QTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPR 177
V+P P QT + P T + + T T Q PT+ P TT TP P
Sbjct: 1391 VTPTPTPTGTQTPTSTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQAPT 1450
Query: 178 LLASTRPASKTGYSFTATSTTSQGPRRT--MGSQTVTASPSNARDSSAGPESISTKSGDL 235
A T ++ T T T T +Q P T + TVT +P+ + P +I+T +
Sbjct: 1451 PTAITTTSTVTP---TPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPTPTAITTTTTVT 1507
Query: 236 STRSPT 241
T +PT
Sbjct: 1508 PTPTPT 1513
Score = 38.9 bits (89), Expect = 0.006
Identities = 38/127 (29%), Positives = 55/127 (43%), Gaps = 8/127 (6%)
Query: 123 VSPAP-----QTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTP-GLITLP 176
V+P P QT P + + + T T Q PT+ P TT TP G T
Sbjct: 1529 VTPTPTPTGTQTPTPTPISTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTPT 1588
Query: 177 RLLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLS 236
+L +T + T+T +T+ P T + TVTA+P+ + IST +
Sbjct: 1589 TVLITTTTTMTPTPTPTSTKSTTVTPITT--TTTVTATPTPTGTQTPTMIPISTTTTVTP 1646
Query: 237 TRSPTTG 243
T +PTTG
Sbjct: 1647 TPTPTTG 1653
Score = 38.1 bits (87), Expect = 0.011
Identities = 38/141 (26%), Positives = 57/141 (40%), Gaps = 16/141 (11%)
Query: 123 VSPAP-----QTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPR 177
V+P P QT + P T + + T T Q PT P + TT TP P
Sbjct: 1506 VTPTPTPTGTQTPTSTPITTTTTVTPTPTPTGTQTPTPTPISTTTTVTPTPTPTGTQTP- 1564
Query: 178 LLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLST 237
+T + T + T T T +Q P + + T T +P+ P STKS ++
Sbjct: 1565 --TTTPITTTTTVTPTPTPTGTQTPTTVLITTTTTMTPT--------PTPTSTKSTTVTP 1614
Query: 238 RSPTTGLCLTSRSLLNRLPSM 258
+ TT + T + P+M
Sbjct: 1615 ITTTTTVTATPTPTGTQTPTM 1635
Score = 33.9 bits (76), Expect = 0.20
Identities = 38/147 (25%), Positives = 59/147 (40%), Gaps = 15/147 (10%)
Query: 123 VSPAP-----QTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPR 177
V+P P Q+ P T + + T T Q PT+ P TT TP P
Sbjct: 1322 VTPTPTPTSTQSTTPTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQTP- 1380
Query: 178 LLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPES--ISTKSGDL 235
+T + T + T T T +Q P T + T T +P+ + P + I+T +
Sbjct: 1381 --TTTPITTTTTVTPTPTPTGTQTPTSTPITTTTTVTPTPTPTGTQTPTTTPITTTTTVT 1438
Query: 236 STRSPT-----TGLCLTSRSLLNRLPS 257
T +PT T +T+ S + P+
Sbjct: 1439 PTPTPTGTQAPTPTAITTTSTVTPTPT 1465
Score = 33.1 bits (74), Expect = 0.34
Identities = 37/126 (29%), Positives = 53/126 (42%), Gaps = 10/126 (7%)
Query: 123 VSPAP-----QTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPR 177
V+P P QT P T + + T T QAPT P A TT + TP T +
Sbjct: 1414 VTPTPTPTGTQTPTTTPITTTTTVTPTPTPTGTQAPT--PTAITTTSTVTPTP-TPTGTQ 1470
Query: 178 LLASTRPASKTGYSFTATSTTSQGPRRTM--GSQTVTASPSNARDSSAGPESISTKSGDL 235
+T + T + T T T +Q P T + TVT +P+ + I+T +
Sbjct: 1471 TPTTTPITTTTTVTPTPTPTGTQTPTPTAITTTTTVTPTPTPTGTQTPTSTPITTTTTVT 1530
Query: 236 STRSPT 241
T +PT
Sbjct: 1531 PTPTPT 1536
Score = 32.3 bits (72), Expect = 0.58
Identities = 32/119 (26%), Positives = 45/119 (37%), Gaps = 7/119 (5%)
Query: 124 SPAPQTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTR 183
+P P T P TH + T+ P S T T +T L ST
Sbjct: 1647 TPTPTTGSTGPPTHTSTAPIAELTTSNPPPESS-----TPQTSRSTSSPLTESTTLLSTL 1701
Query: 184 PASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLSTRSPTT 242
P + + TA +T P T G T++ PS S G + T +G S +P+T
Sbjct: 1702 PPA-IEMTSTAPPSTPTAPTTTSGGHTLSPPPSTT-TSPPGTPTRGTTTGSSSAPTPST 1758
>gi|7657570 sialic acid binding Ig-like lectin 7 isoform 1 [Homo
sapiens]
Length = 467
Score = 39.3 bits (90), Expect = 0.005
Identities = 41/164 (25%), Positives = 65/164 (39%), Gaps = 26/164 (15%)
Query: 6 LLLLLLWPQGCVSGPSAD------SVYTKVRLLEGETLSVQCSYK-------------GY 46
LLL LLW + V G ++ ++ + V + EG + V+CS+ GY
Sbjct: 5 LLLPLLWGRERVEGQKSNRKDYSLTMQSSVTVQEGMCVHVRCSFSYPVDSQTDSDPVHGY 64
Query: 47 KNRVEGKVWCKIRKKKCEPGFARVWVKGPRYLLQDDAQAKVVNITMVALKLQDSGRYWCM 106
R + K P +A R+ L D Q K +++ ++ D+GRY+
Sbjct: 65 WFRAGNDISWKAPVATNNPAWAVQEETRDRFHLLGDPQTKNCTLSIRDARMSDAGRYFFR 124
Query: 107 RNTSGILYPLMGFQLDVSPAPQTERNIPFTHLDNILKSGTVTTG 150
I + QL V+ TH NIL GT+ +G
Sbjct: 125 MEKGNIKWNYKYDQLSVNVT-------ALTHRPNILIPGTLESG 161
>gi|161019170 mucin 5AC [Homo sapiens]
Length = 6207
Score = 38.5 bits (88), Expect = 0.008
Identities = 31/102 (30%), Positives = 43/102 (42%), Gaps = 7/102 (6%)
Query: 126 APQTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPA 185
+P T R + IL + +T TS A T+ TP L +S P+
Sbjct: 3991 SPHTVRTAWTSATSGILGTTHITEPSTVTSHTPAATTSTTQHSTPAL-------SSPHPS 4043
Query: 186 SKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPES 227
S+T S + TT+ G R T TA+PS R S+ P S
Sbjct: 4044 SRTTESPPSPGTTTPGHTRGTSRTTATATPSKTRTSTLLPSS 4085
Score = 37.4 bits (85), Expect = 0.018
Identities = 38/100 (38%), Positives = 48/100 (48%), Gaps = 11/100 (11%)
Query: 146 TVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPASKTGYSFTATSTTSQGPRRT 205
T T TS PF++ PG T L ST + T SFTA ++S G T
Sbjct: 3136 TTATTPTVTSSKATPFSS------PGTATALPALRSTA-TTPTATSFTAIPSSSLGTTWT 3188
Query: 206 MGSQTV--TASPSNARDSSAGPESISTKSGDLSTRSPTTG 243
SQT TA+ S A SS PE++ T S L+T + TTG
Sbjct: 3189 RLSQTTTPTATMSTATPSST-PETVHT-STVLTTTATTTG 3226
Score = 36.2 bits (82), Expect = 0.040
Identities = 30/102 (29%), Positives = 41/102 (40%), Gaps = 7/102 (6%)
Query: 126 APQTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPA 185
+P T R + L + +T TS A T TP L +S P+
Sbjct: 3346 SPHTVRTAWTSATSGTLGTTHITEPSTGTSHTPAATTGTTQHSTPAL-------SSPHPS 3398
Query: 186 SKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPES 227
S+T S + TT+ G R T TA+PS R S+ P S
