Search of human proteins with 169636418

Search of human proteins with 169636418

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169636418 mitochondrial ribosomal protein L38 [Homo sapiens]
         (380 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169636418 mitochondrial ribosomal protein L38 [Homo sapiens]       807   0.0  
gi|4505621 prostatic binding protein [Homo sapiens]                    80   2e-15
gi|116812622 phosphatidylethanolamine-binding protein 4 [Homo sa...    35   0.11 
gi|55741447 pleckstrin homology domain containing, family H (wit...    35   0.11 
gi|22758136 MAP7 domain containing 2 [Homo sapiens]                    34   0.19 
gi|110349719 titin isoform N2-A [Homo sapiens]                         32   0.95 
gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo sap...    32   1.2  
gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo sap...    32   1.2  
gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo sap...    32   1.2  
gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo sapi...    32   1.2  
gi|4759208 TAO kinase 2 isoform 1 [Homo sapiens]                       31   1.6  
gi|45505130 TAO kinase 2 isoform 2 [Homo sapiens]                      31   1.6  
gi|11693132 UPF2 regulator of nonsense transcripts homolog [Homo...    31   1.6  
gi|18375676 UPF2 regulator of nonsense transcripts homolog [Homo...    31   1.6  
gi|40217801 hypothetical protein LOC79864 isoform 2 [Homo sapiens]     31   1.6  
gi|111955084 5-azacytidine induced 1 isoform a [Homo sapiens]          31   1.6  
gi|153082722 intercellular adhesion molecule 2 precursor [Homo s...    31   2.1  
gi|153082719 intercellular adhesion molecule 2 precursor [Homo s...    31   2.1  
gi|153082699 intercellular adhesion molecule 2 precursor [Homo s...    31   2.1  
gi|153082686 intercellular adhesion molecule 2 precursor [Homo s...    31   2.1  
gi|153082696 intercellular adhesion molecule 2 precursor [Homo s...    31   2.1  
gi|15042961 HLA-B associated transcript 4 [Homo sapiens]               31   2.1  
gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isof...    30   3.6  
gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isof...    30   3.6  
gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isof...    30   3.6  
gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isof...    30   3.6  
gi|5031873 lectin, mannose-binding, 1 precursor [Homo sapiens]         30   4.7  
gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isof...    30   4.7  
gi|148886692 FAT tumor suppressor homolog 3 [Homo sapiens]             30   4.7  
gi|31542634 filamin A interacting protein 1 [Homo sapiens]             30   4.7  

>gi|169636418 mitochondrial ribosomal protein L38 [Homo sapiens]
          Length = 380

 Score =  807 bits (2084), Expect = 0.0
 Identities = 380/380 (100%), Positives = 380/380 (100%)

Query: 1   MAAPWWRAALCECRRWRGFSTSAVLGRRTPPLGPMPNSDIDLSNLERLEKYRSFDRYRRR 60
           MAAPWWRAALCECRRWRGFSTSAVLGRRTPPLGPMPNSDIDLSNLERLEKYRSFDRYRRR
Sbjct: 1   MAAPWWRAALCECRRWRGFSTSAVLGRRTPPLGPMPNSDIDLSNLERLEKYRSFDRYRRR 60

Query: 61  AEQEAQAPHWWRTYREYFGEKTDPKEKIDIGLPPPKVSRTQQLLERKQAIQELRANVEEE 120
           AEQEAQAPHWWRTYREYFGEKTDPKEKIDIGLPPPKVSRTQQLLERKQAIQELRANVEEE
Sbjct: 61  AEQEAQAPHWWRTYREYFGEKTDPKEKIDIGLPPPKVSRTQQLLERKQAIQELRANVEEE 120

Query: 121 RAARLRTASVPLDAVRAEWERTCGPYHKQRLAEYYGLYRDLFHGATFVPRVPLHVAYAVG 180
           RAARLRTASVPLDAVRAEWERTCGPYHKQRLAEYYGLYRDLFHGATFVPRVPLHVAYAVG
Sbjct: 121 RAARLRTASVPLDAVRAEWERTCGPYHKQRLAEYYGLYRDLFHGATFVPRVPLHVAYAVG 180

