BLASTP 2.2.11 [Jun-05-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|169214712 PREDICTED: hypothetical protein [Homo sapiens] (235 letters) Database: hs.faa 37,866 sequences; 18,247,518 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|169214712 PREDICTED: hypothetical protein [Homo sapiens] 489 e-138 gi|113428936 PREDICTED: hypothetical protein [Homo sapiens] 481 e-136 gi|113428809 PREDICTED: hypothetical protein [Homo sapiens] 477 e-135 gi|239748777 PREDICTED: hypothetical protein [Homo sapiens] 44 1e-04 gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 42 6e-04 gi|239756720 PREDICTED: hypothetical protein XP_002345024 [Homo ... 38 0.007 gi|239751215 PREDICTED: hypothetical protein XP_002347750 [Homo ... 38 0.007 gi|239745705 PREDICTED: hypothetical protein XP_002343521 [Homo ... 38 0.007 gi|76056882 calcium binding protein 1 isoform 3 [Homo sapiens] 38 0.007 gi|55953100 tubby like protein 4 isoform 1 [Homo sapiens] 37 0.011 gi|239756380 PREDICTED: hypothetical protein [Homo sapiens] 37 0.019 gi|239750901 PREDICTED: hypothetical protein XP_002347602 [Homo ... 37 0.019 gi|239745293 PREDICTED: hypothetical protein XP_002343426 [Homo ... 37 0.019 gi|238908524 hypothetical protein LOC389333 [Homo sapiens] 36 0.033 gi|191252814 RIMS binding protein 3B [Homo sapiens] 35 0.043 gi|191252806 RIMS binding protein 3C [Homo sapiens] 35 0.043 gi|239753500 PREDICTED: hypothetical protein [Homo sapiens] 35 0.043 gi|153792195 DKFZP434H0735 protein [Homo sapiens] 35 0.043 gi|169217315 PREDICTED: hypothetical protein [Homo sapiens] 35 0.056 gi|113430659 PREDICTED: hypothetical protein [Homo sapiens] 35 0.056 gi|239748051 PREDICTED: hypothetical protein XP_002346521 [Homo ... 35 0.056 gi|113430177 PREDICTED: hypothetical protein [Homo sapiens] 35 0.056 gi|113430175 PREDICTED: hypothetical protein [Homo sapiens] 35 0.056 gi|239741944 PREDICTED: hypothetical protein XP_002342359 [Homo ... 35 0.056 gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens] 35 0.056 gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapi... 34 0.12 gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapi... 34 0.12 gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] 34 0.12 gi|62988346 glutamate receptor, ionotropic, N-methyl-D-aspartate... 33 0.16 gi|125628665 hypothetical protein LOC388284 [Homo sapiens] 33 0.16 >gi|169214712 PREDICTED: hypothetical protein [Homo sapiens] Length = 235 Score = 489 bits (1258), Expect = e-138 Identities = 235/235 (100%), Positives = 235/235 (100%) Query: 1 MQIPVASTPGGVFSPGRPSVSCDTPIPAASAQRGTKNRESYPSSAFQPPNPRQEGARLGW 60 MQIPVASTPGGVFSPGRPSVSCDTPIPAASAQRGTKNRESYPSSAFQPPNPRQEGARLGW Sbjct: 1 MQIPVASTPGGVFSPGRPSVSCDTPIPAASAQRGTKNRESYPSSAFQPPNPRQEGARLGW 60 Query: 61 DRSQPHFRRLHSPPGSDPFQQPPSRPINAAARSASRGDILAKTGIKSEIQALEAKAAVPP 120 DRSQPHFRRLHSPPGSDPFQQPPSRPINAAARSASRGDILAKTGIKSEIQALEAKAAVPP Sbjct: 61 DRSQPHFRRLHSPPGSDPFQQPPSRPINAAARSASRGDILAKTGIKSEIQALEAKAAVPP 120 Query: 121 GWKKTAGGWRMRCAGISPRTPAVSCSPFRKVPLYLHPPLQFGARPRAQLPAGSLCPRPHT 180 GWKKTAGGWRMRCAGISPRTPAVSCSPFRKVPLYLHPPLQFGARPRAQLPAGSLCPRPHT Sbjct: 121 GWKKTAGGWRMRCAGISPRTPAVSCSPFRKVPLYLHPPLQFGARPRAQLPAGSLCPRPHT 180 Query: 181 TDSAYRTLPGPRGPRGDLLKPTRLLGASPDAYLESGGRQSSRNAREKSGRQRPLS 235 TDSAYRTLPGPRGPRGDLLKPTRLLGASPDAYLESGGRQSSRNAREKSGRQRPLS Sbjct: 181 TDSAYRTLPGPRGPRGDLLKPTRLLGASPDAYLESGGRQSSRNAREKSGRQRPLS 235 >gi|113428936 PREDICTED: hypothetical protein [Homo sapiens] Length = 235 Score = 481 bits (1237), Expect = e-136 Identities = 232/235 (98%), Positives = 232/235 (98%) Query: 1 MQIPVASTPGGVFSPGRPSVSCDTPIPAASAQRGTKNRESYPSSAFQPPNPRQEGARLGW 60 MQIPVASTPGGVFSPGRPSVSCDTPIPAASAQRGTKN ESYPSSAFQPPNPRQEGAR GW Sbjct: 1 MQIPVASTPGGVFSPGRPSVSCDTPIPAASAQRGTKNGESYPSSAFQPPNPRQEGARPGW 60 Query: 61 DRSQPHFRRLHSPPGSDPFQQPPSRPINAAARSASRGDILAKTGIKSEIQALEAKAAVPP 120 DRSQPHFRRLHSPPGSDPFQQPPSRPINAAA SASRGDILAKTGIKSEIQALEAKAAVPP Sbjct: 61 DRSQPHFRRLHSPPGSDPFQQPPSRPINAAALSASRGDILAKTGIKSEIQALEAKAAVPP 120 Query: 121 GWKKTAGGWRMRCAGISPRTPAVSCSPFRKVPLYLHPPLQFGARPRAQLPAGSLCPRPHT 180 