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Search of human proteins with 170932471
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|170932471 hypothetical protein LOC79703 [Homo sapiens]
(677 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|170932471 hypothetical protein LOC79703 [Homo sapiens] 1358 0.0
gi|222446642 solute carrier family 36, member 3 isoform 1 [Homo ... 62 2e-09
gi|58533176 zinc finger, matrin type 1 isoform 1 [Homo sapiens] 58 3e-08
gi|148839316 NIMA-related kinase 4 [Homo sapiens] 57 6e-08
gi|219881538 hypothetical protein LOC199870 isoform 2 [Homo sapi... 57 7e-08
gi|219881536 hypothetical protein LOC199870 isoform 1 [Homo sapi... 57 7e-08
gi|6005810 mitogen-activated protein kinase kinase kinase kinase... 55 2e-07
gi|118442834 RPGRIP1-like isoform a [Homo sapiens] 54 4e-07
gi|111118986 alpha-1A-adrenergic receptor isoform 2 [Homo sapiens] 54 6e-07
gi|58331120 hypothetical protein LOC29058 isoform 1 [Homo sapiens] 52 1e-06
gi|94680985 cyclin J-like [Homo sapiens] 52 2e-06
gi|24497440 interleukin 12 receptor, beta 1 isoform 2 precursor ... 50 9e-06
gi|58294160 breast carcinoma amplified sequence 4 isoform a [Hom... 49 2e-05
gi|61969666 arginine-fifty homeobox [Homo sapiens] 48 3e-05
gi|28372523 intraflagellar transport protein IFT20 [Homo sapiens] 46 1e-04
gi|239744440 PREDICTED: hypothetical protein XP_002343124 [Homo ... 45 2e-04
gi|239735607 nucleoredoxin-like 2 isoform 2 [Homo sapiens] 45 3e-04
gi|231571356 nitric oxide synthase 3 isoform 4 [Homo sapiens] 45 3e-04
gi|237858664 hypothetical protein LOC123207 isoform b [Homo sapi... 45 3e-04
gi|217035093 cyclic nucleotide gated channel alpha 1 isoform 1 [... 44 5e-04
gi|51243063 MAD2L1 binding protein isoform 1 [Homo sapiens] 44 5e-04
gi|239755619 PREDICTED: hypothetical protein [Homo sapiens] 43 0.001
gi|239750132 PREDICTED: hypothetical protein XP_002347267 [Homo ... 43 0.001
gi|40807368 potassium channel regulator isoform 2 [Homo sapiens] 43 0.001
gi|66348062 fumarylacetoacetate hydrolase domain containing 1 is... 42 0.001
gi|34147532 myosin, light chain 10, regulatory [Homo sapiens] 42 0.002
gi|239757631 PREDICTED: hypothetical protein XP_002345506 [Homo ... 39 0.012
gi|239752121 PREDICTED: hypothetical protein XP_002348120 [Homo ... 39 0.012
gi|239746631 PREDICTED: hypothetical protein XP_002344231 [Homo ... 39 0.012
gi|78000165 sorbin and SH3 domain containing 1 isoform 4 [Homo s... 39 0.012
>gi|170932471 hypothetical protein LOC79703 [Homo sapiens]
Length = 677