Query: 181 EDDLMPVYCGNEVTPTEAAQAPEVTYEAEEGSLWTLLLTSLDGHLLEPDAEYLHWLLTNI 240
           EDDLMPVYCGNEVTPTEAAQAPEVTYEAEEGSLWTLLLTSLDGHLLEPDAEYLHWLLTNI
Sbjct: 181 EDDLMPVYCGNEVTPTEAAQAPEVTYEAEEGSLWTLLLTSLDGHLLEPDAEYLHWLLTNI 240

Query: 241 PGNRVAEGQVTCPYLPPFPARGSGIHRLAFLLFKQDQPIDFSEDARPSPCYQLAQRTFRT 300
           PGNRVAEGQVTCPYLPPFPARGSGIHRLAFLLFKQDQPIDFSEDARPSPCYQLAQRTFRT
Sbjct: 241 PGNRVAEGQVTCPYLPPFPARGSGIHRLAFLLFKQDQPIDFSEDARPSPCYQLAQRTFRT 300

Query: 301 FDFYKKHQETMTPAGLSFFQCRWDDSVTYIFHQLLDMREPVFEFVRPPPYHPKQKRFPHR 360
           FDFYKKHQETMTPAGLSFFQCRWDDSVTYIFHQLLDMREPVFEFVRPPPYHPKQKRFPHR
Sbjct: 301 FDFYKKHQETMTPAGLSFFQCRWDDSVTYIFHQLLDMREPVFEFVRPPPYHPKQKRFPHR 360

Query: 361 QPLRYLDRYRDSHEPTYGIY 380
           QPLRYLDRYRDSHEPTYGIY
Sbjct: 361 QPLRYLDRYRDSHEPTYGIY 380


>gi|4505621 prostatic binding protein [Homo sapiens]
          Length = 187

 Score = 80.5 bits (197), Expect = 2e-15
 Identities = 52/170 (30%), Positives = 88/170 (51%), Gaps = 10/170 (5%)

Query: 169 PRVPLHVAYAVGEDDLMPVYCGNEVTPTEAAQAP-EVTYEA-EEGSLWTLLLTSLDGHLL 226
           P+ PLHV YA    D +    G  +TPT+    P  ++++  + G L+TL+LT  D    
Sbjct: 21  PQHPLHVTYAGAAVDEL----GKVLTPTQVKNRPTSISWDGLDSGKLYTLVLTDPDAPSR 76

Query: 227 EPDA--EYLHWLLTNIPGNRVAEGQVTCPYLPPFPARGSGIHRLAFLLFKQDQPIDFSED 284
           +     E+ H+L+ N+ GN ++ G V   Y+   P +G+G+HR  +L+++QD+P+   E 
Sbjct: 77  KDPKYREWHHFLVVNMKGNDISSGTVLSDYVGSGPPKGTGLHRYVWLVYEQDRPLKCDEP 136

Query: 285 ARPSPCYQLAQRTFRTFDFYKKHQETMTPAGLSFFQCRWDDSVTYIFHQL 334
              +      +  F+   F KK+ E   P   + +Q  WDD V  ++ QL
Sbjct: 137 ILSNRSGD-HRGKFKVASFRKKY-ELRAPVAGTCYQAEWDDYVPKLYEQL 184


>gi|116812622 phosphatidylethanolamine-binding protein 4 [Homo
           sapiens]
          Length = 227

 Score = 35.0 bits (79), Expect = 0.11
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 6/75 (8%)

Query: 208 AEEGSLWTLLLTSLDG-HLLEPDAEYL-HWLLTNIPGNRVAEGQVT----CPYLPPFPAR 261
           A +G+ + L++   D     EP   +  HWL+T+I G  + +G++       Y  P P  
Sbjct: 84  AVDGATYILVMVDPDAPSRAEPRQRFWRHWLVTDIKGADLKKGKIQGQELSAYQAPSPPA 143

Query: 262 GSGIHRLAFLLFKQD 276
            SG HR  F ++ Q+
Sbjct: 144 HSGFHRYQFFVYLQE 158


>gi|55741447 pleckstrin homology domain containing, family H (with
           MyTH4 domain) member 1 [Homo sapiens]
          Length = 1364

 Score = 35.0 bits (79), Expect = 0.11
 Identities = 25/91 (27%), Positives = 41/91 (45%), Gaps = 2/91 (2%)

Query: 97  VSRTQQLLERKQAIQELRANVEEERAARLRTASVPLDAVRAEWERTCGPYHKQRLAEYYG 156
           +S+ +  LE+++ ++   A   +E+AA+++   V L   + E E      H QRL E  G
Sbjct: 103 ISQLEAQLEKQKQMRAEEAKTVQEKAAKIK-EWVTLKLAKLEMENQHLKSHNQRLVEQVG 161