GWKKTAGGWRMRCAGISPRTPAVSCSPFRKVPLYLHPPLQFGARPRAQLPAGSLCPRPHT Sbjct: 121 GWKKTAGGWRMRCAGISPRTPAVSCSPFRKVPLYLHPPLQFGARPRAQLPAGSLCPRPHT 180 Query: 181 TDSAYRTLPGPRGPRGDLLKPTRLLGASPDAYLESGGRQSSRNAREKSGRQRPLS 235 TDSAYRTLPGPRGPRGDLLKPTRLLGASPDAYLESGGRQSSRNAREKSGRQRPLS Sbjct: 181 TDSAYRTLPGPRGPRGDLLKPTRLLGASPDAYLESGGRQSSRNAREKSGRQRPLS 235 >gi|113428809 PREDICTED: hypothetical protein [Homo sapiens] Length = 235 Score = 477 bits (1227), Expect = e-135 Identities = 231/235 (98%), Positives = 231/235 (98%) Query: 1 MQIPVASTPGGVFSPGRPSVSCDTPIPAASAQRGTKNRESYPSSAFQPPNPRQEGARLGW 60 MQIPVASTPGGVFSPGRPSVSCDTPIPAASAQRGTKN ESYPSSAFQPPNPRQEGAR GW Sbjct: 1 MQIPVASTPGGVFSPGRPSVSCDTPIPAASAQRGTKNGESYPSSAFQPPNPRQEGARPGW 60 Query: 61 DRSQPHFRRLHSPPGSDPFQQPPSRPINAAARSASRGDILAKTGIKSEIQALEAKAAVPP 120 DRSQPHFRRLHSPPGSDPFQQPPSRPINAAA SASRGDILAKTGIKSEIQALEAKAAVPP Sbjct: 61 DRSQPHFRRLHSPPGSDPFQQPPSRPINAAALSASRGDILAKTGIKSEIQALEAKAAVPP 120 Query: 121 GWKKTAGGWRMRCAGISPRTPAVSCSPFRKVPLYLHPPLQFGARPRAQLPAGSLCPRPHT 180 GWKKTAGGWRMRCAGISPRT AVSCSPFRKVPLYLHPPLQFGARPRAQLPAGSLCPRPHT Sbjct: 121 GWKKTAGGWRMRCAGISPRTLAVSCSPFRKVPLYLHPPLQFGARPRAQLPAGSLCPRPHT 180 Query: 181 TDSAYRTLPGPRGPRGDLLKPTRLLGASPDAYLESGGRQSSRNAREKSGRQRPLS 235 TDSAYRTLPGPRGPRGDLLKPTRLLGASPDAYLESGGRQSSRNAREKSGRQRPLS Sbjct: 181 TDSAYRTLPGPRGPRGDLLKPTRLLGASPDAYLESGGRQSSRNAREKSGRQRPLS 235 >gi|239748777 PREDICTED: hypothetical protein [Homo sapiens] Length = 350 Score = 43.9 bits (102), Expect = 1e-04 Identities = 66/241 (27%), Positives = 88/241 (36%), Gaps = 30/241 (12%) Query: 6 ASTPGGVFSPGRPSVSCDTPIPAASAQRGTKNRESYPSSAFQPPNPRQEGARLGWDRSQP 65 A+ PG SP RP V+ A R + + SS+F PP G+ Sbjct: 11 AAPPGVAESPARPRVNEQWGSRAHPNPRSASSAAAAASSSFPPP---------GFIHPPS 61 Query: 66 HFRRLHSPPGSDPFQQPPSRPINAAARSASRGDILAKTGIKSEIQALEAKAAVPPGWKKT 125 +HS + P P P A A G + + A + +AA P G + Sbjct: 62 SRAAVHSRLRAAPAAAPRLLPRVLAGAPARTGALAGSRLRAAAAAAHDQEAAAPTGRR-- 119 Query: 126 AGGWRMRCAGISPRTPAVSCSPFRKVP------LYLHPPLQFGARPRAQLPAG----SLC 175 WR R G SP S P + P L PP G RPRA+ G Sbjct: 120 ---WRRR-PGPSPPLQPRSRHPHTRYPRAVPEATPLRPPP--GTRPRAKSRPGCRSSPFP 173 Query: 176 PRPHTTDSA--YRTLPGPRGPR-GDLLKPTRLLGASPDAYLESGGRQSSRNAREKSGRQR 232 R T A R P PR PR GD + + L +P S GR++ + A K + Sbjct: 174 ARSRTPGEAGPPRGDPRPRAPRPGDHPRRSPALRETPSLSPPSPGRRNGKRAAGKGTTPQ 233 Query: 233 P 233 P Sbjct: 234 P 234 >gi|239751637 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens] Length = 1124 Score = 41.6 bits (96), Expect = 6e-04 Identities = 53/202 (26%), Positives = 70/202 (34%), Gaps = 17/202 (8%) Query: 4 PVASTPGGVFSPGRPSVSCDTPIPAASAQRGTKNRESYPSSAFQPP-------NPRQEGA 56 P ++P P P TP P A ++ PS PP +P+ A Sbjct: 596 PALASPPLQGLPSPPLSPLATPPPQAPPXLALPPLQAPPSPPASPPLSPLATPSPQAPNA 655 Query: 57 RLGWDRSQPHFRRLHSPPGSDPFQQPPSRPINAAARSASRGD-ILAKTGIK-----SEIQ 110 L Q F SPP PF P S P++ +A S+ LA ++ Sbjct: 656 -LAVHLLQAPFSPPPSPPVQAPFSPPASPPVSPSATPPSQAPPSLAAPPLQVPPSPPASP 714 Query: 111 ALEAKAAVPPGWKKTAGGWRMRCAGISPRTPAVSCS---PFRKVPLYLHPPLQFGARPRA 167 + A PP ++ P +P +S S P R PL PPLQ P A Sbjct: 715 PMSPSATPPPQAPPPLAAPPLQVPPSPPASPPMSPSATPPPRVPPLLAAPPLQVPPSPPA 774 Query: 168 QLPAGSLCPRPHTTDSAYRTLP 189 LP L P A T P Sbjct: 775 SLPMSPLAKPPPQAPPALATPP 796 Score = 31.2 bits (69), Expect = 0.81 Identities = 64/254 (25%), Positives = 77/254 (30%), Gaps = 61/254 (24%) Query: 7 STPGGVFSPGRPS--------------VSCD--------TPIPAASA-QRGTKNRESYPS 43 ++PG V SPGR S +S + T P SA G + S P+ Sbjct: 109 TSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPT 168 Query: 44 SAFQPP----NPRQEGARLGWDRSQPHFRRLHSPPG-----SDPFQQPPSRPINAAARSA 94 P R G +G R P R G S + + P AA R Sbjct: 169 PGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRP 228 Query: 95 SRGDIL---AKTGIKSEIQALEAKAAVPPGWKKTAGGWRMRCAGISPRTPAVSCSPFRKV 151 S G L A + S L + A P + T PR PA P K Sbjct: 229 SAGGGLQRPASRSLSSSATPLSSPARSGPSARGT------------PRAPAHPSQPKPKG 276 Query: 152 PLYLHPPLQFGARPRAQLPAGSLCPRPHTT--------------DSAYRTLPGPRGPRGD 197 L PP R A G L P T D+A LP P Sbjct: 277 LQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSGTKARPVPPPDNAATPLPATLPPSPP 336 Query: 198 LLKPTRLLGASPDA 211 L P L