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Search of human proteins with 16933567
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|16933567 mel transforming oncogene [Homo sapiens]
(207 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|16933567 mel transforming oncogene [Homo sapiens] 414 e-116
gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens] 352 1e-97
gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens] 275 2e-74
gi|4506363 RAB13, member RAS oncogene family [Homo sapiens] 266 1e-71
gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene fa... 262 2e-70
gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens] 262 2e-70
gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens] 262 2e-70
gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo sap... 229 1e-60
gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens] 219 1e-57
gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens] 209 1e-54
gi|4759000 RAB3D, member RAS oncogene family [Homo sapiens] 208 3e-54
gi|19923985 RAB3C, member RAS oncogene family [Homo sapiens] 207 7e-54
gi|46361978 RAB26, member RAS oncogene family [Homo sapiens] 202 2e-52
gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo sa... 200 6e-52
gi|19923750 RAB3B, member RAS oncogene family [Homo sapiens] 198 3e-51
gi|5803135 RAB35, member RAS oncogene family [Homo sapiens] 194 3e-50
gi|21361884 RAB2B protein isoform 1 [Homo sapiens] 191 4e-49
gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens] 186 2e-47
gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo sa... 184 4e-47
gi|106507164 RAB12, member RAS oncogene family [Homo sapiens] 181 5e-46
gi|239915976 RAB19, member RAS oncogene family [Homo sapiens] 179 1e-45
gi|4758984 Ras-related protein Rab-11A [Homo sapiens] 177 6e-45
gi|50234889 RAB43 protein [Homo sapiens] 176 2e-44
gi|25188193 RAB39B, member RAS oncogene family [Homo sapiens] 174 5e-44
gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens] 173 8e-44
gi|21361418 RAB30, member RAS oncogene family [Homo sapiens] 172 1e-43
gi|34485711 Ras-related protein Rab-27A [Homo sapiens] 168 3e-42
gi|34485709 Ras-related protein Rab-27A [Homo sapiens] 168 3e-42
gi|34485706 Ras-related protein Rab-27A [Homo sapiens] 168 3e-42
gi|19923264 Ras-related protein Rab-27A [Homo sapiens] 168 3e-42
>gi|16933567 mel transforming oncogene [Homo sapiens]
Length = 207
Score = 414 bits (1064), Expect = e-116
Identities = 207/207 (100%), Positives = 207/207 (100%)
Query: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQ 60
MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQ
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQ 60
Query: 61 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG 120
IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG
Sbjct: 61 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG 120
Query: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGN 180
NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGN
Sbjct: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGN 180
Query: 181 SPQGSNQGVKITPDQQKRSSFFRCVLL 207
SPQGSNQGVKITPDQQKRSSFFRCVLL
Sbjct: 181 SPQGSNQGVKITPDQQKRSSFFRCVLL 207
>gi|7706563 RAB8B, member RAS oncogene family [Homo sapiens]
Length = 207
Score = 352 bits (904), Expect = 1e-97
Identities = 171/207 (82%), Positives = 193/207 (93%)
Query: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQ 60
MAKTYDYLFKLLLIGDSGVGKTC+LFRFSEDAFN+TFISTIGIDFKIRTIELDGK+IKLQ
