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Search of human proteins with 169217959
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169217959 PREDICTED: similar to hCG2042704, partial [Homo
sapiens]
(300 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169209217 PREDICTED: similar to hCG2042704 [Homo sapiens] 615 e-176
gi|169217959 PREDICTED: similar to hCG2042704, partial [Homo sap... 615 e-176
gi|239745068 PREDICTED: similar to hCG2042704 [Homo sapiens] 564 e-161
gi|169218206 PREDICTED: similar to hCG2042704 [Homo sapiens] 227 1e-59
gi|170016069 zinc finger, CCHC domain containing 2 [Homo sapiens] 87 2e-17
gi|21735419 zinc finger, CCHC domain containing 14 [Homo sapiens] 66 3e-11
gi|156416026 zinc finger protein 219 [Homo sapiens] 42 7e-04
gi|156415998 zinc finger protein 219 [Homo sapiens] 42 7e-04
gi|156415996 zinc finger protein 219 [Homo sapiens] 42 7e-04
gi|239749482 PREDICTED: hypothetical protein [Homo sapiens] 39 0.004
gi|239743620 PREDICTED: hypothetical protein [Homo sapiens] 39 0.004
gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo ... 39 0.006
gi|154689780 son of sevenless homolog 2 [Homo sapiens] 37 0.016
gi|55741677 SET domain containing 1A [Homo sapiens] 37 0.021
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 37 0.021
gi|19923191 minichromosome maintenance complex component 3 assoc... 36 0.036
gi|13876384 cell division cycle associated 3 [Homo sapiens] 36 0.036
gi|91208423 thyroid receptor-interacting protein 6 [Homo sapiens] 36 0.047
gi|39995080 hypothetical protein LOC79567 [Homo sapiens] 36 0.047
gi|239740722 PREDICTED: hypothetical protein [Homo sapiens] 35 0.081
gi|4758392 forkhead box D1 [Homo sapiens] 35 0.11
gi|50345997 E1A binding protein p300 [Homo sapiens] 34 0.14
gi|169207312 PREDICTED: hypothetical protein [Homo sapiens] 34 0.14
gi|239750650 PREDICTED: hypothetical protein [Homo sapiens] 34 0.14
gi|89037350 PREDICTED: hypothetical protein [Homo sapiens] 34 0.14
gi|189181750 human immunodeficiency virus type I enhancer bindin... 34 0.14
gi|116089331 human immunodeficiency virus type I enhancer bindin... 34 0.14
gi|153792074 proline rich 12 [Homo sapiens] 34 0.14
gi|222831660 family with sequence similarity 171, member A2 [Hom... 34 0.18
gi|19923901 hypothetical protein LOC91523 [Homo sapiens] 34 0.18
>gi|169209217 PREDICTED: similar to hCG2042704 [Homo sapiens]
Length = 511
Score = 615 bits (1586), Expect = e-176
Identities = 300/300 (100%), Positives = 300/300 (100%)
Query: 1 DLARKDYHSLRDSEIKANNPADLGSLTNLTDEVVRSKLLVSLALLGSEQSEAAGVLYRKL 60
DLARKDYHSLRDSEIKANNPADLGSLTNLTDEVVRSKLLVSLALLGSEQSEAAGVLYRKL
Sbjct: 212 DLARKDYHSLRDSEIKANNPADLGSLTNLTDEVVRSKLLVSLALLGSEQSEAAGVLYRKL 271
Query: 61 THLNEGRTGDEFLLPFTMSSNHRAFSFHQKQVLCQELTQIQSSLNGGGGHLPGLPQASTV 120
THLNEGRTGDEFLLPFTMSSNHRAFSFHQKQVLCQELTQIQSSLNGGGGHLPGLPQASTV
Sbjct: 272 THLNEGRTGDEFLLPFTMSSNHRAFSFHQKQVLCQELTQIQSSLNGGGGHLPGLPQASTV 331
Query: 121 HPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALSPHPQSPLRAPKPPDLRLAPLGQERLQ 180
HPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALSPHPQSPLRAPKPPDLRLAPLGQERLQ
Sbjct: 332 HPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALSPHPQSPLRAPKPPDLRLAPLGQERLQ 391
Query: 181 GPWVRGSAGAVRETSAITHIAAPWFPQIWYLLLEKEGAVAMPEAAGEVNIARHRASPSEL 240
GPWVRGSAGAVRETSAITHIAAPWFPQIWYLLLEKEGAVAMPEAAGEVNIARHRASPSEL
Sbjct: 392 GPWVRGSAGAVRETSAITHIAAPWFPQIWYLLLEKEGAVAMPEAAGEVNIARHRASPSEL 451
Query: 241 LTPYRWRPCLGPVLLGACARDVAVRVSSFMDTCMLYDSILCGPLAYVSVQGCPEGSCSTW 300
LTPYRWRPCLGPVLLGACARDVAVRVSSFMDTCMLYDSILCGPLAYVSVQGCPEGSCSTW
Sbjct: 452 LTPYRWRPCLGPVLLGACARDVAVRVSSFMDTCMLYDSILCGPLAYVSVQGCPEGSCSTW 511
>gi|169217959 PREDICTED: similar to hCG2042704, partial [Homo
sapiens]
Length = 300
Score = 615 bits (1586), Expect = e-176
