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Search of human proteins with 16930817
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|16930817 DNA-dependent protein kinase catalytic
subunit-interacting protein 3 [Homo sapiens]
(187 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|16930817 DNA-dependent protein kinase catalytic subunit-inter... 387 e-108
gi|5453708 DNA-dependent protein kinase catalytic subunit-intera... 246 8e-66
gi|163644313 calcium and integrin binding 1 [Homo sapiens] 134 3e-32
gi|71274156 calcium and integrin binding family member 4 [Homo s... 106 1e-23
gi|4506025 protein phosphatase 3, regulatory subunit B, alpha is... 82 2e-16
gi|22212896 protein phosphatase 3 regulatory subunit B, beta iso... 75 4e-14
gi|6005731 calcium binding protein P22 [Homo sapiens] 58 4e-09
gi|17738308 frequenin homolog isoform 1 [Homo sapiens] 52 3e-07
gi|192447423 frequenin homolog isoform 2 [Homo sapiens] 49 3e-06
gi|58218968 calmodulin 3 [Homo sapiens] 49 3e-06
gi|4502549 calmodulin 2 [Homo sapiens] 49 3e-06
gi|5901912 calmodulin 1 [Homo sapiens] 49 3e-06
gi|19913443 hippocalcin-like 1 [Homo sapiens] 47 7e-06
gi|19913441 hippocalcin-like 1 [Homo sapiens] 47 7e-06
gi|4885111 calmodulin-like 3 [Homo sapiens] 47 1e-05
gi|11545811 hepatocellular carcinoma antigen gene 520 [Homo sapi... 47 1e-05
gi|98985795 neurocalcin delta [Homo sapiens] 45 3e-05
gi|98985793 neurocalcin delta [Homo sapiens] 45 3e-05
gi|98985791 neurocalcin delta [Homo sapiens] 45 3e-05
gi|98985789 neurocalcin delta [Homo sapiens] 45 3e-05
gi|98985787 neurocalcin delta [Homo sapiens] 45 3e-05
gi|98985785 neurocalcin delta [Homo sapiens] 45 3e-05
gi|98985783 neurocalcin delta [Homo sapiens] 45 3e-05
gi|98985778 neurocalcin delta [Homo sapiens] 45 3e-05
gi|4757902 caltractin [Homo sapiens] 44 8e-05
gi|13375787 EF-hand calcium binding domain 1 isoform a [Homo sap... 43 1e-04
gi|27886674 Kv channel interacting protein 2 isoform 4 [Homo sap... 43 2e-04
gi|78190495 Kv channel interacting protein 3 isoform 2 [Homo sap... 43 2e-04
gi|7305199 Kv channel interacting protein 3 isoform 1 [Homo sapi... 43 2e-04
gi|19913446 hippocalcin [Homo sapiens] 43 2e-04
>gi|16930817 DNA-dependent protein kinase catalytic
subunit-interacting protein 3 [Homo sapiens]
Length = 187
Score = 387 bits (995), Expect = e-108
Identities = 187/187 (100%), Positives = 187/187 (100%)
Query: 1 MGNKQTVFTHEQLEAYQDCTFFTRKEIMRLFYRYQDLAPQLVPLDYTTCPDVKVPYELIG 60
MGNKQTVFTHEQLEAYQDCTFFTRKEIMRLFYRYQDLAPQLVPLDYTTCPDVKVPYELIG
Sbjct: 1 MGNKQTVFTHEQLEAYQDCTFFTRKEIMRLFYRYQDLAPQLVPLDYTTCPDVKVPYELIG 60
Query: 61 SMPELKDNPFRQRIAQVFSEDGDGHMTLDNFLDMFSVMSEMAPRDLKAYYAFKIYDFNND 120
SMPELKDNPFRQRIAQVFSEDGDGHMTLDNFLDMFSVMSEMAPRDLKAYYAFKIYDFNND
Sbjct: 61 SMPELKDNPFRQRIAQVFSEDGDGHMTLDNFLDMFSVMSEMAPRDLKAYYAFKIYDFNND 120
Query: 121 DYICAWDLEQTVTKLTRGGLSAEEVSLVCEKVLDEADGDHDGRLSLEDFQNMILRAPDFL 180
DYICAWDLEQTVTKLTRGGLSAEEVSLVCEKVLDEADGDHDGRLSLEDFQNMILRAPDFL
Sbjct: 121 DYICAWDLEQTVTKLTRGGLSAEEVSLVCEKVLDEADGDHDGRLSLEDFQNMILRAPDFL 180
Query: 181 STFHIRI 187
STFHIRI
Sbjct: 181 STFHIRI 187
>gi|5453708 DNA-dependent protein kinase catalytic