SP A Sbjct: 337 LATPLPLAPPSPSA 350 Score = 30.8 bits (68), Expect = 1.1 Identities = 53/231 (22%), Positives = 83/231 (35%), Gaps = 30/231 (12%) Query: 3 IPVASTPGGVFSPGRPSVSCDTPIPAASAQRGTKNRESYPSSAFQPPNPRQEGARLGWDR 62 IP P + SP + + + A + + +F +PRQ A L Sbjct: 386 IPPIQVPHSLTSPSLQAPPSPLALSSLQATTSLGSPTLQATHSFLTMSPRQTQASL---- 441 Query: 63 SQPHFRRLHSPPGSDPFQQPPSRPINAAARSASRGDI--LAKTGIKSEIQALEAKAAVPP 120 + P R +PP S P Q P S P + +++ + L+ +QAL + A+ P Sbjct: 442 TSPS-RPASTPPDSPPLQAPLSLPASPPLQTSLSPAVSPLSSPLTIHPLQALSSLASHSP 500 Query: 121 GWKKTA-----GGWRMRCAGISPRTPAVSCS--PFRKVPLYLHPPLQFGARPRA------ 167 ++ + A S +TP S + P +P PPLQ + P Sbjct: 501 QAPLSSLIMPPLETQSSLAPPSLQTPPASLTTPPLENLPSLAPPPLQTASAPLTTPHLET 560 Query: 168 ---------QLPAGSLCPRPHTTDSAYRTLPGPRGPRGDLLKPTRLLGASP 209 Q P L P T S+ T P P+ P P + L + P Sbjct: 561 PPCPAPCPLQAPPSPLTTPPPETPSSIAT-PPPQAPPALASPPLQGLPSPP 610 >gi|239756720 PREDICTED: hypothetical protein XP_002345024 [Homo sapiens] Length = 303 Score = 38.1 bits (87), Expect = 0.007 Identities = 40/130 (30%), Positives = 48/130 (36%), Gaps = 16/130 (12%) Query: 111 ALEAKAAVPPGWKKTAGGWR-------MRCAGISPRTPAVSCSPFRKVPLYLHPPLQFGA 163 A AV W K G WR RC G + PA C+ P L P GA Sbjct: 97 AAPGNTAVTIWWLKKLGSWRSLALAVLQRCRG---QVPADHCAAEAVGPWRLGP----GA 149 Query: 164 RPRAQLPAGSLCPRPHTTDSAYRTLPGPRGPRGDLLKPTRLLGASPDAYLESGGRQSSRN 223 + + +L A R H AY PGP GP +P L + LE R S+ Sbjct: 150 KEKKRLSASQARLRSHLQPGAYCQAPGP-GPHHQ-QRPRPLGSIAAQEGLEQLLRLSTPR 207 Query: 224 AREKSGRQRP 233 A R RP Sbjct: 208 ATLPGARSRP 217 >gi|239751215 PREDICTED: hypothetical protein XP_002347750 [Homo sapiens] Length = 303 Score = 38.1 bits (87), Expect = 0.007 Identities = 40/130 (30%), Positives = 48/130 (36%), Gaps = 16/130 (12%) Query: 111 ALEAKAAVPPGWKKTAGGWR-------MRCAGISPRTPAVSCSPFRKVPLYLHPPLQFGA 163 A AV W K G WR RC G + PA C+ P L P GA Sbjct: 97 AAPGNTAVTIWWLKKLGSWRSLALAVLQRCRG---QVPADHCAAEAVGPWRLGP----GA 149 Query: 164 RPRAQLPAGSLCPRPHTTDSAYRTLPGPRGPRGDLLKPTRLLGASPDAYLESGGRQSSRN 223 + + +L A R H AY PGP GP +P L + LE R S+ Sbjct: 150 KEKKRLSASQARLRSHLQPGAYCQAPGP-GPHHQ-QRPRPLGSIAAQEGLEQLLRLSTPR 207 Query: 224 AREKSGRQRP 233 A R RP Sbjct: 208 ATLPGARSRP 217 >gi|239745705 PREDICTED: hypothetical protein XP_002343521 [Homo sapiens] Length = 303 Score = 38.1 bits (87), Expect = 0.007 Identities = 40/130 (30%), Positives = 48/130 (36%), Gaps = 16/130 (12%) Query: 111 ALEAKAAVPPGWKKTAGGWR-------MRCAGISPRTPAVSCSPFRKVPLYLHPPLQFGA 163 A AV W K G WR RC G + PA C+ P L P GA Sbjct: 97 AAPGNTAVTIWWLKKLGSWRSLALAVLQRCRG---QVPADHCAAEAVGPWRLGP----GA 149 Query: 164 RPRAQLPAGSLCPRPHTTDSAYRTLPGPRGPRGDLLKPTRLLGASPDAYLESGGRQSSRN 223 + + +L A R H AY PGP GP +P L + LE R S+ Sbjct: 150 KEKKRLSASQARLRSHLQPGAYCQAPGP-GPHHQ-QRPRPLGSIAAQEGLEQLLRLSTPR 207 Query: 224 AREKSGRQRP 233 A R RP Sbjct: 208 ATLPGARSRP 217 >gi|76056882 calcium binding protein 1 isoform 3 [Homo sapiens] Length = 370 Score = 38.1 bits (87), Expect = 0.007 Identities = 51/176 (28%), Positives = 69/176 (39%), Gaps = 33/176 (18%) Query: 44 SAFQPPNPRQEGARLGWDRSQPHFRRLHSPP--GSDPFQQPPSRPINAAARSASRGDILA 101 +AF+ P +GARL R S P G P + P P +A+A A+ +A Sbjct: 7 AAFKRPG---DGARLQRVLGLGSRREPRSLPAGGPAPRRTAPPPPGHASAGPAAMSSHIA 63 Query: 102 KTGIKSEIQALEAKAAVPPGWKKTA--------GGWRMRCAGISPRTPAVSCSPFRKVPL 153 K+ K+ + L+A AA G + G R G P TP S P + PL Sbjct: 64 KSESKTSL--LKAAAAAASGGSRAPRHGPARDPGLPSRRLPGSCPATPQSSGDPSSRRPL 121 Query: 154 YLHPPLQFGA------------RPRAQLPAGSLCPRPHTTDSAYRTLPGPRGPRGD 197 P + GA RPR LPA + P P + LP RG G+ Sbjct: 122 CRPAPREEGARGSQRVLPQAHCRPREALPAAASRPSPSS------PLPPARGRDGE 171 >gi|55953100 tubby like protein 4 isoform 1 [Homo sapiens] Length = 1543 Score = 37.4 bits (85), Expect = 0.011 Identities = 31/107 (28%), Positives = 44/107 (41%), Gaps = 15/107 (14%) Query: 74 PGSDPFQQPPSRPINAAARSASRGDILAKTGIKSEIQALEAKAAVPPGWKKTAGGWRMRC 133 PGS + PP + A S D L+ T + A+ + PP + Sbjct: 1192 PGS--YNNPPLPGVQAPC---SPKDALSPTQFAQQEPAVVLQPLYPPS---------LSY 1237 Query: 134 AGISPRTPAVS-CSPFRKVPLYLHPPLQFGARPRAQLPAGSLCPRPH 179 + P P S CS + P+ LHP + A P Q P G+L P+PH Sbjct: 1238 