Guide to the Human Genome
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Name: FAHD1 Sequence: fasta or formatted (248aa) NCBI GI: 66348062
Description:

fumarylacetoacetate hydrolase domain containing 1 isoform 1

Referenced in:

Additional Enzymes and Related Sequences

Other entries for this name:
alt prot [224aa] fumarylacetoacetate hydrolase domain containing 1 isoform 2
alt prot [226aa] fumarylacetoacetate hydrolase domain containing 1 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             8.1         20           3
 C cysteine            2.8          7           1
 D aspartate           3.2          8           1
 E glutamate           7.7         19           2
 F phenylalanine       2.4          6           1
 G glycine             7.7         19           2
 H histidine           2.4          6           2
 I isoleucine          6.0         15           2
 K lysine              6.5         16           3
 L leucine             9.7         24           1
 M methionine          3.2          8           1
 N asparagine          2.4          6           1
 P proline             7.7         19           2
 Q glutamine           1.2          3           1
 R arginine            4.8         12           1
 S serine              8.9         22           2
 T threonine           4.4         11           1
 V valine              6.5         16           2
 W tryptophan          1.6          4           1
 Y tyrosine            2.8          7           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   fumarylacetoacetate hydrolase domain containing 1 is... 
FAHD1                 0.852   fumarylacetoacetate hydrolase domain containing 1 i...
FAHD1                 0.852   fumarylacetoacetate hydrolase domain containing 1 is...
FAHD2A                0.249   fumarylacetoacetate hydrolase domain containing 2A ...
FAHD2B                0.247   fumarylacetoacetate hydrolase domain containing 2B [...
NOS3                  0.060   nitric oxide synthase 3 isoform 4 
C15orf40              0.054   hypothetical protein LOC123207 isoform b 
IFT81                 0.048   intraflagellar transport 81-like isoform 2 
RPGRIP1L              0.048   RPGRIP1-like isoform a 
CCNJL                 0.042   cyclin J-like 
TRIM54                0.042   ring finger protein 30 isoform 1 
ARGFX                 0.040   arginine-fifty homeobox 
SORBS1                0.040   sorbin and SH3 domain containing 1 isoform 4 
SLC36A3               0.037   solute carrier family 36, member 3 isoform 1 
MAP4K1                0.037   mitogen-activated protein kinase kinase kinase kinase...
C11orf80              0.035   hypothetical protein LOC79703 
NEK4                  0.035   NIMA-related kinase 4 
ZMAT1                 0.035   zinc finger, matrin type 1 isoform 1 
MYL10                 0.031   myosin, light chain 10, regulatory 
CNGA1                 0.031   cyclic nucleotide gated channel alpha 1 isoform 1 [...
FAM76A                0.029   hypothetical protein LOC199870 isoform 2 
FAM76A                0.029   hypothetical protein LOC199870 isoform 1 
LOC100291717          0.029   PREDICTED: hypothetical protein XP_002345506 
LOC100291522          0.029   PREDICTED: hypothetical protein XP_002348120 
LOC100287576          0.029   PREDICTED: hypothetical protein XP_002344231 
IFT20                 0.027   intraflagellar transport protein IFT20 
PACRG                 0.025   parkin co-regulated gene protein isoform 1 
ADRA1A                0.023   alpha-1A-adrenergic receptor isoform 2 
LOC100289388          0.023   PREDICTED: hypothetical protein XP_002343124 
C20orf30              0.023   hypothetical protein LOC29058 isoform 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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