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Search of human proteins with 169215257
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169215257 PREDICTED: hypothetical protein [Homo sapiens]
(75 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169215257 PREDICTED: hypothetical protein [Homo sapiens] 160 2e-40
gi|239741273 PREDICTED: hypothetical protein XP_002342153 [Homo ... 160 2e-40
gi|239752891 PREDICTED: hypothetical protein [Homo sapiens] 158 8e-40
gi|169161055 PREDICTED: hypothetical protein [Homo sapiens] 158 8e-40
gi|169161052 PREDICTED: hypothetical protein [Homo sapiens] 158 1e-39
gi|169161059 PREDICTED: hypothetical protein [Homo sapiens] 153 3e-38
gi|239758099 PREDICTED: hypothetical protein XP_002346294 [Homo ... 149 6e-37
gi|169178848 PREDICTED: hypothetical protein [Homo sapiens] 149 6e-37
gi|169174738 PREDICTED: hypothetical protein [Homo sapiens] 127 3e-30
gi|239743760 PREDICTED: hypothetical protein XP_002342953 [Homo ... 127 3e-30
gi|239747784 PREDICTED: hypothetical protein [Homo sapiens] 122 5e-29
gi|169163288 PREDICTED: hypothetical protein [Homo sapiens] 122 5e-29
gi|239749576 PREDICTED: hypothetical protein XP_002347089 [Homo ... 114 2e-26
gi|18201900 T-box 6 [Homo sapiens] 28 1.6
gi|20127408 mitochondrial trifunctional protein, alpha subunit p... 27 2.7
gi|188595677 integrin, beta 2 precursor [Homo sapiens] 27 4.6
gi|89191865 integrin, beta 2 precursor [Homo sapiens] 27 4.6
gi|19743886 regulatory factor X4 isoform a [Homo sapiens] 26 6.1
gi|6552296 ADP-ribosylation factor-like 4C [Homo sapiens] 26 6.1
gi|239755222 PREDICTED: hypothetical protein [Homo sapiens] 26 6.1
gi|239749727 PREDICTED: hypothetical protein XP_002347153 [Homo ... 26 6.1
gi|239748997 PREDICTED: hypothetical protein XP_002346878 [Homo ... 26 6.1
gi|239743982 PREDICTED: hypothetical protein XP_002343001 [Homo ... 26 6.1
gi|239743019 PREDICTED: hypothetical protein XP_002342720 [Homo ... 26 6.1
gi|15011898 regulatory factor X4 isoform b [Homo sapiens] 26 6.1
gi|47132527 regulatory factor X4 isoform c [Homo sapiens] 26 6.1
gi|15812180 butyrate response factor 1 [Homo sapiens] 26 7.9
gi|68989263 enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A... 26 7.9
>gi|169215257 PREDICTED: hypothetical protein [Homo sapiens]
Length = 75
Score = 160 bits (406), Expect = 2e-40
Identities = 75/75 (100%), Positives = 75/75 (100%)
Query: 1 MVVLGMQTEEGHCIMLRGLAPSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQGAPTHF 60
MVVLGMQTEEGHCIMLRGLAPSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQGAPTHF
Sbjct: 1 MVVLGMQTEEGHCIMLRGLAPSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQGAPTHF 60
Query: 61 PCRWRQGGSTDNPPA 75
PCRWRQGGSTDNPPA
Sbjct: 61 PCRWRQGGSTDNPPA 75
>gi|239741273 PREDICTED: hypothetical protein XP_002342153 [Homo
sapiens]
Length = 75