Sbjct: 3399 SRTTESPPSPGTTTPGHTRATSRTTATATPSKTRTSTLLPSS 3440
Score = 35.8 bits (81), Expect = 0.052
Identities = 33/132 (25%), Positives = 51/132 (38%), Gaps = 12/132 (9%)
Query: 123 VSPAPQTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTP------GLITLP 176
V+P P + +T L + P+S P+ T+ V+ T G + P
Sbjct: 2673 VTPIPSSSLGTTWTRLSQTTTPTATMSTATPSSTPETAHTSTVLTATATTTGATGSVATP 2732
Query: 177 RLLASTRPASK----TGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESI--ST 230
T +K T FTAT ++S G T T + R S+ P SI +T
Sbjct: 2733 SSTPGTAHTTKVPTTTTTGFTATPSSSPGTALTPPVWISTTTTPTTRGSTVTPSSIPGTT 2792
Query: 231 KSGDLSTRSPTT 242
+ + T + TT
Sbjct: 2793 HTATVLTTTTTT 2804
Score = 35.0 bits (79), Expect = 0.089
Identities = 36/154 (23%), Positives = 56/154 (36%), Gaps = 20/154 (12%)
Query: 127 PQTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTP------GLITLPRLLA 180
P + +T L + P+S P+ T+ V+ T G + P
Sbjct: 3179 PSSSLGTTWTRLSQTTTPTATMSTATPSSTPETVHTSTVLTTTATTTGATGSVATPSSTP 3238
Query: 181 STRPASK----TGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESI-------- 228
T +K T FTAT ++S G RT+ T + R S+ P SI
Sbjct: 3239 GTAHTTKVLTTTTTGFTATPSSSPGTARTLPVWISTTTTPTTRGSTVTPSSIPGTTHTPT 3298
Query: 229 --STKSGDLSTRSPTTGLCLTSRSLLNRLPSMPS 260
+T + ++T S T T S P +P+
Sbjct: 3299 VLTTTTTTVATGSMATPSSSTQTSGTTHTPPVPN 3332
Score = 35.0 bits (79), Expect = 0.089
Identities = 39/120 (32%), Positives = 53/120 (44%), Gaps = 17/120 (14%)
Query: 126 APQTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPA 185
A T+ H+ + TVT+ +A S +PG T L ST
Sbjct: 4942 ASSTQATAGTPHVSTTATTPTVTSSKATPSS------------SPGTATALPALRSTA-T 4988
Query: 186 SKTGYSFTATSTTSQGPRRTMGSQTV--TASPSNARDSSAGPESISTKSGDLSTRSPTTG 243
+ T SFTA ++S G T SQT TA+ S A SS PE++ T S L+ + TTG
Sbjct: 4989 TPTATSFTAIPSSSLGTTWTRLSQTTTPTATMSTATPSST-PETVHT-STVLTATATTTG 5046
Score = 34.7 bits (78), Expect = 0.12
Identities = 30/102 (29%), Positives = 41/102 (40%), Gaps = 7/102 (6%)
Query: 126 APQTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPA 185
+P T R + IL + +T TS A T TP L +S P+
Sbjct: 2844 SPHTVRTAWTSATSGILGTTHITEPSTVTSHTLAATTGTTQHSTPAL-------SSPHPS 2896
Query: 186 SKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPES 227
S+T S + TT+ G T TA+PS R S+ P S
Sbjct: 2897 SRTTESPPSPGTTTPGHTTATSRTTATATPSKTRTSTLLPSS 2938
Score = 33.9 bits (76), Expect = 0.20
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 20/117 (17%)
Query: 146 TVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPASKTGYSFTATSTTSQG---- 201
T T TS PF++ PG T L ST + T SFTA ++S G
Sbjct: 4283 TTATTPTVTSSKATPFSS------PGTATALPALRSTA-TTPTATSFTAIPSSSLGTTWT 4335
Query: 202 -------PRRTMGSQTVTASPSNARDSSAGPESIST--KSGDLSTRSPTTGLCLTSR 249
P TM + T +++P A S+ + +T +G ++T S T G T++
Sbjct: 4336 RLSQTTTPTATMSTATPSSTPETAHTSTVLTTTATTTRATGSVATPSSTPGTAHTTK 4392
Score = 33.9 bits (76), Expect = 0.20
Identities = 29/102 (28%), Positives = 40/102 (39%), Gaps = 7/102 (6%)
Query: 126 APQTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPA 185
+P T R + L + +T TS A T TP L +S P+
Sbjct: 4493 SPHTVRTAWTSATSGTLGTTHITEPSTGTSHTPAATTGTTQHSTPAL-------SSPHPS 4545
Query: 186 SKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPES 227
S+T S + TT+ G T TA+PS R S+ P S
Sbjct: 4546 SRTTESPPSPGTTTPGHTTATSRTTATATPSKTRTSTLLPSS 4587
Score = 32.3 bits (72), Expect = 0.58
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 170 PGLITLPRLLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESIS 229
PG P L AST PA T TAT T+ ++ S TA+ ++ SS+GP +++
Sbjct: 2131 PGTSPQPSLSASTEPAVPTPTQTTATEKTTLWVTPSIRS---TAALTSQTGSSSGPVTVT 2187
Query: 230 TKSGDLSTRSP 240
+ +T P
Sbjct: 2188 PSAPGTTTCQP 2198
Score = 32.3 bits (72), Expect = 0.58
Identities = 32/132 (24%), Positives = 50/132 (37%), Gaps = 12/132 (9%)
Query: 123 VSPAPQTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTP------GLITLP 176
V+ P + +T L + P+S P+ T+ V+ T G + P
Sbjct: 3820 VTAIPSSSLGTAWTRLSQTTTPTATMSTATPSSTPETVHTSTVLTTTTTTTRATGSVATP 3879
Query: 177 RLLASTRPASK----TGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESI--ST 230
T +K T FTAT ++S G T T + R S+ P SI +T
Sbjct: 3880 SSTPGTAHTTKVPTTTTTGFTATPSSSPGTALTPPVWISTTTTPTTRGSTVTPSSIPGTT 3939
Query: 231 KSGDLSTRSPTT 242
+ + T + TT
Sbjct: 3940 HTATVLTTTTTT 3951
Score = 32.0 bits (71), Expect = 0.76
Identities = 34/154 (22%), Positives = 58/154 (37%), Gaps = 20/154 (12%)
Query: 127 PQTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTP------GLITLPRLLA 180
P + +T L + P+S P+ T+ V+ T G + P
Sbjct: 4326 PSSSLGTTWTRLSQTTTPTATMSTATPSSTPETAHTSTVLTTTATTTRATGSVATPSSTP 4385
Query: 181 STRPASK----TGYSFTATSTTSQGPRRT----MGSQTV------TASPSNARDSSAGPE 226
T +K T FT T ++S G RT + + T T +PS+ ++ P
Sbjct: 4386 GTAHTTKVPTTTTTGFTVTPSSSPGTARTPPVWISTTTTPTTSGSTVTPSSVPGTTHTPT 4445
Query: 227 SISTKSGDLSTRSPTTGLCLTSRSLLNRLPSMPS 260
++T + ++T S T T S P +P+
Sbjct: 4446 VLTTTTTTVATGSMATPSSSTQTSGTTHTPPVPN 4479
Score = 32.0 bits (71), Expect = 0.76
Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 3/113 (2%)
Query: 138 LDNILKSGTVTTGQAPTSGPDA-PFTTGVMV--FTPGLITLPRLLASTRPASKTGYSFTA 194
L + + T T T+ P + P TT ++ T +T+P +T +++
Sbjct: 4894 LTELTTTATTTASTGSTATPSSTPGTTWILTEPSTTATVTVPTGSTATASSTQATAGTPH 4953
Query: 195 TSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLSTRSPTTGLCLT 247
STT+ P T T ++SP A A + +T + T P++ L T
Sbjct: 4954 VSTTATTPTVTSSKATPSSSPGTATALPALRSTATTPTATSFTAIPSSSLGTT 5006
Score = 31.6 bits (70), Expect = 0.99
Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 10/104 (9%)
Query: 138 LDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPASKTGYSFTATST 197
L + + T T T+ P + TPG P++L S + T S ATS+
