Guide to the Human Genome
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Name: CABLES1 Sequence: fasta or formatted (368aa) NCBI GI: 24308408
Description:

Cdk5 and Abl enzyme substrate 1 isoform 1

Not currently referenced in the text

Other entries for this name:
alt prot {633aa} Cdk5 and Abl enzyme substrate 1 isoform 2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         19           2
 C cysteine            1.9          7           1
 D aspartate           5.7         21           2
 E glutamate           6.0         22           2
 F phenylalanine       5.2         19           1
 G glycine             6.2         23           2
 H histidine           3.0         11           1
 I isoleucine          5.4         20           2
 K lysine              8.2         30           2
 L leucine            12.0         44           2
 M methionine          2.2          8           1
 N asparagine          3.3         12           1
 P proline             4.3         16           1
 Q glutamine           3.0         11           1
 R arginine            8.4         31           2
 S serine              8.4         31           2
 T threonine           4.6         17           2
 V valine              4.6         17           1
 W tryptophan          0.3          1           1
 Y tyrosine            2.2          8           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   Cdk5 and Abl enzyme substrate 1 isoform 1 
CABLES1               0.949   Cdk5 and Abl enzyme substrate 1 isoform 2 
CABLES2               0.567   Cdk5 and Abl enzyme substrate 2 
CCNT2                 0.010   cyclin T2 isoform b 
CCNT2                 0.010   cyclin T2 isoform a 
CPS1                  0.007   carbamoyl-phosphate synthetase 1 isoform c 
CPS1                  0.007   carbamoyl-phosphate synthetase 1 isoform a precurso...
CPS1                  0.007   carbamoyl-phosphate synthetase 1 isoform b precursor...
CCNC                  0.007   cyclin C isoform a 
TP53BP2               0.007   tumor protein p53 binding protein, 2 isoform 1 [Hom...
TP53BP2               0.007   tumor protein p53 binding protein, 2 isoform 2 
LEF1                  0.006   lymphoid enhancer-binding factor 1 isoform 3 
LEF1                  0.006   lymphoid enhancer-binding factor 1 isoform 2 
LEF1                  0.006   lymphoid enhancer-binding factor 1 isoform 1 
TCF7L1                0.006   HMG-box transcription factor TCF-3 
CENPF                 0.006   centromere protein F 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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