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Search of human proteins with 169214652
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169214652 PREDICTED: hypothetical protein [Homo sapiens]
(197 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169214732 PREDICTED: hypothetical protein [Homo sapiens] 413 e-116
gi|169214966 PREDICTED: hypothetical protein [Homo sapiens] 413 e-116
gi|169214652 PREDICTED: hypothetical protein [Homo sapiens] 413 e-116
gi|40556370 PHD finger protein 15 [Homo sapiens] 38 0.005
gi|169169586 PREDICTED: hypothetical protein [Homo sapiens] 37 0.014
gi|58761548 tau tubulin kinase 1 [Homo sapiens] 36 0.024
gi|37537687 zinc finger protein 444 [Homo sapiens] 36 0.024
gi|213972621 ATPase type 13A2 isoform 3 [Homo sapiens] 34 0.070
gi|158420731 chromodomain helicase DNA binding protein 3 isoform... 33 0.12
gi|78042577 MAP7 domain containing 1 [Homo sapiens] 33 0.12
gi|169164483 PREDICTED: hypothetical protein [Homo sapiens] 33 0.16
gi|113414226 PREDICTED: hypothetical protein [Homo sapiens] 33 0.16
gi|113413437 PREDICTED: hypothetical protein [Homo sapiens] 33 0.16
gi|239753555 PREDICTED: hypothetical protein XP_002345695 [Homo ... 33 0.20
gi|239747812 PREDICTED: ankyrin repeat domain 36 [Homo sapiens] 33 0.20
gi|239741753 PREDICTED: hypothetical protein [Homo sapiens] 33 0.20
gi|239752942 PREDICTED: hypothetical protein [Homo sapiens] 32 0.27
gi|239747476 PREDICTED: hypothetical protein XP_002347543 [Homo ... 32 0.27
gi|239741348 PREDICTED: hypothetical protein XP_002342180 [Homo ... 32 0.27
gi|150010572 SH3 domain containing ring finger 3 [Homo sapiens] 32 0.27
gi|105554437 forkhead box B1 [Homo sapiens] 32 0.27
gi|239755304 PREDICTED: hypothetical protein XP_002344521 [Homo ... 32 0.35
gi|239752594 PREDICTED: hypothetical protein, partial [Homo sapi... 32 0.35
gi|239749797 PREDICTED: hypothetical protein XP_002347167 [Homo ... 32 0.35
gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo ... 32 0.35
gi|239744069 PREDICTED: hypothetical protein XP_002344285 [Homo ... 32 0.35
gi|21361825 G protein-coupled receptor 137 [Homo sapiens] 32 0.35
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens] 32 0.35
gi|60593054 hypothetical protein LOC494514 [Homo sapiens] 32 0.35
gi|222136684 prickle homolog 1 [Homo sapiens] 32 0.46
>gi|169214732 PREDICTED: hypothetical protein [Homo sapiens]
Length = 197
Score = 413 bits (1062), Expect = e-116