Score = 1358 bits (3514), Expect = 0.0
Identities = 677/677 (100%), Positives = 677/677 (100%)
Query: 1 MGSRCRAWAWTRAWALAEFQARAEEGAAAAAAAAGGYPSTGRCRCSLRGMEGTAVAVFEI 60
MGSRCRAWAWTRAWALAEFQARAEEGAAAAAAAAGGYPSTGRCRCSLRGMEGTAVAVFEI
Sbjct: 1 MGSRCRAWAWTRAWALAEFQARAEEGAAAAAAAAGGYPSTGRCRCSLRGMEGTAVAVFEI 60
Query: 61 LRFLIIHWKCDIDVSKGALLEGQLVISIEGLNSKHQANALHCVTTRWSLTLLPRPECSGA 120
LRFLIIHWKCDIDVSKGALLEGQLVISIEGLNSKHQANALHCVTTRWSLTLLPRPECSGA
Sbjct: 61 LRFLIIHWKCDIDVSKGALLEGQLVISIEGLNSKHQANALHCVTTRWSLTLLPRPECSGA 120
Query: 121 VSAHCNLHLPGSSDSHASVPRVAGITDAHHHAWLIMVASAGSLFGGMVLKKFLKEIQSIL 180
VSAHCNLHLPGSSDSHASVPRVAGITDAHHHAWLIMVASAGSLFGGMVLKKFLKEIQSIL
Sbjct: 121 VSAHCNLHLPGSSDSHASVPRVAGITDAHHHAWLIMVASAGSLFGGMVLKKFLKEIQSIL 180
Query: 181 PGISAKLTWTSEEGSYSQDMTGVTPFQMIFEVDEKPRTLMTDCLVIKHFLRKIIMVHPKV 240
PGISAKLTWTSEEGSYSQDMTGVTPFQMIFEVDEKPRTLMTDCLVIKHFLRKIIMVHPKV
Sbjct: 181 PGISAKLTWTSEEGSYSQDMTGVTPFQMIFEVDEKPRTLMTDCLVIKHFLRKIIMVHPKV 240
Query: 241 RFHFSVKVNGILSTEIFGVENEPTLNLGNGIALLVDSQHYVRPNFGTIESHCSRIHPVLG 300
RFHFSVKVNGILSTEIFGVENEPTLNLGNGIALLVDSQHYVRPNFGTIESHCSRIHPVLG
Sbjct: 241 RFHFSVKVNGILSTEIFGVENEPTLNLGNGIALLVDSQHYVRPNFGTIESHCSRIHPVLG 300
Query: 301 HPVMLFIPEDVAGMDLLGELILTPAAALCPSPKVSSNQLNRISSVSIFLYGPLGLPLILS 360
HPVMLFIPEDVAGMDLLGELILTPAAALCPSPKVSSNQLNRISSVSIFLYGPLGLPLILS
Sbjct: 301 HPVMLFIPEDVAGMDLLGELILTPAAALCPSPKVSSNQLNRISSVSIFLYGPLGLPLILS 360
Query: 361 TWEQPMTTFFKDTSSLVDWKKYHLCMIPNLDLNLDRDLVLPDVSYQVESSEEDQSQTMDP 420
TWEQPMTTFFKDTSSLVDWKKYHLCMIPNLDLNLDRDLVLPDVSYQVESSEEDQSQTMDP
Sbjct: 361 TWEQPMTTFFKDTSSLVDWKKYHLCMIPNLDLNLDRDLVLPDVSYQVESSEEDQSQTMDP 420
Query: 421 QGQTLLLFLFVDFHSAFPVQQMEIWGVYTLLTTHLNAILVESHSVVQGSIQFTVDKVLEQ 480
QGQTLLLFLFVDFHSAFPVQQMEIWGVYTLLTTHLNAILVESHSVVQGSIQFTVDKVLEQ
Sbjct: 421 QGQTLLLFLFVDFHSAFPVQQMEIWGVYTLLTTHLNAILVESHSVVQGSIQFTVDKVLEQ 480
Query: 481 HHQAAKAQQKLQASLSVAVNSIMSILTGSTRSSFRKMCLQTLQAADTQEFRTKLHKVFRE 540
HHQAAKAQQKLQASLSVAVNSIMSILTGSTRSSFRKMCLQTLQAADTQEFRTKLHKVFRE
Sbjct: 481 HHQAAKAQQKLQASLSVAVNSIMSILTGSTRSSFRKMCLQTLQAADTQEFRTKLHKVFRE 540
Query: 541 ITQHQFLHHCSCEVKQQLTLEKKDSAQGTEDAPDNSSLELLADTSGQAENKRLKRGSPRI 600
ITQHQFLHHCSCEVKQQLTLEKKDSAQGTEDAPDNSSLELLADTSGQAENKRLKRGSPRI
Sbjct: 541 ITQHQFLHHCSCEVKQQLTLEKKDSAQGTEDAPDNSSLELLADTSGQAENKRLKRGSPRI 600
Query: 601 EEMRALRSARAPSPSEAAPRRPEATAAPLTPRGREHREAHGRALAPGRASLGSRLEDVLW 660
EEMRALRSARAPSPSEAAPRRPEATAAPLTPRGREHREAHGRALAPGRASLGSRLEDVLW
Sbjct: 601 EEMRALRSARAPSPSEAAPRRPEATAAPLTPRGREHREAHGRALAPGRASLGSRLEDVLW 660
Query: 661 LQEVSNLSEWLSPSPGP 677
LQEVSNLSEWLSPSPGP
Sbjct: 661 LQEVSNLSEWLSPSPGP 677