Sbjct: 4723 LTELTTTATTTASTGSTATPSS---------TPGTAPPPKVLTSPA-TTPTATSSKATSS 4772
Query: 198 TSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLSTRSPT 241
+S T+ T TA+ S A + P S +G L ++ T
Sbjct: 4773 SSPRTATTLPVLTSTATKSTATSVTPIPSSTLGTTGTLPEQTTT 4816
Score = 30.4 bits (67), Expect = 2.2
Identities = 35/115 (30%), Positives = 42/115 (36%), Gaps = 10/115 (8%)
Query: 150 GQAPTSGPDAPFTTGVMVFTPGLITLPRLLAS---TR--PASKTGYSFTATSTTSQGPRR 204
G+A T P T T L + P+ +S TR PAS T + TS PR
Sbjct: 2298 GRATTPPPTTELETATTTTTQALFSTPQPTSSPGLTRAPPASTTAVPTLSEGLTS--PRY 2355
Query: 205 TMGSQTVTASPSNARDSSAGPESISTKSGDLSTRSPTTGLCLTSRSLLNRLPSMP 259
T T T S P + L TRS G T+ SL PS P
Sbjct: 2356 TSTLGTATTGGPTTPAGSTEPTVPGVATSTLPTRSALPG---TTGSLGTWRPSQP 2407
Score = 30.4 bits (67), Expect = 2.2
Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 3/113 (2%)
Query: 138 LDNILKSGTVTTGQAPTSGPDA-PFTTGVMV--FTPGLITLPRLLASTRPASKTGYSFTA 194
L + + T T T+ P + P TT ++ T +T+P +T +++
Sbjct: 3074 LTELTTTATTTESTGSTATPSSTPGTTWILTEPSTTATVTVPTGSTATASSTQATAGTPH 3133
Query: 195 TSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLSTRSPTTGLCLT 247
STT+ P T T +SP A A + +T + T P++ L T
Sbjct: 3134 VSTTATTPTVTSSKATPFSSPGTATALPALRSTATTPTATSFTAIPSSSLGTT 3186
Score = 30.4 bits (67), Expect = 2.2
Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 3/113 (2%)
Query: 138 LDNILKSGTVTTGQAPTSGPDA-PFTTGVMV--FTPGLITLPRLLASTRPASKTGYSFTA 194
L + + T T T+ P + P TT ++ T +T+P +T +++
Sbjct: 4221 LTKLTTTATTTESTGSTATPSSTPGTTWILTEPSTTATVTVPTGSTATASSTQATAGTPH 4280
Query: 195 TSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLSTRSPTTGLCLT 247
STT+ P T T +SP A A + +T + T P++ L T
Sbjct: 4281 VSTTATTPTVTSSKATPFSSPGTATALPALRSTATTPTATSFTAIPSSSLGTT 4333
Score = 30.0 bits (66), Expect = 2.9
Identities = 33/122 (27%), Positives = 50/122 (40%), Gaps = 17/122 (13%)
Query: 136 THLDNILKS-GTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPASKTGYSFTA 194
TH +L + T T + TS P + T G L T A+T P TA
Sbjct: 4833 THTSTVLTTKATTTRATSSTSTPSS--TPGTTWILTELTTAATTTAATGP--------TA 4882
Query: 195 TSTTSQGPRRTMGSQTVTASPSNARDSSAGPES------ISTKSGDLSTRSPTTGLCLTS 248
T +++ G + T TA+ + + S+A P S I T+ +T + TG T+
Sbjct: 4883 TPSSTPGTTWILTELTTTATTTASTGSTATPSSTPGTTWILTEPSTTATVTVPTGSTATA 4942
Query: 249 RS 250
S
Sbjct: 4943 SS 4944
Score = 29.3 bits (64), Expect = 4.9
Identities = 27/118 (22%), Positives = 53/118 (44%), Gaps = 11/118 (9%)
Query: 146 TVTTGQAPTSGPDAPFT--TGVMVFTPGLITLPRLLASTRPASKTGYSFTATSTTSQGPR 203
T+ T + P +P T T T G++ + T P++ T ++ AT+ T+Q
Sbjct: 2831 TMATTHGRSLPPSSPHTVRTAWTSATSGILGTTHI---TEPSTVTSHTLAATTGTTQ--- 2884
Query: 204 RTMGSQTVTASPSNARDSSAGPESISTKSGDLSTRSPTTGLCLTSRSLLNR-LPSMPS 260
+ +++ ++R + + P +T G + S TT S++ + LPS P+
Sbjct: 2885 --HSTPALSSPHPSSRTTESPPSPGTTTPGHTTATSRTTATATPSKTRTSTLLPSSPT 2940
Score = 28.9 bits (63), Expect = 6.4
Identities = 30/98 (30%), Positives = 45/98 (45%), Gaps = 9/98 (9%)
Query: 144 SGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPASKTGYSFTATSTTSQGPR 203
+ TV T A T+G TG V TP + P +T+ + T FTAT ++S G
Sbjct: 5034 TSTVLTATATTTG-----ATG-SVATPS--STPGTAHTTKVPTTTTTGFTATPSSSPGTA 5085
Query: 204 RTMGSQTVTASPSNARDSSAGPESISTKSGDLSTRSPT 241
T + T ++ S SS PE+ T + +T + T
Sbjct: 5086 LTPPTTTPMSTMSTIHTSST-PETTHTSTVLTTTATMT 5122
>gi|153085429 hepatitis A virus cellular receptor 1 [Homo sapiens]
Length = 364
Score = 38.5 bits (88), Expect = 0.008
Identities = 56/236 (23%), Positives = 92/236 (38%), Gaps = 34/236 (14%)
Query: 22 ADSVYTKVRL--LEGETLSVQCSYKGYKNRVEGKVW----CKIRKKKCEPGFARVWVKGP 75
ADSV V++ G ++++ C Y G V W C + C+ G VW G
Sbjct: 15 ADSVAGSVKVGGEAGPSVTLPCHYSG---AVTSMCWNRGSCSLFT--CQNGI--VWTNGT 67
Query: 76 --------RYLLQDDAQAKVVNITMVALKLQDSGRYWCMRNTSGILYPL-MGFQLDVSPA 126
RY L D + V++T+ + DSG Y C G + + L++ P
Sbjct: 68 HVTYRKDTRYKLLGDLSRRDVSLTIENTAVSDSGVYCCRVEHRGWFNDMKITVSLEIVPP 127
Query: 127 PQTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPAS 186
T I + TVTT + T+ P TT V + T T+P ++ P +
Sbjct: 128 KVTTTPI-------VTTVPTVTTVRTSTT---VPTTTTVPMTTVPTTTVPTTMSI--PTT 175
Query: 187 KTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLSTRSPTT 242
T + STT+ P T T + + + P + ++ + SP++
Sbjct: 176 TTVLTTMTVSTTTSVPTTTSIPTTTSVPVTTTVSTFVPPMPLPRQNHEPVATSPSS 231
>gi|153085427 hepatitis A virus cellular receptor 1 [Homo sapiens]
Length = 364
Score = 38.5 bits (88), Expect = 0.008
Identities = 56/236 (23%), Positives = 92/236 (38%), Gaps = 34/236 (14%)
Query: 22 ADSVYTKVRL--LEGETLSVQCSYKGYKNRVEGKVW----CKIRKKKCEPGFARVWVKGP 75
ADSV V++ G ++++ C Y G V W C + C+ G VW G
Sbjct: 15 ADSVAGSVKVGGEAGPSVTLPCHYSG---AVTSMCWNRGSCSLFT--CQNGI--VWTNGT 67
Query: 76 --------RYLLQDDAQAKVVNITMVALKLQDSGRYWCMRNTSGILYPL-MGFQLDVSPA 126
RY L D + V++T+ + DSG Y C G + + L++ P
Sbjct: 68 HVTYRKDTRYKLLGDLSRRDVSLTIENTAVSDSGVYCCRVEHRGWFNDMKITVSLEIVPP 127
Query: 127 PQTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPAS 186
T I + TVTT + T+ P TT V + T T+P ++ P +
Sbjct: 128 KVTTTPI-------VTTVPTVTTVRTSTT---VPTTTTVPMTTVPTTTVPTTMSI--PTT 175
Query: 187 KTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLSTRSPTT 242
T + STT+ P T T + + + P + ++ + SP++
Sbjct: 176 TTVLTTMTVSTTTSVPTTTSIPTTTSVPVTTTVSTFVPPMPLPRQNHEPVATSPSS 231
>gi|153945878 mucin 5, subtype B, tracheobronchial [Homo sapiens]
Length = 5765
Score = 38.5 bits (88), Expect = 0.008
Identities = 31/102 (30%), Positives = 43/102 (42%), Gaps = 7/102 (6%)
Query: 126 APQTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPA 185
+P T R + IL + +T TS A T+ TP L +S P+
Sbjct: 3466 SPHTVRTAWTSATSGILGTTHITEPSTVTSHTPAATTSTTQHSTPAL-------SSPHPS 3518