Query: 157 LYRDLFHGATFVPRVPLHV-AYAVGEDDLMP 186
             +D        P   L V  Y   E D +P
Sbjct: 162 SLQDALEAIQIAPSRKLLVPPYGAAEQDSVP 192


>gi|22758136 MAP7 domain containing 2 [Homo sapiens]
          Length = 732

 Score = 34.3 bits (77), Expect = 0.19
 Identities = 29/108 (26%), Positives = 52/108 (48%), Gaps = 1/108 (0%)

Query: 45  LERLEKYRSFDRYRRRAEQEAQAPHWWRTYREYFGEKTDPKEKIDIGLPPPKVSRTQQLL 104
           LER E  R  +  R R E+EA+     R  +E   +K + +EK   G    + +  + LL
Sbjct: 431 LEREELKRKAEEERLRLEEEARKQEEERKRQEEEKKKQEGEEKRKAGEEAKRKAEEELLL 490

Query: 105 ERKQAIQ-ELRANVEEERAARLRTASVPLDAVRAEWERTCGPYHKQRL 151
           + KQ  + + +A +E+++ A    A    + +R E E+      ++RL
Sbjct: 491 KEKQEQEKQEKAMIEKQKEAAETKAREVAEQMRLEREQIMLQIEQERL 538


>gi|110349719 titin isoform N2-A [Homo sapiens]
          Length = 33423

 Score = 32.0 bits (71), Expect = 0.95
 Identities = 41/200 (20%), Positives = 76/200 (38%), Gaps = 22/200 (11%)

Query: 39   DIDLSNLERLEKYRSFDRYRRRAEQEAQAPHWWRTYREYFGEKTDPKEKIDIGLPP---- 94
            + D    E  E    +D+Y    E+E      +  Y E+    T+P++ I +   P    
Sbjct: 9750 EYDYKEFEEYEPTEEYDQYEEYEERE------YERYEEHEEYITEPEKPIPVKPVPEEPV 9803

Query: 95   PKVSRTQQLLERKQAIQELRANVEEERAARLRTASVPLDAVRAEWERTCGPYHKQRLAEY 154
            P   +       K+A+ E +  V   +  +     VP +  +   E       K R++  
Sbjct: 9804 PTKPKAPPAKVLKKAVPEEKVPVPIPKKLKPPPPKVPEEPKKVFEE-------KIRISIT 9856

Query: 155  YGLYRDLFHGATFVPRVPLHVAYAVGEDDLMPVYCGNEVTPTEAAQAPEVTYEAEEGSLW 214
                  +   A  VP  P  V      ++ +PV       P    + P+   E EE +  
Sbjct: 9857 KREKEQVTEPAAKVPMKPKRVV----AEEKVPVPRKEVAPPVRVPEVPK-ELEPEEVAFE 9911

Query: 215  TLLLTSLDGHLLEPDAEYLH 234
              ++T ++ +L+E + EY+H
Sbjct: 9912 EEVVTHVEEYLVEEEEEYIH 9931


>gi|156766047 GRB10 interacting GYF protein 2 isoform c [Homo
           sapiens]
          Length = 1293

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 11/113 (9%)

Query: 42  LSNLERLEKYRSFDRYRRRAEQEAQAPHWWRTYREYFGEKTDPKEKIDIGLPPPKVSRTQ 101
           L  L++LEK ++    + R E E +A            E+ + K + ++     ++ R Q
Sbjct: 717 LEQLQQLEKAKAAKLEQERREAEMRAKR----------EEEERKRQEELRRQQEEILRRQ 766

Query: 102 QLLERKQAIQE-LRANVEEERAARLRTASVPLDAVRAEWERTCGPYHKQRLAE 153
           Q  ERK+  +E L    +EE   R R   + L   R E ER       +RL E
Sbjct: 767 QEEERKRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQEEALRRLEE 819


>gi|156766045 GRB10 interacting GYF protein 2 isoform a [Homo
           sapiens]
          Length = 1320

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 11/113 (9%)

Query: 42  LSNLERLEKYRSFDRYRRRAEQEAQAPHWWRTYREYFGEKTDPKEKIDIGLPPPKVSRTQ 101
           L  L++LEK ++    + R E E +A            E+ + K + ++     ++ R Q
Sbjct: 744 LEQLQQLEKAKAAKLEQERREAEMRAKR----------EEEERKRQEELRRQQEEILRRQ 793

