Guide to the Human Genome
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Name: CRYBA2 Sequence: fasta or formatted (197aa) NCBI GI: 16936542
Description:

crystallin, beta A2

Referenced in:

Crystallins and Other Eye Proteins

Other entries for this name:
alt mRNA [197aa] crystallin, beta A2
alt mRNA [197aa] crystallin, beta A2
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.1         12           1
 C cysteine            3.0          6           1
 D aspartate           6.1         12           2
 E glutamate           5.1         10           2
 F phenylalanine       4.6          9           1
 G glycine             9.6         19           2
 H histidine           2.5          5           1
 I isoleucine          1.0          2           1
 K lysine              2.5          5           1
 L leucine             8.1         16           2
 M methionine          1.0          2           1
 N asparagine          3.6          7           1
 P proline             5.6         11           1
 Q glutamine           6.1         12           2
 R arginine            7.1         14           2
 S serine             10.7         21           3
 T threonine           2.5          5           1
 V valine              7.1         14           1
 W tryptophan          3.0          6           1
 Y tyrosine            4.6          9           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   crystallin, beta A2 
CRYBA2                1.000   crystallin, beta A2 
CRYBA2                1.000   crystallin, beta A2 
CRYBA1                0.530   crystallin, beta A3 
CRYBA4                0.495   crystallin, beta A4 
CRYBB1                0.356   crystallin, beta B1 
CRYBB3                0.301   crystallin, beta B3 
CRYBB2                0.275   crystallin, beta B2 
CRYGN                 0.212   gammaN-crystallin 
CRYGS                 0.197   crystallin, gamma S 
CRYGA                 0.197   crystallin, gamma A 
CRYGC                 0.187   crystallin, gamma C 
CRYGB                 0.174   crystallin, gamma B 
AIM1                  0.164   absent in melanoma 1 
CRYBG3                0.162   beta-gamma crystallin domain containing 3 
CRYGD                 0.162   crystallin, gamma D 
AIM1L                 0.159   absent in melanoma 1-like 
C3orf44               0.013   hypothetical protein LOC131831 
NOTCH3                0.010   Notch homolog 3 
SSPO                  0.008   SCO-spondin 
DLG4                  0.005   post-synaptic density protein 95 isoform 1 
DLG4                  0.005   post-synaptic density protein 95 isoform 2 
DLG2                  0.005   chapsyn-110 isoform 3 
DLG2                  0.005   chapsyn-110 isoform 4 
C15orf39              0.005   hypothetical protein LOC56905 
CHD9                  0.005   chromodomain helicase DNA binding protein 9 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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