subunit-interacting protein 2 [Homo sapiens]
Length = 187
Score = 246 bits (628), Expect = 8e-66
Identities = 115/187 (61%), Positives = 148/187 (79%)
Query: 1 MGNKQTVFTHEQLEAYQDCTFFTRKEIMRLFYRYQDLAPQLVPLDYTTCPDVKVPYELIG 60
MGNKQT+FT EQL+ YQDCTFF +K+I++L R+ +LAP LVP+DY P V VP LI
Sbjct: 1 MGNKQTIFTEEQLDNYQDCTFFNKKDILKLHSRFYELAPNLVPMDYRKSPIVHVPMSLII 60
Query: 61 SMPELKDNPFRQRIAQVFSEDGDGHMTLDNFLDMFSVMSEMAPRDLKAYYAFKIYDFNND 120
MPEL++NPF++RI FSEDG+G++T ++F+DMFSV+ E APR+LKA YAFKIYDFN D
Sbjct: 61 QMPELRENPFKERIVAAFSEDGEGNLTFNDFVDMFSVLCESAPRELKANYAFKIYDFNTD 120
Query: 121 DYICAWDLEQTVTKLTRGGLSAEEVSLVCEKVLDEADGDHDGRLSLEDFQNMILRAPDFL 180
++IC DLE T+ +LT+ L EEV LVC+KV++EAD D DG+L DF++MI +APDFL
Sbjct: 121 NFICKEDLELTLARLTKSELDEEEVVLVCDKVIEEADLDGDGKLGFADFEDMIAKAPDFL 180
Query: 181 STFHIRI 187
STFHIRI
Sbjct: 181 STFHIRI 187
>gi|163644313 calcium and integrin binding 1 [Homo sapiens]
Length = 191
Score = 134 bits (338), Expect = 3e-32
Identities = 76/190 (40%), Positives = 118/190 (62%), Gaps = 6/190 (3%)
Query: 1 MGNKQTVFTHEQLEAYQDCTFFTRKEIMRLFYRYQDLAPQLVPLDYTTCPDVKVPYELIG 60
MG + + E L YQD TF T++EI+ R+ +L PQ + +VP+E I
Sbjct: 1 MGGSGSRLSKELLAEYQDLTFLTKQEILLAHRRFCELLPQ-EQRSVESSLRAQVPFEQIL 59
Query: 61 SMPELKDNPFRQRIAQVFSED-GDGHMTLDNFLDMFSVMSEMAPRDLKAYYAFKIYDFNN 119
S+PELK NPF++RI +VFS ++ ++FLD+ SV S+ A D+K++YAF+I+DF++
Sbjct: 60 SLPELKANPFKERICRVFSTSPAKDSLSFEDFLDLLSVFSDTATPDIKSHYAFRIFDFDD 119
Query: 120 DDYICAWDLEQTVTKLTRGG----LSAEEVSLVCEKVLDEADGDHDGRLSLEDFQNMILR 175
D + DL + V LT G LSA E+ + + +L+E+D D DG ++L +FQ++I R
Sbjct: 120 DGTLNREDLSRLVNCLTGEGEDTRLSASEMKQLIDNILEESDIDRDGTINLSEFQHVISR 179
Query: 176 APDFLSTFHI 185
+PDF S+F I
Sbjct: 180 SPDFASSFKI 189
>gi|71274156 calcium and integrin binding family member 4 [Homo
sapiens]
Length = 185
Score = 106 bits (264), Expect = 1e-23
Identities = 64/176 (36%), Positives = 100/176 (56%), Gaps = 8/176 (4%)
Query: 11 EQLEAYQDCTFFTRKEIMRLFYRYQDLAPQLVPLDYTTCPDVKVPYELIGSMPELKDNPF 70
E LE YQ TF TR EI+ + + L P P Y + + + + S+P L+ NPF
Sbjct: 12 EDLEEYQALTFLTRNEILCIHDTFLKLCP---PGKYYK--EATLTMDQVSSLPALRVNPF 66
Query: 71 RQRIAQVFSEDGDGHMTLDNFLDMFSVMSEMAPRDLKAYYAFKIYDFNNDDYICAWDLEQ 130
R RI +VFS G + ++ L M SV SE A LK YAF+IYDFN + +I DL++
Sbjct: 67 RDRICRVFSHKG--MFSFEDVLGMASVFSEQACPSLKIEYAFRIYDFNENGFIDEEDLQR 124
Query: 131 TVTKLTRGGLSAEEVSL-VCEKVLDEADGDHDGRLSLEDFQNMILRAPDFLSTFHI 185
+ +L +E++ + + VL E+D D+D LS +F++ + ++PDF+++F I
Sbjct: 125 IILRLLNSDDMSEDLLMDLTNHVLSESDLDNDNMLSFSEFEHAMAKSPDFMNSFRI 180
>gi|4506025 protein phosphatase 3, regulatory subunit B, alpha
isoform 1 [Homo sapiens]
Length = 170
Score = 82.4 bits (202), Expect = 2e-16
Identities = 48/151 (31%), Positives = 75/151 (49%), Gaps = 9/151 (5%)
Query: 19 CTFFTRKEIMRLFYRYQDLAPQLVPLDYTTCPDVKVPYELIGSMPELKDNPFRQRIAQVF 78
C+ F EI RL R++ L D + V E S+PEL+ NP QR+ +F
Sbjct: 12 CSHFDADEIKRLGKRFKKL-------DLDNSGSLSV--EEFMSLPELQQNPLVQRVIDIF 62
Query: 79 SEDGDGHMTLDNFLDMFSVMSEMAPRDLKAYYAFKIYDFNNDDYICAWDLEQTVTKLTRG 138
DG+G + F++ S S ++ K +AF+IYD + D YI +L Q + +
Sbjct: 63 DTDGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGN 122
Query: 139 GLSAEEVSLVCEKVLDEADGDHDGRLSLEDF 169
L ++ + +K + AD D DGR+S E+F