Sbjct: 1 MAKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQ 60
Query: 61 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG 120
IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNI+NWIRNIEEHAS+DVE+MILG
Sbjct: 61 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILG 120
Query: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGN 180
NKCD+NDKRQVSKERGEKLA+DYGIKF+ETSAK++ NVE AFFTLARDI K+++K+ +
Sbjct: 121 NKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKLNRKMNDS 180
Query: 181 SPQGSNQGVKITPDQQKRSSFFRCVLL 207
+ G+ VKIT ++ K++SFFRC LL
Sbjct: 181 NSAGAGGPVKITENRSKKTSFFRCSLL 207
>gi|33695095 ras-related GTP-binding protein RAB10 [Homo sapiens]
Length = 200
Score = 275 bits (703), Expect = 2e-74
Identities = 135/179 (75%), Positives = 156/179 (87%), Gaps = 1/179 (0%)
Query: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
KTYD LFKLLLIGDSGVGKTCVLFRFS+DAFN+TFISTIGIDFKI+T+EL GK+IKLQIW
Sbjct: 4 KTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIW 63
Query: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
DTAGQERF TITT+YYRGAMGIMLVYDITN KSF+NI W+RNI+EHA+ DVE+M+LGNK
Sbjct: 64 DTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISKWLRNIDEHANEDVERMLLGNK 123
Query: 123 CDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNS 181
CD++DKR V K +G ++A ++GI+F ETSAKANIN+E AF TLA DI K K E NS
Sbjct: 124 CDMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVK-EPNS 181
>gi|4506363 RAB13, member RAS oncogene family [Homo sapiens]
Length = 203
Score = 266 bits (679), Expect = 1e-71
Identities = 124/190 (65%), Positives = 165/190 (86%)
Query: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQ 60
MAK YD+LFKLLLIGDSGVGKTC++ RF+ED FN+T+ISTIGIDFKIRT++++GK+IKLQ
Sbjct: 1 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 60
Query: 61 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG 120
+WDTAGQERF+TITTAYYRGAMGI+LVYDIT+EKSF+NI+NW+++I+E+ASA VE+++LG
Sbjct: 61 VWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVERLLLG 120
Query: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGN 180
NKCD+ KR+V KE+ +KLA ++GI+F ETSAK+++NV+ AF +LARDI K + GN
Sbjct: 121 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGN 180
Query: 181 SPQGSNQGVK 190
+ + +K
Sbjct: 181 GNKPPSTDLK 190
>gi|169204777 PREDICTED: similar to RAB13, member RAS oncogene
family [Homo sapiens]
Length = 327
Score = 262 bits (669), Expect = 2e-70
Identities = 123/190 (64%), Positives = 162/190 (85%)
Query: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQ 60
MAK YD+LFKLLLIGDSGVGKTC++ RF+ED FN+T+ISTIGIDFKIRT++++GK+IKLQ
Sbjct: 125 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 184
Query: 61 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG 120
+WDTAGQERF+TITTAYYRGAMGI+L YDIT+EKSF+NI+NW+++I E+ASA VE ++LG
Sbjct: 185 VWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLG 244
Query: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGN 180
NKCD+ KR+V KE+ +KLA ++GI+F ETSAK+++NV+ AF +LARDI K + GN
Sbjct: 245 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGN 304
Query: 181 SPQGSNQGVK 190
+ + +K
Sbjct: 305 GNKPPSTDLK 314
>gi|169205558 PREDICTED: similar to hCG24991 [Homo sapiens]
Length = 327
Score = 262 bits (669), Expect = 2e-70
Identities = 123/190 (64%), Positives = 162/190 (85%)
Query: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQ 60
MAK YD+LFKLLLIGDSGVGKTC++ RF+ED FN+T+ISTIGIDFKIRT++++GK+IKLQ
Sbjct: 125 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 184