CTLPPMYPGSSTCSSLQLPPVALHPWSSYSACPPMQNPQGTLPPKPH 1284 >gi|239756380 PREDICTED: hypothetical protein [Homo sapiens] Length = 151 Score = 36.6 bits (83), Expect = 0.019 Identities = 42/136 (30%), Positives = 51/136 (37%), Gaps = 16/136 (11%) Query: 90 AARSASRGDILAKTGIKSEIQALEAKAAVPPGWKKTAGGWRMRCAGI-----SPRTPAVS 144 A +A +I A+ G Q E +AA P + G R A P + Sbjct: 18 AGSAAGLREIPAERGDAGSEQGEEQEAAEHPSAPRPPGHGCARAAASFGRASRPLGSGAA 77 Query: 145 CSPFRKVPLYLHPPLQFGARPRAQLPAGSLCPRPHTTDSAYRTLPG---PRGPRGDLLKP 201 PF+ PL P L GA PRA+ P RPH LPG P GP DL Sbjct: 78 FDPFKSAPLGAEPALSSGAVPRARRPP----RRPHPP----ARLPGRGTPFGPPRDLHTH 129 Query: 202 TRLLGASPDAYLESGG 217 T +P SGG Sbjct: 130 TLARTRAPLPPGASGG 145 >gi|239750901 PREDICTED: hypothetical protein XP_002347602 [Homo sapiens] Length = 151 Score = 36.6 bits (83), Expect = 0.019 Identities = 42/136 (30%), Positives = 51/136 (37%), Gaps = 16/136 (11%) Query: 90 AARSASRGDILAKTGIKSEIQALEAKAAVPPGWKKTAGGWRMRCAGI-----SPRTPAVS 144 A +A +I A+ G Q E +AA P + G R A P + Sbjct: 18 AGSAAGLREIPAERGDAGSEQGEEQEAAEHPSAPRPPGHGCARAAASFGRASRPLGSGAA 77 Query: 145 CSPFRKVPLYLHPPLQFGARPRAQLPAGSLCPRPHTTDSAYRTLPG---PRGPRGDLLKP 201 PF+ PL P L GA PRA+ P RPH LPG P GP DL Sbjct: 78 FDPFKSAPLGAEPALSSGAVPRARRPP----RRPHPP----ARLPGRGTPFGPPRDLHTH 129 Query: 202 TRLLGASPDAYLESGG 217 T +P SGG Sbjct: 130 TLARTRAPLPPGASGG 145 >gi|239745293 PREDICTED: hypothetical protein XP_002343426 [Homo sapiens] Length = 151 Score = 36.6 bits (83), Expect = 0.019 Identities = 42/136 (30%), Positives = 51/136 (37%), Gaps = 16/136 (11%) Query: 90 AARSASRGDILAKTGIKSEIQALEAKAAVPPGWKKTAGGWRMRCAGI-----SPRTPAVS 144 A +A +I A+ G Q E +AA P + G R A P + Sbjct: 18 AGSAAGLREIPAERGDAGSEQGEEQEAAEHPSAPRPPGHGCARAAASFGRASRPLGSGAA 77 Query: 145 CSPFRKVPLYLHPPLQFGARPRAQLPAGSLCPRPHTTDSAYRTLPG---PRGPRGDLLKP 201 PF+ PL P L GA PRA+ P RPH LPG P GP DL Sbjct: 78 FDPFKSAPLGAEPALSSGAVPRARRPP----RRPHPP----ARLPGRGTPFGPPRDLHTH 129 Query: 202 TRLLGASPDAYLESGG 217 T +P SGG Sbjct: 130 TLARTRAPLPPGASGG 145 >gi|238908524 hypothetical protein LOC389333 [Homo sapiens] Length = 1015 Score = 35.8 bits (81), Expect = 0.033 Identities = 30/94 (31%), Positives = 42/94 (44%), Gaps = 5/94 (5%) Query: 9 PGGVFSP--GRPSVSCDTPIPAASAQRGTKNRESYPSSAFQPPNPRQEGARLGWDRSQPH 66 P GV SP G P + +P P + + T P++A Q P PR+ A G R+ P Sbjct: 793 PAGVRSPRPGSPQMQA-SPSPGIAPKPKTPPTAPEPAAAVQAPLPREPLALAG--RTAPA 849 Query: 67 FRRLHSPPGSDPFQQPPSRPINAAARSASRGDIL 100 R S P +D Q PS+ +A G +L Sbjct: 850 QPRAASAPPTDRSPQSPSQGARRQPGAAPLGKVL 883 >gi|191252814 RIMS binding protein 3B [Homo sapiens] Length = 1639 Score = 35.4 bits (80), Expect = 0.043 Identities = 35/116 (30%), Positives = 45/116 (38%), Gaps = 19/116 (16%) Query: 6 ASTPGGVFSPGRPSVSCDTPIPAASAQRGTKNRESYPSSAFQPPNPRQEGARLGWDRSQP 65 +S+P G+ S S+ C P + S T++ S +P +P D S P Sbjct: 271 SSSPDGLLSTHASSLDCFAPACSRSLD-STRSLPKASKSEERPSSP---------DTSTP 320 Query: 66 HFRRLHSPPGSDPFQQPPSRPINAAARSASRGDILAKTGIKSEIQALEAKAAVPPG 121 RRL PP P PPS A R S + G SE Q E PPG Sbjct: 321 GSRRLSPPPSPLPPPPPPS-----AHRKLSN----PRGGEGSESQPCEVLTPSPPG 367 >gi|191252806 RIMS binding protein 3C [Homo sapiens] Length = 1639 Score = 35.4 bits (80), Expect = 0.043 Identities = 35/116 (30%), Positives = 45/116 (38%), Gaps = 19/116 (16%) Query: 6 ASTPGGVFSPGRPSVSCDTPIPAASAQRGTKNRESYPSSAFQPPNPRQEGARLGWDRSQP 65 +S+P G+ S S+ C P + S T++ S +P +P D S P Sbjct: 271 SSSPDGLLSTHASSLDCFAPACSRSLD-STRSLPKASKSEERPSSP---------DTSTP 320 Query: 66 HFRRLHSPPGSDPFQQPPSRPINAAARSASRGDILAKTGIKSEIQALEAKAAVPPG 121 RRL PP P PPS A R S + G SE Q E PPG Sbjct: 321 GSRRLSPPPSPLPPPPPPS-----AHRKLSN----PRGGEGSESQPCEVLTPSPPG 367 >gi|239753500 PREDICTED: hypothetical protein [Homo sapiens] Length = 213 Score = 35.4 bits (80), Expect = 0.043 Identities = 32/120 (26%), Positives = 41/120 (34%), Gaps = 24/120 (20%) Query: 49 PNPRQEGARLGWDRSQPHFRRLHSPPGSDPFQQPPSRPINAAARSASRGDILAKTGIKSE 108 P+PR AR P RL P +P + P+R + AA SA R A G + Sbjct: 11 PSPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREGSAAPDGARGS 70 Query: 109 IQALEAKAAVPPGWKKTAGGWRMRCAGISPRTPAVSCSPFRKVPLYLHPPLQFGARPRAQ 168 L A + P PR P +P HP L RP A+ Sbjct: 71 TPGLAASRELSP----------------PPRAPRTVPAP--------HPRLSPARRPGAE 106 >gi|153792195 DKFZP434H0735 protein [Homo sapiens] Length = 1639 Score = 35.4 bits (80), Expect = 0.043 Identities = 35/116 (30%), Positives = 45/116 (38%), Gaps = 19/116 (16%) Query: 6 ASTPGGVFSPGRPSVSCDTPIPAASAQRGTKNRESYPSSAFQPPNPRQEGARLGWDRSQP 65 +S+P G+ S S+ C P + S T++ S +P +P D S P Sbjct: 271 SSSPDGLLSTHASSLDCFAPACSRSLD-STRSLPKASKSEERPSSP---------DTSTP 320 Query: 66 HFRRLHSPPGSDPFQQPPSRPINAAARSASRGDILAKTGIKSEIQALEAKAAVPPG 121 RRL PP P PPS A R S + G SE Q E PPG Sbjct: 321 GSRRLSPPPSPLPPPPPPS-----AHRKLSN----PRGGEGSESQPCEVLTPSPPG 367 >gi|169217315 PREDICTED: hypothetical protein [Homo sapiens] Length = 2061 Score = 35.0 bits (79), Expect = 0.056 Identities = 60/226 (26%), Positives = 84/226 (37%), Gaps = 37/226 (16%) Query: 5 VASTPGGVFSPGRPSVSCDTPIPAASAQRGTKNRESYPSSAFQPPNPRQEGARLGWDRSQ 64 +ASTPG + P++ P P GT R+S P P+P GA G DRS Sbjct: 1099 IASTPGTLHVERSPALRAIVPTP------GTLGRDSSPGRTSIIPSP---GALHG-DRSP 1148 Query: 65 PHFRRLHSPPGSDPFQQPPSRPINAAARSASRGDI-LAKTGIKSEIQALEAKAAVPPGWK 123 H + S PG+ + A RGD A+ I AL + WK Sbjct: 1149 AHLD-IASTPGALHGDSSQAHTAIAPTPGTMRGDSSTARMAIAPSAGALRGDRS----WK 1203 Query: 124 K-----TAGGWRMRCAGISPRTPAVSCSP----------FRKVPLYLHPPLQFGARPRAQ 168 + T G R + S + A++ +P RK P GA + Sbjct: 1204 RKAIASTPGALRGNRSDRSRKRKAIASTPGALLGNRSDRSRKHKAIAPTP---GAPRIDR 1260 Query: 169 LPA-GSLCPRPHTT--DSAYRTLPGPRGPRGDLLKPTRLLGASPDA 211 PA ++ P P DS+ P P PRGD + ++P A Sbjct: 1261 SPACRAIAPTPGALGDDSSTAIAPTPGTPRGDSSPANTAIASTPGA 1306 Score = 30.4 bits (67), Expect = 1.4 Identities = 57/233 (24%), Positives = 76/233 (32%), Gaps = 27/233 (11%) Query: 5 VASTPGGVFSPGRPSVSCDTPIPAASAQRGTKNRESYPSSAFQPPNPRQEGARLGWDRSQ 64 +A TPG + P+ + P P A G ++PS+ L D S Sbjct: 988 IAPTPGALHGDSSPAHTSIIPSPGALHGDGPPAHMAFPSTP----------GTLHGDASH 1037 Query: 65 PHFRRLHSPPGSDPFQQPPSRPINAAARSASRGD------ILAKT-----GIKSEIQALE 113 H + PG+ +R A + A RGD +A T G +S+ Sbjct: 1038 AHM-AIAPTPGTMRGDSSTARTATAPSPGALRGDRSWKRKAIASTPGALHGNRSDRSRKC 1096 Query: 114 AKAAVPPGWKKTAGGWRMRCAGISPRTPAVSCSPFRKVPLYLHPPLQFGARPRAQLPAGS 173 A PG +R +P T SP R + P G R A L S Sbjct: 1097 KAIASTPGTLHVERSPALRAIVPTPGTLGRDSSPGR-TSIIPSPGALHGDRSPAHLDIAS 1155 Query: 174 LCPRPHTTDSAYRT--LPGPRGPRGDLLKPTRLLGASPDAYLESGGRQSSRNA 224 H S T P P RGD T + +P A G R R A Sbjct: 1156 TPGALHGDSSQAHTAIAPTPGTMRGD--SSTARMAIAPSAGALRGDRSWKRKA 1206 >gi|113430659 PREDICTED: hypothetical protein [Homo sapiens] Length = 2061 Score = 35.0 bits (79), Expect = 0.056 Identities = 60/226 (26%), Positives = 84/226 (37%), Gaps = 37/226 (16%) Query: 5 VASTPGGVFSPGRPSVSCDTPIPAASAQRGTKNRESYPSSAFQPPNPRQEGARLGWDRSQ 64 +ASTPG + P++ P P GT R+S P P+P GA G DRS Sbjct: 1099 IASTPGTLHVERSPALRAIVPTP------GTLGRDSSPGRTSIIPSP---GALHG-DRSP 1148 Query: 65 PHFRRLHSPPGSDPFQQPPSRPINAAARSASRGDI-LAKTGIKSEIQALEAKAAVPPGWK 123 H + S PG+ + A RGD A+ I AL + WK Sbjct: 1149 AHLD-IASTPGALHGDSSQAHTAIAPTPGTMRGDSSTARMAIAPSAGALRGDRS----WK 1203 Query: 124 K-----TAGGWRMRCAGISPRTPAVSCSP----------FRKVPLYLHPPLQFGARPRAQ 168 + T G R + S + A++ +P RK P GA + Sbjct: 1204 RKAIASTPGALRGNRSDRSRKRKAIASTPGALLGNRSDRSRKRKAIAPTP---GAPRIDR 1260 Query: 169 LPA-GSLCPRPHTT--DSAYRTLPGPRGPRGDLLKPTRLLGASPDA 211 PA ++ P P DS+ P P PRGD + ++P A Sbjct: 1261 SPACRAIAPTPGALGDDSSTAIAPTPGTPRGDSSPANTAIASTPGA 1306 Score = 30.4 bits (67), Expect = 1.4 Identities = 57/233 (24%), Positives = 76/233 (32%), Gaps = 27/233 (11%) Query: 5 VASTPGGVFSPGRPSVSCDTPIPAASAQRGTKNRESYPSSAFQPPNPRQEGARLGWDRSQ 64 +A TPG + P+ + P P A G ++PS+ L D S Sbjct: 988 IAPTPGALHGDSSPAHTSIIPSPGALHGDGPPAHMAFPSTP----------GTLHGDASH 1037 Query: 65 PHFRRLHSPPGSDPFQQPPSRPINAAARSASRGD------ILAKT-----GIKSEIQALE 113 H + PG+ +R A + A RGD +A T G +S+ Sbjct: 1038 AHM-AIAPTPGTMRGDSSTARTATAPSPGALRGDRSWKRKAIASTPGALHGNRSDRSRKC 1096 Query: 114 AKAAVPPGWKKTAGGWRMRCAGISPRTPAVSCSPFRKVPLYLHPPLQFGARPRAQLPAGS 173 A PG +R +P T SP R + P G R A L S Sbjct: 1097 KAIASTPGTLHVERSPALRAIVPTPGTLGRDSSPGR-TSIIPSPGALHGDRSPAHLDIAS 1155 Query: 174 LCPRPHTTDSAYRT--LPGPRGPRGDLLKPTRLLGASPDAYLESGGRQSSRNA 224 H