Sbjct: 123 NLKDTQLQQIVDKTIINADKDGDGRISFEEF 153
>gi|22212896 protein phosphatase 3 regulatory subunit B, beta
isoform [Homo sapiens]
Length = 173
Score = 74.7 bits (182), Expect = 4e-14
Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 9/155 (5%)
Query: 19 CTFFTRKEIMRLFYRYQDLAPQLVPLDYTTCPDVKVPYELIGSMPELKDNPFRQRIAQVF 78
C+ F EI RL R++ L LD + V E S+PEL+ NP +R+ VF
Sbjct: 15 CSHFDNDEIKRLGRRFKKL-----DLDKSGSLSV----EEFMSLPELRHNPLVRRVIDVF 65
Query: 79 SEDGDGHMTLDNFLDMFSVMSEMAPRDLKAYYAFKIYDFNNDDYICAWDLEQTVTKLTRG 138
DGDG + F+ S S + K +AF IYD + D YI +L Q + +
Sbjct: 66 DTDGDGEVDFKEFILGTSQFSVKGDEEQKLRFAFSIYDMDKDGYISNGELFQVLKMMVGN 125
Query: 139 GLSAEEVSLVCEKVLDEADGDHDGRLSLEDFQNMI 173
L+ ++ + +K + D D DG++S E+F ++
Sbjct: 126 NLTDWQLQQLVDKTIIILDKDGDGKISFEEFSAVV 160
>gi|6005731 calcium binding protein P22 [Homo sapiens]
Length = 195
Score = 58.2 bits (139), Expect = 4e-09
Identities = 45/192 (23%), Positives = 82/192 (42%), Gaps = 31/192 (16%)
Query: 1 MGNK-QTVFTHEQLEAYQDCTFFTRKEIMRLFYRYQDLAPQLVPLDYTTCPDVKVPYELI 59
MG++ T+ E+LE + T F+ +I RL+ R+ L + + E
Sbjct: 1 MGSRASTLLRDEELEEIKKETGFSHSQITRLYSRFTSLDKG---------ENGTLSREDF 51
Query: 60 GSMPELKDNPFRQRIAQVFSEDGDGHMTLDNFLDMFSVMSEMAP---------------- 103
+PEL NP RI F +G+ + NF ++ P
Sbjct: 52 QRIPELAINPLGDRIINAFFPEGEDQV---NFRGFMRTLAHFRPIEDNEKSKDVNGPEPL 108
Query: 104 --RDLKAYYAFKIYDFNNDDYICAWDLEQTVTKLTRGGLSAEEVSLVCEKVLDEADGDHD 161
R K ++AF++YD + D+ I +L Q + + +S E++ + ++ + EAD D D
Sbjct: 109 NSRSNKLHFAFRLYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGD 168
Query: 162 GRLSLEDFQNMI 173
+S +F ++
Sbjct: 169 SAISFTEFVKVL 180
>gi|17738308 frequenin homolog isoform 1 [Homo sapiens]
Length = 190
Score = 52.0 bits (123), Expect = 3e-07
Identities = 46/177 (25%), Positives = 74/177 (41%), Gaps = 14/177 (7%)
Query: 1 MGNKQTVFTHEQLEAYQDCTFFTRKEIMRLFYRYQDLAPQLVPLDYTTCPDVKVPYELIG 60
MG + E +E T+FT KE+ + + + P LD + + G
Sbjct: 1 MGKSNSKLKPEVVEELTRKTYFTEKEVQQWYKGFIKDCPS-GQLDAAGFQKIYKQFFPFG 59
Query: 61 SMPELKDNPFRQRIAQVFSEDGDGHMTLDNFLDMFSVMSEMAPRDLKAYYAFKIYDFNND 120
+ F + VF E+ DG + F+ SV S D K +AFK+YD +ND
Sbjct: 60 DPTK-----FATFVFNVFDENKDGRIEFSEFIQALSVTSR-GTLDEKLRWAFKLYDLDND 113
Query: 121 DYIC---AWDLEQTVTKLTRGGLSAEEVSLVCEKVLDE----ADGDHDGRLSLEDFQ 170
YI D+ + ++ + E EK +D D + DG+L+L++FQ
Sbjct: 114 GYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQ 170
>gi|192447423 frequenin homolog isoform 2 [Homo sapiens]
Length = 172
Score = 48.5 bits (114), Expect = 3e-06
Identities = 33/108 (30%), Positives = 51/108 (47%), Gaps = 8/108 (7%)
Query: 70 FRQRIAQVFSEDGDGHMTLDNFLDMFSVMSEMAPRDLKAYYAFKIYDFNNDDYIC---AW 126
F + VF E+ DG + F+ SV S D K +AFK+YD +ND YI
Sbjct: 46 FATFVFNVFDENKDGRIEFSEFIQALSVTSR-GTLDEKLRWAFKLYDLDNDGYITRNEML 104
Query: 127 DLEQTVTKLTRGGLSAEEVSLVCEKVLDE----ADGDHDGRLSLEDFQ 170
D+ + ++ + E EK +D D + DG+L+L++FQ
Sbjct: 105 DIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDKNADGKLTLQEFQ 152
>gi|58218968 calmodulin 3 [Homo sapiens]
Length = 149
Score = 48.5 bits (114), Expect = 3e-06
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 8/120 (6%)
Query: 57 ELIGSMPELKDNPFRQRIAQVFSE-DGDGHMTLD--NFLDMFSVMSEMAPRDLKAYYAFK 113