Identities = 300/300 (100%), Positives = 300/300 (100%)
Query: 1 DLARKDYHSLRDSEIKANNPADLGSLTNLTDEVVRSKLLVSLALLGSEQSEAAGVLYRKL 60
DLARKDYHSLRDSEIKANNPADLGSLTNLTDEVVRSKLLVSLALLGSEQSEAAGVLYRKL
Sbjct: 1 DLARKDYHSLRDSEIKANNPADLGSLTNLTDEVVRSKLLVSLALLGSEQSEAAGVLYRKL 60
Query: 61 THLNEGRTGDEFLLPFTMSSNHRAFSFHQKQVLCQELTQIQSSLNGGGGHLPGLPQASTV 120
THLNEGRTGDEFLLPFTMSSNHRAFSFHQKQVLCQELTQIQSSLNGGGGHLPGLPQASTV
Sbjct: 61 THLNEGRTGDEFLLPFTMSSNHRAFSFHQKQVLCQELTQIQSSLNGGGGHLPGLPQASTV 120
Query: 121 HPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALSPHPQSPLRAPKPPDLRLAPLGQERLQ 180
HPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALSPHPQSPLRAPKPPDLRLAPLGQERLQ
Sbjct: 121 HPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALSPHPQSPLRAPKPPDLRLAPLGQERLQ 180
Query: 181 GPWVRGSAGAVRETSAITHIAAPWFPQIWYLLLEKEGAVAMPEAAGEVNIARHRASPSEL 240
GPWVRGSAGAVRETSAITHIAAPWFPQIWYLLLEKEGAVAMPEAAGEVNIARHRASPSEL
Sbjct: 181 GPWVRGSAGAVRETSAITHIAAPWFPQIWYLLLEKEGAVAMPEAAGEVNIARHRASPSEL 240
Query: 241 LTPYRWRPCLGPVLLGACARDVAVRVSSFMDTCMLYDSILCGPLAYVSVQGCPEGSCSTW 300
LTPYRWRPCLGPVLLGACARDVAVRVSSFMDTCMLYDSILCGPLAYVSVQGCPEGSCSTW
Sbjct: 241 LTPYRWRPCLGPVLLGACARDVAVRVSSFMDTCMLYDSILCGPLAYVSVQGCPEGSCSTW 300
>gi|239745068 PREDICTED: similar to hCG2042704 [Homo sapiens]
Length = 618
Score = 564 bits (1454), Expect = e-161
Identities = 277/281 (98%), Positives = 278/281 (98%)
Query: 1 DLARKDYHSLRDSEIKANNPADLGSLTNLTDEVVRSKLLVSLALLGSEQSEAAGVLYRKL 60
DLARKDYHSLRDSEIKANNPADLGSLTNLTDEVVRSKLLVSLALLGSEQSEAAGVLYRKL
Sbjct: 212 DLARKDYHSLRDSEIKANNPADLGSLTNLTDEVVRSKLLVSLALLGSEQSEAAGVLYRKL 271
Query: 61 THLNEGRTGDEFLLPFTMSSNHRAFSFHQKQVLCQELTQIQSSLNGGGGHLPGLPQASTV 120
THLNEGRTGDEFLLPFTMSSNHRAFSFHQKQVLCQELTQIQSSLNGGGGHLPGLPQASTV
Sbjct: 272 THLNEGRTGDEFLLPFTMSSNHRAFSFHQKQVLCQELTQIQSSLNGGGGHLPGLPQASTV 331
Query: 121 HPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALSPHPQSPLRAPKPPDLRLAPLGQERLQ 180
HPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALSPHPQSPLRAPKPPDLRLAPLGQERLQ
Sbjct: 332 HPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALSPHPQSPLRAPKPPDLRLAPLGQERLQ 391
Query: 181 GPWVRGSAGAVRETSAITHIAAPWFPQIWYLLLEKEGAVAMPEAAGEVNIARHRASPSEL 240
GPWVRGSAGAVRETSAITHIAAPWFPQIWYLLLEKEGAVAMPEAAGEVNIARHR SPSEL
Sbjct: 392 GPWVRGSAGAVRETSAITHIAAPWFPQIWYLLLEKEGAVAMPEAAGEVNIARHRPSPSEL 451
Query: 241 LTPYRWRPCLGPVLLGACARDVAVRVSSFMDTCMLYDSILC 281
LTPYRWRPCLGPVLLGACARDVAVRVSSFMDTCMLYD +C
Sbjct: 452 LTPYRWRPCLGPVLLGACARDVAVRVSSFMDTCMLYDVRVC 492
>gi|169218206 PREDICTED: similar to hCG2042704 [Homo sapiens]
Length = 317
Score = 227 bits (578), Expect = 1e-59
Identities = 115/117 (98%), Positives = 115/117 (98%)
Query: 1 DLARKDYHSLRDSEIKANNPADLGSLTNLTDEVVRSKLLVSLALLGSEQSEAAGVLYRKL 60
DLARKDYHSLRDSEIKANNPADLGSLTNLTDEVVRSKLLVSLALLGSEQSEAAGVLYRKL
Sbjct: 201 DLARKDYHSLRDSEIKANNPADLGSLTNLTDEVVRSKLLVSLALLGSEQSEAAGVLYRKL 260
Query: 61 THLNEGRTGDEFLLPFTMSSNHRAFSFHQKQVLCQELTQIQSSLNGGGGHLPGLPQA 117
THLNEGRTGDEFLLPFTMSSNHRAF FHQKQVL QELTQIQSSLNGGGGHLPGLPQA
Sbjct: 261 THLNEGRTGDEFLLPFTMSSNHRAFCFHQKQVLRQELTQIQSSLNGGGGHLPGLPQA 317
>gi|170016069 zinc finger, CCHC domain containing 2 [Homo sapiens]
Length = 1178
Score = 86.7 bits (213), Expect = 2e-17
Identities = 60/159 (37%), Positives = 77/159 (48%), Gaps = 52/159 (32%)
Query: 1 DLARKDYHSLRDSEIKANNPADLGSLTNLTDEVVRSKLLVSLALLGSEQSEAAGVLYRKL 60
DLARKDYH LRDSE KAN +D G L + + VRS+L+V LALLGSE EAAG L+R L
Sbjct: 136 DLARKDYHYLRDSEAKANGLSDPGPLADFREPAVRSRLIVYLALLGSENREAAGRLHRLL 195
Query: 61 THLN-----------EGRTG---------------------------------------- 69
++ EG G
Sbjct: 196 PQVDSVLKSLRAARGEGSRGGAEDERGEDGDGEQDAEKDGSGPEGGIVEPRVGGGLGSRA 255
Query: 70 -DEFLLPFTMSSNHRAFSFHQKQVLCQELTQIQSSLNGG 107
+E LL FTM+S H AFSFHQ+ L + L +++++L GG
Sbjct: 256 QEELLLLFTMASLHPAFSFHQRVTLREHLERLRAALRGG 294