Query: 186 SKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPES 227
S+T S + TT+ G R T TA+PS R S+ P S
Sbjct: 3519 SRTTESPPSPGTTTPGHTRGTSRTTATATPSKTRTSTLLPSS 3560
Score = 37.4 bits (85), Expect = 0.018
Identities = 38/100 (38%), Positives = 48/100 (48%), Gaps = 11/100 (11%)
Query: 146 TVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPASKTGYSFTATSTTSQGPRRT 205
T T TS PF++ PG T L ST + T SFTA ++S G T
Sbjct: 2501 TTATTPTVTSSKATPFSS------PGTATALPALRSTA-TTPTATSFTAIPSSSLGTTWT 2553
Query: 206 MGSQTV--TASPSNARDSSAGPESISTKSGDLSTRSPTTG 243
SQT TA+ S A SS PE++ T S L+T + TTG
Sbjct: 2554 RLSQTTTPTATMSTATPSST-PETVHT-STVLTTTATTTG 2591
Score = 36.2 bits (82), Expect = 0.040
Identities = 30/102 (29%), Positives = 41/102 (40%), Gaps = 7/102 (6%)
Query: 126 APQTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPA 185
+P T R + L + +T TS A T TP L +S P+
Sbjct: 2766 SPHTVRTAWTSATSGTLGTTHITEPSTGTSHTPAATTGTTQHSTPAL-------SSPHPS 2818
Query: 186 SKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPES 227
S+T S + TT+ G R T TA+PS R S+ P S
Sbjct: 2819 SRTTESPPSPGTTTPGHTRATSRTTATATPSKTRTSTLLPSS 2860
Score = 35.8 bits (81), Expect = 0.052
Identities = 33/132 (25%), Positives = 51/132 (38%), Gaps = 12/132 (9%)
Query: 123 VSPAPQTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTP------GLITLP 176
V+P P + +T L + P+S P+ T+ V+ T G + P
Sbjct: 1983 VTPIPSSSLGTTWTRLSQTTTPTATMSTATPSSTPETAHTSTVLTATATTTGATGSVATP 2042
Query: 177 RLLASTRPASK----TGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESI--ST 230
T +K T FTAT ++S G T T + R S+ P SI +T
Sbjct: 2043 SSTPGTAHTTKVPTTTTTGFTATPSSSPGTALTPPVWISTTTTPTTRGSTVTPSSIPGTT 2102
Query: 231 KSGDLSTRSPTT 242
+ + T + TT
Sbjct: 2103 HTATVLTTTTTT 2114
Score = 35.0 bits (79), Expect = 0.089
Identities = 39/120 (32%), Positives = 53/120 (44%), Gaps = 17/120 (14%)
Query: 126 APQTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPA 185
A T+ H+ + TVT+ +A S +PG T L ST
Sbjct: 4472 ASSTQATAGTPHVSTTATTPTVTSSKATPSS------------SPGTATALPALRSTA-T 4518
Query: 186 SKTGYSFTATSTTSQGPRRTMGSQTV--TASPSNARDSSAGPESISTKSGDLSTRSPTTG 243
+ T SFTA ++S G T SQT TA+ S A SS PE++ T S L+ + TTG
Sbjct: 4519 TPTATSFTAIPSSSLGTTWTRLSQTTTPTATMSTATPSST-PETVHT-STVLTATATTTG 4576
Score = 34.7 bits (78), Expect = 0.12
Identities = 30/102 (29%), Positives = 41/102 (40%), Gaps = 7/102 (6%)
Query: 126 APQTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPA 185
+P T R + IL + +T TS A T TP L +S P+
Sbjct: 2209 SPHTVRTAWTSATSGILGTTHITEPSTVTSHTLAATTGTTQHSTPAL-------SSPHPS 2261
Query: 186 SKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPES 227
S+T S + TT+ G T TA+PS R S+ P S
Sbjct: 2262 SRTTESPPSPGTTTPGHTTATSRTTATATPSKTRTSTLLPSS 2303
Score = 34.7 bits (78), Expect = 0.12
Identities = 32/128 (25%), Positives = 50/128 (39%), Gaps = 12/128 (9%)
Query: 127 PQTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTP------GLITLPRLLA 180
P + +T L + P+S P+ T+ V+ T G + P
Sbjct: 2544 PSSSLGTTWTRLSQTTTPTATMSTATPSSTPETVHTSTVLTTTATTTGATGSVATPSSTP 2603
Query: 181 STRPASK----TGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESI--STKSGD 234
T +K T FTAT ++S G RT+ T + R S+ P SI +T +
Sbjct: 2604 GTAHTTKVLTTTTTGFTATPSSSPGTARTLPVWISTTTTPTTRGSTVTPSSIPGTTHTPT 2663
Query: 235 LSTRSPTT 242
+ T + TT
Sbjct: 2664 VLTTTTTT 2671
Score = 33.9 bits (76), Expect = 0.20
Identities = 33/117 (28%), Positives = 50/117 (42%), Gaps = 20/117 (17%)
Query: 146 TVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPASKTGYSFTATSTTSQG---- 201
T T TS PF++ PG T L ST + T SFTA ++S G
Sbjct: 3758 TTATTPTVTSSKATPFSS------PGTATALPALRSTA-TTPTATSFTAIPSSSLGTTWT 3810
Query: 202 -------PRRTMGSQTVTASPSNARDSSAGPESIST--KSGDLSTRSPTTGLCLTSR 249
P TM + T +++P A S+ + +T +G ++T S T G T++
Sbjct: 3811 RLSQTTTPTATMSTATPSSTPETAHTSTVLTTTATTTRATGSVATPSSTPGTAHTTK 3867
Score = 33.9 bits (76), Expect = 0.20
Identities = 29/102 (28%), Positives = 40/102 (39%), Gaps = 7/102 (6%)
Query: 126 APQTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPA 185
+P T R + L + +T TS A T TP L +S P+
Sbjct: 4023 SPHTVRTAWTSATSGTLGTTHITEPSTGTSHTPAATTGTTQHSTPAL-------SSPHPS 4075
Query: 186 SKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPES 227
S+T S + TT+ G T TA+PS R S+ P S
Sbjct: 4076 SRTTESPPSPGTTTPGHTTATSRTTATATPSKTRTSTLLPSS 4117
Score = 32.3 bits (72), Expect = 0.58
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 170 PGLITLPRLLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESIS 229
PG P L AST PA T TAT T+ ++ S TA+ ++ SS+GP +++
Sbjct: 1441 PGTSPQPSLSASTEPAVPTPTQTTATEKTTLWVTPSIRS---TAALTSQTGSSSGPVTVT 1497
Query: 230 TKSGDLSTRSP 240
+ +T P
Sbjct: 1498 PSAPGTTTCQP 1508
Score = 32.3 bits (72), Expect = 0.58
Identities = 32/132 (24%), Positives = 50/132 (37%), Gaps = 12/132 (9%)
Query: 123 VSPAPQTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTP------GLITLP 176
V+ P + +T L + P+S P+ T+ V+ T G + P
Sbjct: 3240 VTAIPSSSLGTAWTRLSQTTTPTATMSTATPSSTPETVHTSTVLTTTTTTTRATGSVATP 3299
Query: 177 RLLASTRPASK----TGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESI--ST 230
T +K T FTAT ++S G T T + R S+ P SI +T
Sbjct: 3300 SSTPGTAHTTKVPTTTTTGFTATPSSSPGTALTPPVWISTTTTPTTRGSTVTPSSIPGTT 3359
Query: 231 KSGDLSTRSPTT 242
+ + T + TT
Sbjct: 3360 HTATVLTTTTTT 3371
Score = 32.0 bits (71), Expect = 0.76
Identities = 27/113 (23%), Positives = 47/113 (41%), Gaps = 3/113 (2%)
Query: 138 LDNILKSGTVTTGQAPTSGPDA-PFTTGVMV--FTPGLITLPRLLASTRPASKTGYSFTA 194
L + + T T T+ P + P TT ++ T +T+P +T +++
Sbjct: 4424 LTELTTTATTTASTGSTATPSSTPGTTWILTEPSTTATVTVPTGSTATASSTQATAGTPH 4483