EL M L NP + + +E D DG+ T+D FL M + + + + AF+
Sbjct: 32 ELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFR 91
Query: 114 IYDFNNDDYICAWDLEQTVTKLTRGGLSAEEVSLVCEKVLDEADGDHDGRLSLEDFQNMI 173
++D + + YI A +L +T L L+ EEV ++++ EAD D DG+++ E+F M+
Sbjct: 92 VFDKDGNGYISAAELRHVMTNLGE-KLTDEEV----DEMIREADIDGDGQVNYEEFVQMM 146
>gi|4502549 calmodulin 2 [Homo sapiens]
Length = 149
Score = 48.5 bits (114), Expect = 3e-06
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 8/120 (6%)
Query: 57 ELIGSMPELKDNPFRQRIAQVFSE-DGDGHMTLD--NFLDMFSVMSEMAPRDLKAYYAFK 113
EL M L NP + + +E D DG+ T+D FL M + + + + AF+
Sbjct: 32 ELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFR 91
Query: 114 IYDFNNDDYICAWDLEQTVTKLTRGGLSAEEVSLVCEKVLDEADGDHDGRLSLEDFQNMI 173
++D + + YI A +L +T L L+ EEV ++++ EAD D DG+++ E+F M+
Sbjct: 92 VFDKDGNGYISAAELRHVMTNLGE-KLTDEEV----DEMIREADIDGDGQVNYEEFVQMM 146
>gi|5901912 calmodulin 1 [Homo sapiens]
Length = 149
Score = 48.5 bits (114), Expect = 3e-06
Identities = 37/120 (30%), Positives = 63/120 (52%), Gaps = 8/120 (6%)
Query: 57 ELIGSMPELKDNPFRQRIAQVFSE-DGDGHMTLD--NFLDMFSVMSEMAPRDLKAYYAFK 113
EL M L NP + + +E D DG+ T+D FL M + + + + AF+
Sbjct: 32 ELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFR 91
Query: 114 IYDFNNDDYICAWDLEQTVTKLTRGGLSAEEVSLVCEKVLDEADGDHDGRLSLEDFQNMI 173
++D + + YI A +L +T L L+ EEV ++++ EAD D DG+++ E+F M+
Sbjct: 92 VFDKDGNGYISAAELRHVMTNLGE-KLTDEEV----DEMIREADIDGDGQVNYEEFVQMM 146
>gi|19913443 hippocalcin-like 1 [Homo sapiens]
Length = 193
Score = 47.4 bits (111), Expect = 7e-06
Identities = 43/176 (24%), Positives = 76/176 (43%), Gaps = 14/176 (7%)
Query: 1 MGNKQTVFTHEQLEAYQDCTFFTRKEIMRLFYRYQDLAPQLVPLDYTTCPDVKVPYELIG 60
MG + + E L+ ++ T FT E+ + + + P + T + K Y
Sbjct: 1 MGKQNSKLRPEVLQDLRENTEFTDHELQEWYKGFL----KDCPTGHLTVDEFKKIYA--N 54
Query: 61 SMPELKDNPFRQRIAQVFSEDGDGHMTLDNFLDMFSVMSEMAPRDLKAYYAFKIYDFNND 120
P + F + + + F +GDG + F+ SV S + K +AF +YD + +
Sbjct: 55 FFPYGDASKFAEHVFRTFDTNGDGTIDFREFIIALSVTSR-GKLEQKLKWAFSMYDLDGN 113
Query: 121 DYICA---WDLEQTVTKLTRGGLSAEEVSLVCEKVLD----EADGDHDGRLSLEDF 169
YI ++ Q + K+ + E EK D + D ++DG+LSLE+F
Sbjct: 114 GYISRSEMLEIVQAIYKMVSSVMKMPEDESTPEKRTDKIFRQMDTNNDGKLSLEEF 169
>gi|19913441 hippocalcin-like 1 [Homo sapiens]
Length = 193
Score = 47.4 bits (111), Expect = 7e-06
Identities = 43/176 (24%), Positives = 76/176 (43%), Gaps = 14/176 (7%)
Query: 1 MGNKQTVFTHEQLEAYQDCTFFTRKEIMRLFYRYQDLAPQLVPLDYTTCPDVKVPYELIG 60
MG + + E L+ ++ T FT E+ + + + P + T + K Y
Sbjct: 1 MGKQNSKLRPEVLQDLRENTEFTDHELQEWYKGFL----KDCPTGHLTVDEFKKIYA--N 54
Query: 61 SMPELKDNPFRQRIAQVFSEDGDGHMTLDNFLDMFSVMSEMAPRDLKAYYAFKIYDFNND 120
P + F + + + F +GDG + F+ SV S + K +AF +YD + +
Sbjct: 55 FFPYGDASKFAEHVFRTFDTNGDGTIDFREFIIALSVTSR-GKLEQKLKWAFSMYDLDGN 113
Query: 121 DYICA---WDLEQTVTKLTRGGLSAEEVSLVCEKVLD----EADGDHDGRLSLEDF 169
YI ++ Q + K+ + E EK D + D ++DG+LSLE+F
Sbjct: 114 GYISRSEMLEIVQAIYKMVSSVMKMPEDESTPEKRTDKIFRQMDTNNDGKLSLEEF 169
>gi|4885111 calmodulin-like 3 [Homo sapiens]
Length = 149
Score = 47.0 bits (110), Expect = 1e-05
Identities = 33/121 (27%), Positives = 62/121 (51%), Gaps = 8/121 (6%)
Query: 57 ELIGSMPELKDNPFRQRIAQVFSE---DGDGHMTLDNFLDMFSVMSEMAPRDLKAYYAFK 113