>gi|21735419 zinc finger, CCHC domain containing 14 [Homo sapiens]
Length = 949
Score = 66.2 bits (160), Expect = 3e-11
Identities = 39/62 (62%), Positives = 41/62 (66%), Gaps = 9/62 (14%)
Query: 78 MSSNHRAFSFHQKQVLCQELTQIQSSLNGGGGH----LPG----LPQASTVHPKSPPRVP 129
M+SNH AFSFHQKQVL QELTQIQSSLNGGGGH PG LP H K PR
Sbjct: 1 MASNHPAFSFHQKQVLRQELTQIQSSLNGGGGHGGKGAPGPGGALPTCPACH-KITPRTE 59
Query: 130 SP 131
+P
Sbjct: 60 AP 61
>gi|156416026 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 42.0 bits (97), Expect = 7e-04
Identities = 51/181 (28%), Positives = 66/181 (36%), Gaps = 18/181 (9%)
Query: 95 QELTQIQSSLNGGGGHLPGLPQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALS 154
QE + SL G L S P P P P P+P + +R A +
Sbjct: 200 QEEELLHHSLTAHGAPERPLAATSAAPPPQPQPQPPPQPEPRSVPQPEPEPEPEREATPT 259
Query: 155 PHPQSPLRAPKPPDLRLAPLGQERLQGPWVRGSAGAVRETSAITHIAAP----WFPQIWY 210
P P +P P PP+ R GQ Q +++G +R+ A A P F + W+
Sbjct: 260 PAPAAPEEPPAPPEFRCQVCGQSFTQSWFLKGH---MRKHKASFDHACPVCGRCFKEPWF 316
Query: 211 LL------LEKEGAVAMPEAAGEVNIARHRASPSELLTPYRWRPCLGPVLLGACARDVAV 264
L K G + P A AR P L Y LGP LL A A A
Sbjct: 317 LKNHMKVHASKLGPLRAPGPAS--GPARAPQPPDLGLLAYE---PLGPALLLAPAPTPAE 371
Query: 265 R 265
R
Sbjct: 372 R 372
>gi|156415998 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 42.0 bits (97), Expect = 7e-04
Identities = 51/181 (28%), Positives = 66/181 (36%), Gaps = 18/181 (9%)
Query: 95 QELTQIQSSLNGGGGHLPGLPQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALS 154
QE + SL G L S P P P P P+P + +R A +
Sbjct: 200 QEEELLHHSLTAHGAPERPLAATSAAPPPQPQPQPPPQPEPRSVPQPEPEPEPEREATPT 259
Query: 155 PHPQSPLRAPKPPDLRLAPLGQERLQGPWVRGSAGAVRETSAITHIAAP----WFPQIWY 210
P P +P P PP+ R GQ Q +++G +R+ A A P F + W+
Sbjct: 260 PAPAAPEEPPAPPEFRCQVCGQSFTQSWFLKGH---MRKHKASFDHACPVCGRCFKEPWF 316
Query: 211 LL------LEKEGAVAMPEAAGEVNIARHRASPSELLTPYRWRPCLGPVLLGACARDVAV 264
L K G + P A AR P L Y LGP LL A A A
Sbjct: 317 LKNHMKVHASKLGPLRAPGPAS--GPARAPQPPDLGLLAYE---PLGPALLLAPAPTPAE 371
Query: 265 R 265
R
Sbjct: 372 R 372
>gi|156415996 zinc finger protein 219 [Homo sapiens]
Length = 722
Score = 42.0 bits (97), Expect = 7e-04
Identities = 51/181 (28%), Positives = 66/181 (36%), Gaps = 18/181 (9%)
Query: 95 QELTQIQSSLNGGGGHLPGLPQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALS 154
QE + SL G L S P P P P P+P + +R A +
Sbjct: 200 QEEELLHHSLTAHGAPERPLAATSAAPPPQPQPQPPPQPEPRSVPQPEPEPEPEREATPT 259
Query: 155 PHPQSPLRAPKPPDLRLAPLGQERLQGPWVRGSAGAVRETSAITHIAAP----WFPQIWY 210
P P +P P PP+ R GQ Q +++G +R+ A A P F + W+
Sbjct: 260 PAPAAPEEPPAPPEFRCQVCGQSFTQSWFLKGH---MRKHKASFDHACPVCGRCFKEPWF 316
Query: 211 LL------LEKEGAVAMPEAAGEVNIARHRASPSELLTPYRWRPCLGPVLLGACARDVAV 264
L K G + P A AR P L Y LGP LL A A A
Sbjct: 317 LKNHMKVHASKLGPLRAPGPAS--GPARAPQPPDLGLLAYE---PLGPALLLAPAPTPAE 371
Query: 265 R 265
R
Sbjct: 372 R 372
>gi|239749482 PREDICTED: hypothetical protein [Homo sapiens]
Length = 195
Score = 39.3 bits (90), Expect = 0.004
Identities = 32/93 (34%), Positives = 39/93 (41%), Gaps = 9/93 (9%)
Query: 106 GGGGHLPGLPQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALSPH----PQSPL 161
GGGG P + P+ P VP+ P P L P + PH P S L
Sbjct: 86 GGGGGDIASPLPPALQPRGAPAVPAA-PSPGPLPARPSSPPPRPSLPSGPHRPVLPPSAL 144
Query: 162 RAPKPPDLRLAPLG----QERLQGPWVRGSAGA 190
AP+PP R P G +E+ Q P R AGA
Sbjct: 145 AAPRPPLARPLPQGSVTAREQEQRPRSRRRAGA 177
Score = 32.0 bits (71), Expect = 0.68
Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 2/65 (3%)
Query: 108 GGHLPGLPQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALSPHPQSPLRAPKPP 167
G H P LP ++ P+ P + P P+ ++ +P+ R A +P P+ A
Sbjct: 133 GPHRPVLPPSALAAPRPP--LARPLPQGSVTAREQEQRPRSRRRAGAPEALGPVHAGSDL 190
Query: 168 DLRLA 172
+LRLA
Sbjct: 191 ELRLA 195
>gi|239743620 PREDICTED: hypothetical protein [Homo sapiens]
Length = 285
