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Search of human proteins with 169217711
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169217711 PREDICTED: similar to Ovostatin homolog 2 [Homo
sapiens]
(278 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169217711 PREDICTED: similar to Ovostatin homolog 2 [Homo sap... 563 e-161
gi|239750255 PREDICTED: similar to ovostatin-2 [Homo sapiens] 405 e-113
gi|239744583 PREDICTED: ovostatin 2 [Homo sapiens] 392 e-109
gi|169204289 PREDICTED: ovostatin [Homo sapiens] 391 e-109
gi|66932947 alpha-2-macroglobulin precursor [Homo sapiens] 148 6e-36
gi|162809334 pregnancy-zone protein [Homo sapiens] 145 4e-35
gi|74271845 alpha-2-macroglobulin-like 1 [Homo sapiens] 110 1e-24
gi|227430303 CD109 antigen isoform 3 precursor [Homo sapiens] 87 1e-17
gi|227430301 CD109 antigen isoform 2 precursor [Homo sapiens] 87 1e-17
gi|115529484 CD109 antigen isoform 1 precursor [Homo sapiens] 87 1e-17
gi|118600977 C3 and PZP-like, alpha-2-macroglobulin domain conta... 79 4e-15
gi|115298678 complement component 3 precursor [Homo sapiens] 67 2e-11
gi|169218213 PREDICTED: similar to complement component C3, part... 67 2e-11
gi|38016947 complement component 5 preproprotein [Homo sapiens] 64 1e-10
gi|67190748 complement component 4A preproprotein [Homo sapiens] 57 2e-08
gi|178557739 complement component 4B preproprotein [Homo sapiens] 57 2e-08
gi|239740686 PREDICTED: similar to C4A protein isoform 2 [Homo s... 57 2e-08
gi|239740684 PREDICTED: similar to C4A protein isoform 1 [Homo s... 57 2e-08
gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2 ... 32 0.80
gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1 ... 32 0.80
gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3 ... 32 0.80
gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo sap... 31 1.0
gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo sap... 31 1.0
gi|13699811 WHSC1L1 protein isoform long [Homo sapiens] 30 2.3
gi|13699813 WHSC1L1 protein isoform short [Homo sapiens] 30 2.3
gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Ho... 30 3.0
gi|32307126 nuclear receptor coactivator 3 isoform a [Homo sapiens] 29 4.0
gi|32307124 nuclear receptor coactivator 3 isoform b [Homo sapiens] 29 4.0
gi|160707881 formin 2 [Homo sapiens] 29 4.0
gi|119226260 calcium homeostasis endoplasmic reticulum protein [... 29 4.0
>gi|169217711 PREDICTED: similar to Ovostatin homolog 2 [Homo
sapiens]
Length = 278
Score = 563 bits (1451), Expect = e-161
Identities = 278/278 (100%), Positives = 278/278 (100%)