EL M L NP + + SE DG+G + FL M + + + + AF+
Sbjct: 32 ELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMMARKMKDTDNEEEIREAFR 91
Query: 114 IYDFNNDDYICAWDLEQTVTKLTRGGLSAEEVSLVCEKVLDEADGDHDGRLSLEDFQNMI 173
++D + + ++ A +L +T+L LS EEV ++++ AD D DG+++ E+F ++
Sbjct: 92 VFDKDGNGFVSAAELRHVMTRLGE-KLSDEEV----DEMIRAADTDGDGQVNYEEFVRVL 146
Query: 174 L 174
+
Sbjct: 147 V 147
>gi|11545811 hepatocellular carcinoma antigen gene 520 [Homo
sapiens]
Length = 196
Score = 46.6 bits (109), Expect = 1e-05
Identities = 38/166 (22%), Positives = 73/166 (43%), Gaps = 25/166 (15%)
Query: 20 TFFTRKEIMRLFYRYQDLAPQLVPLDYTTCPDVKVPYELIGSMPELKDNPFRQRIAQVFS 79
T F++ ++RL +R++ L Y + D+ + IG+ L NP RI + F
Sbjct: 21 TGFSQASLLRLHHRFRALDRN--KKGYLSRMDL----QQIGA---LAVNPLGDRIIESFF 71
Query: 80 EDGDGHMTLDNFLDMFSVMSEMAPRDL----------------KAYYAFKIYDFNNDDYI 123
DG + F+ + + + D K +YAF++YD + D I
Sbjct: 72 PDGSQRVDFPGFVRVLAHFRPVEDEDTETQDPKKPEPLNSRRNKLHYAFQLYDLDRDGKI 131
Query: 124 CAWDLEQTVTKLTRGGLSAEEVSLVCEKVLDEADGDHDGRLSLEDF 169
++ Q + + ++ E++ + ++ + EAD D DG +S +F
Sbjct: 132 SRHEMLQVLRLMVGVQVTEEQLENIADRTVQEADEDGDGAVSFVEF 177
>gi|98985795 neurocalcin delta [Homo sapiens]
Length = 193
Score = 45.4 bits (106), Expect = 3e-05
Identities = 41/176 (23%), Positives = 73/176 (41%), Gaps = 14/176 (7%)
Query: 1 MGNKQTVFTHEQLEAYQDCTFFTRKEIMRLFYRYQDLAPQLVPLDYTTCPDVKVPYELIG 60
MG + + E ++ + T FT EI + + P + + + K Y
Sbjct: 1 MGKQNSKLRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPS----GHLSMEEFKKIYG--N 54
Query: 61 SMPELKDNPFRQRIAQVFSEDGDGHMTLDNFLDMFSVMSEMAPRDLKAYYAFKIYDFNND 120
P + F + + + F +GDG + F+ SV S + K +AF +YD + +
Sbjct: 55 FFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSR-GKLEQKLKWAFSMYDLDGN 113
Query: 121 DYICA---WDLEQTVTKLTRGGLSAEEVSLV----CEKVLDEADGDHDGRLSLEDF 169
YI ++ Q + K+ + E EK+ + D + DG+LSLE+F
Sbjct: 114 GYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEF 169
>gi|98985793 neurocalcin delta [Homo sapiens]
Length = 193
Score = 45.4 bits (106), Expect = 3e-05
Identities = 41/176 (23%), Positives = 73/176 (41%), Gaps = 14/176 (7%)
Query: 1 MGNKQTVFTHEQLEAYQDCTFFTRKEIMRLFYRYQDLAPQLVPLDYTTCPDVKVPYELIG 60
MG + + E ++ + T FT EI + + P + + + K Y
Sbjct: 1 MGKQNSKLRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPS----GHLSMEEFKKIYG--N 54
Query: 61 SMPELKDNPFRQRIAQVFSEDGDGHMTLDNFLDMFSVMSEMAPRDLKAYYAFKIYDFNND 120
P + F + + + F +GDG + F+ SV S + K +AF +YD + +
Sbjct: 55 FFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSR-GKLEQKLKWAFSMYDLDGN 113
Query: 121 DYICA---WDLEQTVTKLTRGGLSAEEVSLV----CEKVLDEADGDHDGRLSLEDF 169
YI ++ Q + K+ + E EK+ + D + DG+LSLE+F
Sbjct: 114 GYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEF 169
>gi|98985791 neurocalcin delta [Homo sapiens]
Length = 193
Score = 45.4 bits (106), Expect = 3e-05
Identities = 41/176 (23%), Positives = 73/176 (41%), Gaps = 14/176 (7%)
Query: 1 MGNKQTVFTHEQLEAYQDCTFFTRKEIMRLFYRYQDLAPQLVPLDYTTCPDVKVPYELIG 60
MG + + E ++ + T FT EI + + P + + + K Y
Sbjct: 1 MGKQNSKLRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPS----GHLSMEEFKKIYG--N 54
Query: 61 SMPELKDNPFRQRIAQVFSEDGDGHMTLDNFLDMFSVMSEMAPRDLKAYYAFKIYDFNND 120