Identities = 197/197 (100%), Positives = 197/197 (100%)
Query: 1 MPSGSAPGFTLTLTTAGNQSQGNREFVESAKLGNKSRSGELLRRSWLLGVSRRTGGPGLT 60
MPSGSAPGFTLTLTTAGNQSQGNREFVESAKLGNKSRSGELLRRSWLLGVSRRTGGPGLT
Sbjct: 1 MPSGSAPGFTLTLTTAGNQSQGNREFVESAKLGNKSRSGELLRRSWLLGVSRRTGGPGLT 60
Query: 61 GGAGRARILTPQRVSRLETSALGVRCQRPSSPLCCRLLFWLHRSPHSRPSVPRATTGRNR 120
GGAGRARILTPQRVSRLETSALGVRCQRPSSPLCCRLLFWLHRSPHSRPSVPRATTGRNR
Sbjct: 61 GGAGRARILTPQRVSRLETSALGVRCQRPSSPLCCRLLFWLHRSPHSRPSVPRATTGRNR 120
Query: 121 ALPLQCPPPGGTSASLRRVRPTRAGERLCICRNEGLLCQSQGHARDTRSPPGRHPARPGP 180
ALPLQCPPPGGTSASLRRVRPTRAGERLCICRNEGLLCQSQGHARDTRSPPGRHPARPGP
Sbjct: 121 ALPLQCPPPGGTSASLRRVRPTRAGERLCICRNEGLLCQSQGHARDTRSPPGRHPARPGP 180
Query: 181 RHLPGLPPAGRCLCSAH 197
RHLPGLPPAGRCLCSAH
Sbjct: 181 RHLPGLPPAGRCLCSAH 197
>gi|169214966 PREDICTED: hypothetical protein [Homo sapiens]
Length = 197
Score = 413 bits (1062), Expect = e-116
Identities = 197/197 (100%), Positives = 197/197 (100%)
Query: 1 MPSGSAPGFTLTLTTAGNQSQGNREFVESAKLGNKSRSGELLRRSWLLGVSRRTGGPGLT 60
MPSGSAPGFTLTLTTAGNQSQGNREFVESAKLGNKSRSGELLRRSWLLGVSRRTGGPGLT
Sbjct: 1 MPSGSAPGFTLTLTTAGNQSQGNREFVESAKLGNKSRSGELLRRSWLLGVSRRTGGPGLT 60
Query: 61 GGAGRARILTPQRVSRLETSALGVRCQRPSSPLCCRLLFWLHRSPHSRPSVPRATTGRNR 120
GGAGRARILTPQRVSRLETSALGVRCQRPSSPLCCRLLFWLHRSPHSRPSVPRATTGRNR
Sbjct: 61 GGAGRARILTPQRVSRLETSALGVRCQRPSSPLCCRLLFWLHRSPHSRPSVPRATTGRNR 120
Query: 121 ALPLQCPPPGGTSASLRRVRPTRAGERLCICRNEGLLCQSQGHARDTRSPPGRHPARPGP 180
ALPLQCPPPGGTSASLRRVRPTRAGERLCICRNEGLLCQSQGHARDTRSPPGRHPARPGP
Sbjct: 121 ALPLQCPPPGGTSASLRRVRPTRAGERLCICRNEGLLCQSQGHARDTRSPPGRHPARPGP 180
Query: 181 RHLPGLPPAGRCLCSAH 197
RHLPGLPPAGRCLCSAH
Sbjct: 181 RHLPGLPPAGRCLCSAH 197
>gi|169214652 PREDICTED: hypothetical protein [Homo sapiens]
Length = 197
Score = 413 bits (1062), Expect = e-116
Identities = 197/197 (100%), Positives = 197/197 (100%)
Query: 1 MPSGSAPGFTLTLTTAGNQSQGNREFVESAKLGNKSRSGELLRRSWLLGVSRRTGGPGLT 60
MPSGSAPGFTLTLTTAGNQSQGNREFVESAKLGNKSRSGELLRRSWLLGVSRRTGGPGLT
Sbjct: 1 MPSGSAPGFTLTLTTAGNQSQGNREFVESAKLGNKSRSGELLRRSWLLGVSRRTGGPGLT 60
Query: 61 GGAGRARILTPQRVSRLETSALGVRCQRPSSPLCCRLLFWLHRSPHSRPSVPRATTGRNR 120
GGAGRARILTPQRVSRLETSALGVRCQRPSSPLCCRLLFWLHRSPHSRPSVPRATTGRNR
Sbjct: 61 GGAGRARILTPQRVSRLETSALGVRCQRPSSPLCCRLLFWLHRSPHSRPSVPRATTGRNR 120
Query: 121 ALPLQCPPPGGTSASLRRVRPTRAGERLCICRNEGLLCQSQGHARDTRSPPGRHPARPGP 180
ALPLQCPPPGGTSASLRRVRPTRAGERLCICRNEGLLCQSQGHARDTRSPPGRHPARPGP
Sbjct: 121 ALPLQCPPPGGTSASLRRVRPTRAGERLCICRNEGLLCQSQGHARDTRSPPGRHPARPGP 180