Query: 61 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG 120
+WDTAGQERF+TITTAYYRGAMGI+L YDIT+EKSF+NI+NW+++I E+ASA VE ++LG
Sbjct: 185 VWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLG 244
Query: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGN 180
NKCD+ KR+V KE+ +KLA ++GI+F ETSAK+++NV+ AF +LARDI K + GN
Sbjct: 245 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGN 304
Query: 181 SPQGSNQGVK 190
+ + +K
Sbjct: 305 GNKPPSTDLK 314
>gi|169204174 PREDICTED: similar to hCG24991 [Homo sapiens]
Length = 327
Score = 262 bits (669), Expect = 2e-70
Identities = 123/190 (64%), Positives = 162/190 (85%)
Query: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQ 60
MAK YD+LFKLLLIGDSGVGKTC++ RF+ED FN+T+ISTIGIDFKIRT++++GK+IKLQ
Sbjct: 125 MAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQ 184
Query: 61 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG 120
+WDTAGQERF+TITTAYYRGAMGI+L YDIT+EKSF+NI+NW+++I E+ASA VE ++LG
Sbjct: 185 VWDTAGQERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEHLLLG 244
Query: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGN 180
NKCD+ KR+V KE+ +KLA ++GI+F ETSAK+++NV+ AF +LARDI K + GN
Sbjct: 245 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRSGN 304
Query: 181 SPQGSNQGVK 190
+ + +K
Sbjct: 305 GNKPPSTDLK 314
>gi|4758988 RAB1A, member RAS oncogene family isoform 1 [Homo
sapiens]
Length = 205
Score = 229 bits (585), Expect = 1e-60
Identities = 108/196 (55%), Positives = 148/196 (75%)
Query: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQ 60
M YDYLFKLLLIGDSGVGK+C+L RF++D + ++ISTIG+DFKIRTIELDGK IKLQ
Sbjct: 4 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 63
Query: 61 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG 120
IWDTAGQERFRTIT++YYRGA GI++VYD+T+++SF+N++ W++ I+ +AS +V K+++G
Sbjct: 64 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVG 123
Query: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGN 180
NKCD+ K+ V ++ A GI F+ETSAK NVE +F T+A +IK +M
Sbjct: 124 NKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAG 183
Query: 181 SPQGSNQGVKITPDQQ 196
+ SN ++ TP +Q
Sbjct: 184 GAEKSNVKIQSTPVKQ 199
>gi|13569962 RAB1B, member RAS oncogene family [Homo sapiens]
Length = 201
Score = 219 bits (559), Expect = 1e-57
Identities = 106/191 (55%), Positives = 143/191 (74%), Gaps = 3/191 (1%)
Query: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQ 60
M YDYLFKLLLIGDSGVGK+C+L RF++D + ++ISTIG+DFKIRTIELDGK IKLQ
Sbjct: 1 MNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 60
Query: 61 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG 120
IWDTAGQERFRTIT++YYRGA GI++VYD+T+++S+ N++ W++ I+ +AS +V K+++G
Sbjct: 61 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNKLLVG 120
Query: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGN 180
NK D+ K+ V ++ A GI F+ETSAK NVE AF T+A +IK +M G
Sbjct: 121 NKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMG---PGA 177
Query: 181 SPQGSNQGVKI 191
+ G +KI
Sbjct: 178 ASGGERPNLKI 188
>gi|4506367 RAB3A, member RAS oncogene family [Homo sapiens]
Length = 220
Score = 209 bits (533), Expect = 1e-54
Identities = 101/195 (51%), Positives = 143/195 (73%), Gaps = 2/195 (1%)
Query: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
+ +DY+FK+L+IG+S VGKT LFR+++D+F F+ST+GIDFK++TI + KRIKLQIW
Sbjct: 17 QNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKLQIW 76
Query: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
DTAGQER+RTITTAYYRGAMG +L+YDITNE+SF+ +++W I+ ++ + + +++GNK