S T P P RGD T + +P A G R R A Sbjct: 1156 TPGALHGDSSQAHTAIAPTPGTMRGD--SSTARMAIAPSAGALRGDRSWKRKA 1206 >gi|239748051 PREDICTED: hypothetical protein XP_002346521 [Homo sapiens] Length = 213 Score = 35.0 bits (79), Expect = 0.056 Identities = 32/120 (26%), Positives = 40/120 (33%), Gaps = 24/120 (20%) Query: 49 PNPRQEGARLGWDRSQPHFRRLHSPPGSDPFQQPPSRPINAAARSASRGDILAKTGIKSE 108 P PR AR P RL P +P + P+R + AA SA R A G + Sbjct: 11 PRPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREGSAAPDGARGS 70 Query: 109 IQALEAKAAVPPGWKKTAGGWRMRCAGISPRTPAVSCSPFRKVPLYLHPPLQFGARPRAQ 168 L A + P PR P +P HP L RP A+ Sbjct: 71 TPGLAASRELSP----------------PPRAPRTVPAP--------HPRLSPARRPGAE 106 >gi|113430177 PREDICTED: hypothetical protein [Homo sapiens] Length = 2028 Score = 35.0 bits (79), Expect = 0.056 Identities = 60/226 (26%), Positives = 84/226 (37%), Gaps = 37/226 (16%) Query: 5 VASTPGGVFSPGRPSVSCDTPIPAASAQRGTKNRESYPSSAFQPPNPRQEGARLGWDRSQ 64 +ASTPG + P++ P P GT R+S P P+P GA G DRS Sbjct: 1067 IASTPGTLHVERSPALRAIVPTP------GTLGRDSSPGRTSIIPSP---GALHG-DRSP 1116 Query: 65 PHFRRLHSPPGSDPFQQPPSRPINAAARSASRGDI-LAKTGIKSEIQALEAKAAVPPGWK 123 H + S PG+ + A RGD A+ I AL + WK Sbjct: 1117 AHLD-IASTPGALHGDSSQAHTAIAPTPGTMRGDSSTARMAIAPSAGALRGDRS----WK 1171 Query: 124 K-----TAGGWRMRCAGISPRTPAVSCSP----------FRKVPLYLHPPLQFGARPRAQ 168 + T G R + S + A++ +P RK P GA + Sbjct: 1172 RKAIASTPGALRGNRSDRSRKRKAIASTPGALLGNRSDRSRKRKAIAPTP---GAPRIDR 1228 Query: 169 LPA-GSLCPRPHTT--DSAYRTLPGPRGPRGDLLKPTRLLGASPDA 211 PA ++ P P DS+ P P PRGD + ++P A Sbjct: 1229 SPACRAIAPTPGALGDDSSTAIAPTPGTPRGDSSPANTAIASTPGA 1274 Score = 30.4 bits (67), Expect = 1.4 Identities = 57/233 (24%), Positives = 76/233 (32%), Gaps = 27/233 (11%) Query: 5 VASTPGGVFSPGRPSVSCDTPIPAASAQRGTKNRESYPSSAFQPPNPRQEGARLGWDRSQ 64 +A TPG + P+ + P P A G ++PS+ L D S Sbjct: 956 IAPTPGALHGDSSPAHTSIIPSPGALHGDGPPAHMAFPSTP----------GTLHGDASH 1005 Query: 65 PHFRRLHSPPGSDPFQQPPSRPINAAARSASRGD------ILAKT-----GIKSEIQALE 113 H + PG+ +R A + A RGD +A T G +S+ Sbjct: 1006 AHM-AIAPTPGTMRGDSSTARTATAPSPGALRGDRSWKRKAIASTPGALHGNRSDRSRKC 1064 Query: 114 AKAAVPPGWKKTAGGWRMRCAGISPRTPAVSCSPFRKVPLYLHPPLQFGARPRAQLPAGS 173 A PG +R +P T SP R + P G R A L S Sbjct: 1065 KAIASTPGTLHVERSPALRAIVPTPGTLGRDSSPGR-TSIIPSPGALHGDRSPAHLDIAS 1123 Query: 174 LCPRPHTTDSAYRT--LPGPRGPRGDLLKPTRLLGASPDAYLESGGRQSSRNA 224 H S T P P RGD T + +P A G R R A Sbjct: 1124 TPGALHGDSSQAHTAIAPTPGTMRGD--SSTARMAIAPSAGALRGDRSWKRKA 1174 >gi|113430175 PREDICTED: hypothetical protein [Homo sapiens] Length = 1934 Score = 35.0 bits (79), Expect = 0.056 Identities = 60/226 (26%), Positives = 84/226 (37%), Gaps = 37/226 (16%) Query: 5 VASTPGGVFSPGRPSVSCDTPIPAASAQRGTKNRESYPSSAFQPPNPRQEGARLGWDRSQ 64 +ASTPG + P++ P P GT R+S P P+P GA G DRS Sbjct: 973 IASTPGTLHVERSPALRAIVPTP------GTLGRDSSPGRTSIIPSP---GALHG-DRSP 1022 Query: 65 PHFRRLHSPPGSDPFQQPPSRPINAAARSASRGDI-LAKTGIKSEIQALEAKAAVPPGWK 123 H + S PG+ + A RGD A+ I AL + WK Sbjct: 1023 AHLD-IASTPGALHGDSSQAHTAIAPTPGTMRGDSSTARMAIAPSAGALRGDRS----WK 1077 Query: 124 K-----TAGGWRMRCAGISPRTPAVSCSP----------FRKVPLYLHPPLQFGARPRAQ 168 + T G R + S + A++ +P RK P GA + Sbjct: 1078 RKAIASTPGALRGNRSDRSRKRKAIASTPGALLGNRSDRSRKRKAIAPTP---GAPRIDR 1134 Query: 169 LPA-GSLCPRPHTT--DSAYRTLPGPRGPRGDLLKPTRLLGASPDA 211 PA ++ P P DS+ P P PRGD + ++P A Sbjct: 1135 SPACRAIAPTPGALGDDSSTAIAPTPGTPRGDSSPANTAIASTPGA 1180 Score = 30.4 bits (67), Expect = 1.4 Identities = 57/233 (24%), Positives = 76/233 (32%), Gaps = 27/233 (11%) Query: 5 VASTPGGVFSPGRPSVSCDTPIPAASAQRGTKNRESYPSSAFQPPNPRQEGARLGWDRSQ 64 +A TPG + P+ + P P A G ++PS+ L D S Sbjct: 862 IAPTPGALHGDSSPAHTSIIPSPGALHGDGPPAHMAFPSTP----------GTLHGDASH 911 Query: 65 PHFRRLHSPPGSDPFQQPPSRPINAAARSASRGD------ILAKT-----GIKSEIQALE 113 H + PG+ +R A + A RGD +A T G +S+ Sbjct: 912 AHM-AIAPTPGTMRGDSSTARTATAPSPGALRGDRSWKRKAIASTPGALHGNRSDRSRKC 970 Query: 114 AKAAVPPGWKKTAGGWRMRCAGISPRTPAVSCSPFRKVPLYLHPPLQFGARPRAQLPAGS 173 A PG +R +P T SP R + P G R A L S Sbjct: 971 KAIASTPGTLHVERSPALRAIVPTPGTLGRDSSPGR-TSIIPSPGALHGDRSPAHLDIAS 1029 Query: 174 LCPRPHTTDSAYRT--LPGPRGPRGDLLKPTRLLGASPDAYLESGGRQSSRNA 