>gi|222446642 solute carrier family 36, member 3 isoform 1 [Homo
sapiens]
Length = 511
Score = 61.6 bits (148), Expect = 2e-09
Identities = 29/45 (64%), Positives = 32/45 (71%)
Query: 101 HCVTTRWSLTLLPRPECSGAVSAHCNLHLPGSSDSHASVPRVAGI 145
H V RW+L L PR ECSG +SAHCN HL GSS+S A RVAGI
Sbjct: 130 HAVWGRWNLALSPRLECSGKISAHCNPHLQGSSNSPAQASRVAGI 174
>gi|58533176 zinc finger, matrin type 1 isoform 1 [Homo sapiens]
Length = 638
Score = 58.2 bits (139), Expect = 3e-08
Identities = 26/35 (74%), Positives = 30/35 (85%)
Query: 114 RPECSGAVSAHCNLHLPGSSDSHASVPRVAGITDA 148
R ECSGA+SAHC+LHLPGSSDS AS ++AG TDA
Sbjct: 8 RLECSGAISAHCSLHLPGSSDSPASASQIAGTTDA 42
>gi|148839316 NIMA-related kinase 4 [Homo sapiens]
Length = 841
Score = 57.0 bits (136), Expect = 6e-08
Identities = 29/45 (64%), Positives = 31/45 (68%)
Query: 108 SLTLLPRPECSGAVSAHCNLHLPGSSDSHASVPRVAGITDAHHHA 152
SL L P+ ECSG + AH NL L GSSDS AS RVAGIT HHA
Sbjct: 457 SLALSPKLECSGTILAHSNLRLLGSSDSPASASRVAGITGVCHHA 501
>gi|219881538 hypothetical protein LOC199870 isoform 2 [Homo
sapiens]
Length = 312
Score = 56.6 bits (135), Expect = 7e-08
Identities = 26/33 (78%), Positives = 28/33 (84%)
Query: 114 RPECSGAVSAHCNLHLPGSSDSHASVPRVAGIT 146
R EC+G +SAHCNLHLPGSSDS AS RVAGIT
Sbjct: 49 RLECNGTISAHCNLHLPGSSDSPASSSRVAGIT 81
>gi|219881536 hypothetical protein LOC199870 isoform 1 [Homo
sapiens]
Length = 341
Score = 56.6 bits (135), Expect = 7e-08
Identities = 26/33 (78%), Positives = 28/33 (84%)
Query: 114 RPECSGAVSAHCNLHLPGSSDSHASVPRVAGIT 146
R EC+G +SAHCNLHLPGSSDS AS RVAGIT
Sbjct: 49 RLECNGTISAHCNLHLPGSSDSPASSSRVAGIT 81
>gi|6005810 mitogen-activated protein kinase kinase kinase kinase 1
isoform 2 [Homo sapiens]
Length = 833
Score = 55.5 bits (132), Expect = 2e-07
Identities = 34/75 (45%), Positives = 41/75 (54%), Gaps = 6/75 (8%)
Query: 78 ALLEGQLV------ISIEGLNSKHQANALHCVTTRWSLTLLPRPECSGAVSAHCNLHLPG 131
A++ GQL + + L S L T + L PR ECSG +S HCNL LPG
Sbjct: 757 AMVGGQLQAFWKHGVQVWALGSDQLLQELRDPTLTFRLLGSPRLECSGTISPHCNLLLPG 816
Query: 132 SSDSHASVPRVAGIT 146
SS+S AS RVAGIT
Sbjct: 817 SSNSPASASRVAGIT 831
>gi|118442834 RPGRIP1-like isoform a [Homo sapiens]
Length = 1315
Score = 54.3 bits (129), Expect = 4e-07
Identities = 27/44 (61%), Positives = 29/44 (65%)
Query: 108 SLTLLPRPECSGAVSAHCNLHLPGSSDSHASVPRVAGITDAHHH 151
SL L P CS A+SAHCN LPGSSD AS +V GIT A HH
Sbjct: 1099 SLALSPGLGCSSAISAHCNFRLPGSSDFPASASQVDGITGACHH 1142
>gi|111118986 alpha-1A-adrenergic receptor isoform 2 [Homo sapiens]
Length = 475
Score = 53.5 bits (127), Expect = 6e-07