Query: 102 QLLERKQAIQE-LRANVEEERAARLRTASVPLDAVRAEWERTCGPYHKQRLAE 153
           Q  ERK+  +E L    +EE   R R   + L   R E ER       +RL E
Sbjct: 794 QEEERKRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQEEALRRLEE 846


>gi|156766043 GRB10 interacting GYF protein 2 isoform b [Homo
           sapiens]
          Length = 1299

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 11/113 (9%)

Query: 42  LSNLERLEKYRSFDRYRRRAEQEAQAPHWWRTYREYFGEKTDPKEKIDIGLPPPKVSRTQ 101
           L  L++LEK ++    + R E E +A            E+ + K + ++     ++ R Q
Sbjct: 723 LEQLQQLEKAKAAKLEQERREAEMRAKR----------EEEERKRQEELRRQQEEILRRQ 772

Query: 102 QLLERKQAIQE-LRANVEEERAARLRTASVPLDAVRAEWERTCGPYHKQRLAE 153
           Q  ERK+  +E L    +EE   R R   + L   R E ER       +RL E
Sbjct: 773 QEEERKRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQEEALRRLEE 825


>gi|42476299 GRB10 interacting GYF protein 2 isoform b [Homo
           sapiens]
          Length = 1299

 Score = 31.6 bits (70), Expect = 1.2
 Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 11/113 (9%)

Query: 42  LSNLERLEKYRSFDRYRRRAEQEAQAPHWWRTYREYFGEKTDPKEKIDIGLPPPKVSRTQ 101
           L  L++LEK ++    + R E E +A            E+ + K + ++     ++ R Q
Sbjct: 723 LEQLQQLEKAKAAKLEQERREAEMRAKR----------EEEERKRQEELRRQQEEILRRQ 772

Query: 102 QLLERKQAIQE-LRANVEEERAARLRTASVPLDAVRAEWERTCGPYHKQRLAE 153
           Q  ERK+  +E L    +EE   R R   + L   R E ER       +RL E
Sbjct: 773 QEEERKRREEEELARRKQEEALRRQREQEIALRRQREEEERQQQEEALRRLEE 825


>gi|4759208 TAO kinase 2 isoform 1 [Homo sapiens]
          Length = 1049

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 10/87 (11%)

Query: 75  REYFGEKTDPKEKIDIGLPPPKVSRTQQLLERKQAIQELRANVEEERAARLRTASVPLDA 134
           R Y   K   KE++      PK  + + LL +K+ +Q+ +A   EE A  LR        
Sbjct: 585 RTYKLRKEQLKEELQENPSTPKREKAEWLLRQKEQLQQCQA---EEEAGLLRRQ------ 635

Query: 135 VRAEWERTCGPYHKQRLAEYYGLYRDL 161
            R  +E  C  Y ++ L   + L +DL
Sbjct: 636 -RQYFELQCRQYKRKMLLARHSLDQDL 661


>gi|45505130 TAO kinase 2 isoform 2 [Homo sapiens]
          Length = 1235

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 25/87 (28%), Positives = 39/87 (44%), Gaps = 10/87 (11%)

Query: 75  REYFGEKTDPKEKIDIGLPPPKVSRTQQLLERKQAIQELRANVEEERAARLRTASVPLDA 134
           R Y   K   KE++      PK  + + LL +K+ +Q+ +A   EE A  LR        
Sbjct: 585 RTYKLRKEQLKEELQENPSTPKREKAEWLLRQKEQLQQCQA---EEEAGLLRRQ------ 635

Query: 135 VRAEWERTCGPYHKQRLAEYYGLYRDL 161
            R  +E  C  Y ++ L   + L +DL
Sbjct: 636 -RQYFELQCRQYKRKMLLARHSLDQDL 661


>gi|11693132 UPF2 regulator of nonsense transcripts homolog [Homo
           sapiens]
          Length = 1272

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 17/121 (14%)

Query: 27  RRTPPLGPMPNSDIDLSNLERL------EKYRSFDRYRRRAEQEAQAPHWWRTYREYFGE 80
           RRT      P  DI L+  + +      +K R  D  R++ ++E +     +   E   +
Sbjct: 28  RRTVSSKERPKDDIKLTAKKEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESK 87