Score = 39.3 bits (90), Expect = 0.004
Identities = 32/93 (34%), Positives = 39/93 (41%), Gaps = 9/93 (9%)
Query: 106 GGGGHLPGLPQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALSPH----PQSPL 161
GGGG P + P+ P VP+ P P L P + PH P S L
Sbjct: 86 GGGGGDIASPLPPALQPRGAPAVPAA-PSPGPLPARPSSPPPRPSLPSGPHRPVLPPSAL 144
Query: 162 RAPKPPDLRLAPLG----QERLQGPWVRGSAGA 190
AP+PP R P G +E+ Q P R AGA
Sbjct: 145 AAPRPPLARPLPQGSVTAREQEQRPRSRRRAGA 177
>gi|148762969 myeloid/lymphoid or mixed-lineage leukemia 2 [Homo
sapiens]
Length = 5537
Score = 38.9 bits (89), Expect = 0.006
Identities = 20/61 (32%), Positives = 27/61 (44%), Gaps = 2/61 (3%)
Query: 122 PKSPPRVPSPHPKPALLTLSLHFKPQDRTAALSPHPQSPLRAPKPPDLRLAPLGQERLQG 181
P P+ PH P LH PQ LSP P+ P +P+P + L+P +E
Sbjct: 786 PHLSPQAEGPHLSPQ--PEELHLSPQTEEPHLSPVPEEPCLSPQPEESHLSPQSEEPCLS 843
Query: 182 P 182
P
Sbjct: 844 P 844
Score = 34.3 bits (77), Expect = 0.14
Identities = 36/150 (24%), Positives = 57/150 (38%), Gaps = 28/150 (18%)
Query: 115 PQASTVHPKSPPRVPSPHPKPALLTLSLHFKP------------QDRTAALSPHPQSPLR 162
P+ S P SP P+ +L++L L P + LSP P+ P
Sbjct: 693 PEDSPTSPPPEDSPASPPPEDSLMSLPLEESPLLPLPEEPQLCPRSEGPHLSPRPEEPHL 752
Query: 163 APKPPDLRLAPLGQERLQGPWVRGSAGAVRETSAITHIAAPWFPQIWYLLLEKEGAVAMP 222
+P+P + L+P +E P + A P P +L + EG P
Sbjct: 753 SPRPEEPHLSPQAEEPHLSP----------QPEEPCLCAVPEEP---HLSPQAEGPHLSP 799
Query: 223 EAAGEVNIARHRASPSELLTPYRWRPCLGP 252
+ E++++ P L+P PCL P
Sbjct: 800 QPE-ELHLSPQTEEPH--LSPVPEEPCLSP 826
Score = 33.5 bits (75), Expect = 0.23
Identities = 22/85 (25%), Positives = 37/85 (43%), Gaps = 6/85 (7%)
Query: 89 QKQVLCQELTQIQSSLNGGGGHLPGLPQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQD 148
++ LC + S G HL P+ + P++ SP P+ L+ PQ
Sbjct: 775 EEPCLCAVPEEPHLSPQAEGPHLSPQPEELHLSPQTEEPHLSPVPEEPCLS------PQP 828
Query: 149 RTAALSPHPQSPLRAPKPPDLRLAP 173
+ LSP + P +P+P + L+P
Sbjct: 829 EESHLSPQSEEPCLSPRPEESHLSP 853
Score = 30.8 bits (68), Expect = 1.5
Identities = 21/68 (30%), Positives = 30/68 (44%), Gaps = 6/68 (8%)
Query: 115 PQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALSPHPQSPLRAPKPPDLRLAPL 174
P+ S + P PP V P P + LS P + LSP P+ +P P RL+P
Sbjct: 639 PEESPMSP--PPEVSRLSPLPVVSRLS----PPPEESPLSPPPEESPTSPPPEASRLSPP 692
Query: 175 GQERLQGP 182
++ P
Sbjct: 693 PEDSPTSP 700
Score = 29.6 bits (65), Expect = 3.4
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 6/67 (8%)
Query: 122 PKSPPRVPSP-HPKPALLTLSLHFK-----PQDRTAALSPHPQSPLRAPKPPDLRLAPLG 175
P SPP SP P P L F+ P + LSP P++ +P P D ++P
Sbjct: 580 PMSPPPEESPMSPPPEASRLFPPFEESPLSPPPEESPLSPPPEASRLSPPPEDSPMSPPP 639
Query: 176 QERLQGP 182
+E P
Sbjct: 640 EESPMSP 646
Score = 29.6 bits (65), Expect = 3.4
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 5/54 (9%)
Query: 122 PKSPPRVPSP-HPKPALLTLSLHFKPQDRTAALSPHPQSPLRAPKPPDLRLAPL 174
P SPP SP P P LS P + +SP P+ +P P RL+PL
Sbjct: 607 PLSPPPEESPLSPPPEASRLS----PPPEDSPMSPPPEESPMSPPPEVSRLSPL 656
Score = 29.6 bits (65), Expect = 3.4
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 10/63 (15%)
Query: 115 PQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALSPHPQSPL----RAPKPPDLR 170
P+ S + P+S SP P+ + H P+ LSP P+ P + P P +L
Sbjct: 828 PEESHLSPQSEEPCLSPRPEES------HLSPELEKPPLSPRPEKPPEEPGQCPAPEELP 881
Query: 171 LAP 173
L P
Sbjct: 882 LFP 884
Score = 28.9 bits (63), Expect = 5.8
Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 6/68 (8%)
Query: 115 PQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALSPHPQSPLRAPKPPDLRLAPL 174
P+AS + P PP P P L LS +P + + LSP P+ +P P +PL
Sbjct: 462 PEASRLSP--PPEELPASPLPEALHLS---RPLEESP-LSPPPEESPLSPPPESSPFSPL 515
Query: 175 GQERLQGP 182
+ L P
Sbjct: 516 EESPLSPP 523
Score = 28.9 bits (63), Expect = 5.8
Identities = 21/66 (31%), Positives = 27/66 (40%), Gaps = 12/66 (18%)
Query: 122 PKSPPRVPSPHPKPALLTLSLHFKPQDRTAALSP--------HPQSPLRAPKPPDLRLAP 173
