Guide to the Human Genome
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Name: CRYGN Sequence: fasta or formatted (182aa) NCBI GI: 21389517
Description:

gammaN-crystallin

Referenced in:

Crystallins and Other Eye Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             4.4          8           2
 C cysteine            3.3          6           1
 D aspartate           6.0         11           1
 E glutamate           6.6         12           2
 F phenylalanine       9.3         17           2
 G glycine             9.9         18           1
 H histidine           4.4          8           1
 I isoleucine          2.7          5           1
 K lysine              3.3          6           1
 L leucine             6.0         11           1
 M methionine          2.2          4           1
 N asparagine          4.9          9           1
 P proline             4.9          9           2
 Q glutamine           6.0         11           2
 R arginine            4.9          9           1
 S serine              7.7         14           3
 T threonine           4.9          9           2
 V valine              4.4          8           1
 W tryptophan          2.2          4           1
 Y tyrosine            1.6          3           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   gammaN-crystallin 
CRYBA2                0.227   crystallin, beta A2 
CRYBA2                0.227   crystallin, beta A2 
CRYBA2                0.227   crystallin, beta A2 
CRYBA1                0.211   crystallin, beta A3 
CRYBB1                0.200   crystallin, beta B1 
CRYGS                 0.195   crystallin, gamma S 
CRYGC                 0.189   crystallin, gamma C 
CRYGB                 0.184   crystallin, gamma B 
CRYGD                 0.181   crystallin, gamma D 
CRYBB3                0.178   crystallin, beta B3 
CRYBA4                0.162   crystallin, beta A4 
CRYGA                 0.157   crystallin, gamma A 
CRYBB2                0.151   crystallin, beta B2 
CRYBG3                0.127   beta-gamma crystallin domain containing 3 
AIM1                  0.114   absent in melanoma 1 
AIM1L                 0.095   absent in melanoma 1-like 
C13orf26              0.008   hypothetical protein LOC122046 
TTC16                 0.008   tetratricopeptide repeat domain 16 
KIAA1109              0.005   fragile site-associated protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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