Guide to the Human Genome
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Name: MAD2L1BP Sequence: fasta or formatted (306aa) NCBI GI: 51243063
Description:

MAD2L1 binding protein isoform 1

Referenced in:

Spindle, M phase, and Meiosis

Other entries for this name:
alt prot [274aa] MAD2L1 binding protein isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             7.8         24           2
 C cysteine            2.9          9           2
 D aspartate           2.9          9           1
 E glutamate           8.2         25           2
 F phenylalanine       4.9         15           2
 G glycine             4.2         13           2
 H histidine           2.9          9           2
 I isoleucine          2.6          8           2
 K lysine              3.9         12           3
 L leucine            11.8         36           2
 M methionine          2.6          8           1
 N asparagine          2.0          6           1
 P proline             7.5         23           2
 Q glutamine           5.2         16           2
 R arginine            7.2         22           2
 S serine              8.8         27           2
 T threonine           5.2         16           2
 V valine              5.2         16           2
 W tryptophan          1.3          4           1
 Y tyrosine            2.6          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   MAD2L1 binding protein isoform 1 
MAD2L1BP              0.848   MAD2L1 binding protein isoform 2 
MYL10                 0.045   myosin, light chain 10, regulatory 
NEK4                  0.040   NIMA-related kinase 4 
ADRA1A                0.037   alpha-1A-adrenergic receptor isoform 2 
ZMAT1                 0.037   zinc finger, matrin type 1 isoform 1 
RPGRIP1L              0.035   RPGRIP1-like isoform a 
FAM76A                0.035   hypothetical protein LOC199870 isoform 2 
FAM76A                0.035   hypothetical protein LOC199870 isoform 1 
KCNRG                 0.033   potassium channel regulator isoform 2 
LOC100289388          0.032   PREDICTED: hypothetical protein XP_002343124 
C11orf80              0.032   hypothetical protein LOC79703 
MAP4K1                0.030   mitogen-activated protein kinase kinase kinase kinase...
SLC36A3               0.028   solute carrier family 36, member 3 isoform 1 
IL12RB1               0.028   interleukin 12 receptor, beta 1 isoform 2 precursor ...
LOC100293423          0.028   PREDICTED: hypothetical protein 
LOC100290837          0.028   PREDICTED: hypothetical protein XP_002347267 
CCNJL                 0.028   cyclin J-like 
C20orf30              0.027   hypothetical protein LOC29058 isoform 1 
ARGFX                 0.025   arginine-fifty homeobox 
SYT14                 0.023   synaptotagmin XIV isoform 2 
SYT14                 0.023   synaptotagmin XIV isoform 1 
BCAS4                 0.023   breast carcinoma amplified sequence 4 isoform a [Hom...
C15orf40              0.022   hypothetical protein LOC123207 isoform b 
TRIM54                0.022   ring finger protein 30 isoform 1 
PACRG                 0.020   parkin co-regulated gene protein isoform 1 
IFT20                 0.020   intraflagellar transport protein IFT20 
IFT81                 0.018   intraflagellar transport 81-like isoform 2 
TCEANC                0.017   TFIIS central domain-containing protein 1 
NXNL2                 0.015   nucleoredoxin-like 2 isoform 2 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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