Query: 1 MGLKVFTNLHYRKPEVCVMERRLPLPKPLYLETENYGPMRSVPSRIASSGIRGENADYVE 60
MGLKVFTNLHYRKPEVCVMERRLPLPKPLYLETENYGPMRSVPSRIASSGIRGENADYVE
Sbjct: 1 MGLKVFTNLHYRKPEVCVMERRLPLPKPLYLETENYGPMRSVPSRIASSGIRGENADYVE 60
Query: 61 QAIIQTVRTNFPETWMWDLVSVDSSGSANLSFLIPDTITQWEASGFCVNGDVGFGISSTT 120
QAIIQTVRTNFPETWMWDLVSVDSSGSANLSFLIPDTITQWEASGFCVNGDVGFGISSTT
Sbjct: 61 QAIIQTVRTNFPETWMWDLVSVDSSGSANLSFLIPDTITQWEASGFCVNGDVGFGISSTT 120
Query: 121 TLEVSQPFFIEIASPFSVVQNEQFDLIVNVFSYRNTCVEISVQVEESQNYEANINTWKIN 180
TLEVSQPFFIEIASPFSVVQNEQFDLIVNVFSYRNTCVEISVQVEESQNYEANINTWKIN
Sbjct: 121 TLEVSQPFFIEIASPFSVVQNEQFDLIVNVFSYRNTCVEISVQVEESQNYEANINTWKIN 180
Query: 181 GSEVIQAGGRKTNIWTIIPKKLDLKFLNISTAQDLQNPTLAIETEYCTNLYSFMTLSRRH 240
GSEVIQAGGRKTNIWTIIPKKLDLKFLNISTAQDLQNPTLAIETEYCTNLYSFMTLSRRH
Sbjct: 181 GSEVIQAGGRKTNIWTIIPKKLDLKFLNISTAQDLQNPTLAIETEYCTNLYSFMTLSRRH 240
Query: 241 SFKSEIASFLRQRNTKTQQQQQQQKEQYIGYVYWYIVT 278
SFKSEIASFLRQRNTKTQQQQQQQKEQYIGYVYWYIVT
Sbjct: 241 SFKSEIASFLRQRNTKTQQQQQQQKEQYIGYVYWYIVT 278
>gi|239750255 PREDICTED: similar to ovostatin-2 [Homo sapiens]
Length = 750
Score = 405 bits (1040), Expect = e-113
Identities = 199/202 (98%), Positives = 199/202 (98%)
Query: 1 MGLKVFTNLHYRKPEVCVMERRLPLPKPLYLETENYGPMRSVPSRIASSGIRGENADYVE 60
MGLKVFTNLHYRKPEVCVMERRLPLPKPLYLETENYGPM SVPSRIASSGIRGENADYVE
Sbjct: 296 MGLKVFTNLHYRKPEVCVMERRLPLPKPLYLETENYGPMHSVPSRIASSGIRGENADYVE 355
Query: 61 QAIIQTVRTNFPETWMWDLVSVDSSGSANLSFLIPDTITQWEASGFCVNGDVGFGISSTT 120
QAIIQTVRTNFPETWMWDLVSVDSSGSANLSFLIPDTITQWEASGFCVNGDVGFGISSTT
Sbjct: 356 QAIIQTVRTNFPETWMWDLVSVDSSGSANLSFLIPDTITQWEASGFCVNGDVGFGISSTT 415
Query: 121 TLEVSQPFFIEIASPFSVVQNEQFDLIVNVFSYRNTCVEISVQVEESQNYEANINTWKIN 180
TLEVSQPFFIEIASPFSVVQNEQFDLIVN FSY NTCVEISVQVEESQNYEANINTWKIN
Sbjct: 416 TLEVSQPFFIEIASPFSVVQNEQFDLIVNAFSYLNTCVEISVQVEESQNYEANINTWKIN 475
Query: 181 GSEVIQAGGRKTNIWTIIPKKL 202
GSEVIQAGGRKTNIWTIIPKKL
Sbjct: 476 GSEVIQAGGRKTNIWTIIPKKL 497
>gi|239744583 PREDICTED: ovostatin 2 [Homo sapiens]
Length = 1394
Score = 392 bits (1007), Expect = e-109
Identities = 195/202 (96%), Positives = 195/202 (96%), Gaps = 3/202 (1%)
Query: 1 MGLKVFTNLHYRKPEVCVMERRLPLPKPLYLETENYGPMRSVPSRIASSGIRGENADYVE 60
MGLKVFTNLHYRKPEVCVMERRLPLPKPLYLETENYGPM SVPSRIA RGENADYVE
Sbjct: 656 MGLKVFTNLHYRKPEVCVMERRLPLPKPLYLETENYGPMHSVPSRIAC---RGENADYVE 712
Query: 61 QAIIQTVRTNFPETWMWDLVSVDSSGSANLSFLIPDTITQWEASGFCVNGDVGFGISSTT 120
QAIIQTVRTNFPETWMWDLVSVDSSGSANLSFLIPDTITQWEASGFCVNGDVGFGISSTT
Sbjct: 713 QAIIQTVRTNFPETWMWDLVSVDSSGSANLSFLIPDTITQWEASGFCVNGDVGFGISSTT 772