Sbjct: 77 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVLLVGNK 136
Query: 123 CDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSP 182
CD+ D+R VS ERG +LA G +F E SAK NINV+ F L I KM + L+ P
Sbjct: 137 CDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESLDTADP 196
Query: 183 --QGSNQGVKITPDQ 195
G+ QG +++ Q
Sbjct: 197 AVTGAKQGPQLSDQQ 211
>gi|4759000 RAB3D, member RAS oncogene family [Homo sapiens]
Length = 219
Score = 208 bits (529), Expect = 3e-54
Identities = 99/184 (53%), Positives = 136/184 (73%)
Query: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
+ +DY+FKLLLIG+S VGKT LFR+++D+F F+ST+GIDFK++T+ KRIKLQIW
Sbjct: 17 QNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKLQIW 76
Query: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
DTAGQER+RTITTAYYRGAMG +L+YDI N++SF +++W I+ ++ + + +++GNK
Sbjct: 77 DTAGQERYRTITTAYYRGAMGFLLMYDIANQESFAAVQDWATQIKTYSWDNAQVILVGNK 136
Query: 123 CDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSP 182
CD+ D+R V E G +LA D G +F E SAK NINV+ F L I KM++ LE +S
Sbjct: 137 CDLEDERVVPAEDGRRLADDLGFEFFEASAKENINVKQVFERLVDVICEKMNESLEPSSS 196
Query: 183 QGSN 186
GSN
Sbjct: 197 SGSN 200
>gi|19923985 RAB3C, member RAS oncogene family [Homo sapiens]
Length = 227
Score = 207 bits (526), Expect = 7e-54
Identities = 97/176 (55%), Positives = 135/176 (76%)
Query: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
+ +DY+FKLL+IG+S VGKT LFR+++D+F S F+ST+GIDFK++T+ + KRIKLQIW
Sbjct: 25 QNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKLQIW 84
Query: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
DTAGQER+RTITTAYYRGAMG +L+YDITNE+SF+ +++W I+ ++ + + +++GNK
Sbjct: 85 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWSTQIKTYSWDNAQVILVGNK 144
Query: 123 CDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLE 178
CD+ D+R +S ERG+ L G +F ETSAK NINV+ F L I KM + LE
Sbjct: 145 CDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESLE 200
>gi|46361978 RAB26, member RAS oncogene family [Homo sapiens]
Length = 256
Score = 202 bits (513), Expect = 2e-52
Identities = 95/172 (55%), Positives = 132/172 (76%), Gaps = 1/172 (0%)
Query: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNS-TFISTIGIDFKIRTIELDGKRIKLQIWD 63
YD FK++L+GDSGVGKTC+L RF + AF + TFIST+GIDF+ + +++DG ++KLQ+WD
Sbjct: 60 YDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGVKVKLQMWD 119
Query: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKC 123
TAGQERFR++T AYYR A ++L+YD+TN+ SFDNI+ W+ I E+A DV M+LGNK
Sbjct: 120 TAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQAWLTEIHEYAQHDVALMLLGNKV 179
Query: 124 DVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDK 175
D +R V +E GEKLA +YG+ FMETSAK +NV+ AF +A+++K + K
Sbjct: 180 DSAHERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKELKQRSMK 231
>gi|54859685 RAB37, member RAS oncogene family isoform 2 [Homo
sapiens]
Length = 223
Score = 200 bits (509), Expect = 6e-52
Identities = 100/198 (50%), Positives = 140/198 (70%), Gaps = 5/198 (2%)
Query: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNS-TFISTIGIDFKIRTIELDGKRIKLQIW 62
+YD K++L+GD+GVGKTC L +F + AF S TFI+T+GIDF+ + + +DG R+KLQIW
Sbjct: 25 SYDLTGKVMLLGDTGVGKTCFLIQFKDGAFLSGTFIATVGIDFRNKVVTVDGVRVKLQIW 84
Query: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
DTAGQERFR++T AYYR A ++L+YDITN+ SFDNIR W+ I E+A DV M+LGNK
Sbjct: 85 DTAGQERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNK 144
Query: 123 CDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSP 182