Query: 81  KTDPKEKIDIGLPPPKVSRTQQLLERKQAIQELRANVEEERAARLRTASVPLDAVRAEWE 140
           K + +EK           +  Q  ERK+  ++ +   EEE AA+++     +   +  WE
Sbjct: 88  KKEEEEK-----------KKHQEEERKKQEEQAKRQQEEEAAAQMKEKEESIQLHQEAWE 136

Query: 141 R 141
           R
Sbjct: 137 R 137


>gi|18375676 UPF2 regulator of nonsense transcripts homolog [Homo
           sapiens]
          Length = 1272

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 28/121 (23%), Positives = 51/121 (42%), Gaps = 17/121 (14%)

Query: 27  RRTPPLGPMPNSDIDLSNLERL------EKYRSFDRYRRRAEQEAQAPHWWRTYREYFGE 80
           RRT      P  DI L+  + +      +K R  D  R++ ++E +     +   E   +
Sbjct: 28  RRTVSSKERPKDDIKLTAKKEVSKAPEDKKKRLEDDKRKKEDKERKKKDEEKVKAEEESK 87

Query: 81  KTDPKEKIDIGLPPPKVSRTQQLLERKQAIQELRANVEEERAARLRTASVPLDAVRAEWE 140
           K + +EK           +  Q  ERK+  ++ +   EEE AA+++     +   +  WE
Sbjct: 88  KKEEEEK-----------KKHQEEERKKQEEQAKRQQEEEAAAQMKEKEESIQLHQEAWE 136

Query: 141 R 141
           R
Sbjct: 137 R 137


>gi|40217801 hypothetical protein LOC79864 isoform 2 [Homo sapiens]
          Length = 307

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 12/115 (10%)

Query: 27  RRTPPLGPMPNSDIDLSNLERLEKYRSFDRYRRRAEQEAQAPHWWRTYREYFGEKTDPKE 86
           RR+ P   + +SD++  +       +S   +       ++ P   R  +++F EK     
Sbjct: 205 RRSKPFSELSDSDLEEKSSSLSPYVKSSSSHNEVFLPGSRGPRR-RKSKQHFVEKN---- 259

Query: 87  KIDIGLPPPKVSRTQQLLERKQAIQELRANVEEERAARLRTASVPLDAVRAEWER 141
           K+ +GLP PK     QL  +K      R     E+   LR  S+P D  +  W +
Sbjct: 260 KLTLGLPTPKTDSYLQLHNKK------RGESHPEQVI-LRVNSLPRDGFKTFWSQ 307


>gi|111955084 5-azacytidine induced 1 isoform a [Homo sapiens]
          Length = 1080

 Score = 31.2 bits (69), Expect = 1.6
 Identities = 24/97 (24%), Positives = 43/97 (44%), Gaps = 13/97 (13%)

Query: 45  LERLEKYRSFDRYRRRAEQEAQAPHWWRTYREYFGEKTDPKEKIDIGLPPPKVSRTQQLL 104
           L + E+ R+  R+++  EQE  A    R  +  + E  + +E++            QQ  
Sbjct: 763 LGQQERERARQRFQQHLEQEQWALQQQR--QRLYSEVAEERERLG-----------QQAA 809

Query: 105 ERKQAIQELRANVEEERAARLRTASVPLDAVRAEWER 141
            ++  ++ELR  +EE  +A  R      +  R E ER
Sbjct: 810 RQRAELEELRQQLEESSSALTRALRAEFEKGREEQER 846


>gi|153082722 intercellular adhesion molecule 2 precursor [Homo
           sapiens]
          Length = 275

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 15/36 (41%), Positives = 23/36 (63%)

Query: 217 LLTSLDGHLLEPDAEYLHWLLTNIPGNRVAEGQVTC 252
           L TSLD  LL+  A++ H+L++NI  + V +   TC
Sbjct: 60  LETSLDKILLDEQAQWKHYLVSNISHDTVLQCHFTC 95


>gi|153082719 intercellular adhesion molecule 2 precursor [Homo
           sapiens]
          Length = 275

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 15/36 (41%), Positives = 23/36 (63%)

Query: 217 LLTSLDGHLLEPDAEYLHWLLTNIPGNRVAEGQVTC 252
           L TSLD  LL+  A++ H+L++NI  + V +   TC
Sbjct: 60  LETSLDKILLDEQAQWKHYLVSNISHDTVLQCHFTC 95