Identities = 29/60 (48%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 93 SKHQANALHCVTTRWSLTLLPRPECSGAVSAHCNLHLPGSSDSHASVPRVAGITDAHHHA 152
SK Q++ C T R + R ECSG + AHCNL LPGS DS AS + AG T H A
Sbjct: 413 SKDQSS---CTTARTKSRSVTRLECSGMILAHCNLRLPGSRDSPASASQAAGTTGMCHQA 469
>gi|58331120 hypothetical protein LOC29058 isoform 1 [Homo sapiens]
Length = 183
Score = 52.4 bits (124), Expect = 1e-06
Identities = 25/37 (67%), Positives = 27/37 (72%)
Query: 106 RWSLTLLPRPECSGAVSAHCNLHLPGSSDSHASVPRV 142
RWSL L PR E SG +SAHCNLHL SSDS AS R+
Sbjct: 23 RWSLVLSPRLEPSGVISAHCNLHLLASSDSSASASRL 59
>gi|94680985 cyclin J-like [Homo sapiens]
Length = 435
Score = 51.6 bits (122), Expect = 2e-06
Identities = 25/43 (58%), Positives = 32/43 (74%), Gaps = 1/43 (2%)
Query: 99 ALHCVTTRWSLTLL-PRPECSGAVSAHCNLHLPGSSDSHASVP 140
A+ C+ ++LL PR +CSG +SAHCNLHLPGSS+S AS P
Sbjct: 86 AVSCLLLANGVSLLSPRLKCSGMISAHCNLHLPGSSNSPASAP 128
>gi|24497440 interleukin 12 receptor, beta 1 isoform 2 precursor
[Homo sapiens]
Length = 381
Score = 49.7 bits (117), Expect = 9e-06
Identities = 24/38 (63%), Positives = 26/38 (68%)
Query: 119 GAVSAHCNLHLPGSSDSHASVPRVAGITDAHHHAWLIM 156
G +SAHCNL LP S DS AS RVAGIT HH LI+
Sbjct: 342 GMISAHCNLRLPDSRDSPASASRVAGITGICHHTRLIL 379
>gi|58294160 breast carcinoma amplified sequence 4 isoform a [Homo
sapiens]
Length = 211
Score = 48.9 bits (115), Expect = 2e-05
Identities = 22/32 (68%), Positives = 25/32 (78%)
Query: 116 ECSGAVSAHCNLHLPGSSDSHASVPRVAGITD 147
ECSG + A CNL LPGSSDS AS +VAGIT+
Sbjct: 165 ECSGTIPARCNLRLPGSSDSPASASQVAGITE 196
>gi|61969666 arginine-fifty homeobox [Homo sapiens]
Length = 315
Score = 48.1 bits (113), Expect = 3e-05
Identities = 23/39 (58%), Positives = 28/39 (71%)
Query: 108 SLTLLPRPECSGAVSAHCNLHLPGSSDSHASVPRVAGIT 146
S TLL + ECSG VSA+C+L+LPGS+D S RVA T
Sbjct: 35 SFTLLSKLECSGTVSAYCSLNLPGSTDPPTSASRVAATT 73
>gi|28372523 intraflagellar transport protein IFT20 [Homo sapiens]
Length = 148
Score = 46.2 bits (108), Expect = 1e-04
Identities = 23/39 (58%), Positives = 26/39 (66%)
Query: 108 SLTLLPRPECSGAVSAHCNLHLPGSSDSHASVPRVAGIT 146
SL + PR EC+GA+SAHC L L SSDS S RV G T
Sbjct: 72 SLAVSPRLECTGAISAHCKLCLSDSSDSPTSPSRVGGTT 110
>gi|239744440 PREDICTED: hypothetical protein XP_002343124 [Homo
sapiens]
Length = 261
Score = 45.4 bits (106), Expect = 2e-04
Identities = 23/37 (62%), Positives = 26/37 (70%)
Query: 109 LTLLPRPECSGAVSAHCNLHLPGSSDSHASVPRVAGI 145
L L PR E SG +SA CNL L GSSDS AS +VAG+
Sbjct: 8 LALYPRLEFSGTISARCNLRLLGSSDSPASASQVAGL 44
>gi|239735607 nucleoredoxin-like 2 isoform 2 [Homo sapiens]
Length = 135
Score = 44.7 bits (104), Expect = 3e-04