D++ +R + E GE LA +YG+ F+ETSAK +NVE AF +A+++K + + +
Sbjct: 145 ADMSSERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAGHQAD---- 200
Query: 183 QGSNQGVKITPDQQKRSS 200
+ S Q Q+KRSS
Sbjct: 201 EPSFQIRDYVESQKKRSS 218
>gi|19923750 RAB3B, member RAS oncogene family [Homo sapiens]
Length = 219
Score = 198 bits (503), Expect = 3e-51
Identities = 95/191 (49%), Positives = 138/191 (72%), Gaps = 1/191 (0%)
Query: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
+ +DY+FKLL+IG+S VGKT LFR+++D F F+ST+GIDFK++T+ KR+KLQIW
Sbjct: 17 QNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRHEKRVKLQIW 76
Query: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
DTAGQER+RTITTAYYRGAMG +L+YDITNE+SF+ +++W I+ ++ + + +++GNK
Sbjct: 77 DTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQDWATQIKTYSWDNAQVILVGNK 136
Query: 123 CDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGN-S 181
CD+ ++R V E+G+ LA G F E SAK NI+V AF L I KM L+ + S
Sbjct: 137 CDMEEERVVPTEKGQLLAEQLGFDFFEASAKENISVRQAFERLVDAICDKMSDSLDTDPS 196
Query: 182 PQGSNQGVKIT 192
GS++ +++
Sbjct: 197 MLGSSKNTRLS 207
>gi|5803135 RAB35, member RAS oncogene family [Homo sapiens]
Length = 201
Score = 194 bits (494), Expect = 3e-50
Identities = 92/198 (46%), Positives = 139/198 (70%), Gaps = 1/198 (0%)
Query: 1 MAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQ 60
MA+ YD+LFKLL+IGDSGVGK+ +L RF+++ F+ ++I+TIG+DFKIRT+E++G+++KLQ
Sbjct: 1 MARDYDHLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQ 60
Query: 61 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILG 120
IWDTAGQERFRTIT+ YYRG G+++VYD+T+ +SF N++ W+ I ++ DV ++++G
Sbjct: 61 IWDTAGQERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD-DVCRILVG 119
Query: 121 NKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGN 180
NK D +++ V E K A GI+ ETSAK N+NVE F + + L
Sbjct: 120 NKNDDPERKVVETEDAYKFAGQMGIQLFETSAKENVNVEEMFNCITELVLRAKKDNLAKQ 179
Query: 181 SPQGSNQGVKITPDQQKR 198
Q N VK+T + +++
Sbjct: 180 QQQQQNDVVKLTKNSKRK 197
>gi|21361884 RAB2B protein isoform 1 [Homo sapiens]
Length = 216
Score = 191 bits (485), Expect = 4e-49
Identities = 91/197 (46%), Positives = 134/197 (68%), Gaps = 2/197 (1%)
Query: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWD 63
TY YLFK ++IGD+GVGK+C+L +F++ F TIG++F R + +DGK+IKLQIWD
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWD 61
Query: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKC 123
TAGQE FR+IT +YYRGA G +LVYDIT ++F+++ +W+ + +H+S+++ M++GNK
Sbjct: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKS 121
Query: 124 DVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQ 183
D+ +R V +E GE A ++G+ FMETSAK NVE AF A++I K+ + L
Sbjct: 122 DLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGL--FDVH 179
Query: 184 GSNQGVKITPDQQKRSS 200
G+KI P Q +S
Sbjct: 180 NEANGIKIGPQQSISTS 196
>gi|4506365 RAB2A, member RAS oncogene family [Homo sapiens]
Length = 212
Score = 186 bits (471), Expect = 2e-47
Identities = 88/189 (46%), Positives = 132/189 (69%), Gaps = 2/189 (1%)
Query: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Y YLFK ++IGD+GVGK+C+L +F++ F TIG++F R I +DGK+IKLQIWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
AGQE FR+IT +YYRGA G +LVYDIT +F+++ W+ + +H+++++ M++GNK D
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSD 122
Query: 125 VNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQG 184
+ +R+V KE GE A ++G+ FMETSAK NVE AF A++I K+ + + + +
Sbjct: 123 LESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEA 182