Query: 121 TLEVSQPFFIEIASPFSVVQNEQFDLIVNVFSYRNTCVEISVQVEESQNYEANINTWKIN 180
TLEVSQPFFIEIASPFSVVQNEQFDLIVN FSY NTCVEISVQVEESQNYEANINTWKIN
Sbjct: 773 TLEVSQPFFIEIASPFSVVQNEQFDLIVNAFSYLNTCVEISVQVEESQNYEANINTWKIN 832
Query: 181 GSEVIQAGGRKTNIWTIIPKKL 202
GSEVIQAGGRKTNIWTIIPKKL
Sbjct: 833 GSEVIQAGGRKTNIWTIIPKKL 854
>gi|169204289 PREDICTED: ovostatin [Homo sapiens]
Length = 1353
Score = 391 bits (1004), Expect = e-109
Identities = 195/202 (96%), Positives = 197/202 (97%), Gaps = 3/202 (1%)
Query: 1 MGLKVFTNLHYRKPEVCVMERRLPLPKPLYLETENYGPMRSVPSRIASSGIRGENADYVE 60
MGLKVFTNLHYRKPEVCVMERRLPLPKPLYLETENYGPMRSVPSRIA RGENADYVE
Sbjct: 607 MGLKVFTNLHYRKPEVCVMERRLPLPKPLYLETENYGPMRSVPSRIAC---RGENADYVE 663
Query: 61 QAIIQTVRTNFPETWMWDLVSVDSSGSANLSFLIPDTITQWEASGFCVNGDVGFGISSTT 120
QAIIQTVRTNFPETWMWDLVSVDSSGSANLSFLIPDTITQWEASGFCVNGDVGFGISSTT
Sbjct: 664 QAIIQTVRTNFPETWMWDLVSVDSSGSANLSFLIPDTITQWEASGFCVNGDVGFGISSTT 723
Query: 121 TLEVSQPFFIEIASPFSVVQNEQFDLIVNVFSYRNTCVEISVQVEESQNYEANINTWKIN 180
TLEVSQPFFIEIASPFSVVQNEQFDLIVNVFSYRNTCVEISVQVEESQNYEANI+T KIN
Sbjct: 724 TLEVSQPFFIEIASPFSVVQNEQFDLIVNVFSYRNTCVEISVQVEESQNYEANIHTLKIN 783
Query: 181 GSEVIQAGGRKTNIWTIIPKKL 202
GSEVIQAGGRKTN+WTIIPKKL
Sbjct: 784 GSEVIQAGGRKTNVWTIIPKKL 805
>gi|66932947 alpha-2-macroglobulin precursor [Homo sapiens]
Length = 1474
Score = 148 bits (373), Expect = 6e-36
Identities = 82/205 (40%), Positives = 114/205 (55%), Gaps = 15/205 (7%)
Query: 1 MGLKVFTNLHYRKPEVCVMERRLPLPKPLYLETENYGPMRSVPSRIASSGIRGENAD--- 57
MGLK FTN RKP++C P + E +GP + S + G
Sbjct: 673 MGLKAFTNSKIRKPKMC----------PQLQQYEMHGP-EGLRVGFYESDVMGRGHARLV 721
Query: 58 YVEQAIIQTVRTNFPETWMWDLVSVDSSGSANLSFLIPDTITQWEASGFCVNGDVGFGIS 117
+VE+ +TVR FPETW+WDLV V+S+G A + +PDTIT+W+A FC++ D G GIS
Sbjct: 722 HVEEPHTETVRKYFPETWIWDLVVVNSAGVAEVGVTVPDTITEWKAGAFCLSEDAGLGIS 781
Query: 118 STTTLEVSQPFFIEIASPFSVVQNEQFDLIVNVFSYRNTCVEISVQVEESQNYEANINTW 177
ST +L QPFF+E+ P+SV++ E F L V +Y C+ +SVQ+E S + A +
Sbjct: 782 STASLRAFQPFFVELTMPYSVIRGEAFTLKATVLNYLPKCIRVSVQLEASPAFLA-VPVE 840
Query: 178 KINGSEVIQAGGRKTNIWTIIPKKL 202
K I A GR+T W + PK L
Sbjct: 841 KEQAPHCICANGRQTVSWAVTPKSL 865
>gi|162809334 pregnancy-zone protein [Homo sapiens]
Length = 1482
Score = 145 bits (366), Expect = 4e-35
Identities = 82/207 (39%), Positives = 118/207 (57%), Gaps = 9/207 (4%)
Query: 1 MGLKVFTNLHYRKPEVCVMERRLPLPKPLYLETENYGPMRSVPSR-----IASSGIRGEN 55
MGLKVFTN RKP+ C + +P + YG V R + + + N
Sbjct: 669 MGLKVFTNSKIRKPKSCSV---IPSVSAGAVGQGYYGAGLGVVERPYVPQLGTYNVIPLN 725
Query: 56 ADYVEQAIIQTVRTNFPETWMWDLVSVDSSGSANLSFLIPDTITQWEASGFCVNGDVGFG 115
