Search of human proteins with 169218035

Search of human proteins with 169218035

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169218035 PREDICTED: similar to pepsinogen 3, group I [Homo
sapiens]
         (87 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169218035 PREDICTED: similar to pepsinogen 3, group I [Homo s...   177   2e-45
gi|119372302 pepsinogen 4, group I [Homo sapiens]                     159   3e-40
gi|119372298 pepsinogen 3, group I [Homo sapiens]                     159   3e-40
gi|23943854 pepsinogen 5, group I [Homo sapiens]                      158   1e-39
gi|4503145 cathepsin E isoform a preproprotein [Homo sapiens]          87   4e-18
gi|4505757 progastricsin (pepsinogen C) [Homo sapiens]                 85   1e-17
gi|4503143 cathepsin D preproprotein [Homo sapiens]                    69   8e-13
gi|4758754 napsin A preproprotein [Homo sapiens]                       67   3e-12
gi|4506475 renin preproprotein [Homo sapiens]                          58   2e-09
gi|41327712 v-crk sarcoma virus CT10 oncogene homolog isoform a ...    28   2.0  
gi|41327710 v-crk sarcoma virus CT10 oncogene homolog isoform b ...    28   2.0  
gi|38570081 CUG triplet repeat, RNA-binding protein 1 isoform 2 ...    27   2.6  
gi|15375314 LIM homeobox protein 4 [Homo sapiens]                      27   3.5  
gi|62000702 diacylglycerol kinase kappa [Homo sapiens]                 27   4.5  
gi|61966701 dorsal neural-tube nuclear protein [Homo sapiens]          26   5.9  
gi|71274107 melanoma cell adhesion molecule [Homo sapiens]             26   7.7  
gi|47419911 transcriptional intermediary factor 1 alpha isoform ...    26   7.7  
gi|47419909 transcriptional intermediary factor 1 alpha isoform ...    26   7.7  

>gi|169218035 PREDICTED: similar to pepsinogen 3, group I [Homo
          sapiens]
          Length = 87

 Score =  177 bits (449), Expect = 2e-45
 Identities = 87/87 (100%), Positives = 87/87 (100%)

Query: 1  MNGEAIACAEGCQAIVDTGTSLLTGPTSPIANIQSDIGASENSDGDMVVSCSAISSLPDI 60
          MNGEAIACAEGCQAIVDTGTSLLTGPTSPIANIQSDIGASENSDGDMVVSCSAISSLPDI
Sbjct: 1  MNGEAIACAEGCQAIVDTGTSLLTGPTSPIANIQSDIGASENSDGDMVVSCSAISSLPDI 60

Query: 61 VFTINGVQYPVPPSAYILQVRRLWTIH 87
          VFTINGVQYPVPPSAYILQVRRLWTIH
Sbjct: 61 VFTINGVQYPVPPSAYILQVRRLWTIH 87


>gi|119372302 pepsinogen 4, group I [Homo sapiens]
          Length = 388

 Score =  159 bits (403), Expect = 3e-40
 Identities = 79/79 (100%), Positives = 79/79 (100%)

Query: 1   MNGEAIACAEGCQAIVDTGTSLLTGPTSPIANIQSDIGASENSDGDMVVSCSAISSLPDI 60
           MNGEAIACAEGCQAIVDTGTSLLTGPTSPIANIQSDIGASENSDGDMVVSCSAISSLPDI
Sbjct: 261 MNGEAIACAEGCQAIVDTGTSLLTGPTSPIANIQSDIGASENSDGDMVVSCSAISSLPDI 320

Query: 61  VFTINGVQYPVPPSAYILQ 79
           VFTINGVQYPVPPSAYILQ
Sbjct: 321 VFTINGVQYPVPPSAYILQ 339


>gi|119372298 pepsinogen 3, group I [Homo sapiens]
          Length = 388

 Score =  159 bits (403), Expect = 3e-40
 Identities = 79/79 (100%), Positives = 79/79 (100%)

Query: 1   MNGEAIACAEGCQAIVDTGTSLLTGPTSPIANIQSDIGASENSDGDMVVSCSAISSLPDI 60
           MNGEAIACAEGCQAIVDTGTSLLTGPTSPIANIQSDIGASENSDGDMVVSCSAISSLPDI
Sbjct: 261 MNGEAIACAEGCQAIVDTGTSLLTGPTSPIANIQSDIGASENSDGDMVVSCSAISSLPDI 320

Query: 61  VFTINGVQYPVPPSAYILQ 79
           VFTINGVQYPVPPSAYILQ
Sbjct: 321 VFTINGVQYPVPPSAYILQ 339


>gi|23943854 pepsinogen 5, group I [Homo sapiens]
          Length = 388

 Score =  158 bits (399), Expect = 1e-39
 Identities = 78/79 (98%), Positives = 78/79 (98%)

Query: 1   MNGEAIACAEGCQAIVDTGTSLLTGPTSPIANIQSDIGASENSDGDMVVSCSAISSLPDI 60
           MNGE IACAEGCQAIVDTGTSLLTGPTSPIANIQSDIGASENSDGDMVVSCSAISSLPDI
Sbjct: 261 MNGETIACAEGCQAIVDTGTSLLTGPTSPIANIQSDIGASENSDGDMVVSCSAISSLPDI 320

