Guide to the Human Genome
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Name: CRYGA Sequence: fasta or formatted (174aa) NCBI GI: 148491057
Description:

crystallin, gamma A

Referenced in:

Crystallins and Other Eye Proteins

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             1.7          3           1
 C cysteine            5.2          9           1
 D aspartate           8.0         14           2
 E glutamate           4.6          8           1
 F phenylalanine       2.9          5           1
 G glycine             7.5         13           2
 H histidine           3.4          6           1
 I isoleucine          3.4          6           2
 K lysine              2.3          4           1
 L leucine             9.8         17           2
 M methionine          2.9          5           1
 N asparagine          2.9          5           1
 P proline             4.6          8           1
 Q glutamine           3.4          6           1
 R arginine           11.5         20           2
 S serine              6.9         12           2
 T threonine           2.3          4           1
 V valine              4.6          8           1
 W tryptophan          2.3          4           1
 Y tyrosine            9.8         17           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   crystallin, gamma A 
CRYGB                 0.739   crystallin, gamma B 
CRYGC                 0.736   crystallin, gamma C 
CRYGD                 0.703   crystallin, gamma D 
CRYGS                 0.494   crystallin, gamma S 
CRYBB3                0.242   crystallin, beta B3 
CRYBB2                0.236   crystallin, beta B2 
AIM1L                 0.236   absent in melanoma 1-like 
CRYBB1                0.231   crystallin, beta B1 
CRYBA1                0.222   crystallin, beta A3 
CRYBA2                0.217   crystallin, beta A2 
CRYBA2                0.217   crystallin, beta A2 
CRYBA2                0.217   crystallin, beta A2 
CRYBA4                0.214   crystallin, beta A4 
AIM1                  0.200   absent in melanoma 1 
CRYGN                 0.161   gammaN-crystallin 
CRYBG3                0.158   beta-gamma crystallin domain containing 3 
FARP1                 0.011   FERM, RhoGEF, and pleckstrin domain protein 1 isoform...
SARDH                 0.006   sarcosine dehydrogenase precursor 
SARDH                 0.006   sarcosine dehydrogenase precursor 
PCDH12                0.006   protocadherin 12 precursor 
LOC100293983          0.006   PREDICTED: similar to mucin, partial 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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