+ + +TVR+ FPETW+W+LV+V+SSG A + +PDTIT+W+A FC++ D G G
Sbjct: 726 NEQSSGPVPETVRSYFPETWIWELVAVNSSGVAEVGVTVPDTITEWKAGAFCLSEDAGLG 785
Query: 116 ISSTTTLEVSQPFFIEIASPFSVVQNEQFDLIVNVFSYRNTCVEISVQVEESQNYEANIN 175
ISST +L QPFF+E+ P+SV++ E F L V +Y C+ +SVQ++ S + A+ N
Sbjct: 786 ISSTASLRAFQPFFVELTMPYSVIRGEVFTLKATVLNYLPKCIRVSVQLKASPAFLASQN 845
Query: 176 TWKINGSEVIQAGGRKTNIWTIIPKKL 202
T K S I R+T WT+ PK L
Sbjct: 846 T-KGEESYCICGNERQTLSWTVTPKTL 871
>gi|74271845 alpha-2-macroglobulin-like 1 [Homo sapiens]
Length = 1454
Score = 110 bits (275), Expect = 1e-24
Identities = 66/212 (31%), Positives = 99/212 (46%), Gaps = 18/212 (8%)
Query: 1 MGLKVFTNLHYRKPEVCVMERRLPLPKPLYLETENYGPMRSVPSRIASSGIRGENADYVE 60
+GLK+ +N +KP C P Y G E++ +
Sbjct: 678 VGLKILSNAKIKKPVDCSHR------SPEYSTAMGAG---------GGHPEAFESSTPLH 722
Query: 61 QAIIQTVRTNFPETWMWDLVSVDSSGSANLSFLIPDTITQWEASGFCVNGDVGFGISSTT 120
QA VR FPETW+WDL + +SG + +PD IT+W+A FC + GFG+S T
Sbjct: 723 QAEDSQVRQYFPETWLWDLFPIGNSGKEAVHVTVPDAITEWKAMSFCTSQSRGFGLSPTV 782
Query: 121 TLEVSQPFFIEIASPFSVVQNEQFDLIVNVFSYRNTCVEISVQVEESQNYEANINTW-KI 179
L +PFF+++ P+SVV+ E F L +F+Y C+ + + +S Y+ + +W
Sbjct: 783 GLTAFKPFFVDLTLPYSVVRGESFRLTATIFNYLKDCIRVQTDLAKSHEYQ--LESWADS 840
Query: 180 NGSEVIQAGGRKTNIWTIIPKKLDLKFLNIST 211
S + A KT+ W I KL IST
Sbjct: 841 QTSSCLCADEAKTHHWNITAVKLGHINFTIST 872
>gi|227430303 CD109 antigen isoform 3 precursor [Homo sapiens]
Length = 1368
Score = 87.4 bits (215), Expect = 1e-17
Identities = 40/117 (34%), Positives = 71/117 (60%), Gaps = 1/117 (0%)
Query: 67 VRTNFPETWMWDLVSVDSSGSANLSFLIPDTITQWEASGFCVNGDVGFGISSTTT-LEVS 125
VR +FPETW+W ++ +PD+IT W A+GF ++ D+G G+++T L+
Sbjct: 609 VRKHFPETWIWLDTNMGYRIYQEFEVTVPDSITSWVATGFVISEDLGLGLTTTPVELQAF 668
Query: 126 QPFFIEIASPFSVVQNEQFDLIVNVFSYRNTCVEISVQVEESQNYEANINTWKINGS 182
QPFFI + P+SV++ E+F L + +F+Y E+ V +E+S ++ + + +IN +
Sbjct: 669 QPFFIFLNLPYSVIRGEEFALEITIFNYLKDATEVKVIIEKSDKFDILMTSNEINAT 725
>gi|227430301 CD109 antigen isoform 2 precursor [Homo sapiens]
Length = 1428
Score = 87.4 bits (215), Expect = 1e-17
Identities = 40/117 (34%), Positives = 71/117 (60%), Gaps = 1/117 (0%)
Query: 67 VRTNFPETWMWDLVSVDSSGSANLSFLIPDTITQWEASGFCVNGDVGFGISSTTT-LEVS 125
VR +FPETW+W ++ +PD+IT W A+GF ++ D+G G+++T L+
Sbjct: 686 VRKHFPETWIWLDTNMGYRIYQEFEVTVPDSITSWVATGFVISEDLGLGLTTTPVELQAF 745
Query: 126 QPFFIEIASPFSVVQNEQFDLIVNVFSYRNTCVEISVQVEESQNYEANINTWKINGS 182
QPFFI + P+SV++ E+F L + +F+Y E+ V +E+S ++ + + +IN +
Sbjct: 746 QPFFIFLNLPYSVIRGEEFALEITIFNYLKDATEVKVIIEKSDKFDILMTSNEINAT 802