>gi|153082699 intercellular adhesion molecule 2 precursor [Homo
           sapiens]
          Length = 275

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 15/36 (41%), Positives = 23/36 (63%)

Query: 217 LLTSLDGHLLEPDAEYLHWLLTNIPGNRVAEGQVTC 252
           L TSLD  LL+  A++ H+L++NI  + V +   TC
Sbjct: 60  LETSLDKILLDEQAQWKHYLVSNISHDTVLQCHFTC 95


>gi|153082686 intercellular adhesion molecule 2 precursor [Homo
           sapiens]
          Length = 275

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 15/36 (41%), Positives = 23/36 (63%)

Query: 217 LLTSLDGHLLEPDAEYLHWLLTNIPGNRVAEGQVTC 252
           L TSLD  LL+  A++ H+L++NI  + V +   TC
Sbjct: 60  LETSLDKILLDEQAQWKHYLVSNISHDTVLQCHFTC 95


>gi|153082696 intercellular adhesion molecule 2 precursor [Homo
           sapiens]
          Length = 275

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 15/36 (41%), Positives = 23/36 (63%)

Query: 217 LLTSLDGHLLEPDAEYLHWLLTNIPGNRVAEGQVTC 252
           L TSLD  LL+  A++ H+L++NI  + V +   TC
Sbjct: 60  LETSLDKILLDEQAQWKHYLVSNISHDTVLQCHFTC 95


>gi|15042961 HLA-B associated transcript 4 [Homo sapiens]
          Length = 356

 Score = 30.8 bits (68), Expect = 2.1
 Identities = 17/64 (26%), Positives = 27/64 (42%)

Query: 5   WWRAALCECRRWRGFSTSAVLGRRTPPLGPMPNSDIDLSNLERLEKYRSFDRYRRRAEQE 64
           WW   +C  R  +G + S +LGR    +G    S  D + L     +    R  R +  E
Sbjct: 143 WWTPLMCAARAGQGAAVSYLLGRGAAWVGVCELSGRDAAQLAEEAGFPEVARMVRESHGE 202

Query: 65  AQAP 68
            ++P
Sbjct: 203 TRSP 206


>gi|16332372 cell division cycle 2-like 1 (PITSLRE proteins) isoform
           9 [Homo sapiens]
          Length = 771

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 8/82 (9%)

Query: 49  EKYRSFDRYRRRAEQEAQAPHWWRTY------REYFGEKTDPKEKIDIGLPPPKVSRTQQ 102
           EK R  +R +R  E++ +A   W         RE+   + D  E+++      +  R QQ
Sbjct: 115 EKEREHERRKRHREEQDKARREWERQKRREMAREHSRRERDRLEQLERKRERERKMREQQ 174

Query: 103 LLERKQAIQELRANVEEERAAR 124
             +R+Q  +E RA  EE R  R
Sbjct: 175 KEQREQKERERRA--EERRKER 194


>gi|16332364 cell division cycle 2-like 1 (PITSLRE proteins) isoform
           5 [Homo sapiens]
          Length = 748

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 8/82 (9%)

Query: 49  EKYRSFDRYRRRAEQEAQAPHWWRTY------REYFGEKTDPKEKIDIGLPPPKVSRTQQ 102
           EK R  +R +R  E++ +A   W         RE+   + D  E+++      +  R QQ
Sbjct: 92  EKEREHERRKRHREEQDKARREWERQKRREMAREHSRRERDRLEQLERKRERERKMREQQ 151

Query: 103 LLERKQAIQELRANVEEERAAR 124
             +R+Q  +E RA  EE R  R
Sbjct: 152 KEQREQKERERRA--EERRKER 171


>gi|16332362 cell division cycle 2-like 1 (PITSLRE proteins) isoform
           4 [Homo sapiens]
          Length = 737

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 8/82 (9%)

Query: 49  EKYRSFDRYRRRAEQEAQAPHWWRTY------REYFGEKTDPKEKIDIGLPPPKVSRTQQ 102
           EK R  +R +R  E++ +A   W         RE+   + D  E+++      +  R QQ
Sbjct: 81  EKEREHERRKRHREEQDKARREWERQKRREMAREHSRRERDRLEQLERKRERERKMREQQ 140