Query: 195 TSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLSTRSPTTGLCLT 247
STT+ P T T ++SP A A + +T + T P++ L T
Sbjct: 4484 VSTTATTPTVTSSKATPSSSPGTATALPALRSTATTPTATSFTAIPSSSLGTT 4536
Score = 31.6 bits (70), Expect = 0.99
Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 10/104 (9%)
Query: 138 LDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPASKTGYSFTATST 197
L + + T T T+ P + TPG P++L S + T S ATS+
Sbjct: 4253 LTELTTTATTTASTGSTATPSS---------TPGTAPPPKVLTSPA-TTPTATSSKATSS 4302
Query: 198 TSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLSTRSPT 241
+S T+ T TA+ S A + P S +G L ++ T
Sbjct: 4303 SSPRTATTLPVLTSTATKSTATSVTPIPSSTLGTTGTLPEQTTT 4346
Score = 30.4 bits (67), Expect = 2.2
Identities = 35/115 (30%), Positives = 42/115 (36%), Gaps = 10/115 (8%)
Query: 150 GQAPTSGPDAPFTTGVMVFTPGLITLPRLLAS---TR--PASKTGYSFTATSTTSQGPRR 204
G+A T P T T L + P+ +S TR PAS T + TS PR
Sbjct: 1608 GRATTPPPTTELETATTTTTQALFSTPQPTSSPGLTRAPPASTTAVPTLSEGLTS--PRY 1665
Query: 205 TMGSQTVTASPSNARDSSAGPESISTKSGDLSTRSPTTGLCLTSRSLLNRLPSMP 259
T T T S P + L TRS G T+ SL PS P
Sbjct: 1666 TSTLGTATTGGPTTPAGSTEPTVPGVATSTLPTRSALPG---TTGSLGTWRPSQP 1717
Score = 30.4 bits (67), Expect = 2.2
Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 3/113 (2%)
Query: 138 LDNILKSGTVTTGQAPTSGPDA-PFTTGVMV--FTPGLITLPRLLASTRPASKTGYSFTA 194
L + + T T T+ P + P TT ++ T +T+P +T +++
Sbjct: 2439 LTELTTTATTTESTGSTATPSSTPGTTWILTEPSTTATVTVPTGSTATASSTQATAGTPH 2498
Query: 195 TSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLSTRSPTTGLCLT 247
STT+ P T T +SP A A + +T + T P++ L T
Sbjct: 2499 VSTTATTPTVTSSKATPFSSPGTATALPALRSTATTPTATSFTAIPSSSLGTT 2551
Score = 30.4 bits (67), Expect = 2.2
Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 3/113 (2%)
Query: 138 LDNILKSGTVTTGQAPTSGPDA-PFTTGVMV--FTPGLITLPRLLASTRPASKTGYSFTA 194
L + + T T T+ P + P TT ++ T +T+P +T +++
Sbjct: 3696 LTKLTTTATTTESTGSTATPSSTPGTTWILTEPSTTATVTVPTGSTATASSTQATAGTPH 3755
Query: 195 TSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLSTRSPTTGLCLT 247
STT+ P T T +SP A A + +T + T P++ L T
Sbjct: 3756 VSTTATTPTVTSSKATPFSSPGTATALPALRSTATTPTATSFTAIPSSSLGTT 3808
Score = 30.0 bits (66), Expect = 2.9
Identities = 33/122 (27%), Positives = 50/122 (40%), Gaps = 17/122 (13%)
Query: 136 THLDNILKS-GTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPASKTGYSFTA 194
TH +L + T T + TS P + T G L T A+T P TA
Sbjct: 4363 THTSTVLTTKATTTRATSSTSTPSS--TPGTTWILTELTTAATTTAATGP--------TA 4412
Query: 195 TSTTSQGPRRTMGSQTVTASPSNARDSSAGPES------ISTKSGDLSTRSPTTGLCLTS 248
T +++ G + T TA+ + + S+A P S I T+ +T + TG T+
Sbjct: 4413 TPSSTPGTTWILTELTTTATTTASTGSTATPSSTPGTTWILTEPSTTATVTVPTGSTATA 4472
Query: 249 RS 250
S
Sbjct: 4473 SS 4474
Score = 29.3 bits (64), Expect = 4.9
Identities = 27/118 (22%), Positives = 53/118 (44%), Gaps = 11/118 (9%)
Query: 146 TVTTGQAPTSGPDAPFT--TGVMVFTPGLITLPRLLASTRPASKTGYSFTATSTTSQGPR 203
T+ T + P +P T T T G++ + T P++ T ++ AT+ T+Q
Sbjct: 2196 TMATTHGRSLPPSSPHTVRTAWTSATSGILGTTHI---TEPSTVTSHTLAATTGTTQ--- 2249
Query: 204 RTMGSQTVTASPSNARDSSAGPESISTKSGDLSTRSPTTGLCLTSRSLLNR-LPSMPS 260
+ +++ ++R + + P +T G + S TT S++ + LPS P+
Sbjct: 2250 --HSTPALSSPHPSSRTTESPPSPGTTTPGHTTATSRTTATATPSKTRTSTLLPSSPT 2305
Score = 29.3 bits (64), Expect = 4.9
Identities = 29/128 (22%), Positives = 47/128 (36%), Gaps = 12/128 (9%)
Query: 127 PQTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTP------GLITLPRLLA 180
P + +T L + P+S P+ T+ V+ T G + P
Sbjct: 3801 PSSSLGTTWTRLSQTTTPTATMSTATPSSTPETAHTSTVLTTTATTTRATGSVATPSSTP 3860
Query: 181 STRPASK----TGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESI--STKSGD 234
T +K T FT T ++S G RT T + S+ P S+ +T +
Sbjct: 3861 GTAHTTKVPTTTTTGFTVTPSSSPGTARTPPVWISTTTTPTTSGSTVTPSSVPGTTHTPT 3920
Query: 235 LSTRSPTT 242
+ T + TT
Sbjct: 3921 VLTTTTTT 3928
>gi|8924262 triggering receptor expressed on myeloid cells 1 [Homo
sapiens]
Length = 234
Score = 38.1 bits (87), Expect = 0.011
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 8/87 (9%)
Query: 28 KVRLLEGETLSVQCSYKGYKNRVEGKVWCKIRKKKC--------EPGFARVWVKGPRYLL 79
K L EG+TL V+C Y K K W IR + P V+ R +L
Sbjct: 28 KYELKEGQTLDVKCDYTLEKFASSQKAWQIIRDGEMPKTLACTERPSKNSHPVQVGRIIL 87
Query: 80 QDDAQAKVVNITMVALKLQDSGRYWCM 106
+D ++ + MV L+++DSG Y C+
Sbjct: 88 EDYHDHGLLRVRMVNLQVEDSGLYQCV 114
>gi|239757995 PREDICTED: similar to hCG1747327, partial [Homo
sapiens]
Length = 1064
Score = 38.1 bits (87), Expect = 0.011
Identities = 42/162 (25%), Positives = 60/162 (37%), Gaps = 31/162 (19%)
Query: 109 TSGILYPLMGFQLDVSPAPQTERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVF 168
T+ L L L +PAP TE V T T+ P + T
Sbjct: 519 TTNTLSSLTSSILSSTPAPNTE----------------VITSHTTTTTPPSTLVT----- 557
Query: 169 TPGLITLPRLLASTRPASKTGYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESI 228
TLP +A + P S+T Y + T T + S ++T + S A S+
Sbjct: 558 -----TLPTAIARSTPTSETTYPISPTGTVTDSMTEITYSTSMTGTWSTATTLPLTSCSL 612
Query: 229 STKSGDLSTRSPTTGLCLTSRSLLNRLPSMPSIRHQDVYSTV 270
T + +PTT L T+ + S PS +YSTV
Sbjct: 613 PTIE---TATTPTTNLGNTTTETTSH--STPSFTSSAIYSTV 649
Score = 37.0 bits (84), Expect = 0.023
Identities = 29/132 (21%), Positives = 56/132 (42%), Gaps = 2/132 (1%)
Query: 142 LKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPASKTGYSFTATSTTSQG 201
L S +++ P++ TT + + TLP + ++ P S+T YS + TST +
Sbjct: 902 LTSSILSSTPVPSTEVITSQTTNTTSPSTLVTTLPTTITTSTPTSETTYSTSPTSTVTDS 961
Query: 202 PRRTMGSQTVTASPSNARDSSAGPESISTKSGDLSTRSPTTGLCLTSRSLLNRLPSMPSI 261
T S ++T + S A S+ TK +S S + T+ + + P+
Sbjct: 962 TTETTYSTSITGTLSTEISLPATTSSLITKG--ISMTSTRNLVTTTNENTSHSTPTFTLT 1019