224 H S T P P RGD T + +P A G R R A Sbjct: 1030 TPGALHGDSSQAHTAIAPTPGTMRGD--SSTARMAIAPSAGALRGDRSWKRKA 1080 >gi|239741944 PREDICTED: hypothetical protein XP_002342359 [Homo sapiens] Length = 213 Score = 35.0 bits (79), Expect = 0.056 Identities = 32/120 (26%), Positives = 40/120 (33%), Gaps = 24/120 (20%) Query: 49 PNPRQEGARLGWDRSQPHFRRLHSPPGSDPFQQPPSRPINAAARSASRGDILAKTGIKSE 108 P PR AR P RL P +P + P+R + AA SA R A G + Sbjct: 11 PRPRSSPARSHPPAPLPFPERLPRPAAKEPAARTPARQVFPAAASAGREGSAAPDGARGS 70 Query: 109 IQALEAKAAVPPGWKKTAGGWRMRCAGISPRTPAVSCSPFRKVPLYLHPPLQFGARPRAQ 168 L A + P PR P +P HP L RP A+ Sbjct: 71 TPGLAASRELSP----------------PPRAPRTVPAP--------HPRLSPARRPGAE 106 >gi|51477700 mediator complex subunit 15 isoform a [Homo sapiens] Length = 788 Score = 35.0 bits (79), Expect = 0.056 Identities = 44/185 (23%), Positives = 73/185 (39%), Gaps = 24/185 (12%) Query: 42 PSSAFQPPNPRQEGARLG-WDRSQPHFRRLHSPPGSDPFQQPPSRPINAAARSASRGDIL 100 P QPP + + ++L ++QP + + PG + QPP + + A Sbjct: 302 PPQPQQPPVAQNQPSQLPPQSQTQPLVSQAQALPGQMLYTQPPLKFVRAPMVVQQPPVQP 361 Query: 101 AKTGIKSEIQALEAKAAVPPGWKKTA-----GGWRMRCAGISPRTPAVSCSPFRKVPLYL 155 ++ +Q +A V PG + GG +R P T AVS P +PL Sbjct: 362 QVQQQQTAVQTAQAAQMVAPGVQMITEALAQGGMHIRAR--FPPTTAVSAIPSSSIPL-- 417 Query: 156 HPPLQFGARPRAQLPAGSL----CPRPHTTDSAYRTLPGPRGPRGDLLKPTRLLGASPDA 211 G +P AQ+ SL P P +++P P P +P+ + P++ Sbjct: 418 ------GRQPMAQVSQSSLPMLSSPSPGQQVQTPQSMPPPPQPSPQPGQPS----SQPNS 467 Query: 212 YLESG 216 + SG Sbjct: 468 NVSSG 472 >gi|239757130 PREDICTED: hypothetical protein FLJ22184 [Homo sapiens] Length = 855 Score = 33.9 bits (76), Expect = 0.12 Identities = 52/198 (26%), Positives = 67/198 (33%), Gaps = 39/198 (19%) Query: 13 FSPGRPSVSCDTPIPAASAQRGTKNRESYPSSAFQPP-------NPRQEGARLGWDRSQP 65 F P P TP P A ++ PS PP +P+ A L Q Sbjct: 380 FLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNA-LAVHLLQA 438 Query: 66 HFRRLHSPPGSDPFQQPPSRPINAAARSASRGDILAKTGIKSEIQALEAKAAVPPGWKKT 125 F SPP PF P S P++ +A S QA + AA P Sbjct: 439 PFSPPPSPPVQAPFSPPASPPVSPSATPPS--------------QAPPSLAAPP------ 478 Query: 126 AGGWRMRCAGISPRTPAVSCS---PFRKVPLYLHPPLQFGARPRAQLPAGSLCPRPHTTD 182 ++ P +P +S S P + P PPLQ A+P Q P P Sbjct: 479 -----LQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQL-AKPPPQAPPALATPPLQALP 532 Query: 183 SAYRTLPG--PRGPRGDL 198 S + PG P P L Sbjct: 533 SPPASFPGQAPFSPSASL 550 Score = 28.5 bits (62), Expect = 5.2 Identities = 56/223 (25%), Positives = 68/223 (30%), Gaps = 47/223 (21%) Query: 7 STPGGVFSPGRPS--------------VSCD--------TPIPAASA-QRGTKNRESYPS 43 ++PG V SPGR S +S + T P SA G + S P+ Sbjct: 109 TSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPT 168 Query: 44 SAFQPP----NPRQEGARLGWDRSQPHFRRLHSPPG-----SDPFQQPPSRPINAAARSA 94 P R G +G R P R G S + + P AA R Sbjct: 169 PGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRP 228 Query: 95 SRGDIL---AKTGIKSEIQALEAKAAVPPGWKKTAGGWRMRCAGISPRTPAVSCSPFRKV 151 S G L A + S L + A P + T PR PA P K Sbjct: 229 SAGGGLQRPASRSLSSSATPLSSPARSGPSARGT------------PRAPAHPSQPKPKG 276 Query: 152 PLYLHPPLQFGARPRAQLPAGSLCPRPHTTDSAYRTLPGPRGP 194 L PP R A G L P T S L P Sbjct: 277 LQALRPPQVTPPRKDAAPALGPLSSSPLATPSPSAALQSQAPP 319 >gi|239746149 PREDICTED: hypothetical protein LOC80164 [Homo sapiens] Length = 816 Score = 33.9 bits (76), Expect = 0.12 Identities = 52/198 (26%), Positives = 67/198 (33%), Gaps = 39/198 (19%) Query: 13 FSPGRPSVSCDTPIPAASAQRGTKNRESYPSSAFQPP-------NPRQEGARLGWDRSQP 65 F P P TP P A ++ PS PP +P+ A L Q Sbjct: 341 FLPSPPLSPLATPPPQAPPALALPPLQAPPSPPASPPLSPLATPSPQAPNA-LAVHLLQA 399 Query: 66 HFRRLHSPPGSDPFQQPPSRPINAAARSASRGDILAKTGIKSEIQALEAKAAVPPGWKKT 125 F SPP PF P S P++ +A S QA + AA P Sbjct: 400 PFSPPPSPPVQAPFSPPASPPVSPSATPPS--------------QAPPSLAAPP------ 439 Query: 126 AGGWRMRCAGISPRTPAVSCS---PFRKVPLYLHPPLQFGARPRAQLPAGSLCPRPHTTD 182 ++ P +P +S S P + P PPLQ A+P Q P P Sbjct: 440 -----LQVPPSPPASPPMSPSATPPPQAPPPLAAPPLQL-AKPPPQAPPALATPPLQALP 493 Query: 183 SAYRTLPG--PRGPRGDL 198 S + PG P P L Sbjct: 494 SPPASFPGQAPFSPSASL 511 Score = 29.3 bits (64), Expect = 3.1 