Query: 185 SNQGVKITP 193
+ G+KI P
Sbjct: 183 N--GIKIGP 189
>gi|28376635 RAB37, member RAS oncogene family isoform 3 [Homo
sapiens]
Length = 216
Score = 184 bits (468), Expect = 4e-47
Identities = 94/194 (48%), Positives = 132/194 (68%), Gaps = 5/194 (2%)
Query: 8 LFKLLLIGDSGVGKTCVLFRFSEDAF-NSTFISTIGIDFKIRTIELDGKRIKLQIWDTAG 66
L K +L+GDSGVGKT +L +F + F +F +T+GI F + + +DG R+KLQIWDTAG
Sbjct: 22 LHKTILVGDSGVGKTSLLVQFDQGKFIPGSFSATVGIGFTNKVVTVDGVRVKLQIWDTAG 81
Query: 67 QERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDVN 126
QERFR++T AYYR A ++L+YDITN+ SFDNIR W+ I E+A DV M+LGNK D++
Sbjct: 82 QERFRSVTHAYYRDAQALLLLYDITNKSSFDNIRAWLTEIHEYAQRDVVIMLLGNKADMS 141
Query: 127 DKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQGSN 186
+R + E GE LA +YG+ F+ETSAK +NVE AF +A+++K + + + + S
Sbjct: 142 SERVIRSEDGETLAREYGVPFLETSAKTGMNVELAFLAIAKELKYRAGHQAD----EPSF 197
Query: 187 QGVKITPDQQKRSS 200
Q Q+KRSS
Sbjct: 198 QIRDYVESQKKRSS 211
>gi|106507164 RAB12, member RAS oncogene family [Homo sapiens]
Length = 244
Score = 181 bits (458), Expect = 5e-46
Identities = 87/190 (45%), Positives = 131/190 (68%), Gaps = 1/190 (0%)
Query: 6 DYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTA 65
D+ ++++IG GVGKT ++ RF++D F ST+G+DFKI+T+EL GK+I+LQIWDTA
Sbjct: 40 DFKLQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTA 99
Query: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCDV 125
GQERF +IT+AYYR A GI+LVYDIT +++FD++ W++ I+++AS D E +++GNK D
Sbjct: 100 GQERFNSITSAYYRSAKGIILVYDITKKETFDDLPKWMKMIDKYASEDAELLLVGNKLDC 159
Query: 126 NDKRQVSKERGEKLALDY-GIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNSPQG 184
R++++++GEK A G++F E SAK N NV+ F L DI KM + N
Sbjct: 160 ETDREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDILRNELSN 219
Query: 185 SNQGVKITPD 194
S ++ P+
Sbjct: 220 SILSLQPEPE 229
>gi|239915976 RAB19, member RAS oncogene family [Homo sapiens]
Length = 217
Score = 179 bits (454), Expect = 1e-45
Identities = 84/180 (46%), Positives = 126/180 (70%), Gaps = 1/180 (0%)
Query: 3 KTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIW 62
+ +DYLFK++LIGDS VGKTCV+ F + T +TIG+DF +R++++DGK++K+Q+W
Sbjct: 12 ENFDYLFKIILIGDSNVGKTCVVQHFKSGVYTETQQNTIGVDFTVRSLDIDGKKVKMQVW 71
Query: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNK 122
DTAGQERFRTIT +YYR A ++ YD+T +F++I +WI IE++ +A+V M++GNK
Sbjct: 72 DTAGQERFRTITQSYYRSAHAAIIAYDLTRRSTFESIPHWIHEIEKYGAANVVIMLIGNK 131
Query: 123 CDVNDKRQVSKERGEKLALDYG-IKFMETSAKANINVENAFFTLARDIKAKMDKKLEGNS 181
CD+ +KR V E LA YG + +ETSAK + N+E F +A+++ A+ L G S
Sbjct: 132 CDLWEKRHVLFEDACTLAEKYGLLAVLETSAKESKNIEEVFVLMAKELIARNSLHLYGES 191
>gi|4758984 Ras-related protein Rab-11A [Homo sapiens]
Length = 216
Score = 177 bits (449), Expect = 6e-45
Identities = 88/206 (42%), Positives = 130/206 (63%), Gaps = 6/206 (2%)
Query: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
YDYLFK++LIGDSGVGK+ +L RF+ + FN STIG++F R+I++DGK IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
AGQER+R IT+AYYRGA+G +LVYDI +++N+ W++ + +HA +++ M++GNK D
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 127
Query: 125 VNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDI------KAKMDKKLE 178
+ R V + A G+ F+ETSA + NVE AF T+ +I K D++
Sbjct: 128 LRHLRAVPTDEARAFAEKNGLSFIETSALDSTNVEAAFQTILTEIYRIVSQKQMSDRREN 187
Query: 179 GNSPQGSNQGVKITPDQQKRSSFFRC 204
SP + + + P + + C
Sbjct: 188 DMSPSNNVVPIHVPPTTENKPKVQCC 213
>gi|50234889 RAB43 protein [Homo sapiens]
Length = 212
Score = 176 bits (445), Expect = 2e-44