Query: 181 RHLPGLPPAGRCLCSAH 197
RHLPGLPPAGRCLCSAH
Sbjct: 181 RHLPGLPPAGRCLCSAH 197
>gi|40556370 PHD finger protein 15 [Homo sapiens]
Length = 790
Score = 38.1 bits (87), Expect = 0.005
Identities = 31/93 (33%), Positives = 37/93 (39%), Gaps = 12/93 (12%)
Query: 103 RSPHSRPSVP-RATTGRNRALPLQC--PPPGGTSASLRRVRPTRAGERLCICRNEGLLCQ 159
R P RP P R GR R LP + PPP R P +A ++ Q
Sbjct: 581 RDPSLRPGDPARKARGRTR-LPAKKKPPPPPPQDGPGSRTTPDKAPKKTW--------GQ 631
Query: 160 SQGHARDTRSPPGRHPARPGPRHLPGLPPAGRC 192
G + + PP R P R HLP P AG C
Sbjct: 632 DAGSGKGGQGPPTRKPPRRTSSHLPSSPAAGDC 664
>gi|169169586 PREDICTED: hypothetical protein [Homo sapiens]
Length = 251
Score = 36.6 bits (83), Expect = 0.014
Identities = 48/152 (31%), Positives = 56/152 (36%), Gaps = 24/152 (15%)
Query: 50 VSRRTGGPGLTGGAGRARILTPQRVSRLETSALGVRCQRPSSPLCC-RLLFWLHRSP--- 105
+ +R G GG G+ R R T A R RP PLC R +SP
Sbjct: 2 IRKRPHQQGGGGGGGQGRHRHSSRAPGTRTPATPARSPRP--PLCAPRPAPGRAQSPVPA 59
Query: 106 -HSRPSVPRATTGRNRALPLQCPPPGGTSASLRRVRPTRAGERLCICR----NEGLLCQS 160
+ PS P A AL + P PG RR R T GE R + L
Sbjct: 60 AGAVPSPPAAAHPARPALRGETPAPG------RRGRATTRGEVQPSVRPPLSHRPLRGGG 113
Query: 161 QGHARDTRSPPGRHPARPGP-RHLPGLPPAGR 191
G R + PP P P R LP PP GR
Sbjct: 114 MGRGRPGKGPP------PNPSRRLPPAPPGGR 139
>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
Length = 1321
Score = 35.8 bits (81), Expect = 0.024
Identities = 44/154 (28%), Positives = 59/154 (38%), Gaps = 38/154 (24%)
Query: 57 PGLTGGAGRARILTPQRVSRLETSALGVRCQRPSSPLCCRLLFWLHRSPHSRPSVPRATT 116
P +G A R P+ + + V Q+P+S RS + P++ A T
Sbjct: 1143 PRKSGRAAATRSRIPRPIGL--RMPMPVAAQQPAS-----------RSHGAAPALDTAIT 1189
Query: 117 GRNRALPLQCPPPGGTSASLRRVRP---------TRAGER------------LCICRNEG 155
R L LQ PP T+A LR +P +AG R RN
Sbjct: 1190 SR---LQLQTPPGSATAADLRPKQPPGRGLGPGRAQAGARPPAPRSPRLPASTSAARNAS 1246
Query: 156 LLCQSQGHARDTRSPPGRHPARPGPRHLPGLPPA 189
+SQ +R SP H ARPG G+PPA
Sbjct: 1247 ASPRSQSLSR-RESPSPSHQARPGVPPPRGVPPA 1279
>gi|37537687 zinc finger protein 444 [Homo sapiens]
Length = 327
Score = 35.8 bits (81), Expect = 0.024
Identities = 42/147 (28%), Positives = 52/147 (35%), Gaps = 15/147 (10%)
Query: 54 TGGPGLTGGAGRARILTPQRVSRLETSALGVRCQRPSSPLCCRLLFWLHRSPHSRPSVPR 113
T GPG TGG + ++ L +A G P R SP P +P
Sbjct: 118 TQGPGATGGKEDSGMIP------LAGTAPGAEGPAPGDSQAVRPYKQEPSSPPLAPGLPA 171
Query: 114 ATTGRNRALPLQCPPPGGTS---ASLRRVRPTRAGERLCICRNEGLLCQSQGHARDTRSP 170
CP G TS A L R R + +GE+ C G + + H R R
Sbjct: 172 FLAAPGTT---SCPECGKTSLKPAHLLRHRQSHSGEKPHACPECGKAFRRKEHLRRHRDT 228