P+ PP P P P L L P +LSP P P +P P +L L+P
Sbjct: 864 PEKPPEEPGQCPAPEELPLF----PPPGEPSLSPLLGEPALSEPGEPPLSPLPEELPLSP 919
Query: 174 LGQERL 179
G+ L
Sbjct: 920 SGEPSL 925
Score = 28.9 bits (63), Expect = 5.8
Identities = 33/117 (28%), Positives = 43/117 (36%), Gaps = 22/117 (18%)
Query: 95 QELTQIQSSLNGGGGHLPGLPQ--ASTVHPKSPPRVPSP-------------HPKPALLT 139
Q L Q L G G G Q + P+ PPR+P+P HP P
Sbjct: 4254 QGLLGCQPQLGGFPGPQTGPLQELGAGPRPQGPPRLPAPPGALSTGPVLGPVHPTP---P 4310
Query: 140 LSLHFKPQDRTAALSPHPQSPLRAPKPPDLRLAPLGQERLQGPWVRGSAGAVRETSA 196
S +P+ + SP Q P A PP G + QGP + G V +A
Sbjct: 4311 PSSPQEPKRPSQLPSPSSQLPTEAQLPP----THPGTPKPQGPTLEPPPGRVSPAAA 4363
Score = 28.5 bits (62), Expect = 7.6
Identities = 24/86 (27%), Positives = 32/86 (37%), Gaps = 13/86 (15%)
Query: 109 GHLPGLPQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQDR----TAALSPHPQSPLRAP 164
G L P VHP PP P +P+ L P + T +P PQ P
Sbjct: 4294 GALSTGPVLGPVHPTPPPSSPQEPKRPSQLPSPSSQLPTEAQLPPTHPGTPKPQGP--TL 4351
Query: 165 KPPDLRLAPLGQERLQ-------GPW 183
+PP R++P + GPW
Sbjct: 4352 EPPPGRVSPAAAQLADTLFSKGLGPW 4377
Score = 28.1 bits (61), Expect = 9.9
Identities = 21/60 (35%), Positives = 28/60 (46%), Gaps = 8/60 (13%)
Query: 115 PQASTVHPKSPPRVPSP-HPKPALLTLSLHFKPQDRTAALSPHPQSPLRAPKPPDLRLAP 173
P+AS P SPP SP P P L S P + LSP P+ +P P + ++P
Sbjct: 540 PEAS---PLSPPFEESPLSPPPEELPTS----PPPEASRLSPPPEESPMSPPPEESPMSP 592
>gi|154689780 son of sevenless homolog 2 [Homo sapiens]
Length = 1332
Score = 37.4 bits (85), Expect = 0.016
Identities = 33/120 (27%), Positives = 44/120 (36%), Gaps = 10/120 (8%)
Query: 112 PGLPQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQD--RTAALSPHPQSPLRAPK---- 165
P +P PK PRVP P LH P R P PLR P+
Sbjct: 1173 PAIPPRQPPPPKVKPRVPVP---TGAFDGPLHSPPPPPPRDPLPDTPPPVPLRPPEHFIN 1229
Query: 166 -PPDLRLAPLGQERLQGPWVRGSAGAVRETSAITHIAAPWFPQIWYLLLEKEGAVAMPEA 224
P +L+ PLG W+R + S +P P+ Y+L + +A P A
Sbjct: 1230 CPFNLQPPPLGHLHRDSDWLRDISTCPNSPSTPPSTPSPRVPRRCYVLSSSQNNLAHPPA 1289
>gi|55741677 SET domain containing 1A [Homo sapiens]
Length = 1707
Score = 37.0 bits (84), Expect = 0.021
Identities = 23/74 (31%), Positives = 28/74 (37%), Gaps = 2/74 (2%)
Query: 94 CQELTQIQSSLNGGGGHLPGLPQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQDRTAAL 153
C ++ S + GG P P P PP P P P P L +L L + P L
Sbjct: 577 CSSGDDMEISDDDRGGSPPPAPTPPQQPPPPPP--PPPPPPPYLASLPLGYPPHQPAYLL 634
Query: 154 SPHPQSPLRAPKPP 167
P P P PP
Sbjct: 635 PPRPDGPPPPEYPP 648
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 37.0 bits (84), Expect = 0.021
Identities = 47/176 (26%), Positives = 70/176 (39%), Gaps = 60/176 (34%)
Query: 90 KQVLCQELTQIQSSLNGGGGH---LPGLPQASTVHPKSPPRVPSPHPKPALLTLSLHFKP 146
+Q L Q L+ Q S+ GGH PGLPQA P+ PSP P ++P
Sbjct: 1477 QQALAQ-LSSRQGSVTAPGGHPRHKPGLPQA--------PQGPSPRP-------PTRYEP 1520
Query: 147 QDRTAALS--PHPQSPLRAPKPPDLRLAPLGQERLQGPWVRGSAGAVRETSAITHI---- 200
Q + LS PH + P GP VRG G R+++ ++
Sbjct: 1521 QRVNSGLSSDPHFEEP--------------------GPMVRGVGGTPRDSAGVSPFPPKR 1560
Query: 201 --AAPWFPQIWYLLLEKEGAVAMPEAAGEVNI--------ARHRASPSELLTPYRW 246
P P+ L +E ++ P ++G + A R + +E LTP+ W
Sbjct: 1561 RERPPRKPE-----LLQEESLPPPHSSGFLGSKPEGPGPQAESRDTGTEALTPHIW 1611
Score = 28.9 bits (63), Expect = 5.8
Identities = 31/117 (26%), Positives = 40/117 (34%), Gaps = 19/117 (16%)
Query: 112 PGLPQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALSPHPQSPLRAPKPPDLRL 171
P P A+ P PP VP P P P P+ P +AP
Sbjct: 508 PAAPPAAPSTPAPPPAVPKELPAPPA-------PPPASAPTPETEPEEPAQAPPAQSTPT 560
Query: 172 APLGQERLQGPWVRGSAGAVRETSAITHIAAPWFPQIWYLLLEKEGAVAMPEAAGEV 228
+ P + G+ TS+ + A+P PQ L KEG PE EV
Sbjct: 561 PGVA----AAPTLVSGGGSTSSTSSGSFEASPVEPQ----LPSKEG----PEPPEEV 605
>gi|19923191 minichromosome maintenance complex component 3 associated
protein [Homo sapiens]