>gi|115529484 CD109 antigen isoform 1 precursor [Homo sapiens]
Length = 1445
Score = 87.4 bits (215), Expect = 1e-17
Identities = 40/117 (34%), Positives = 71/117 (60%), Gaps = 1/117 (0%)
Query: 67 VRTNFPETWMWDLVSVDSSGSANLSFLIPDTITQWEASGFCVNGDVGFGISSTTT-LEVS 125
VR +FPETW+W ++ +PD+IT W A+GF ++ D+G G+++T L+
Sbjct: 686 VRKHFPETWIWLDTNMGYRIYQEFEVTVPDSITSWVATGFVISEDLGLGLTTTPVELQAF 745
Query: 126 QPFFIEIASPFSVVQNEQFDLIVNVFSYRNTCVEISVQVEESQNYEANINTWKINGS 182
QPFFI + P+SV++ E+F L + +F+Y E+ V +E+S ++ + + +IN +
Sbjct: 746 QPFFIFLNLPYSVIRGEEFALEITIFNYLKDATEVKVIIEKSDKFDILMTSNEINAT 802
>gi|118600977 C3 and PZP-like, alpha-2-macroglobulin domain
containing 8 [Homo sapiens]
Length = 1932
Score = 79.0 bits (193), Expect = 4e-15
Identities = 33/98 (33%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
Query: 68 RTNFPETWMWDLVSV-DSSGSANLSFLIPDTITQWEASGFCVNGDVGFGISSTTTLEVSQ 126
RT FPETW+W +++ D SG LS +PD+IT W ++ G GI+ + L+ +
Sbjct: 791 RTFFPETWIWHCLNISDPSGEGTLSVKVPDSITSWVGEAVALSTSQGLGIAEPSLLKTFK 850
Query: 127 PFFIEIASPFSVVQNEQFDLIVNVFSYRNTCVEISVQV 164
PFF++ P +++ EQ + ++V++Y TC E+ +++
Sbjct: 851 PFFVDFMLPALIIRGEQVKIPLSVYNYMGTCAEVYMKL 888
>gi|115298678 complement component 3 precursor [Homo sapiens]
Length = 1663
Score = 66.6 bits (161), Expect = 2e-11
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 12/152 (7%)
Query: 27 KPLYLETENY-GPMRSVPSRIASSGIRGENAD---YVEQAIIQTVRTNFPETWMW---DL 79
K ++L+ NY +R +R + G+ N D E+ I+ R+ FPE+W+W DL
Sbjct: 721 KKVFLDCCNYITELRRQHARASHLGLARSNLDEDIIAEENIVS--RSEFPESWLWNVEDL 778
Query: 80 VSVDSSGSAN--LSFLIPDTITQWEASGFCVNGDVGFGISSTTTLEVSQPFFIEIASPFS 137
+G + ++ + D+IT WE ++ G ++ + V Q FFI++ P+S
Sbjct: 779 KEPPKNGISTKLMNIFLKDSITTWEILAVSMSDKKGICVADPFEVTVMQDFFIDLRLPYS 838
Query: 138 VVQNEQFDLIVNVFSYRNTCVEISVQVEESQN 169
VV+NEQ ++ +++YR E+ V+VE N
Sbjct: 839 VVRNEQVEIRAVLYNYRQN-QELKVRVELLHN 869
>gi|169218213 PREDICTED: similar to complement component C3, partial
[Homo sapiens]
Length = 1295
Score = 66.6 bits (161), Expect = 2e-11
Identities = 45/152 (29%), Positives = 79/152 (51%), Gaps = 12/152 (7%)
Query: 27 KPLYLETENY-GPMRSVPSRIASSGIRGENAD---YVEQAIIQTVRTNFPETWMW---DL 79
K ++L+ NY +R +R + G+ N D E+ I+ R+ FPE+W+W DL
Sbjct: 721 KKVFLDCCNYITELRRQHARASHLGLARSNLDEDIIAEENIVS--RSEFPESWLWNVEDL 778
Query: 80 VSVDSSGSAN--LSFLIPDTITQWEASGFCVNGDVGFGISSTTTLEVSQPFFIEIASPFS 137
+G + ++ + D+IT WE ++ G ++ + V Q FFI++ P+S
Sbjct: 779 KEPPKNGISTKLMNIFLKDSITTWEILAVSMSDKKGICVADPFEVTVMQDFFIDLRLPYS 838
Query: 138 VVQNEQFDLIVNVFSYRNTCVEISVQVEESQN 169
VV+NEQ ++ +++YR E+ V+VE N
Sbjct: 839 VVRNEQVEIRAVLYNYRQN-QELKVRVELLHN 869