Score = 160 bits (406), Expect = 2e-40
Identities = 75/75 (100%), Positives = 75/75 (100%)
Query: 1 MVVLGMQTEEGHCIMLRGLAPSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQGAPTHF 60
MVVLGMQTEEGHCIMLRGLAPSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQGAPTHF
Sbjct: 1 MVVLGMQTEEGHCIMLRGLAPSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQGAPTHF 60
Query: 61 PCRWRQGGSTDNPPA 75
PCRWRQGGSTDNPPA
Sbjct: 61 PCRWRQGGSTDNPPA 75
>gi|239752891 PREDICTED: hypothetical protein [Homo sapiens]
Length = 75
Score = 158 bits (400), Expect = 8e-40
Identities = 74/75 (98%), Positives = 74/75 (98%)
Query: 1 MVVLGMQTEEGHCIMLRGLAPSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQGAPTHF 60
MVVLGMQTEEGHCIMLRGLAPSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQGAPTHF
Sbjct: 1 MVVLGMQTEEGHCIMLRGLAPSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQGAPTHF 60
Query: 61 PCRWRQGGSTDNPPA 75
PCRWRQG STDNPPA
Sbjct: 61 PCRWRQGASTDNPPA 75
>gi|169161055 PREDICTED: hypothetical protein [Homo sapiens]
Length = 75
Score = 158 bits (400), Expect = 8e-40
Identities = 74/75 (98%), Positives = 74/75 (98%)
Query: 1 MVVLGMQTEEGHCIMLRGLAPSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQGAPTHF 60
MVVLGMQTEEGHCIMLRGLAPSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQGAPTHF
Sbjct: 1 MVVLGMQTEEGHCIMLRGLAPSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQGAPTHF 60
Query: 61 PCRWRQGGSTDNPPA 75
PCRWRQG STDNPPA
Sbjct: 61 PCRWRQGASTDNPPA 75
>gi|169161052 PREDICTED: hypothetical protein [Homo sapiens]
Length = 75
Score = 158 bits (399), Expect = 1e-39
Identities = 73/75 (97%), Positives = 75/75 (100%)
Query: 1 MVVLGMQTEEGHCIMLRGLAPSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQGAPTHF 60
MVVLGM+TEEGHCIMLRGLAPSLGGTQVICKV+GLPSSIGFNTSSHLLFPATLQGAPTHF
Sbjct: 1 MVVLGMRTEEGHCIMLRGLAPSLGGTQVICKVLGLPSSIGFNTSSHLLFPATLQGAPTHF 60
Query: 61 PCRWRQGGSTDNPPA 75
PCRWRQGGSTDNPPA
Sbjct: 61 PCRWRQGGSTDNPPA 75
>gi|169161059 PREDICTED: hypothetical protein [Homo sapiens]
Length = 75
Score = 153 bits (387), Expect = 3e-38
Identities = 73/75 (97%), Positives = 73/75 (97%)
Query: 1 MVVLGMQTEEGHCIMLRGLAPSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQGAPTHF 60
MVVLGMQTEEGHCIMLRGLA SLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQGAPTHF
Sbjct: 1 MVVLGMQTEEGHCIMLRGLAHSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQGAPTHF 60
Query: 61 PCRWRQGGSTDNPPA 75
PCRWRQGGSTDN PA
Sbjct: 61 PCRWRQGGSTDNLPA 75
>gi|239758099 PREDICTED: hypothetical protein XP_002346294 [Homo
sapiens]
Length = 75
Score = 149 bits (375), Expect = 6e-37
Identities = 71/75 (94%), Positives = 71/75 (94%)
Query: 1 MVVLGMQTEEGHCIMLRGLAPSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQGAPTHF 60
MVVLGMQTEEGHCIMLRGLAPSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQ A TH