Length = 1980
Score = 36.2 bits (82), Expect = 0.036
Identities = 32/103 (31%), Positives = 45/103 (43%), Gaps = 8/103 (7%)
Query: 103 SLNGGGGHLPGL-PQA--STVHPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALSPHPQS 159
++ GG G G+ P A S++ P PSP P P +L L+ P ++ P P
Sbjct: 1009 TVGGGRGEECGVEPDAPLSSLPQSLPAPAPSPVPLPPVLALTPSVAPSLFQLSVQPEPPP 1068
Query: 160 PLRAPKPPDLRLAPLGQERLQGPWVR-----GSAGAVRETSAI 197
P P D LA + E +Q R GSAGA +A+
Sbjct: 1069 PEPVPMYSDEDLAQVVDELIQEALQRDCEEVGSAGAAYAAAAL 1111
>gi|13876384 cell division cycle associated 3 [Homo sapiens]
Length = 268
Score = 36.2 bits (82), Expect = 0.036
Identities = 34/101 (33%), Positives = 42/101 (41%), Gaps = 17/101 (16%)
Query: 99 QIQSSLNGG---GGHLPGLPQASTVHPKSPP----RVP-----SPHPKPALLTLSLHFKP 146
Q++SS G G L GL A P+SP R P P P + LS F+
Sbjct: 40 QVESSPQPGLPAGEQLEGLKHAQDSDPRSPTLGIARTPMKTSSGDPPSPLVKQLSEVFET 99
Query: 147 QDRTAALSPHPQSPLRAPKPPDLRLAPLGQ----ERLQGPW 183
+D + L P P P AP +L L PLG E PW
Sbjct: 100 EDSKSNLPPEPVLPPEAPLSSELDL-PLGTQLSVEEQMPPW 139
>gi|91208423 thyroid receptor-interacting protein 6 [Homo sapiens]
Length = 476
Score = 35.8 bits (81), Expect = 0.047
Identities = 45/148 (30%), Positives = 53/148 (35%), Gaps = 36/148 (24%)
Query: 97 LTQIQSSLNGGGGHLPGLPQASTVHPKSPP--RVPSPHPKPALLTLSLHFKPQDRTAALS 154
L+ + LNGG GH P P PP R S P PA S
Sbjct: 100 LSSTLAELNGGRGHASRRPDRQAYEPPPPPAYRTGSLKPNPA-----------------S 142
Query: 155 PHPQSPLRAPKPPDLRLA--PLG-----QERLQGPWVRGSAGAVRETS-AITHIAAPWFP 206
P P SP P P A P G Q ++ P VRG R S A + P FP
Sbjct: 143 PLPASPYGGPTPASYTTASTPAGPAFPVQVKVAQP-VRGCGPPRRGASQASGPLPGPHFP 201
Query: 207 -----QIW---YLLLEKEGAVAMPEAAG 226
++W Y + G A EAAG
Sbjct: 202 LPGRGEVWGPGYRSQREPGPGAKEEAAG 229
>gi|39995080 hypothetical protein LOC79567 [Homo sapiens]
Length = 1219
Score = 35.8 bits (81), Expect = 0.047
Identities = 29/89 (32%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Query: 107 GGGHLPGLPQASTVHPKSPPRVP-SPHPKPAL-----LTLSLHFKPQDRTAALSPHPQSP 160
G LP P S + ++ P P +PHP PA LT + +LSP P P
Sbjct: 700 GTDSLPCSPPVSNSYTQADPMAPRTPHPSPAHSSRKPLTSPAPDPSESTVQSLSPTPSPP 759
Query: 161 LRAPKPPDLRLAPLGQERLQGPWVRGSAG 189
AP+ DL LA Q + P G +G
Sbjct: 760 TPAPQHSDLCLAMAVQTPV--PTAAGGSG 786
>gi|239740722 PREDICTED: hypothetical protein [Homo sapiens]
Length = 138
Score = 35.0 bits (79), Expect = 0.081
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 15/119 (12%)
Query: 20 PADLGSLTNLTDEVVRSKLLVSLALLGSEQSEAAGVLYRKLTHLNEGRTGDEFLLPFTMS 79
P G L L ++V ++ LV +A+L + A GV+ H + + D ++L
Sbjct: 35 PVPRGPLGCLVLQLVGTEELVEVAVLHVVSNHAEGVVL----HTHAQQPNDVWVL----E 86
Query: 80 SNHRAFSFHQKQVLCQELTQIQSSLNGGGGHLPGLPQASTVHPKSPPRVPSPHPKPALL 138
H F ++++ E + + GG HLP P HP +PP+ P PA +
Sbjct: 87 PRHDLHLF--QEIIPGEQGEAEEECRVGGLHLPPRP-----HPPAPPQADQASPPPAYM 138
>gi|4758392 forkhead box D1 [Homo sapiens]
Length = 465
Score = 34.7 bits (78), Expect = 0.11
Identities = 31/90 (34%), Positives = 38/90 (42%), Gaps = 8/90 (8%)
Query: 117 ASTVHPKSPPRVPSPHPKPA-LLTLSLHFKPQDRTAAL-SPHPQSPLRAPKPPDLRLA-- 172
A+ HP SPP P PH A L + ++P AAL P P S +A P LA
Sbjct: 301 AAAFHPHSPPPPPPPHGAAAELARTAFGYRPHPLGAALPGPLPASAAKAGGPGASALARS 360
Query: 173 PLGQERLQGPWVRGSAGAVRETSAITHIAA 202
P E + G GS G +A AA
Sbjct: 361 PFSIESIIG----GSLGPAAAAAAAAQAAA 386
>gi|50345997 E1A binding protein p300 [Homo sapiens]
Length = 2414
Score = 34.3 bits (77), Expect = 0.14
Identities = 22/64 (34%), Positives = 27/64 (42%), Gaps = 1/64 (1%)
Query: 110 HLPGLPQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALSPHPQSPLRAPKPPDL 169
H P LPQ + +H SP VPS P P S+ + T +P P P P P
Sbjct: 818 HCPQLPQPA-LHQNSPSPVPSRTPTPHHTPPSIGAQQPPATTIPAPVPTPPAMPPGPQSQ 876
Query: 170 RLAP 173
L P
Sbjct: 877 ALHP 880
Score = 34.3 bits (77), Expect = 0.14
Identities = 23/79 (29%), Positives = 35/79 (44%), Gaps = 8/79 (10%)