Identities = 60/240 (25%), Positives = 73/240 (30%), Gaps = 54/240 (22%) Query: 7 STPGGVFSPGRPS--------------VSCD--------TPIPAASA-QRGTKNRESYPS 43 ++PG V SPGR S +S + T P SA G + S P+ Sbjct: 100 TSPGPVSSPGRASGTTRPGPLGQKGLRISAEETVARGKATEAPKRSALSAGARRDTSGPT 159 Query: 44 SAFQPP----NPRQEGARLGWDRSQPHFRRLHSPPG-----SDPFQQPPSRPINAAARSA 94 P R G +G R P R G S + + P AA R Sbjct: 160 PGTPSPAMARRSRAAGTEVGLPRPAPSARPRPPTEGPRKSVSSASEHSTTEPSPAARRRP 219 Query: 95 SRGDIL---AKTGIKSEIQALEAKAAVPPGWKKTAGGWRMRCAGISPRTPAVSCSPFRKV 151 S G L A + S L + A P + T PR PA P K Sbjct: 220 SAGGGLQRPASRSLSSSATPLSSPARSGPSARGT------------PRAPAHPSQPKPKG 267 Query: 152 PLYLHPPLQFGARPRAQLPAGSLCPRPHTTDSAYRTLPGPRGPRGDLLKPTRLLGASPDA 211 L PP R A G L P T P P P P+ SP A Sbjct: 268 LQALRPPQVTPPRKDAAPALGPLSSSPLAT-------PSPSAPPSPSAPPSLQTLPSPPA 320 >gi|46852161 methyl-CpG binding domain protein 6 [Homo sapiens] Length = 1003 Score = 33.9 bits (76), Expect = 0.12 Identities = 60/216 (27%), Positives = 76/216 (35%), Gaps = 33/216 (15%) Query: 4 PVASTPGGVFSPGRPSVSCDTPIPAA-SAQRGTKNRESYPSSAFQPPNPRQEGA-RLGWD 61 P + PGG+F P P+P+ S+ R + PS A PP A W Sbjct: 176 PTLAGPGGLFPPRLAD-----PVPSGGSSSPRFLPRGNAPSPAPPPPPAISLNAPSYNWG 230 Query: 62 ---RSQPHFRRLHSPPGSDPFQQPPSRPINAAARSA-------SRGDILAKTGIKSEIQA 111 RS L SPP PPS P A ++ A G S+ Sbjct: 231 AALRSSLVPSDLGSPPAPHASSSPPSDPPLFHCSDALTPPPLPPSNNLPAHPGPASQPPV 290 Query: 112 LEAKAAVPPGWKKTAGGWRMRCAGISPRTPAVSCSPFRKVPLYLHPPLQ-----FGARPR 166 A +P G + G P + S K HPPL G RPR Sbjct: 291 SSATMHLPLVLGPLGGAPTVEGPGAPPFLASSLLSAAAKAQ---HPPLPPPSTLQGRRPR 347 Query: 167 AQLP----AGSLCP---RPHTTDSAYRTLPGPRGPR 195 AQ P + SL P RP + +R L G RGP+ Sbjct: 348 AQAPSASHSSSLRPSQRRPRRPPTVFRLLEG-RGPQ 382 Score = 30.4 bits (67), Expect = 1.4 Identities = 31/94 (32%), Positives = 37/94 (39%), Gaps = 21/94 (22%) Query: 137 SPRTPAVSCSPFRKVPLYLHPPLQFGARPRAQLPA--------GSLCPRPHTTDSAYRTL 188 S +P SP + PP ARP ++P GSL P P + A+ TL Sbjct: 122 SHSSPGEGASPQMFHTVSPGPP---SARPPCRVPPTTPLNGGPGSLPPEPPSVSQAFPTL 178 Query: 189 PGPRGPRGDLLKPTRLLGASPDAYLESGGRQSSR 222 GP G L P RL P SGG S R Sbjct: 179 AGPGG-----LFPPRLADPVP-----SGGSSSPR 202 >gi|62988346 glutamate receptor, ionotropic, N-methyl-D-aspartate 3B [Homo sapiens] Length = 1043 Score = 33.5 bits (75), Expect = 0.16 Identities = 27/75 (36%), Positives = 29/75 (38%), Gaps = 11/75 (14%) Query: 120 PGWKKTAGGWR-----MRCAGISPRTP---AVSCSPFRKVPLYLHPPLQFGARPR--AQL 169 P W T G WR + G S R P P +V L P F P Q Sbjct: 381 PAWA-TVGSWRDGQLDLEPGGASARPPPPQGAQVWPKLRVVTLLEHPFVFARDPDEDGQC 439 Query: 170 PAGSLCPRPHTTDSA 184 PAG LC P T DSA Sbjct: 440 PAGQLCLDPGTNDSA 454 >gi|125628665 hypothetical protein LOC388284 [Homo sapiens] Length = 317 Score = 33.5 bits (75), Expect = 0.16 Identities = 30/114 (26%), Positives = 50/114 (43%), Gaps = 12/114 (10%) Query: 9 PGGVFSPGRPSVSCDTPIPAASAQRGTKNRESYPSSAFQPPNPRQEGARLGWDRSQPHFR 68 PG + P +PA A RGT++ + P+ A ++EG +LG +R +PH Sbjct: 27 PGSAQTSECPVAGDQFLVPAHEA-RGTQSEDQRPAGAASESELQEEGPKLGEERPKPHAG 85 Query: 69 RL--HSPPGSDPFQQPPSRPINAAARSASRGDILAKTGIKSEIQALEAKAAVPP 120 L P +P P +S L+ G+++ L+A+A +PP Sbjct: 86 ALEERGPRPVVSIVRPRHGPKRKPVKS------LSLPGLRAH---LKAEAELPP 130 Database: hs.faa Posted date: Aug 4, 2009 4:42 PM Number of letters in database: 18,247,518 Number of sequences in database: 37,866 Lambda K H 0.315 0.133 0.417 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 12,477,029 Number of Sequences: 37866 Number of extensions: 755256 Number of successful extensions: 3939 Number of sequences better than 10.0: 30 Number of HSP's better than 10.0 without gapping: 44 Number of HSP's successfully gapped in prelim test: 203 Number of HSP's that attempted gapping in prelim test: 3510 Number of HSP's gapped (non-prelim): 645 length of query: 235 length of database: 18,247,518 effective HSP length: 99 effective length of query: 136 effective length of database: 14,498,784 effective search space: 1971834624 effective search space used: 1971834624 T: 11 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.5 bits) S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.