>gi|38016947 complement component 5 preproprotein [Homo sapiens]
Length = 1676
Score = 64.3 bits (155), Expect = 1e-10
Identities = 31/98 (31%), Positives = 58/98 (59%), Gaps = 3/98 (3%)
Query: 67 VRTNFPETWMWDLVSVDSSGSANLSFLIPDTITQWEASGFCVNGDVGFGISSTTTLEVSQ 126
+R+ FPE+W+W++ V L F +PD++T WE G ++ + G ++ T +V +
Sbjct: 765 IRSYFPESWLWEVHLVPRR--KQLQFALPDSLTTWEIQGVGIS-NTGICVADTVKAKVFK 821
Query: 127 PFFIEIASPFSVVQNEQFDLIVNVFSYRNTCVEISVQV 164
F+E+ P+SVV+ EQ L V++YR + ++ V++
Sbjct: 822 DVFLEMNIPYSVVRGEQIQLKGTVYNYRTSGMQFCVKM 859
>gi|67190748 complement component 4A preproprotein [Homo sapiens]
Length = 1744
Score = 57.0 bits (136), Expect = 2e-08
Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 67 VRTNFPETWMWDLVSVDSSGSANLSFLIPDTITQWEASGFCVNGDVGFGISSTTTLEVSQ 126
VR+ FPE W+W + +VD L+ +PD++T WE G ++ G +++ L V +
Sbjct: 774 VRSFFPENWLWRVETVDRFQI--LTLWLPDSLTTWEIHGLSLSKTKGLCVATPVQLRVFR 831
Query: 127 PFFIEIASPFSVVQNEQFDLIVNVFSYRNTCVEISVQV 164
F + + P SV + EQ +L +++Y + + +SV V
Sbjct: 832 EFHLHLRLPMSVRRFEQLELRPVLYNYLDKNLTVSVHV 869
>gi|178557739 complement component 4B preproprotein [Homo sapiens]
Length = 1744
Score = 57.0 bits (136), Expect = 2e-08
Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 67 VRTNFPETWMWDLVSVDSSGSANLSFLIPDTITQWEASGFCVNGDVGFGISSTTTLEVSQ 126
VR+ FPE W+W + +VD L+ +PD++T WE G ++ G +++ L V +
Sbjct: 774 VRSFFPENWLWRVETVDRFQI--LTLWLPDSLTTWEIHGLSLSKTKGLCVATPVQLRVFR 831
Query: 127 PFFIEIASPFSVVQNEQFDLIVNVFSYRNTCVEISVQV 164
F + + P SV + EQ +L +++Y + + +SV V
Sbjct: 832 EFHLHLRLPMSVRRFEQLELRPVLYNYLDKNLTVSVHV 869
>gi|239740686 PREDICTED: similar to C4A protein isoform 2 [Homo
sapiens]
Length = 1698
Score = 57.0 bits (136), Expect = 2e-08
Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 67 VRTNFPETWMWDLVSVDSSGSANLSFLIPDTITQWEASGFCVNGDVGFGISSTTTLEVSQ 126
VR+ FPE W+W + +VD L+ +PD++T WE G ++ G +++ L V +
Sbjct: 774 VRSFFPENWLWRVETVDRFQI--LTLWLPDSLTTWEIHGLSLSKTKGLCVATPVQLRVFR 831
Query: 127 PFFIEIASPFSVVQNEQFDLIVNVFSYRNTCVEISVQV 164
F + + P SV + EQ +L +++Y + + +SV V
Sbjct: 832 EFHLHLRLPMSVRRFEQLELRPVLYNYLDKNLTVSVHV 869
>gi|239740684 PREDICTED: similar to C4A protein isoform 1 [Homo
sapiens]
Length = 1744
Score = 57.0 bits (136), Expect = 2e-08
Identities = 30/98 (30%), Positives = 54/98 (55%), Gaps = 2/98 (2%)
Query: 67 VRTNFPETWMWDLVSVDSSGSANLSFLIPDTITQWEASGFCVNGDVGFGISSTTTLEVSQ 126
VR+ FPE W+W + +VD L+ +PD++T WE G ++ G +++ L V +
Sbjct: 774 VRSFFPENWLWRVETVDRFQI--LTLWLPDSLTTWEIHGLSLSKTKGLCVATPVQLRVFR 831
Query: 127 PFFIEIASPFSVVQNEQFDLIVNVFSYRNTCVEISVQV 164