P + F + + + F +GDG + F+ SV S + K +AF +YD + +
Sbjct: 55 FFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSR-GKLEQKLKWAFSMYDLDGN 113
Query: 121 DYICA---WDLEQTVTKLTRGGLSAEEVSLV----CEKVLDEADGDHDGRLSLEDF 169
YI ++ Q + K+ + E EK+ + D + DG+LSLE+F
Sbjct: 114 GYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEF 169
>gi|98985789 neurocalcin delta [Homo sapiens]
Length = 193
Score = 45.4 bits (106), Expect = 3e-05
Identities = 41/176 (23%), Positives = 73/176 (41%), Gaps = 14/176 (7%)
Query: 1 MGNKQTVFTHEQLEAYQDCTFFTRKEIMRLFYRYQDLAPQLVPLDYTTCPDVKVPYELIG 60
MG + + E ++ + T FT EI + + P + + + K Y
Sbjct: 1 MGKQNSKLRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPS----GHLSMEEFKKIYG--N 54
Query: 61 SMPELKDNPFRQRIAQVFSEDGDGHMTLDNFLDMFSVMSEMAPRDLKAYYAFKIYDFNND 120
P + F + + + F +GDG + F+ SV S + K +AF +YD + +
Sbjct: 55 FFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSR-GKLEQKLKWAFSMYDLDGN 113
Query: 121 DYICA---WDLEQTVTKLTRGGLSAEEVSLV----CEKVLDEADGDHDGRLSLEDF 169
YI ++ Q + K+ + E EK+ + D + DG+LSLE+F
Sbjct: 114 GYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEF 169
>gi|98985787 neurocalcin delta [Homo sapiens]
Length = 193
Score = 45.4 bits (106), Expect = 3e-05
Identities = 41/176 (23%), Positives = 73/176 (41%), Gaps = 14/176 (7%)
Query: 1 MGNKQTVFTHEQLEAYQDCTFFTRKEIMRLFYRYQDLAPQLVPLDYTTCPDVKVPYELIG 60
MG + + E ++ + T FT EI + + P + + + K Y
Sbjct: 1 MGKQNSKLRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPS----GHLSMEEFKKIYG--N 54
Query: 61 SMPELKDNPFRQRIAQVFSEDGDGHMTLDNFLDMFSVMSEMAPRDLKAYYAFKIYDFNND 120
P + F + + + F +GDG + F+ SV S + K +AF +YD + +
Sbjct: 55 FFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSR-GKLEQKLKWAFSMYDLDGN 113
Query: 121 DYICA---WDLEQTVTKLTRGGLSAEEVSLV----CEKVLDEADGDHDGRLSLEDF 169
YI ++ Q + K+ + E EK+ + D + DG+LSLE+F
Sbjct: 114 GYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEF 169
>gi|98985785 neurocalcin delta [Homo sapiens]
Length = 193
Score = 45.4 bits (106), Expect = 3e-05
Identities = 41/176 (23%), Positives = 73/176 (41%), Gaps = 14/176 (7%)
Query: 1 MGNKQTVFTHEQLEAYQDCTFFTRKEIMRLFYRYQDLAPQLVPLDYTTCPDVKVPYELIG 60
MG + + E ++ + T FT EI + + P + + + K Y
Sbjct: 1 MGKQNSKLRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPS----GHLSMEEFKKIYG--N 54
Query: 61 SMPELKDNPFRQRIAQVFSEDGDGHMTLDNFLDMFSVMSEMAPRDLKAYYAFKIYDFNND 120
P + F + + + F +GDG + F+ SV S + K +AF +YD + +
Sbjct: 55 FFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSR-GKLEQKLKWAFSMYDLDGN 113
Query: 121 DYICA---WDLEQTVTKLTRGGLSAEEVSLV----CEKVLDEADGDHDGRLSLEDF 169
YI ++ Q + K+ + E EK+ + D + DG+LSLE+F
Sbjct: 114 GYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEF 169
>gi|98985783 neurocalcin delta [Homo sapiens]
Length = 193
Score = 45.4 bits (106), Expect = 3e-05
Identities = 41/176 (23%), Positives = 73/176 (41%), Gaps = 14/176 (7%)
Query: 1 MGNKQTVFTHEQLEAYQDCTFFTRKEIMRLFYRYQDLAPQLVPLDYTTCPDVKVPYELIG 60
MG + + E ++ + T FT EI + + P + + + K Y
Sbjct: 1 MGKQNSKLRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPS----GHLSMEEFKKIYG--N 54
Query: 61 SMPELKDNPFRQRIAQVFSEDGDGHMTLDNFLDMFSVMSEMAPRDLKAYYAFKIYDFNND 120
P + F + + + F +GDG + F+ SV S + K +AF +YD + +