Identities = 84/166 (50%), Positives = 122/166 (73%), Gaps = 1/166 (0%)
Query: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
YD+LFKL+L+GD+ VGKTCV+ RF AF+ STIG+DF ++T+E+ GKR+KLQIWDT
Sbjct: 15 YDFLFKLVLVGDASVGKTCVVQRFKTGAFSERQGSTIGVDFTMKTLEIQGKRVKLQIWDT 74
Query: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
AGQERFRTIT +YYR A G +L YDIT SF ++ +WI ++ ++A +++ ++++GNK D
Sbjct: 75 AGQERFRTITQSYYRSANGAILAYDITKRSSFLSVPHWIEDVRKYAGSNIVQLLIGNKSD 134
Query: 125 VNDKRQVSKERGEKLALDYGIK-FMETSAKANINVENAFFTLARDI 169
+++ R+VS + LA Y I +ETSAK + NVE AF +A ++
Sbjct: 135 LSELREVSLAEAQSLAEHYDILCAIETSAKDSSNVEEAFLRVATEL 180
>gi|25188193 RAB39B, member RAS oncogene family [Homo sapiens]
Length = 213
Score = 174 bits (441), Expect = 5e-44
Identities = 84/165 (50%), Positives = 120/165 (72%), Gaps = 2/165 (1%)
Query: 7 YLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELD-GKRIKLQIWDTA 65
Y F+L++IGDS VGK+C++ RF+E F T+G+DF R +E++ GKRIKLQIWDTA
Sbjct: 7 YQFRLIVIGDSTVGKSCLIRRFTEGRFAQVSDPTVGVDFFSRLVEIEPGKRIKLQIWDTA 66
Query: 66 GQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASA-DVEKMILGNKCD 124
GQERFR+IT AYYR ++G +L++DITN +SF N+ W+ + H + +++G+KCD
Sbjct: 67 GQERFRSITRAYYRNSVGGLLLFDITNRRSFQNVHEWLEETKVHVQPYQIVFVLVGHKCD 126
Query: 125 VNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDI 169
++ +RQV++ EKLA YG+K++ETSA+ INVE AF L RDI
Sbjct: 127 LDTQRQVTRHEAEKLAAAYGMKYIETSARDAINVEKAFTDLTRDI 171
>gi|190358517 RAB11B, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 173 bits (439), Expect = 8e-44
Identities = 89/208 (42%), Positives = 129/208 (62%), Gaps = 8/208 (3%)
Query: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
YDYLFK++LIGDSGVGK+ +L RF+ + FN STIG++F R+I++DGK IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
AGQER+R IT+AYYRGA+G +LVYDI +++N+ W++ + +HA +++ M++GNK D
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 127
Query: 125 VNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDI------KAKMDKKLE 178
+ R V + A + F+ETSA + NVE AF + +I K D+
Sbjct: 128 LRHLRAVPTDEARAFAEKNNLSFIETSALDSTNVEEAFKNILTEIYRIVSQKQIADRAAH 187
Query: 179 GNSPQGSNQGVKITP--DQQKRSSFFRC 204
SP + + + P D QK + C
Sbjct: 188 DESPGNNVVDISVPPTTDGQKPNKLQCC 215
>gi|21361418 RAB30, member RAS oncogene family [Homo sapiens]
Length = 203
Score = 172 bits (437), Expect = 1e-43
Identities = 81/162 (50%), Positives = 123/162 (75%)
Query: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
YD+LFK++LIG++GVGKTC++ RF++ F +TIG+DF I+T+E++G+++KLQIWDT
Sbjct: 6 YDFLFKIVLIGNAGVGKTCLVRRFTQGLFPPGQGATIGVDFMIKTVEINGEKVKLQIWDT 65
Query: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEKMILGNKCD 124
AGQERFR+IT +YYR A ++L YDIT E+SF + W+R IE++AS V +++GNK D
Sbjct: 66 AGQERFRSITQSYYRSANALILTYDITCEESFRCLPEWLREIEQYASNKVITVLVGNKID 125
Query: 125 VNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLA 166
+ ++R+VS++R E+ + + ++ETSAK + NVE F LA
Sbjct: 126 LAERREVSQQRAEEFSEAQDMYYLETSAKESDNVEKLFLDLA 167
>gi|34485711 Ras-related protein Rab-27A [Homo sapiens]
Length = 221
Score = 168 bits (425), Expect = 3e-42
Identities = 85/182 (46%), Positives = 121/182 (66%), Gaps = 11/182 (6%)
Query: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELD----------G 54
YDYL K L +GDSGVGKT VL+++++ FNS FI+T+GIDF+ + + G
Sbjct: 6 YDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDGATGRG 65
Query: 55 KRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADV 114
+RI LQ+WDTAGQERFR++TTA++R AMG +L++D+TNE+SF N+RNWI ++ HA +