Query: 103 LLERKQAIQELRANVEEERAAR 124
             +R+Q  +E RA  EE R  R
Sbjct: 141 KEQREQKERERRA--EERRKER 160


>gi|16332358 cell division cycle 2-like 1 (PITSLRE proteins) isoform
           2 [Homo sapiens]
          Length = 782

 Score = 30.0 bits (66), Expect = 3.6
 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 8/82 (9%)

Query: 49  EKYRSFDRYRRRAEQEAQAPHWWRTY------REYFGEKTDPKEKIDIGLPPPKVSRTQQ 102
           EK R  +R +R  E++ +A   W         RE+   + D  E+++      +  R QQ
Sbjct: 126 EKEREHERRKRHREEQDKARREWERQKRREMAREHSRRERDRLEQLERKRERERKMREQQ 185

Query: 103 LLERKQAIQELRANVEEERAAR 124
             +R+Q  +E RA  EE R  R
Sbjct: 186 KEQREQKERERRA--EERRKER 205


>gi|5031873 lectin, mannose-binding, 1 precursor [Homo sapiens]
          Length = 510

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 6/49 (12%)

Query: 224 HLLEPDAEYLHWLLTNIPGNRVAEGQVTCPYLPPFPARGSGIHRLAFLL 272
           H+++ D + L  +  N+P N   +    CP LPPFP+  S +H + F++
Sbjct: 444 HIVKRDIDNL--VQRNMPSNEKPK----CPELPPFPSCLSTVHFIIFVV 486


>gi|16332370 cell division cycle 2-like 1 (PITSLRE proteins) isoform
           8 [Homo sapiens]
          Length = 780

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 24/107 (22%), Positives = 46/107 (42%), Gaps = 2/107 (1%)

Query: 49  EKYRSFDRYRR-RAEQEAQAPHWWRTYREYFGEKTDPKEKIDIGLPPPKVSRTQQLLERK 107
           EK R  +R +R R EQ+     W R  R     +   +E+ + G+   +  R +QL  ++
Sbjct: 115 EKEREHERRKRHREEQDKARREWERQKRREMAREHSRRERGNDGVCLFR-DRLEQLERKR 173

Query: 108 QAIQELRANVEEERAARLRTASVPLDAVRAEWERTCGPYHKQRLAEY 154
           +  +++R   +E+R  + R           E  R    +H+    +Y
Sbjct: 174 ERERKMREQQKEQREQKERERRAEERRKEREARREVSAHHRTMREDY 220


>gi|148886692 FAT tumor suppressor homolog 3 [Homo sapiens]
          Length = 4557

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 19/47 (40%), Positives = 24/47 (51%), Gaps = 5/47 (10%)

Query: 184  LMPVYCGNEV-----TPTEAAQAPEVTYEAEEGSLWTLLLTSLDGHL 225
            L+P Y G EV     T  ++   PE+TY   EGSL   L+ S  G L
Sbjct: 1893 LLPTYVGVEVLKVSATDPDSEVPPELTYSLMEGSLDHFLIDSNSGVL 1939


>gi|31542634 filamin A interacting protein 1 [Homo sapiens]
          Length = 1213

 Score = 29.6 bits (65), Expect = 4.7
 Identities = 32/97 (32%), Positives = 46/97 (47%), Gaps = 7/97 (7%)

Query: 42  LSNLERLEKYRSFDRYRRRAEQEAQAPHWWR-TYREYFGEK---TDPKEKID--IGLPPP 95
           +S L+RLE+ +  + YRR  EQ   A    R T  E   EK   TD   K D    L   
Sbjct: 148 ISELDRLEEKQK-ETYRRMLEQLLLAEKCHRRTVYELENEKHKHTDYMNKSDDFTNLLEQ 206

Query: 96  KVSRTQQLLERKQAIQELRANVEEERAARLRTASVPL 132
           +  R ++LLE+++A Q  +     +R  +LR   V L
Sbjct: 207 ERERLKKLLEQEKAYQARKEKENAKRLNKLRDELVKL 243


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.138    0.449 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 17,387,122
Number of Sequences: 37866
Number of extensions: 855160
Number of successful extensions: 2205
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 28
Number of HSP's that attempted gapping in prelim test: 2164
Number of HSP's gapped (non-prelim): 62
length of query: 380
length of database: 18,247,518
effective HSP length: 104
effective length of query: 276
effective length of database: 14,309,454
effective search space: 3949409304
effective search space used: 3949409304
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 63 (28.9 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.