Query: 262 RHQDVYSTVLGV 273
H + ++ +
Sbjct: 1020 IHSTISTSTTAI 1031
Score = 36.6 bits (83), Expect = 0.031
Identities = 36/142 (25%), Positives = 61/142 (42%), Gaps = 10/142 (7%)
Query: 129 TERNIPFTHLDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPASKT 188
T N + + NIL S V + + TS TT + + TLP + + P S+T
Sbjct: 277 TATNTLSSLMSNILSSTPVPSTEMTTS-----HTTDTNPLSTLVTTLPTTITRSTPTSET 331
Query: 189 GYSFTATSTTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLSTRSPTTGLCLTS 248
Y + TST + S +T + S ++ P + S++ + +PTT L T+
Sbjct: 332 TYPASPTSTVTDSTTEITYSTVLTGTLS---PTTTLPPTSSSQQTTETPMTPTTKLVTTT 388
Query: 249 RSLLNRLPSMPSIRHQDVYSTV 270
++ S + +YSTV
Sbjct: 389 TETTSQ--SSLNFSSSAIYSTV 408
Score = 36.6 bits (83), Expect = 0.031
Identities = 41/160 (25%), Positives = 68/160 (42%), Gaps = 11/160 (6%)
Query: 113 LYPLMGFQLDVSPAPQTERNIPFTHLDNILKS-----GTVTTGQAPTSGPDAPFT-TGVM 166
L LM L +P P TE T N L + T T PTS P + T +
Sbjct: 282 LSSLMSNILSSTPVPSTEMTTSHTTDTNPLSTLVTTLPTTITRSTPTSETTYPASPTSTV 341
Query: 167 VFTPGLITLPRLLASTRPASKTGYSFTATSTTSQGPR----RTMGSQTVTASPSNAR-DS 221
+ IT +L T + T +++ T++ P + + + T T S S+ S
Sbjct: 342 TDSTTEITYSTVLTGTLSPTTTLPPTSSSQQTTETPMTPTTKLVTTTTETTSQSSLNFSS 401
Query: 222 SAGPESISTKSGDLSTRSPTTGLCLTSRSLLNRLPSMPSI 261
SA ++ST + +S+ PT+G +TS +++ P +
Sbjct: 402 SAIYSTVSTSTTAISSLPPTSGTMVTSTNIVPTADLKPEL 441
Score = 32.3 bits (72), Expect = 0.58
Identities = 34/113 (30%), Positives = 48/113 (42%), Gaps = 18/113 (15%)
Query: 144 SGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPA-SKTGYSFTATSTTSQGP 202
S T + P+SG FTT I+ L T+P+ TG+ AT TS
Sbjct: 652 STTTISSFPPSSGTMVTFTTMNPSSLSTDISTTTLKNITQPSVGSTGFLTAATDLTS--- 708
Query: 203 RRTMGSQTVTASPSNARDSSAGPESISTKSGDLST-------RSPTTGLCLTS 248
T T S S+A +S P + S ++ ++ST SPT + LTS
Sbjct: 709 -------TFTVSSSSAMSTSVTPSAPSIQNKEISTLVSTTTTTSPTERMTLTS 754
>gi|239740777 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1612
Score = 37.4 bits (85), Expect = 0.018
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 138 LDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLI--TLPRLLASTRPASKTGYSFTAT 195
+ N SGT TTG PT+ G M FT T+P ++ +T T ++
Sbjct: 1298 ITNTPMSGTRTTGTRPTASSSVTMAPG-MDFTASAASHTVPGIVLNTSGLG-TSTMGASS 1355
Query: 196 STTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLSTRSPT 241
+T++ G R T GS T P+++ GP S+ T + +S +PT
Sbjct: 1356 TTSAHGVRTTTGS---TREPTSSTFQETGPVSMGTNTVSMS-HTPT 1397
Score = 34.7 bits (78), Expect = 0.12
Identities = 37/134 (27%), Positives = 53/134 (39%), Gaps = 22/134 (16%)
Query: 149 TGQAPTSGPDAP--FTTGVMVFTPGLITLPRLLASTRPASKTGYSFTATSTTSQGPRR-- 204
T A T+G + FT G TP ST + T S T + TT+
Sbjct: 164 TTAASTTGSEMTTVFTAGSETITPSTAGSETTTVSTAGSETTTVSTTGSETTTASTAHSE 223
Query: 205 -----TMGSQT--VTASPSNARDSSAGPESISTKSGD-----------LSTRSPTTGLCL 246
TMGS+T V+ + S S+AG E+ + + D +T + TTG
Sbjct: 224 TTAASTMGSETTKVSTAGSETTVSTAGSETTAASTEDSETNTAFTEDSKTTTASTTGFET 283
Query: 247 TSRSLLNRLPSMPS 260
T+ S P+M S
Sbjct: 284 TAASTTGSEPTMAS 297
Score = 33.9 bits (76), Expect = 0.20
Identities = 36/123 (29%), Positives = 49/123 (39%), Gaps = 10/123 (8%)
Query: 146 TVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPASKTGYSFTATSTTSQGPRRT 205
T T G T+ T V G T+ + T S TG T TST +G T
Sbjct: 666 TSTEGSETTTVSATGSETTVSTEGSGTTTVSITGSETTKVSTTGSETTTTST--EGSEIT 723
Query: 206 M----GSQTVTASPSNARDSSAGPESISTKS----GDLSTRSPTTGLCLTSRSLLNRLPS 257
GS+T TAS + ++A E T S G +T + TT T S++ +
Sbjct: 724 TASITGSETTTASTEGSETTTASTEGSETTSASTTGSETTTASTTSSETTMASIMGSETT 783
Query: 258 MPS 260
M S
Sbjct: 784 MAS 786
Score = 32.7 bits (73), Expect = 0.44
Identities = 35/139 (25%), Positives = 59/139 (42%), Gaps = 15/139 (10%)
Query: 146 TVTTGQAPTSGPDAPFTTGVMVFTPGL-----ITLPRLLASTRPASKTGYSFTATSTTSQ 200
TVTT + T+ A +TTG T T+ + T AS T ST+
Sbjct: 1035 TVTTAGSETT---AVYTTGSETTTTSTEGSETTTVSTTGSETTTASTADLETTTVSTSGS 1091
Query: 201 GPRR--TMGSQTVTASPSNARDSSAGPE-----SISTKSGDLSTRSPTTGLCLTSRSLLN 253
G T GS+T T + ++ ++A E ++ST S + +T S T T + ++
Sbjct: 1092 GTTTASTAGSETTTVYITGSKTTTASTEGSEATTVSTTSSETTTASTTGSEMTTVFTTVS 1151
Query: 254 RLPSMPSIRHQDVYSTVLG 272
++ +I + S+ G
Sbjct: 1152 ETTTVSTIGSEATTSSAAG 1170
Score = 32.3 bits (72), Expect = 0.58
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 9/112 (8%)
Query: 143 KSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPASKTGYSFTATSTTSQGP 202
K TV T + T+ + V T G T+P A + + T + T+T S
Sbjct: 801 KMTTVFTENSETTIASTTASETTTVSTAGSETIPASTAGSETTTTTSTEGSETTTAS--- 857
Query: 203 RRTMGSQTVTASPSNARDSSA---GPESISTKS-GDLSTRSPTTGLCLTSRS 250
T GS+T TAS ++ ++A G E+ + + G +T + T G T+ S
Sbjct: 858 --TEGSETTTASTESSETTTATTIGSETTTASTEGSETTTTSTEGSETTTAS 907
Score = 30.8 bits (68), Expect = 1.7
Identities = 27/94 (28%), Positives = 37/94 (39%), Gaps = 8/94 (8%)
Query: 162 TTGVMVFTPGLITLPRLLASTRPASKTGYSFTATSTTSQGPR-------RTMGSQTVTAS 214
TTG T L ST + T S T TT+ T GS+T T S
Sbjct: 538 TTGSETTTVSTTGLETTTTSTEGSEMTTVSTTGAETTTDSTEGSGTTAASTAGSETTTVS 597
Query: 215 PSNARDSSAGPESISTKSGDLSTRSPTTGLCLTS 248
+++ +++A T S +T S TT TS
Sbjct: 598 TADSENTTASTADSETTSAS-TTGSETTTASTTS 630
Score = 30.8 bits (68), Expect = 1.7
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 12/114 (10%)
Query: 148 TTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPASKTGYSFTATSTT---SQGPRR 204
TT S + TTG T + AST + T S T + TT + G R
Sbjct: 604 TTASTADSETTSASTTGSETTTASTTSSETTTASTEGSETTTVSTTDSETTMVSTTGSER 663
Query: 205 TM----GSQTVTASPSNARDS----SAGPESISTKSGDLSTRSPTTGLCLTSRS 250
T+ GS+T T S + + + +G ++S +G +T+ TTG T+ S
Sbjct: 664 TITSTEGSETTTVSATGSETTVSTEGSGTTTVSI-TGSETTKVSTTGSETTTTS 716