Sbjct: 1 MVVLGMQTEEGHCIMLRGLAPSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQVALTHL 60
Query: 61 PCRWRQGGSTDNPPA 75
PCRWRQGGSTD PPA
Sbjct: 61 PCRWRQGGSTDKPPA 75
>gi|169178848 PREDICTED: hypothetical protein [Homo sapiens]
Length = 75
Score = 149 bits (375), Expect = 6e-37
Identities = 71/75 (94%), Positives = 71/75 (94%)
Query: 1 MVVLGMQTEEGHCIMLRGLAPSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQGAPTHF 60
MVVLGMQTEEGHCIMLRGLAPSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQ A TH
Sbjct: 1 MVVLGMQTEEGHCIMLRGLAPSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQVALTHL 60
Query: 61 PCRWRQGGSTDNPPA 75
PCRWRQGGSTD PPA
Sbjct: 61 PCRWRQGGSTDKPPA 75
>gi|169174738 PREDICTED: hypothetical protein [Homo sapiens]
Length = 75
Score = 127 bits (318), Expect = 3e-30
Identities = 61/75 (81%), Positives = 62/75 (82%)
Query: 1 MVVLGMQTEEGHCIMLRGLAPSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQGAPTHF 60
MVVLGMQ EEGH RGLAP LG TQV+CKVVGLPS GFNTSSHLLFPATLQGA TH
Sbjct: 1 MVVLGMQREEGHQAQQRGLAPPLGRTQVMCKVVGLPSGAGFNTSSHLLFPATLQGALTHL 60
Query: 61 PCRWRQGGSTDNPPA 75
PCRWRQG STD PPA
Sbjct: 61 PCRWRQGDSTDKPPA 75
>gi|239743760 PREDICTED: hypothetical protein XP_002342953 [Homo
sapiens]
Length = 75
Score = 127 bits (318), Expect = 3e-30
Identities = 61/75 (81%), Positives = 62/75 (82%)
Query: 1 MVVLGMQTEEGHCIMLRGLAPSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQGAPTHF 60
MVVLGMQ EEGH RGLAP LG TQV+CKVVGLPS GFNTSSHLLFPATLQGA TH
Sbjct: 1 MVVLGMQREEGHQAQQRGLAPPLGRTQVMCKVVGLPSGAGFNTSSHLLFPATLQGALTHL 60
Query: 61 PCRWRQGGSTDNPPA 75
PCRWRQG STD PPA
Sbjct: 61 PCRWRQGDSTDKPPA 75
>gi|239747784 PREDICTED: hypothetical protein [Homo sapiens]
Length = 75
Score = 122 bits (307), Expect = 5e-29
Identities = 60/75 (80%), Positives = 62/75 (82%)
Query: 1 MVVLGMQTEEGHCIMLRGLAPSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQGAPTHF 60
MVVLGMQTEEGH RGLAP LG TQV+CKVVG PSS GF+TSSHLLFPATLQGA TH
Sbjct: 1 MVVLGMQTEEGHQAQQRGLAPPLGETQVMCKVVGRPSSAGFDTSSHLLFPATLQGALTHL 60
Query: 61 PCRWRQGGSTDNPPA 75
CRWRQG STD PPA
Sbjct: 61 LCRWRQGDSTDKPPA 75
>gi|169163288 PREDICTED: hypothetical protein [Homo sapiens]
Length = 75
Score = 122 bits (307), Expect = 5e-29
Identities = 60/75 (80%), Positives = 62/75 (82%)
Query: 1 MVVLGMQTEEGHCIMLRGLAPSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQGAPTHF 60
MVVLGMQTEEGH RGLAP LG TQV+CKVVG PSS GF+TSSHLLFPATLQGA TH
Sbjct: 1 MVVLGMQTEEGHQAQQRGLAPPLGETQVMCKVVGRPSSAGFDTSSHLLFPATLQGALTHL 60
Query: 61 PCRWRQGGSTDNPPA 75
CRWRQG STD PPA
Sbjct: 61 LCRWRQGDSTDKPPA 75
>gi|239749576 PREDICTED: hypothetical protein XP_002347089 [Homo
sapiens]
Length = 375
Score = 114 bits (285), Expect = 2e-26
Identities = 57/74 (77%), Positives = 59/74 (79%)
Query: 2 VVLGMQTEEGHCIMLRGLAPSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQGAPTHFP 61