F + + P SV + EQ +L +++Y + + +SV V
Sbjct: 832 EFHLHLRLPMSVRRFEQLELRPVLYNYLDKNLTVSVHV 869
>gi|40068464 AT rich interactive domain 1B (SWI1-like) isoform 2
[Homo sapiens]
Length = 2191
Score = 31.6 bits (70), Expect = 0.80
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 236 LSRRHSFKSEIASFLRQRNTKTQQQQQQQKEQY 268
L H+ + ++ F +Q+ + QQQQQQQ++Q+
Sbjct: 42 LHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQH 74
>gi|40068466 AT rich interactive domain 1B (SWI1-like) isoform 1
[Homo sapiens]
Length = 2231
Score = 31.6 bits (70), Expect = 0.80
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 236 LSRRHSFKSEIASFLRQRNTKTQQQQQQQKEQY 268
L H+ + ++ F +Q+ + QQQQQQQ++Q+
Sbjct: 42 LHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQH 74
>gi|40068462 AT rich interactive domain 1B (SWI1-like) isoform 3
[Homo sapiens]
Length = 2178
Score = 31.6 bits (70), Expect = 0.80
Identities = 12/33 (36%), Positives = 22/33 (66%)
Query: 236 LSRRHSFKSEIASFLRQRNTKTQQQQQQQKEQY 268
L H+ + ++ F +Q+ + QQQQQQQ++Q+
Sbjct: 42 LHHHHALQQQLNQFQQQQQQQQQQQQQQQQQQH 74
>gi|116256445 nuclear receptor co-repressor 2 isoform 2 [Homo
sapiens]
Length = 2462
Score = 31.2 bits (69), Expect = 1.0
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 230 LYSFMTLSRRHSFKSEIASFLRQRNTKTQQQQQQQKEQ 267
LY ++T + ++KS + R+R QQQQQQQ++Q
Sbjct: 468 LYYYLT-KKNENYKSLVRRSYRRRGKSQQQQQQQQQQQ 504
>gi|116256453 nuclear receptor co-repressor 2 isoform 1 [Homo
sapiens]
Length = 2524
Score = 31.2 bits (69), Expect = 1.0
Identities = 15/38 (39%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
Query: 230 LYSFMTLSRRHSFKSEIASFLRQRNTKTQQQQQQQKEQ 267
LY ++T + ++KS + R+R QQQQQQQ++Q
Sbjct: 468 LYYYLT-KKNENYKSLVRRSYRRRGKSQQQQQQQQQQQ 504
>gi|13699811 WHSC1L1 protein isoform long [Homo sapiens]
Length = 1437
Score = 30.0 bits (66), Expect = 2.3
Identities = 15/73 (20%), Positives = 33/73 (45%)
Query: 196 TIIPKKLDLKFLNISTAQDLQNPTLAIETEYCTNLYSFMTLSRRHSFKSEIASFLRQRNT 255
T+IPKK + + + +QN E+ C +L + + S K E R+++
Sbjct: 142 TVIPKKTGSPEIKLKITKTIQNGRELFESSLCGDLLNEVQASEHTKSKHESRKEKRKKSN 201
Query: 256 KTQQQQQQQKEQY 268
K + ++++ +
Sbjct: 202 KHDSSRSEERKSH 214
>gi|13699813 WHSC1L1 protein isoform short [Homo sapiens]
Length = 645
Score = 30.0 bits (66), Expect = 2.3
Identities = 15/73 (20%), Positives = 33/73 (45%)
Query: 196 TIIPKKLDLKFLNISTAQDLQNPTLAIETEYCTNLYSFMTLSRRHSFKSEIASFLRQRNT 255
T+IPKK + + + +QN E+ C +L + + S K E R+++
Sbjct: 142 TVIPKKTGSPEIKLKITKTIQNGRELFESSLCGDLLNEVQASEHTKSKHESRKEKRKKSN 201
Query: 256 KTQQQQQQQKEQY 268