Score = 30.4 bits (67), Expect = 2.2
Identities = 30/107 (28%), Positives = 42/107 (39%), Gaps = 11/107 (10%)
Query: 148 TTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPASKTGYSFTATSTTSQG------ 201
TT SG A T G T AST + T S T + TT+
Sbjct: 574 TTDSTEGSGTTAASTAGSETTTVSTADSENTTASTADSETTSASTTGSETTTASTTSSET 633
Query: 202 -PRRTMGSQTVTASPSNARD---SSAGPE-SISTKSGDLSTRSPTTG 243
T GS+T T S +++ S+ G E +I++ G +T TG
Sbjct: 634 TTASTEGSETTTVSTTDSETTMVSTTGSERTITSTEGSETTTVSATG 680
Score = 29.3 bits (64), Expect = 4.9
Identities = 31/110 (28%), Positives = 44/110 (40%), Gaps = 20/110 (18%)
Query: 149 TGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPASKTGYSFTATSTTSQ-------- 200
T A T GP+ TT V + + T+ + T AS G T STT
Sbjct: 303 TTMASTIGPE---TTKVSTASSEVTTVFAAGSETIRASTVGSETTTVSTTGSETTTASIM 359
Query: 201 ----GPRRTMGSQTVTASPSNARDSSAGPE-----SISTKSGDLSTRSPT 241
T GS+T TAS + ++A E ++ST + +T S T
Sbjct: 360 GSETSTDSTTGSETTTASTEGSETTTASTEGSEATTVSTTGSETTTVSIT 409
Score = 29.3 bits (64), Expect = 4.9
Identities = 38/139 (27%), Positives = 58/139 (41%), Gaps = 22/139 (15%)
Query: 149 TGQAPTSGPDA--PFTTGVMVFTPGLITLPRLLASTRPASKTGYSFTATSTTSQGPRRTM 206
T A T+G + P + G T +I +AST T S T + TT
Sbjct: 1213 TNTACTTGSETSTPSSAGSETNTAFIIGSETTIASTASLEPTATSLTGSETT-------- 1264
Query: 207 GSQTVTASPSNARDSSAGPES-ISTKSGDLS----TRSP-----TTGLCLTSRSLLNRLP 256
+ ++TAS + A ++ + + TK+ D+S T +P TTG T+ S + P
Sbjct: 1265 -TVSITASGATAASTTVSSTTFVLTKATDVSIQPITNTPMSGTRTTGTRPTASSSVTMAP 1323
Query: 257 SMPSIRHQDVYSTVLGVVL 275
M TV G+VL
Sbjct: 1324 GM-DFTASAASHTVPGIVL 1341
Score = 28.9 bits (63), Expect = 6.4
Identities = 32/113 (28%), Positives = 48/113 (42%), Gaps = 8/113 (7%)
Query: 146 TVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLL--ASTRPASKTGYSFTATSTTSQGP- 202
TVTT + T+ + V T G T + + T S TG T STT
Sbjct: 965 TVTTMGSETTTASTAGSETTTVSTAGSETTTASIEGSETTTVSSTGSETTTVSTTGTETT 1024
Query: 203 -RRTMGSQTVTASPSNARDS---SAGPESISTKS-GDLSTRSPTTGLCLTSRS 250
T GS+T T + + + + + G E+ +T + G +T TTG T+ S
Sbjct: 1025 ITSTEGSETTTVTTAGSETTAVYTTGSETTTTSTEGSETTTVSTTGSETTTAS 1077
Score = 28.5 bits (62), Expect = 8.4
Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 11/107 (10%)
Query: 148 TTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPASKTGYSFTATSTTSQGPRRTMG 207
TTG T+ + T VFT G T AST + T S T + T+ T G
Sbjct: 478 TTGSETTTASNTGLET-TTVFTIGSDTTT---ASTEGSETTAVSATGSEMTTVS---TEG 530
Query: 208 SQTVTASPSNARD---SSAGPESISTKS-GDLSTRSPTTGLCLTSRS 250
S+ T S + + S+ G E+ +T + G T TTG T+ S
Sbjct: 531 SENTTVSTTGSETTTVSTTGLETTTTSTEGSEMTTVSTTGAETTTDS 577
Score = 28.5 bits (62), Expect = 8.4
Identities = 29/103 (28%), Positives = 40/103 (38%), Gaps = 6/103 (5%)
Query: 143 KSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPASKTGYSFTATSTTSQGP 202
+S TT S T G T AST + T S T + TT+
Sbjct: 869 ESSETTTATTIGSETTTASTEGSETTTTSTEGSETTTASTEGSEITTVSTTGSETTTAS- 927
Query: 203 RRTMGSQTVTASPSNAR---DSSAGPESISTKSGDLSTRSPTT 242
T GS+T TAS + S+ G E+I+ + T + TT
Sbjct: 928 --TEGSETTTASTEGSELTTVSTTGSETITVSAEGSETTTVTT 968
>gi|239740724 PREDICTED: hypothetical protein [Homo sapiens]
Length = 1704
Score = 37.4 bits (85), Expect = 0.018
Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 8/106 (7%)
Query: 138 LDNILKSGTVTTGQAPTSGPDAPFTTGVMVFTPGLI--TLPRLLASTRPASKTGYSFTAT 195
+ N SGT TTG PT+ G M FT T+P ++ +T T ++
Sbjct: 1298 ITNTPMSGTRTTGTRPTASSSVTMAPG-MDFTASAASHTVPGIVLNTSGLG-TSTMGASS 1355
Query: 196 STTSQGPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLSTRSPT 241
+T++ G R T GS T P+++ GP S+ T + +S +PT
Sbjct: 1356 TTSAHGVRTTTGS---TREPTSSTFQETGPVSMGTNTVSMS-HTPT 1397
Score = 34.7 bits (78), Expect = 0.12
Identities = 37/134 (27%), Positives = 53/134 (39%), Gaps = 22/134 (16%)
Query: 149 TGQAPTSGPDAP--FTTGVMVFTPGLITLPRLLASTRPASKTGYSFTATSTTSQGPRR-- 204
T A T+G + FT G TP ST + T S T + TT+
Sbjct: 164 TTAASTTGSEMTTVFTAGSETITPSTAGSETTTVSTAGSETTTVSTTGSETTTASTAHSE 223
Query: 205 -----TMGSQT--VTASPSNARDSSAGPESISTKSGD-----------LSTRSPTTGLCL 246
TMGS+T V+ + S S+AG E+ + + D +T + TTG
Sbjct: 224 TTAASTMGSETTKVSTAGSETTVSTAGSETTAASTEDSETNTAFTEDSKTTTASTTGFET 283
Query: 247 TSRSLLNRLPSMPS 260
T+ S P+M S
Sbjct: 284 TAASTTGSEPTMAS 297
Score = 33.9 bits (76), Expect = 0.20
Identities = 36/123 (29%), Positives = 49/123 (39%), Gaps = 10/123 (8%)
Query: 146 TVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPASKTGYSFTATSTTSQGPRRT 205
T T G T+ T V G T+ + T S TG T TST +G T
Sbjct: 666 TSTEGSETTTVSATGSETTVSTEGSGTTTVSITGSETTKVSTTGSETTTTST--EGSEIT 723
Query: 206 M----GSQTVTASPSNARDSSAGPESISTKS----GDLSTRSPTTGLCLTSRSLLNRLPS 257
GS+T TAS + ++A E T S G +T + TT T S++ +
Sbjct: 724 TASITGSETTTASTEGSETTTASTEGSETTSASTTGSETTTASTTSSETTMASIMGSETT 783
Query: 258 MPS 260
M S
Sbjct: 784 MAS 786
Score = 32.7 bits (73), Expect = 0.44
Identities = 35/139 (25%), Positives = 59/139 (42%), Gaps = 15/139 (10%)
Query: 146 TVTTGQAPTSGPDAPFTTGVMVFTPGL-----ITLPRLLASTRPASKTGYSFTATSTTSQ 200
TVTT + T+ A +TTG T T+ + T AS T ST+
Sbjct: 1035 TVTTAGSETT---AVYTTGSETTTTSTEGSETTTVSTTGSETTTASTADLETTTVSTSGS 1091
Query: 201 GPRR--TMGSQTVTASPSNARDSSAGPE-----SISTKSGDLSTRSPTTGLCLTSRSLLN 253
G T GS+T T + ++ ++A E ++ST S + +T S T T + ++
Sbjct: 1092 GTTTASTAGSETTTVYITGSKTTTASTEGSEATTVSTTSSETTTASTTGSEMTTVFTTVS 1151
Query: 254 RLPSMPSIRHQDVYSTVLG 272
++ +I + S+ G
Sbjct: 1152 ETTTVSTIGSEATTSSAAG 1170
Score = 32.3 bits (72), Expect = 0.58
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 9/112 (8%)
Query: 143 KSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPASKTGYSFTATSTTSQGP 202
K TV T + T+ + V T G T+P A + + T + T+T S