Query: 61  VFTINGVQYPVPPSAYILQ 79
           VFTINGVQYPVPPSAYILQ
Sbjct: 321 VFTINGVQYPVPPSAYILQ 339


>gi|4503145 cathepsin E isoform a preproprotein [Homo sapiens]
          Length = 396

 Score = 86.7 bits (213), Expect = 4e-18
 Identities = 40/78 (51%), Positives = 56/78 (71%), Gaps = 1/78 (1%)

Query: 1   MNGEAIACAEGCQAIVDTGTSLLTGPTSPIANIQSDIGASENSDGDMVVSCSAISSLPDI 60
           + G  + C+EGCQAIVDTGTSL+TGP+  I  +Q+ IGA+   DG+  V C+ ++ +PD+
Sbjct: 265 VGGTVMFCSEGCQAIVDTGTSLITGPSDKIKQLQNAIGAAP-VDGEYAVECANLNVMPDV 323

Query: 61  VFTINGVQYPVPPSAYIL 78
            FTINGV Y + P+AY L
Sbjct: 324 TFTINGVPYTLSPTAYTL 341


>gi|4505757 progastricsin (pepsinogen C) [Homo sapiens]
          Length = 388

 Score = 85.1 bits (209), Expect = 1e-17
 Identities = 38/71 (53%), Positives = 53/71 (74%)

Query: 8   CAEGCQAIVDTGTSLLTGPTSPIANIQSDIGASENSDGDMVVSCSAISSLPDIVFTINGV 67
           C+EGCQAIVDTGTSLLT P   ++ +    GA E+  G  +V+C++I +LP + F INGV
Sbjct: 267 CSEGCQAIVDTGTSLLTVPQQYMSALLQATGAQEDEYGQFLVNCNSIQNLPSLTFIINGV 326

Query: 68  QYPVPPSAYIL 78
           ++P+PPS+YIL
Sbjct: 327 EFPLPPSSYIL 337


>gi|4503143 cathepsin D preproprotein [Homo sapiens]
          Length = 412

 Score = 68.9 bits (167), Expect = 8e-13
 Identities = 31/73 (42%), Positives = 43/73 (58%)

Query: 8   CAEGCQAIVDTGTSLLTGPTSPIANIQSDIGASENSDGDMVVSCSAISSLPDIVFTINGV 67
           C EGC+AIVDTGTSL+ GP   +  +Q  IGA     G+ ++ C  +S+LP I   + G 
Sbjct: 286 CKEGCEAIVDTGTSLMVGPVDEVRELQKAIGAVPLIQGEYMIPCEKVSTLPAITLKLGGK 345

Query: 68  QYPVPPSAYILQV 80
            Y + P  Y L+V
Sbjct: 346 GYKLSPEDYTLKV 358


>gi|4758754 napsin A preproprotein [Homo sapiens]
          Length = 420

 Score = 67.0 bits (162), Expect = 3e-12
 Identities = 31/75 (41%), Positives = 45/75 (60%)

Query: 8   CAEGCQAIVDTGTSLLTGPTSPIANIQSDIGASENSDGDMVVSCSAISSLPDIVFTINGV 67
           CA+GC AI+DTGTSL+TGPT  I  + + IG      G+ ++ CS I  LP + F + GV
Sbjct: 274 CAKGCAAILDTGTSLITGPTEEIRALHAAIGGIPLLAGEYIILCSEIPKLPAVSFLLGGV 333

Query: 68  QYPVPPSAYILQVRR 82
            + +    Y++Q  R
Sbjct: 334 WFNLTAHDYVIQTTR 348


>gi|4506475 renin preproprotein [Homo sapiens]
          Length = 406

 Score = 57.8 bits (138), Expect = 2e-09
 Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 1/79 (1%)

Query: 1   MNGEAIACAEGCQAIVDTGTSLLTGPTSPIANIQSDIGASENSDGDMVVSCSAISSLPDI 60
           +    + C +GC A+VDTG S ++G TS I  +   +GA +    D VV C+   +LPDI
Sbjct: 276 VGSSTLLCEDGCLALVDTGASYISGSTSSIEKLMEALGAKKRL-FDYVVKCNEGPTLPDI 334

Query: 61  VFTINGVQYPVPPSAYILQ 79
            F + G +Y +  + Y+ Q
Sbjct: 335 SFHLGGKEYTLTSADYVFQ 353


>gi|41327712 v-crk sarcoma virus CT10 oncogene homolog isoform a
          [Homo sapiens]
          Length = 304

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 14/35 (40%), Positives = 19/35 (54%)

Query: 40 SENSDGDMVVSCSAISSLPDIVFTINGVQYPVPPS 74
          S  S GD V+S S  S +   +   +G + PVPPS
Sbjct: 40 SSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPS 74


>gi|41327710 v-crk sarcoma virus CT10 oncogene homolog isoform b
          [Homo sapiens]
          Length = 204