Identities = 22/30 (73%), Positives = 23/30 (76%)
Query: 108 SLTLLPRPECSGAVSAHCNLHLPGSSDSHA 137
SL LLPR ECSG + AHCNL L GSSDS A
Sbjct: 103 SLALLPRLECSGVILAHCNLCLLGSSDSLA 132
>gi|231571356 nitric oxide synthase 3 isoform 4 [Homo sapiens]
Length = 629
Score = 44.7 bits (104), Expect = 3e-04
Identities = 22/44 (50%), Positives = 28/44 (63%)
Query: 109 LTLLPRPECSGAVSAHCNLHLPGSSDSHASVPRVAGITDAHHHA 152
LTL PR ECS ++AHC+L+L SS+ S +V G T A H A
Sbjct: 586 LTLWPRLECSSTITAHCSLNLLDSSNPPTSTSQVVGTTGACHDA 629
>gi|237858664 hypothetical protein LOC123207 isoform b [Homo
sapiens]
Length = 167
Score = 44.7 bits (104), Expect = 3e-04
Identities = 24/40 (60%), Positives = 26/40 (65%)
Query: 99 ALHCVTTRWSLTLLPRPECSGAVSAHCNLHLPGSSDSHAS 138
AL R +L L P+ ECSG V AHCNLHL GSS S AS
Sbjct: 126 ALFFFFLRQNLALSPKLECSGVVLAHCNLHLLGSSYSPAS 165
>gi|217035093 cyclic nucleotide gated channel alpha 1 isoform 1
[Homo sapiens]
Length = 759
Score = 43.9 bits (102), Expect = 5e-04
Identities = 18/22 (81%), Positives = 20/22 (90%)
Query: 113 PRPECSGAVSAHCNLHLPGSSD 134
PR ECSGA+SAHC+LHLP SSD
Sbjct: 7 PRLECSGAISAHCSLHLPDSSD 28
>gi|51243063 MAD2L1 binding protein isoform 1 [Homo sapiens]
Length = 306
Score = 43.9 bits (102), Expect = 5e-04
Identities = 24/40 (60%), Positives = 26/40 (65%)
Query: 108 SLTLLPRPECSGAVSAHCNLHLPGSSDSHASVPRVAGITD 147
SLTL PR E +G SAH N LPGS DS AS +VA I D
Sbjct: 9 SLTLSPRLEHNGMTSAHHNFRLPGSRDSPASASQVAEIID 48
>gi|239755619 PREDICTED: hypothetical protein [Homo sapiens]
Length = 261
Score = 42.7 bits (99), Expect = 0.001
Identities = 21/33 (63%), Positives = 24/33 (72%)
Query: 113 PRPECSGAVSAHCNLHLPGSSDSHASVPRVAGI 145
PR E SG +SA CNL L GSSDS AS +VAG+
Sbjct: 12 PRLEFSGTISARCNLRLLGSSDSPASASQVAGL 44
>gi|239750132 PREDICTED: hypothetical protein XP_002347267 [Homo
sapiens]
Length = 261
Score = 42.7 bits (99), Expect = 0.001
Identities = 21/33 (63%), Positives = 24/33 (72%)
Query: 113 PRPECSGAVSAHCNLHLPGSSDSHASVPRVAGI 145
PR E SG +SA CNL L GSSDS AS +VAG+
Sbjct: 12 PRLEFSGTISARCNLRLLGSSDSPASASQVAGL 44
>gi|40807368 potassium channel regulator isoform 2 [Homo sapiens]
Length = 229
Score = 42.7 bits (99), Expect = 0.001
Identities = 21/30 (70%), Positives = 23/30 (76%)
Query: 117 CSGAVSAHCNLHLPGSSDSHASVPRVAGIT 146
C+G +SAH NL L GSSDS AS RVAGIT
Sbjct: 196 CNGVISAHHNLRLWGSSDSPASASRVAGIT 225
>gi|66348062 fumarylacetoacetate hydrolase domain containing 1
isoform 1 [Homo sapiens]
Length = 248
Score = 42.4 bits (98), Expect = 0.001
Identities = 18/29 (62%), Positives = 23/29 (79%)