VVLGMQTEEG RGLAP LGGTQV+CKV GLPSS FNTSSH+LFP TLQGA TH P
Sbjct: 302 VVLGMQTEEGCRAEQRGLAPFLGGTQVLCKVGGLPSSAEFNTSSHVLFPGTLQGALTHLP 361
Query: 62 CRWRQGGSTDNPPA 75
RWRQG STD PPA
Sbjct: 362 YRWRQGDSTDKPPA 375
>gi|18201900 T-box 6 [Homo sapiens]
Length = 436
Score = 28.1 bits (61), Expect = 1.6
Identities = 11/24 (45%), Positives = 15/24 (62%)
Query: 40 GFNTSSHLLFPATLQGAPTHFPCR 63
G + ++LL PA GAP+H P R
Sbjct: 343 GPSAEAYLLHPAAFHGAPSHLPTR 366
>gi|20127408 mitochondrial trifunctional protein, alpha subunit
precursor [Homo sapiens]
Length = 763
Score = 27.3 bits (59), Expect = 2.7
Identities = 11/25 (44%), Positives = 18/25 (72%)
Query: 15 MLRGLAPSLGGTQVICKVVGLPSSI 39
+L G P GGTQ + K+VG+P+++
Sbjct: 174 VLLGALPGAGGTQRLPKMVGVPAAL 198
>gi|188595677 integrin, beta 2 precursor [Homo sapiens]
Length = 769
Score = 26.6 bits (57), Expect = 4.6
Identities = 16/49 (32%), Positives = 22/49 (44%)
Query: 7 QTEEGHCIMLRGLAPSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQG 55
QTE G ++ L GG + +V P IG+ + LL AT G
Sbjct: 218 QTEVGKQLISGNLDAPEGGLDAMMQVAACPEEIGWRNVTRLLVFATDDG 266
>gi|89191865 integrin, beta 2 precursor [Homo sapiens]
Length = 769
Score = 26.6 bits (57), Expect = 4.6
Identities = 16/49 (32%), Positives = 22/49 (44%)
Query: 7 QTEEGHCIMLRGLAPSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQG 55
QTE G ++ L GG + +V P IG+ + LL AT G
Sbjct: 218 QTEVGKQLISGNLDAPEGGLDAMMQVAACPEEIGWRNVTRLLVFATDDG 266
>gi|19743886 regulatory factor X4 isoform a [Homo sapiens]
Length = 641
Score = 26.2 bits (56), Expect = 6.1
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 19 LAPSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQGAP 57
+ P LG + V+ +VG+ SI + S +L P LQ P
Sbjct: 145 MLPVLGSSTVV-NIVGVCDSILYKAISGVLMPTVLQALP 182
>gi|6552296 ADP-ribosylation factor-like 4C [Homo sapiens]
Length = 192
Score = 26.2 bits (56), Expect = 6.1
Identities = 23/62 (37%), Positives = 29/62 (46%), Gaps = 10/62 (16%)
Query: 12 HCIMLRGLAPSLGGTQVICKV-----VGLPSSIGFNTSSHLLFPATLQGAPTHFPCRWRQ 66
H +ML GL S G T V+ ++ V +IGFNT L T +G HF W
Sbjct: 15 HIVML-GL-DSAGKTTVLYRLKFNEFVNTVPTIGFNTEKIKLSNGTAKGISCHF---WDV 69
Query: 67 GG 68
GG
Sbjct: 70 GG 71
>gi|239755222 PREDICTED: hypothetical protein [Homo sapiens]
Length = 136
Score = 26.2 bits (56), Expect = 6.1
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 12/56 (21%)
Query: 21 PSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQGA--------PTHFPCRWRQGG 68
P++GG I V LP S ++HL + L G P F RWR+GG
Sbjct: 47 PAVGGGIAISLVTWLPRS----PAAHLPWRGQLPGHATPQLRRFPAQFRRRWRRGG 98
>gi|239749727 PREDICTED: hypothetical protein XP_002347153 [Homo
sapiens]
Length = 136
Score = 26.2 bits (56), Expect = 6.1
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 12/56 (21%)
Query: 21 PSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQGA--------PTHFPCRWRQGG 68
P++GG I V LP S ++HL + L G P F RWR+GG