Sbjct: 55 FFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSR-GKLEQKLKWAFSMYDLDGN 113
Query: 121 DYICA---WDLEQTVTKLTRGGLSAEEVSLV----CEKVLDEADGDHDGRLSLEDF 169
YI ++ Q + K+ + E EK+ + D + DG+LSLE+F
Sbjct: 114 GYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEF 169
>gi|98985778 neurocalcin delta [Homo sapiens]
Length = 193
Score = 45.4 bits (106), Expect = 3e-05
Identities = 41/176 (23%), Positives = 73/176 (41%), Gaps = 14/176 (7%)
Query: 1 MGNKQTVFTHEQLEAYQDCTFFTRKEIMRLFYRYQDLAPQLVPLDYTTCPDVKVPYELIG 60
MG + + E ++ + T FT EI + + P + + + K Y
Sbjct: 1 MGKQNSKLRPEVMQDLLESTDFTEHEIQEWYKGFLRDCPS----GHLSMEEFKKIYG--N 54
Query: 61 SMPELKDNPFRQRIAQVFSEDGDGHMTLDNFLDMFSVMSEMAPRDLKAYYAFKIYDFNND 120
P + F + + + F +GDG + F+ SV S + K +AF +YD + +
Sbjct: 55 FFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSR-GKLEQKLKWAFSMYDLDGN 113
Query: 121 DYICA---WDLEQTVTKLTRGGLSAEEVSLV----CEKVLDEADGDHDGRLSLEDF 169
YI ++ Q + K+ + E EK+ + D + DG+LSLE+F
Sbjct: 114 GYISKAEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEF 169
>gi|4757902 caltractin [Homo sapiens]
Length = 172
Score = 43.9 bits (102), Expect = 8e-05
Identities = 44/135 (32%), Positives = 71/135 (52%), Gaps = 17/135 (12%)
Query: 41 LVPLDYTTCPDVKVPYELIGSMPELKDNPFRQRIAQVFSE---DGDGHMTLDNFLDMFSV 97
L D T DVK EL +M L P ++ I ++ SE +G G M NF D +V
Sbjct: 39 LFDADGTGTIDVK---ELKVAMRALGFEPKKEEIKKMISEIDKEGTGKM---NFGDFLTV 92
Query: 98 MSE-MAPRDLKAYY--AFKIYDFNNDDYICAWDLEQTVTKLTRGGLSAEEVSLVCEKVLD 154
M++ M+ +D K AFK++D + I +L++ +L L+ EE+ ++++D
Sbjct: 93 MTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGEN-LTDEEL----QEMID 147
Query: 155 EADGDHDGRLSLEDF 169
EAD D DG +S ++F
Sbjct: 148 EADRDGDGEVSEQEF 162
>gi|13375787 EF-hand calcium binding domain 1 isoform a [Homo
sapiens]
Length = 211
Score = 43.1 bits (100), Expect = 1e-04
Identities = 36/171 (21%), Positives = 71/171 (41%), Gaps = 5/171 (2%)
Query: 17 QDCTFFTRKEIMRLFYRYQDLAPQLVPLDYTTCPDVKVPYELIGSMPELKDNPFRQRIAQ 76
++C F + E+ L + DL + D ++ + D+ R+ +
Sbjct: 15 KNCKHFNKFEVNCLIKLFYDLVGGVERQGLVVGLDRNAFRNILHVTFGMTDDMIMDRVFR 74
Query: 77 VFSEDGDGHMTLDNFLDMFSVMSEMAPRDLKAYYAFKIYDFNNDDYICAWD----LEQTV 132
F +D DG + + ++ S+ + + K Y F+++D N D +I + L+ ++
Sbjct: 75 GFDKDNDGCVNVLEWIHGLSLFLRGSLEE-KMKYCFEVFDLNGDGFISKEEMFHMLKNSL 133
Query: 133 TKLTRGGLSAEEVSLVCEKVLDEADGDHDGRLSLEDFQNMILRAPDFLSTF 183
K E + + E L + D DHDG+LS D++ + L F
Sbjct: 134 LKQPSEEDPDEGIKDLVEITLKKMDHDHDGKLSFADYELAVREETLLLEAF 184
>gi|27886674 Kv channel interacting protein 2 isoform 4 [Homo
sapiens]
Length = 227
Score = 42.7 bits (99), Expect = 2e-04
Identities = 41/171 (23%), Positives = 72/171 (42%), Gaps = 17/171 (9%)
Query: 11 EQLEAYQDCTFFTRKEIMRLFYRYQDLAPQLVPLDYTTCPDVKVPYELIGSM-----PEL 65
E LE Q+ T FTRKE+ L+ +++ L + CP V E + P+
Sbjct: 41 EGLEQLQEQTKFTRKELQVLYRGFKNPG----ALSFQECPSGIVNEENFKQIYSQFFPQG 96
Query: 66 KDNPFRQRIAQVFSEDGDGHMTLDNFLDMFSVMSEMAPRDLKAYYAFKIYDFNNDDYICA 125
+ + + F + DG ++ ++F+ SV+ D + +AF +YD N D I
Sbjct: 97 DSSTYATFLFNAFDTNHDGSVSFEDFVAGLSVILRGTVDD-RLNWAFNLYDLNKDGCITK 155
Query: 126 WD-------LEQTVTKLTRGGLSAEEVSLVCEKVLDEADGDHDGRLSLEDF 169
+ + + K T L E E + D + DG +++E+F