Query: 117 ASTVHPKSPPRV---PSPHPKPALLTLSLHFKPQDRTAALSPHP---QSPLRAPKPPDLR 170
A V P +PP+ P P P PA + +++ + T H Q P++ PP
Sbjct: 1902 AGQVTPPTPPQTAQPPLPGPPPAAVEMAMQIQRAAETQRQMAHVQIFQRPIQHQMPPMTP 1961
Query: 171 LAPLGQERLQGPWVRGSAG 189
+AP+G P RG +G
Sbjct: 1962 MAPMGMN--PPPMTRGPSG 1978
Score = 28.9 bits (63), Expect = 5.8
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 16/70 (22%)
Query: 111 LPGLPQASTVHPKSPPR-VPSP-------HPKPALLTLSLHFKPQDR------TAALSPH 156
+P PQ+ +HP PPR P+P +P+L +PQ + TAA P
Sbjct: 869 MPPGPQSQALHP--PPRQTPTPPTTQLPQQVQPSLPAAPSADQPQQQPRSQQSTAASVPT 926
Query: 157 PQSPLRAPKP 166
P +PL P+P
Sbjct: 927 PTAPLLPPQP 936
Score = 28.9 bits (63), Expect = 5.8
Identities = 19/55 (34%), Positives = 27/55 (49%), Gaps = 4/55 (7%)
Query: 110 HLPG--LPQASTVHPKSPPRVPSPHP--KPALLTLSLHFKPQDRTAALSPHPQSP 160
HL G +P + + +SP VPSP P +P + S +PQ +SP SP
Sbjct: 2293 HLQGQQIPNSLSNQVRSPQPVPSPRPQSQPPHSSPSPRMQPQPSPHHVSPQTSSP 2347
>gi|169207312 PREDICTED: hypothetical protein [Homo sapiens]
Length = 414
Score = 34.3 bits (77), Expect = 0.14
Identities = 28/95 (29%), Positives = 37/95 (38%), Gaps = 12/95 (12%)
Query: 107 GGGHLPGLPQASTVHPK-------SPPRVPSPHPKPALLTLSLHFKPQDRTAALSPH--- 156
G PG P + K SPPR P P P A +T L + + +A P
Sbjct: 126 GLSQAPGRPLGACARAKGIRLVNPSPPRPPEPIPASAAVTSGLTARGPNTSATPGPQKGR 185
Query: 157 --PQSPLRAPKPPDLRLAPLGQERLQGPWVRGSAG 189
+ PK AP ER + P+ RGS+G
Sbjct: 186 GSAERTNHIPKDKQRVAAPPPPERPRVPFCRGSSG 220
>gi|239750650 PREDICTED: hypothetical protein [Homo sapiens]
Length = 414
Score = 34.3 bits (77), Expect = 0.14
Identities = 28/95 (29%), Positives = 37/95 (38%), Gaps = 12/95 (12%)
Query: 107 GGGHLPGLPQASTVHPK-------SPPRVPSPHPKPALLTLSLHFKPQDRTAALSPH--- 156
G PG P + K SPPR P P P A +T L + + +A P
Sbjct: 126 GLSQAPGRPLGACARAKGIRLVNPSPPRPPEPIPASAAVTSGLTARGPNTSATPGPQKGR 185
Query: 157 --PQSPLRAPKPPDLRLAPLGQERLQGPWVRGSAG 189
+ PK AP ER + P+ RGS+G
Sbjct: 186 GSAERTNHIPKDKQRVAAPPPPERPRVPFCRGSSG 220
>gi|89037350 PREDICTED: hypothetical protein [Homo sapiens]
Length = 414
Score = 34.3 bits (77), Expect = 0.14
Identities = 28/95 (29%), Positives = 37/95 (38%), Gaps = 12/95 (12%)
Query: 107 GGGHLPGLPQASTVHPK-------SPPRVPSPHPKPALLTLSLHFKPQDRTAALSPH--- 156
G PG P + K SPPR P P P A +T L + + +A P
Sbjct: 126 GLSQAPGRPLGACARAKGIRLVNPSPPRPPEPIPASAAVTSGLTARGPNTSATPGPQKGR 185
Query: 157 --PQSPLRAPKPPDLRLAPLGQERLQGPWVRGSAG 189
+ PK AP ER + P+ RGS+G
Sbjct: 186 GSAERTNHIPKDKQRVAAPPPPERPRVPFCRGSSG 220
>gi|189181750 human immunodeficiency virus type I enhancer binding
protein 3 b [Homo sapiens]
Length = 2405
Score = 34.3 bits (77), Expect = 0.14
Identities = 27/69 (39%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Query: 107 GGGHLPGLPQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQDRTAA--LSPHPQSPLRAP 164
GGG PG P T H P P+P P +L PQ R AA SP +SP RAP
Sbjct: 2281 GGG--PGRPPDWTPHGTGAPAEPTPTHSPCTPPDTLPRPPQGRRAAQSWSPRLESP-RAP 2337
Query: 165 KPPDLRLAP 173
P+ P
Sbjct: 2338 TNPEPSATP 2346
Score = 28.5 bits (62), Expect = 7.6
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Query: 119 TVHPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALSPHPQSPLRAPKPPDLRLAPLGQ 176
T P P P P PK T + + +T A P + P PK LRLA + Q
Sbjct: 861 TEEPDRPDTEPEPPPKEPEKTEEFQWPQRSQTLAQLPAEKLP---PKKKRLRLAEMAQ 915
>gi|116089331 human immunodeficiency virus type I enhancer binding
protein 3 [Homo sapiens]
Length = 2406
Score = 34.3 bits (77), Expect = 0.14
Identities = 27/69 (39%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Query: 107 GGGHLPGLPQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQDRTAA--LSPHPQSPLRAP 164
GGG PG P T H P P+P P +L PQ R AA SP +SP RAP
Sbjct: 2282 GGG--PGRPPDWTPHGTGAPAEPTPTHSPCTPPDTLPRPPQGRRAAQSWSPRLESP-RAP 2338
Query: 165 KPPDLRLAP 173
P+ P
Sbjct: 2339 TNPEPSATP 2347
Score = 28.5 bits (62), Expect = 7.6