Sbjct: 47 PAVGGGIAISLVTWLPRS----PAAHLPWRGQLPGHATPQLRRFPAQFRRRWRRGG 98
>gi|239748997 PREDICTED: hypothetical protein XP_002346878 [Homo
sapiens]
Length = 297
Score = 26.2 bits (56), Expect = 6.1
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 5 GMQTEEGHCIMLRGLAPSLGGTQV 28
G+Q EEG C RG A GG Q+
Sbjct: 215 GLQVEEGACRWRRGAADGGGGLQM 238
>gi|239743982 PREDICTED: hypothetical protein XP_002343001 [Homo
sapiens]
Length = 136
Score = 26.2 bits (56), Expect = 6.1
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 12/56 (21%)
Query: 21 PSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQGA--------PTHFPCRWRQGG 68
P++GG I V LP S ++HL + L G P F RWR+GG
Sbjct: 47 PAVGGGIAISLVTWLPRS----PAAHLPWRGQLPGHATPQLRRFPAQFRRRWRRGG 98
>gi|239743019 PREDICTED: hypothetical protein XP_002342720 [Homo
sapiens]
Length = 487
Score = 26.2 bits (56), Expect = 6.1
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 5 GMQTEEGHCIMLRGLAPSLGGTQV 28
G+Q EEG C RG A GG Q+
Sbjct: 405 GLQVEEGACRWRRGAADGGGGLQM 428
>gi|15011898 regulatory factor X4 isoform b [Homo sapiens]
Length = 563
Score = 26.2 bits (56), Expect = 6.1
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 19 LAPSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQGAP 57
+ P LG + V+ +VG+ SI + S +L P LQ P
Sbjct: 248 MLPVLGSSTVV-NIVGVCDSILYKAISGVLMPTVLQALP 285
>gi|47132527 regulatory factor X4 isoform c [Homo sapiens]
Length = 735
Score = 26.2 bits (56), Expect = 6.1
Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 19 LAPSLGGTQVICKVVGLPSSIGFNTSSHLLFPATLQGAP 57
+ P LG + V+ +VG+ SI + S +L P LQ P
Sbjct: 239 MLPVLGSSTVV-NIVGVCDSILYKAISGVLMPTVLQALP 276
>gi|15812180 butyrate response factor 1 [Homo sapiens]
Length = 338
Score = 25.8 bits (55), Expect = 7.9
Identities = 14/38 (36%), Positives = 19/38 (50%)
Query: 15 MLRGLAPSLGGTQVICKVVGLPSSIGFNTSSHLLFPAT 52
ML APS GG + K VG P+ GF + P++
Sbjct: 23 MLNYSAPSAGGCLLDRKAVGTPAGGGFPRRHSVTLPSS 60
>gi|68989263 enoyl-Coenzyme A, hydratase/3-hydroxyacyl Coenzyme A
dehydrogenase [Homo sapiens]
Length = 723
Score = 25.8 bits (55), Expect = 7.9
Identities = 10/27 (37%), Positives = 18/27 (66%)
Query: 18 GLAPSLGGTQVICKVVGLPSSIGFNTS 44
GL P GTQ++ ++ G+P+++ TS
Sbjct: 128 GLLPGARGTQLLPRLTGVPAALDLITS 154
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.321 0.138 0.449
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,656,623
Number of Sequences: 37866
Number of extensions: 156851
Number of successful extensions: 265
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 244
Number of HSP's gapped (non-prelim): 28
length of query: 75
length of database: 18,247,518
effective HSP length: 47
effective length of query: 28
effective length of database: 16,467,816
effective search space: 461098848
effective search space used: 461098848
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.