Sbjct: 156 EEMLDIMKSIYDMMGKYTYPALREEAPREHVESFFQKMDRNKDGVVTIEEF 206
>gi|78190495 Kv channel interacting protein 3 isoform 2 [Homo
sapiens]
Length = 230
Score = 42.7 bits (99), Expect = 2e-04
Identities = 39/186 (20%), Positives = 80/186 (43%), Gaps = 22/186 (11%)
Query: 11 EQLEAYQDCTFFTRKEIMRLFYRYQDLAPQLVPLDYTTCPDVKVPYELIGSMPELKDNPF 70
E L+ Q T FT+KE+ L+ +++ P + +D T + + P+ +
Sbjct: 51 EGLDQLQAQTKFTKKELQSLYRGFKNECPTGL-VDEDTFKLIYAQF-----FPQGDATTY 104
Query: 71 RQRIAQVFSEDGDGHMTLDNFLDMFSVMSEMAPRDLKAYYAFKIYDFNNDDYICAWDLEQ 130
+ F DG+G + ++F+ S++ + K +AF +YD N D YI ++
Sbjct: 105 AHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHE-KLKWAFNLYDINKDGYITKEEMLA 163
Query: 131 TVTK-----------LTRGGLSAEEVSLVCEKVLDEADGDHDGRLSLEDFQNMILRAPDF 179
+ + R AE V E+ ++ D + DG +++E+F + +
Sbjct: 164 IMKSIYDMMGRHTYPILREDAPAEHV----ERFFEKMDRNQDGVVTIEEFLEACQKDENI 219
Query: 180 LSTFHI 185
+S+ +
Sbjct: 220 MSSMQL 225
>gi|7305199 Kv channel interacting protein 3 isoform 1 [Homo
sapiens]
Length = 256
Score = 42.7 bits (99), Expect = 2e-04
Identities = 39/186 (20%), Positives = 80/186 (43%), Gaps = 22/186 (11%)
Query: 11 EQLEAYQDCTFFTRKEIMRLFYRYQDLAPQLVPLDYTTCPDVKVPYELIGSMPELKDNPF 70
E L+ Q T FT+KE+ L+ +++ P + +D T + + P+ +
Sbjct: 77 EGLDQLQAQTKFTKKELQSLYRGFKNECPTGL-VDEDTFKLIYAQF-----FPQGDATTY 130
Query: 71 RQRIAQVFSEDGDGHMTLDNFLDMFSVMSEMAPRDLKAYYAFKIYDFNNDDYICAWDLEQ 130
+ F DG+G + ++F+ S++ + K +AF +YD N D YI ++
Sbjct: 131 AHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHE-KLKWAFNLYDINKDGYITKEEMLA 189
Query: 131 TVTK-----------LTRGGLSAEEVSLVCEKVLDEADGDHDGRLSLEDFQNMILRAPDF 179
+ + R AE V E+ ++ D + DG +++E+F + +
Sbjct: 190 IMKSIYDMMGRHTYPILREDAPAEHV----ERFFEKMDRNQDGVVTIEEFLEACQKDENI 245
Query: 180 LSTFHI 185
+S+ +
Sbjct: 246 MSSMQL 251
>gi|19913446 hippocalcin [Homo sapiens]
Length = 193
Score = 42.7 bits (99), Expect = 2e-04
Identities = 40/177 (22%), Positives = 77/177 (43%), Gaps = 16/177 (9%)
Query: 1 MGNKQTVFTHEQLEAYQDCTFFTRKEIMRLFYRY-QDLAPQLVPLDYTTCPDVKVPYELI 59
MG + + E L+ ++ T F+ E+ + + +D ++ +D + K Y
Sbjct: 1 MGKQNSKLRPEMLQDLRENTEFSELELQEWYKGFLKDCPTGILNVD-----EFKKIYA-- 53
Query: 60 GSMPELKDNPFRQRIAQVFSEDGDGHMTLDNFLDMFSVMSEMAPRDLKAYYAFKIYDFNN 119
P + F + + + F + DG + F+ SV S + K +AF +YD +
Sbjct: 54 NFFPYGDASKFAEHVFRTFDTNSDGTIDFREFIIALSVTSR-GRLEQKLMWAFSMYDLDG 112
Query: 120 DDYICA---WDLEQTVTKLTRGGLSAEEVSLV----CEKVLDEADGDHDGRLSLEDF 169
+ YI ++ Q + K+ + E EK+ + D ++DG+LSLE+F
Sbjct: 113 NGYISREEMLEIVQAIYKMVSSVMKMPEDESTPEKRTEKIFRQMDTNNDGKLSLEEF 169
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.323 0.140 0.422
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,981,313
Number of Sequences: 37866
Number of extensions: 292896
Number of successful extensions: 839
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 69
Number of HSP's that attempted gapping in prelim test: 715
Number of HSP's gapped (non-prelim): 117
length of query: 187
length of database: 18,247,518
effective HSP length: 96
effective length of query: 91
effective length of database: 14,612,382
effective search space: 1329726762
effective search space used: 1329726762
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.