Sbjct: 801 KMTTVFTENSETTIASTTASETTTVSTAGSETIPASTAGSETTTTTSTEGSETTTAS--- 857
Query: 203 RRTMGSQTVTASPSNARDSSA---GPESISTKS-GDLSTRSPTTGLCLTSRS 250
T GS+T TAS ++ ++A G E+ + + G +T + T G T+ S
Sbjct: 858 --TEGSETTTASTESSETTTATTIGSETTTASTEGSETTTTSTEGSETTTAS 907
Score = 30.8 bits (68), Expect = 1.7
Identities = 27/94 (28%), Positives = 37/94 (39%), Gaps = 8/94 (8%)
Query: 162 TTGVMVFTPGLITLPRLLASTRPASKTGYSFTATSTTSQGPR-------RTMGSQTVTAS 214
TTG T L ST + T S T TT+ T GS+T T S
Sbjct: 538 TTGSETTTVSTTGLETTTTSTEGSEMTTVSTTGAETTTDSTEGSGTTAASTAGSETTTVS 597
Query: 215 PSNARDSSAGPESISTKSGDLSTRSPTTGLCLTS 248
+++ +++A T S +T S TT TS
Sbjct: 598 TADSENTTASTADSETTSAS-TTGSETTTASTTS 630
Score = 30.8 bits (68), Expect = 1.7
Identities = 32/114 (28%), Positives = 49/114 (42%), Gaps = 12/114 (10%)
Query: 148 TTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPASKTGYSFTATSTT---SQGPRR 204
TT S + TTG T + AST + T S T + TT + G R
Sbjct: 604 TTASTADSETTSASTTGSETTTASTTSSETTTASTEGSETTTVSTTDSETTMVSTTGSER 663
Query: 205 TM----GSQTVTASPSNARDS----SAGPESISTKSGDLSTRSPTTGLCLTSRS 250
T+ GS+T T S + + + +G ++S +G +T+ TTG T+ S
Sbjct: 664 TITSTEGSETTTVSATGSETTVSTEGSGTTTVSI-TGSETTKVSTTGSETTTTS 716
Score = 30.4 bits (67), Expect = 2.2
Identities = 30/107 (28%), Positives = 42/107 (39%), Gaps = 11/107 (10%)
Query: 148 TTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPASKTGYSFTATSTTSQG------ 201
TT SG A T G T AST + T S T + TT+
Sbjct: 574 TTDSTEGSGTTAASTAGSETTTVSTADSENTTASTADSETTSASTTGSETTTASTTSSET 633
Query: 202 -PRRTMGSQTVTASPSNARD---SSAGPE-SISTKSGDLSTRSPTTG 243
T GS+T T S +++ S+ G E +I++ G +T TG
Sbjct: 634 TTASTEGSETTTVSTTDSETTMVSTTGSERTITSTEGSETTTVSATG 680
Score = 29.3 bits (64), Expect = 4.9
Identities = 31/110 (28%), Positives = 44/110 (40%), Gaps = 20/110 (18%)
Query: 149 TGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPASKTGYSFTATSTTSQ-------- 200
T A T GP+ TT V + + T+ + T AS G T STT
Sbjct: 303 TTMASTIGPE---TTKVSTASSEVTTVFAAGSETIRASTVGSETTTVSTTGSETTTASIM 359
Query: 201 ----GPRRTMGSQTVTASPSNARDSSAGPE-----SISTKSGDLSTRSPT 241
T GS+T TAS + ++A E ++ST + +T S T
Sbjct: 360 GSETSTDSTTGSETTTASTEGSETTTASTEGSEATTVSTTGSETTTVSIT 409
Score = 29.3 bits (64), Expect = 4.9
Identities = 38/139 (27%), Positives = 58/139 (41%), Gaps = 22/139 (15%)
Query: 149 TGQAPTSGPDA--PFTTGVMVFTPGLITLPRLLASTRPASKTGYSFTATSTTSQGPRRTM 206
T A T+G + P + G T +I +AST T S T + TT
Sbjct: 1213 TNTACTTGSETSTPSSAGSETNTAFIIGSETTIASTASLEPTATSLTGSETT-------- 1264
Query: 207 GSQTVTASPSNARDSSAGPES-ISTKSGDLS----TRSP-----TTGLCLTSRSLLNRLP 256
+ ++TAS + A ++ + + TK+ D+S T +P TTG T+ S + P
Sbjct: 1265 -TVSITASGATAASTTVSSTTFVLTKATDVSIQPITNTPMSGTRTTGTRPTASSSVTMAP 1323
Query: 257 SMPSIRHQDVYSTVLGVVL 275
M TV G+VL
Sbjct: 1324 GM-DFTASAASHTVPGIVL 1341
Score = 28.9 bits (63), Expect = 6.4
Identities = 32/113 (28%), Positives = 48/113 (42%), Gaps = 8/113 (7%)
Query: 146 TVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLL--ASTRPASKTGYSFTATSTTSQGP- 202
TVTT + T+ + V T G T + + T S TG T STT
Sbjct: 965 TVTTMGSETTTASTAGSETTTVSTAGSETTTASIEGSETTTVSSTGSETTTVSTTGTETT 1024
Query: 203 -RRTMGSQTVTASPSNARDS---SAGPESISTKS-GDLSTRSPTTGLCLTSRS 250
T GS+T T + + + + + G E+ +T + G +T TTG T+ S
Sbjct: 1025 ITSTEGSETTTVTTAGSETTAVYTTGSETTTTSTEGSETTTVSTTGSETTTAS 1077
Score = 28.5 bits (62), Expect = 8.4
Identities = 33/107 (30%), Positives = 46/107 (42%), Gaps = 11/107 (10%)
Query: 148 TTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPASKTGYSFTATSTTSQGPRRTMG 207
TTG T+ + T VFT G T AST + T S T + T+ T G
Sbjct: 478 TTGSETTTASNTGLET-TTVFTIGSDTTT---ASTEGSETTAVSATGSEMTTVS---TEG 530
Query: 208 SQTVTASPSNARD---SSAGPESISTKS-GDLSTRSPTTGLCLTSRS 250
S+ T S + + S+ G E+ +T + G T TTG T+ S
Sbjct: 531 SENTTVSTTGSETTTVSTTGLETTTTSTEGSEMTTVSTTGAETTTDS 577
Score = 28.5 bits (62), Expect = 8.4
Identities = 29/103 (28%), Positives = 40/103 (38%), Gaps = 6/103 (5%)
Query: 143 KSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPASKTGYSFTATSTTSQGP 202
+S TT S T G T AST + T S T + TT+
Sbjct: 869 ESSETTTATTIGSETTTASTEGSETTTTSTEGSETTTASTEGSEITTVSTTGSETTTAS- 927
Query: 203 RRTMGSQTVTASPSNAR---DSSAGPESISTKSGDLSTRSPTT 242
T GS+T TAS + S+ G E+I+ + T + TT
Sbjct: 928 --TEGSETTTASTEGSELTTVSTTGSETITVSAEGSETTTVTT 968
>gi|187960059 syndecan 3 [Homo sapiens]
Length = 442
Score = 37.0 bits (84), Expect = 0.023
Identities = 35/126 (27%), Positives = 57/126 (45%), Gaps = 12/126 (9%)
Query: 143 KSGTVTTGQAPTSGPDAPFTTGVMVFTPGLITLPRLLASTRPASKTGYSFTATSTT--SQ 200
++ TV+T A T A +TG P + T+P +A+ P++ FTAT+ +
Sbjct: 155 RATTVSTTMATT----AATSTG----DPTVATVPATVATATPSTPAAPPFTATTAVIRTT 206
Query: 201 GPRRTMGSQTVTASPSNARDSSAGPESISTKSGDLSTRSPTTGLCLTSRSLLNRLPSMPS 260
G RR + T + AR ++ S T + L T +PT L T+ S LP +
Sbjct: 207 GVRRLLPLPLTTV--ATARATTPEAPSPPTTAAVLDTEAPTPRLVSTATSRPRALPRPAT 264
Query: 261 IRHQDV 266
+ D+
Sbjct: 265 TQEPDI 270
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.133 0.404
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,430,275
Number of Sequences: 37866
Number of extensions: 606487
Number of successful extensions: 3419
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 41
Number of HSP's successfully gapped in prelim test: 105
Number of HSP's that attempted gapping in prelim test: 2512
Number of HSP's gapped (non-prelim): 771
length of query: 321
length of database: 18,247,518
effective HSP length: 102
effective length of query: 219
effective length of database: 14,385,186
effective search space: 3150355734
effective search space used: 3150355734
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.