Query: 171 PGRHPARPGP--RHLPGL-PPAGRCLC 194
P PGP R LP P C C
Sbjct: 229 HPGSPGSPGPALRPLPAREKPHACCEC 255
>gi|213972621 ATPase type 13A2 isoform 3 [Homo sapiens]
Length = 1158
Score = 34.3 bits (77), Expect = 0.070
Identities = 27/91 (29%), Positives = 35/91 (38%), Gaps = 5/91 (5%)
Query: 112 PRATTGRNRALPLQCPPPGGTSASLR---RVRPTRAGERL--CICRNEGLLCQSQGHARD 166
P T R R +P + P P A L+ + TRAG R + Q+ GH R
Sbjct: 1030 PLYTNERARPVPPRLPAPPPAQAGLQEALQAAGTRAGRAALAAAARRPPEVVQAHGHPRH 1089
Query: 167 TRSPPGRHPARPGPRHLPGLPPAGRCLCSAH 197
S P H P P P PP L + +
Sbjct: 1090 WNSLPLSHQLDPSPATPPPPPPTSLRLATVY 1120
>gi|158420731 chromodomain helicase DNA binding protein 3 isoform 3
[Homo sapiens]
Length = 2059
Score = 33.5 bits (75), Expect = 0.12
Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 2/38 (5%)
Query: 153 NEGLLCQSQGH--ARDTRSPPGRHPARPGPRHLPGLPP 188
+EG+L + GH RD SPPG H P P P LPP
Sbjct: 48 DEGVLGRGPGHDRGRDRHSPPGCHLFPPPPPPPPPLPP 85
>gi|78042577 MAP7 domain containing 1 [Homo sapiens]
Length = 841
Score = 33.5 bits (75), Expect = 0.12
Identities = 37/119 (31%), Positives = 48/119 (40%), Gaps = 14/119 (11%)
Query: 73 RVSRLETSALGVRCQ-RPSSPLCCRLLFWLHRSPHSRPSVPRATTGRNRALPLQCPPPGG 131
R+S S L + + RPSSP + RP+ P + G LP + P P G
Sbjct: 450 RLSASTASELSPKSKARPSSP----------STSWHRPASPCPSPGPGHTLPPKPPSPRG 499
Query: 132 TSASLR-RVRPTRAGERLCICRNEGLLCQSQGHARDTRSPPGRHPARPGPRHLPGLPPA 189
T+AS + RVR R E G +SQ R + PA P P P PA
Sbjct: 500 TTASPKGRVR--RKEEAKESPSAAGPEDKSQSKRRASNEKESAAPASPAPSPAPSPTPA 556
>gi|169164483 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 33.1 bits (74), Expect = 0.16
Identities = 20/54 (37%), Positives = 23/54 (42%)
Query: 137 RRVRPTRAGERLCICRNEGLLCQSQGHARDTRSPPGRHPARPGPRHLPGLPPAG 190
RR R TR G R R +G R T +PP R PGPR P +G
Sbjct: 170 RRPRGTRGGARRPGVRGQGAAAVGPTGPRPTGAPPSRRTPPPGPRRPLRSPHSG 223
>gi|113414226 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 33.1 bits (74), Expect = 0.16
Identities = 20/54 (37%), Positives = 23/54 (42%)
Query: 137 RRVRPTRAGERLCICRNEGLLCQSQGHARDTRSPPGRHPARPGPRHLPGLPPAG 190
RR R TR G R R +G R T +PP R PGPR P +G
Sbjct: 170 RRPRGTRGGARRPGVRGQGAAAVGPTGPRPTGAPPSRRTPPPGPRRPLRSPHSG 223
>gi|113413437 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 33.1 bits (74), Expect = 0.16
Identities = 20/54 (37%), Positives = 23/54 (42%)
Query: 137 RRVRPTRAGERLCICRNEGLLCQSQGHARDTRSPPGRHPARPGPRHLPGLPPAG 190
RR R TR G R R +G R T +PP R PGPR P +G