Identities = 19/58 (32%), Positives = 24/58 (41%), Gaps = 3/58 (5%)
Query: 119 TVHPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALSPHPQSPLRAPKPPDLRLAPLGQ 176
T P P P P PK T + + +T A P + P PK LRLA + Q
Sbjct: 861 TEEPDRPDTEPEPPPKEPEKTEEFQWPQRSQTLAQLPAEKLP---PKKKRLRLAEMAQ 915
>gi|153792074 proline rich 12 [Homo sapiens]
Length = 2036
Score = 34.3 bits (77), Expect = 0.14
Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 16/100 (16%)
Query: 87 FHQKQVLCQELTQIQSSLNGGGGHLPGLPQASTVHPKSPPRVPSPHPKPALLTLSLHFKP 146
+H+ V + Q ++ ++ GG P PP+ P+P PKP + KP
Sbjct: 1667 WHRPPVPVRRSGQAKNPVSAGGSSAP------------PPKAPAPPPKPETPEKTTSEKP 1714
Query: 147 QDRTAALSPHPQSPLRAPKPPDLRLAPLGQERLQGPWVRG 186
++T + P+ P AP+ P L L P+ +E+ + RG
Sbjct: 1715 PEQTPE-TAMPEPP--APEKPSL-LRPVEKEKEKEKVTRG 1750
Score = 31.6 bits (70), Expect = 0.89
Identities = 24/67 (35%), Positives = 28/67 (41%), Gaps = 6/67 (8%)
Query: 112 PGLPQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALSPHPQSPLRA----PKPP 167
P P A T P+ PP P P P+PAL + P + P P P A P PP
Sbjct: 1459 PTPPPAPTPQPQPPP--PPPPPQPALPSPPPLVAPTPSSPPPPPLPPPPPPAMPSPPPPP 1516
Query: 168 DLRLAPL 174
APL
Sbjct: 1517 PPAAAPL 1523
Score = 31.2 bits (69), Expect = 1.2
Identities = 16/53 (30%), Positives = 21/53 (39%)
Query: 112 PGLPQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALSPHPQSPLRAP 164
P P + P PP +PSP P P L P++ A P+ P P
Sbjct: 1493 PSSPPPPPLPPPPPPAMPSPPPPPPPAAAPLAAPPEEPAAPSPEDPELPDTRP 1545
Score = 30.8 bits (68), Expect = 1.5
Identities = 22/61 (36%), Positives = 25/61 (40%), Gaps = 2/61 (3%)
Query: 111 LPGLPQASTVHPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALSPHPQSPLRAPKPPDLR 170
LP P P SPP P P P P + S P A L+ P+ P AP P D
Sbjct: 1482 LPSPPPLVAPTPSSPPPPPLPPPPPPAMP-SPPPPPPPAAAPLAAPPEEP-AAPSPEDPE 1539
Query: 171 L 171
L
Sbjct: 1540 L 1540
Score = 30.0 bits (66), Expect = 2.6
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 11/68 (16%)
Query: 111 LPGLPQAST-----------VHPKSPPRVPSPHPKPALLTLSLHFKPQDRTAALSPHPQS 159
LPGLP A++ P +PP P+P P+P ++P P S
Sbjct: 1436 LPGLPSANSNGTPEPPLLEEKPPPTPPPAPTPQPQPPPPPPPPQPALPSPPPLVAPTPSS 1495
Query: 160 PLRAPKPP 167
P P PP
Sbjct: 1496 PPPPPLPP 1503
>gi|222831660 family with sequence similarity 171, member A2 [Homo
sapiens]
Length = 826
Score = 33.9 bits (76), Expect = 0.18
Identities = 28/81 (34%), Positives = 36/81 (44%), Gaps = 8/81 (9%)
Query: 123 KSPPRVPSPHPKPALLTLSLHFKP---QDRTAALSPHPQS---PLRAPKPPDLRLA--PL 174
++PP P P P P L LS +P + RT SP S L P+ R A P
Sbjct: 709 RAPPAAPPPPPAPPRLALSEDTEPSSSESRTGLCSPEDNSLTPLLDEVAAPEGRAATVPR 768
Query: 175 GQERLQGPWVRGSAGAVRETS 195
G+ R +G R SA +R S
Sbjct: 769 GRGRSRGDSSRSSASELRRDS 789
>gi|19923901 hypothetical protein LOC91523 [Homo sapiens]
Length = 432
Score = 33.9 bits (76), Expect = 0.18
Identities = 29/78 (37%), Positives = 35/78 (44%), Gaps = 15/78 (19%)
Query: 108 GGHLPGLPQASTVHPKSP--PRVPSPHPKPALLTLSLHFKPQDRTAALSPHPQSPLRAPK 165
G + G PQA+ HP P P +PSP +P L F PQ P PL +P+
Sbjct: 272 GPRVEGPPQANRNHPALPLSPPLPSPTYRPL-----LGFPPQRL-------PLLPLLSPQ 319
Query: 166 PPDLRLAPLGQERL-QGP 182
PP L G R QGP
Sbjct: 320 PPPPILHHQGMPRFPQGP 337
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.134 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,316,277
Number of Sequences: 37866
Number of extensions: 719040
Number of successful extensions: 5077
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 261
Number of HSP's that attempted gapping in prelim test: 4469
Number of HSP's gapped (non-prelim): 787
length of query: 300
length of database: 18,247,518
effective HSP length: 102
effective length of query: 198
effective length of database: 14,385,186
effective search space: 2848266828
effective search space used: 2848266828
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.