K + ++++ +
Sbjct: 202 KHDSSRSEERKSH 214
>gi|119372317 xin actin-binding repeat containing 2 isoform 1 [Homo
sapiens]
Length = 3549
Score = 29.6 bits (65), Expect = 3.0
Identities = 25/92 (27%), Positives = 43/92 (46%), Gaps = 13/92 (14%)
Query: 135 PFSVVQNEQFDLIVNVFSYRNTCVEISVQVEESQNYEAN--INTWKINGSEVIQAGGRKT 192
P + E +++ ++ + V+ S Q ES+N++ N I T +N IQ G KT
Sbjct: 1395 PLDQISEESHNIMPSIDHIQGGNVKTSRQFFESENFDKNNYIRTVSVN---EIQKGNVKT 1451
Query: 193 NIWTIIPKKLD------LKFLNISTA--QDLQ 216
+ W +D L++ NI T +D+Q
Sbjct: 1452 STWLFETHTMDELRGEGLEYENIKTVTQEDVQ 1483
>gi|32307126 nuclear receptor coactivator 3 isoform a [Homo sapiens]
Length = 1424
Score = 29.3 bits (64), Expect = 4.0
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 240 HSFKSEIASFLRQRNTKTQQQQQQQKEQ 267
H F+ + + + Q+ + QQQQQQQ++Q
Sbjct: 1236 HHFRQQRVAMMMQQQQQQQQQQQQQQQQ 1263
>gi|32307124 nuclear receptor coactivator 3 isoform b [Homo sapiens]
Length = 1420
Score = 29.3 bits (64), Expect = 4.0
Identities = 11/28 (39%), Positives = 19/28 (67%)
Query: 240 HSFKSEIASFLRQRNTKTQQQQQQQKEQ 267
H F+ + + + Q+ + QQQQQQQ++Q
Sbjct: 1232 HHFRQQRVAMMMQQQQQQQQQQQQQQQQ 1259
>gi|160707881 formin 2 [Homo sapiens]
Length = 1722
Score = 29.3 bits (64), Expect = 4.0
Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 5/48 (10%)
Query: 228 TNLYSFMTLSRRHSFKSEIASFLRQRNTKTQQ-----QQQQQKEQYIG 270
T++YSF + + + S+I +R + + QQ QQQQQ++Q G
Sbjct: 181 TDIYSFHSATEQEDLLSDIQQAIRLQQQQQQQLQLQLQQQQQQQQLQG 228
>gi|119226260 calcium homeostasis endoplasmic reticulum protein
[Homo sapiens]
Length = 916
Score = 29.3 bits (64), Expect = 4.0
Identities = 21/71 (29%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 206 FLNISTAQDLQNPTLAIETEYCT--NLYSFMTLSRRHSFKSEIASFLRQR-----NTKTQ 258
+ + S Q LQ+P L + T N YS + + +F+ +I + Q + Q
Sbjct: 272 YFDDSIIQQLQSPALGLGQYQATLINEYSSVVQPVQLAFQQQIQTLKTQHEEFVTSLAQQ 331
Query: 259 QQQQQQKEQYI 269
QQQQQQ++Q +
Sbjct: 332 QQQQQQQQQQL 342
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.318 0.132 0.392
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,952,259
Number of Sequences: 37866
Number of extensions: 406276
Number of successful extensions: 2584
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 2269
Number of HSP's gapped (non-prelim): 205
length of query: 278
length of database: 18,247,518
effective HSP length: 101
effective length of query: 177
effective length of database: 14,423,052
effective search space: 2552880204
effective search space used: 2552880204
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.