Query: 106 RWSLTLLPRPECSGAVSAHCNLHLPGSSD 134
R LTL P+ ECS A++AHC+L LPGSS+
Sbjct: 213 RQGLTLSPKLECSSAITAHCSLELPGSSN 241
>gi|34147532 myosin, light chain 10, regulatory [Homo sapiens]
Length = 226
Score = 42.0 bits (97), Expect = 0.002
Identities = 22/47 (46%), Positives = 29/47 (61%)
Query: 108 SLTLLPRPECSGAVSAHCNLHLPGSSDSHASVPRVAGITDAHHHAWL 154
SL L PR E +G +SAHCNL L GSS+S AS + I D + ++
Sbjct: 58 SLALSPRLERNGMISAHCNLCLTGSSNSPASASQAFTIMDQNRDGFI 104
>gi|239757631 PREDICTED: hypothetical protein XP_002345506 [Homo
sapiens]
Length = 127
Score = 39.3 bits (90), Expect = 0.012
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 106 RWSLTLLPRPECSGAVSAHCNLHLPGSSDSHASVPRVAGITDAHHHAWLI 155
R LTL R EC GA++A + L GS + SV ++A IT+ +H LI
Sbjct: 61 RLGLTLSSRLECCGAITAQGSFDLMGSGNPFTSVDQIAEITNVGNHTLLI 110
>gi|239752121 PREDICTED: hypothetical protein XP_002348120 [Homo
sapiens]
Length = 127
Score = 39.3 bits (90), Expect = 0.012
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 106 RWSLTLLPRPECSGAVSAHCNLHLPGSSDSHASVPRVAGITDAHHHAWLI 155
R LTL R EC GA++A + L GS + SV ++A IT+ +H LI
Sbjct: 61 RLGLTLSSRLECCGAITAQGSFDLMGSGNPFTSVDQIAEITNVGNHTLLI 110
>gi|239746631 PREDICTED: hypothetical protein XP_002344231 [Homo
sapiens]
Length = 127
Score = 39.3 bits (90), Expect = 0.012
Identities = 21/50 (42%), Positives = 29/50 (58%)
Query: 106 RWSLTLLPRPECSGAVSAHCNLHLPGSSDSHASVPRVAGITDAHHHAWLI 155
R LTL R EC GA++A + L GS + SV ++A IT+ +H LI
Sbjct: 61 RLGLTLSSRLECCGAITAQGSFDLMGSGNPFTSVDQIAEITNVGNHTLLI 110
>gi|78000165 sorbin and SH3 domain containing 1 isoform 4 [Homo
sapiens]
Length = 1151
Score = 39.3 bits (90), Expect = 0.012
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 105 TRWSLTLLPRPECSGAVSAHCNLHLPGSSDSHASVPRVAGITD 147
T+ + PR ECSG V AHC+L L SS+ S +VAG D
Sbjct: 434 TKSCSVMSPRLECSGTVIAHCSLKLLDSSNPPTSASQVAGTAD 476
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.132 0.399
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,057,784
Number of Sequences: 37866
Number of extensions: 1189146
Number of successful extensions: 5090
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 53
Number of HSP's successfully gapped in prelim test: 55
Number of HSP's that attempted gapping in prelim test: 5015
Number of HSP's gapped (non-prelim): 128
length of query: 677
length of database: 18,247,518
effective HSP length: 109
effective length of query: 568
effective length of database: 14,120,124
effective search space: 8020230432
effective search space used: 8020230432
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.