 Score = 27.7 bits (60), Expect = 2.0
 Identities = 14/35 (40%), Positives = 19/35 (54%)

Query: 40 SENSDGDMVVSCSAISSLPDIVFTINGVQYPVPPS 74
          S  S GD V+S S  S +   +   +G + PVPPS
Sbjct: 40 SSTSPGDYVLSVSENSRVSHYIINSSGPRPPVPPS 74


>gi|38570081 CUG triplet repeat, RNA-binding protein 1 isoform 2
           [Homo sapiens]
          Length = 483

 Score = 27.3 bits (59), Expect = 2.6
 Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 4/68 (5%)

Query: 2   NGEAIACAEGCQAIVDTGTSLLTGPTSPIANIQSDIGASENSDG----DMVVSCSAISSL 57
           N  A+A A        +GT+ LT  +SP++ + S  G+S +S      + + S  A+ +L
Sbjct: 259 NLAALAAAASAAQNTPSGTNALTTSSSPLSVLTSSAGSSPSSSSSNSVNPIASLGALQTL 318

Query: 58  PDIVFTIN 65
                 +N
Sbjct: 319 AGATAGLN 326


>gi|15375314 LIM homeobox protein 4 [Homo sapiens]
          Length = 390

 Score = 26.9 bits (58), Expect = 3.5
 Identities = 20/61 (32%), Positives = 28/61 (45%)

Query: 18  TGTSLLTGPTSPIANIQSDIGASENSDGDMVVSCSAISSLPDIVFTINGVQYPVPPSAYI 77
           TG  L+ G  S     QS     + S   +  S S+ISSLP     +NG+ Y V  +  I
Sbjct: 281 TGGQLMNGSFSMDGTGQSYQDLRDGSPYGIPQSPSSISSLPSHAPLLNGLDYTVDSNLGI 340

Query: 78  L 78
           +
Sbjct: 341 I 341


>gi|62000702 diacylglycerol kinase kappa [Homo sapiens]
          Length = 1271

 Score = 26.6 bits (57), Expect = 4.5
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 6/53 (11%)

Query: 21   SLLTGPTSPIANIQSDIGASENSDGDM-VVSCSAISSLP-----DIVFTINGV 67
            S+L G  +  ANI +DI   ++S  +M   SC  I +L      D+ F++ G+
Sbjct: 1103 SVLMGSVNASANILNDIFYGQDSGNEMGAASCIPIETLSRNDAVDVTFSLKGL 1155


>gi|61966701 dorsal neural-tube nuclear protein [Homo sapiens]
          Length = 398

 Score = 26.2 bits (56), Expect = 5.9
 Identities = 17/40 (42%), Positives = 20/40 (50%), Gaps = 5/40 (12%)

Query: 24  TGPTSPIANIQSD-----IGASENSDGDMVVSCSAISSLP 58
           TGPTSP     S      + +SE S G   + CSA S LP
Sbjct: 177 TGPTSPATPRPSSASGGFVDSSEGSAGSGPLWCSAESCLP 216


>gi|71274107 melanoma cell adhesion molecule [Homo sapiens]
          Length = 646

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 6/51 (11%)

Query: 12  CQAI-VDTGTSLLTGPTSPIANIQSDI----GASENSDG-DMVVSCSAISS 56
           CQ + +DT  SLL+ P   + N  SD+     A E  +G  + ++C A SS
Sbjct: 320 CQGLDLDTMISLLSEPQELLVNYVSDVRVSPAAPERQEGSSLTLTCEAESS 370


>gi|47419911 transcriptional intermediary factor 1 alpha isoform a
           [Homo sapiens]
          Length = 1050

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)

Query: 28  SPIANIQSDIGASENSDGDMVVSCSAISSLPDIVFTINGVQY--PVPPSAYILQ 79
           SP+ ++ S +G S N      + CS+   L +IV     + +  P PPS   +Q
Sbjct: 606 SPMIDLSSPVGGSYNLPSLPDIDCSSTIMLDNIVRKDTNIDHGQPRPPSNRTVQ 659


>gi|47419909 transcriptional intermediary factor 1 alpha isoform b
           [Homo sapiens]
          Length = 1016

 Score = 25.8 bits (55), Expect = 7.7
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 2/54 (3%)

Query: 28  SPIANIQSDIGASENSDGDMVVSCSAISSLPDIVFTINGVQY--PVPPSAYILQ 79
           SP+ ++ S +G S N      + CS+   L +IV     + +  P PPS   +Q
Sbjct: 572 SPMIDLSSPVGGSYNLPSLPDIDCSSTIMLDNIVRKDTNIDHGQPRPPSNRTVQ 625


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.316    0.132    0.395 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,485,271
Number of Sequences: 37866
Number of extensions: 115238
Number of successful extensions: 301
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 286
Number of HSP's gapped (non-prelim): 18
length of query: 87
length of database: 18,247,518
effective HSP length: 59
effective length of query: 28
effective length of database: 16,013,424
effective search space: 448375872
effective search space used: 448375872
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.