Sbjct: 66 QRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCEN 125
Query: 115 EKMIL-GNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKM 173
++L GNK D+ D+R V +E LA YGI + ETSA N+ A L I +M
Sbjct: 126 PDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDLIMKRM 185
Query: 174 DK 175
++
Sbjct: 186 ER 187
>gi|34485709 Ras-related protein Rab-27A [Homo sapiens]
Length = 221
Score = 168 bits (425), Expect = 3e-42
Identities = 85/182 (46%), Positives = 121/182 (66%), Gaps = 11/182 (6%)
Query: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELD----------G 54
YDYL K L +GDSGVGKT VL+++++ FNS FI+T+GIDF+ + + G
Sbjct: 6 YDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDGATGRG 65
Query: 55 KRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADV 114
+RI LQ+WDTAGQERFR++TTA++R AMG +L++D+TNE+SF N+RNWI ++ HA +
Sbjct: 66 QRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCEN 125
Query: 115 EKMIL-GNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKM 173
++L GNK D+ D+R V +E LA YGI + ETSA N+ A L I +M
Sbjct: 126 PDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDLIMKRM 185
Query: 174 DK 175
++
Sbjct: 186 ER 187
>gi|34485706 Ras-related protein Rab-27A [Homo sapiens]
Length = 221
Score = 168 bits (425), Expect = 3e-42
Identities = 85/182 (46%), Positives = 121/182 (66%), Gaps = 11/182 (6%)
Query: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELD----------G 54
YDYL K L +GDSGVGKT VL+++++ FNS FI+T+GIDF+ + + G
Sbjct: 6 YDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDGATGRG 65
Query: 55 KRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADV 114
+RI LQ+WDTAGQERFR++TTA++R AMG +L++D+TNE+SF N+RNWI ++ HA +
Sbjct: 66 QRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCEN 125
Query: 115 EKMIL-GNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKM 173
++L GNK D+ D+R V +E LA YGI + ETSA N+ A L I +M
Sbjct: 126 PDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDLIMKRM 185
Query: 174 DK 175
++
Sbjct: 186 ER 187
>gi|19923264 Ras-related protein Rab-27A [Homo sapiens]
Length = 221
Score = 168 bits (425), Expect = 3e-42
Identities = 85/182 (46%), Positives = 121/182 (66%), Gaps = 11/182 (6%)
Query: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELD----------G 54
YDYL K L +GDSGVGKT VL+++++ FNS FI+T+GIDF+ + + G
Sbjct: 6 YDYLIKFLALGDSGVGKTSVLYQYTDGKFNSKFITTVGIDFREKRVVYRASGPDGATGRG 65
Query: 55 KRIKLQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADV 114
+RI LQ+WDTAGQERFR++TTA++R AMG +L++D+TNE+SF N+RNWI ++ HA +
Sbjct: 66 QRIHLQLWDTAGQERFRSLTTAFFRDAMGFLLLFDLTNEQSFLNVRNWISQLQMHAYCEN 125
Query: 115 EKMIL-GNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLARDIKAKM 173
++L GNK D+ D+R V +E LA YGI + ETSA N+ A L I +M
Sbjct: 126 PDIVLCGNKSDLEDQRVVKEEEAIALAEKYGIPYFETSAANGTNISQAIEMLLDLIMKRM 185
Query: 174 DK 175
++
Sbjct: 186 ER 187
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.137 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,512,186
Number of Sequences: 37866
Number of extensions: 231123
Number of successful extensions: 1101
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 203
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 706
Number of HSP's gapped (non-prelim): 279
length of query: 207
length of database: 18,247,518
effective HSP length: 98
effective length of query: 109
effective length of database: 14,536,650
effective search space: 1584494850
effective search space used: 1584494850
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.