Guide to the Human Genome
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Name: GABRA3 Sequence: fasta or formatted (492aa) NCBI GI: 4557603
Description:

gamma-aminobutyric acid A receptor, alpha 3 precursor

Referenced in:

GABA and Glycine

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.5         32           2
 C cysteine            1.0          5           1
 D aspartate           5.3         26           2
 E glutamate           3.9         19           1
 F phenylalanine       5.1         25           2
 G glycine             5.3         26           2
 H histidine           2.2         11           1
 I isoleucine          7.1         35           2
 K lysine              6.3         31           3
 L leucine             7.9         39           2
 M methionine          2.8         14           1
 N asparagine          3.9         19           2
 P proline             5.3         26           1
 Q glutamine           2.2         11           1
 R arginine            4.1         20           2
 S serine              7.1         35           2
 T threonine          11.0         54           2
 V valine              7.3         36           2
 W tryptophan          1.6          8           1
 Y tyrosine            4.1         20           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   gamma-aminobutyric acid A receptor, alpha 3 precursor... 
GABRA5                0.641   gamma-aminobutyric acid (GABA) A receptor, alpha 5 pr...
GABRA2                0.634   gamma-aminobutyric acid A receptor, alpha 2 
GABRA2                0.634   gamma-aminobutyric acid A receptor, alpha 2 precurs...
GABRA1                0.633   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.633   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.633   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.633   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.633   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.633   gamma-aminobutyric acid (GABA) A receptor, alpha 1 ...
GABRA1                0.633   gamma-aminobutyric acid (GABA) A receptor, alpha 1 p...
GABRA6                0.507   gamma-aminobutyric acid A receptor, alpha 6 precurs...
GABRA4                0.500   gamma-aminobutyric acid A receptor, alpha 4 precurso...
GABRG2                0.370   gamma-aminobutyric acid A receptor, gamma 2 isoform ...
GABRG2                0.369   gamma-aminobutyric acid A receptor, gamma 2 isoform ...
GABRG1                0.365   gamma-aminobutyric acid A receptor, gamma 1 precurso...
GABRG2                0.347   gamma-aminobutyric acid A receptor, gamma 2 isoform...
GABRG3                0.340   gamma-aminobutyric acid (GABA) A receptor, gamma 3 ...
GABRE                 0.288   gamma-aminobutyric acid (GABA) A receptor, epsilon p...
GABRB3                0.259   gamma-aminobutyric acid (GABA) A receptor, beta 3 is...
GABRB3                0.259   gamma-aminobutyric acid (GABA) A receptor, beta 3 iso...
GABRB2                0.259   gamma-aminobutyric acid (GABA) A receptor, beta 2 iso...
GLRA1                 0.254   glycine receptor, alpha 1 isoform 2 precursor [Homo...
GABRB1                0.254   gamma-aminobutyric acid (GABA) A receptor, beta 1 p...
GLRA2                 0.253   glycine receptor, alpha 2 isoform A 
GLRA3                 0.253   glycine receptor, alpha 3 isoform b 
GLRA2                 0.253   glycine receptor, alpha 2 isoform A 
GLRA2                 0.253   glycine receptor, alpha 2 isoform B 
GLRA1                 0.252   glycine receptor, alpha 1 isoform 1 precursor [Homo...
GLRA3                 0.251   glycine receptor, alpha 3 isoform a 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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