Guide to the Human Genome
Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help
Name: LOC100133592 Sequence: fasta or formatted (750aa) NCBI GI: 239750255
Description:

PREDICTED: similar to ovostatin-2

Referenced in:

Protease Inhibitors

Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.2         39           2
 C cysteine            1.9         14           1
 D aspartate           4.5         34           2
 E glutamate           6.5         49           2
 F phenylalanine       5.2         39           2
 G glycine             6.3         47           3
 H histidine           2.1         16           2
 I isoleucine          4.9         37           2
 K lysine              4.5         34           2
 L leucine             9.5         71           3
 M methionine          1.6         12           1
 N asparagine          6.3         47           2
 P proline             5.5         41           2
 Q glutamine           4.9         37           2
 R arginine            2.9         22           2
 S serine              9.2         69           3
 T threonine           5.5         41           3
 V valine              8.1         61           2
 W tryptophan          1.2          9           1
 Y tyrosine            4.1         31           2
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   PREDICTED: similar to ovostatin-2 
OVOS2                 0.830   PREDICTED: ovostatin 2 
OVOS                  0.809   PREDICTED: ovostatin 
LOC732434             0.301   PREDICTED: similar to Ovostatin homolog 2 
A2M                   0.285   alpha-2-macroglobulin precursor 
PZP                   0.283   pregnancy-zone protein 
LOC728735             0.254   PREDICTED: similar to Ovostatin homolog 2 
LOC732435             0.244   PREDICTED: similar to Ovostatin homolog 2 
A2ML1                 0.208   alpha-2-macroglobulin-like 1 
LOC732435             0.150   PREDICTED: similar to Ovostatin homolog 2 
CD109                 0.101   CD109 antigen isoform 3 precursor 
CD109                 0.101   CD109 antigen isoform 2 precursor 
CD109                 0.101   CD109 antigen isoform 1 precursor 
CPAMD8                0.061   C3 and PZP-like, alpha-2-macroglobulin domain conta...
C3                    0.037   complement component 3 precursor 
LOC100133511          0.037   PREDICTED: similar to complement component C3, part...
C5                    0.033   complement component 5 preproprotein 
C4A                   0.029   complement component 4A preproprotein 
LOC100294156          0.029   PREDICTED: similar to C4A protein isoform 2 
LOC100294156          0.029   PREDICTED: similar to C4A protein isoform 1 
C4B                   0.029   complement component 4B preproprotein 
ACRC                  0.003   ACRC protein 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


Home | Table of Contents | Search text | Search genes | Search sequences | Purchase | FAQ | Blog | Help

Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

CSHL Press