Sbjct: 170 RRPRGTRGGARRPGVRGQGAAAVGPTGPRPTGAPPSRRTPPPGPRRPLRSPHSG 223
>gi|239753555 PREDICTED: hypothetical protein XP_002345695 [Homo
sapiens]
Length = 258
Score = 32.7 bits (73), Expect = 0.20
Identities = 37/125 (29%), Positives = 49/125 (39%), Gaps = 38/125 (30%)
Query: 103 RSPHSRPSVPRATTG--RNRALPLQCP------------------PPGGTSASLRR--VR 140
R+P + PS R T G R+R+ L CP PPG + LRR
Sbjct: 106 RAPAAPPSASRPTRGGTRHRSRTLYCPLDQKQWPSRKRERPRLPPPPGSRKSRLRRWARA 165
Query: 141 PTRAGE------RLC--ICRNEGL-LCQSQ-------GHARDTRSPPGRHPARPGPRHLP 184
GE RLC CR G L ++Q GH+R ++ P P+ PG
Sbjct: 166 SPHPGELAGLTSRLCPATCRGRGRGLARAQATHIPLSGHSRGIQTRPSSTPSPPGVLGKD 225
Query: 185 GLPPA 189
PP+
Sbjct: 226 TQPPS 230
>gi|239747812 PREDICTED: ankyrin repeat domain 36 [Homo sapiens]
Length = 753
Score = 32.7 bits (73), Expect = 0.20
Identities = 44/149 (29%), Positives = 54/149 (36%), Gaps = 14/149 (9%)
Query: 50 VSRRTGGPGLTGGAGRARILTPQRVSRLETSALG--VRCQRPSSPLCCRLL------FWL 101
V R+ G GL G AR L P + A+ R P L CRL W
Sbjct: 133 VCGRSAGHGLPPGVQEARTLRPDGGALRAQEAIPREPRQPPPEPELQCRLQVVRWLQLWQ 192
Query: 102 HRSPHSRPSVPRATTGRNRALPLQCPPPGGT-SASLRRVRPTRAGERLCICRNEGLLCQS 160
R P SR + A G + C P GGT S + P A + G L +
Sbjct: 193 PRIPSSRLAPISADPGGDAVAKWGCGPSGGTRRRSTTQPHPWAAEGPARGTPSVGSLWKR 252
Query: 161 QGHARDTRSPPGRHPARPGPRHLPGLPPA 189
+ R P GR AR L G PP+
Sbjct: 253 RARGRQLNRPWGR--ARLA---LQGAPPS 276
>gi|239741753 PREDICTED: hypothetical protein [Homo sapiens]
Length = 274
Score = 32.7 bits (73), Expect = 0.20
Identities = 48/169 (28%), Positives = 58/169 (34%), Gaps = 57/169 (33%)
Query: 28 ESAKLGNKSRSGELLRRSWLLGVSRRTGGPGLTGGAGRARILTPQRVSRLETSALGVRCQ 87
E + LG ++ E RR+ RR GG G GGAG + L QR S L + +
Sbjct: 24 EKSSLG-RAAGVESRRRAGEGAAGRRDGGWGPPGGAGDHQTL--QRASLLPGGSADKDQE 80
Query: 88 RPSSPLCCRLLFWLHRSPHSRPSVPRATTGRNRALPLQCPPPGGTSASLRRVRPTRAGER 147
R S L + P+ PR + LP CPP
Sbjct: 81 REPS---------LAARGTAPPAPPR------QCLPTPCPP------------------- 106
Query: 148 LCICRNEGLLCQSQGHARDTRSPPGRHPAR------PGPRHL-PGLPPA 189
GH R PPG P R PGPR L P PPA
Sbjct: 107 -------------LGHGLRPRPPPGTPPPRCPRTLAPGPRGLFPAPPPA 142
>gi|239752942 PREDICTED: hypothetical protein [Homo sapiens]
Length = 278
Score = 32.3 bits (72), Expect = 0.27
Identities = 41/152 (26%), Positives = 52/152 (34%), Gaps = 34/152 (22%)
Query: 65 RARILTPQRVSRLETSALGVRCQRPSSPLCCRL-------LFWLHRSPHSRPSVPRATTG 117
R R+L P+ V C +PS L C L L WLHR H P A G
Sbjct: 70 RERVLEPENVG----------CSQPSPALPCALPGPTPSWLTWLHRRLHHAPGAAPALPG 119
Query: 118 RNRALPLQCPP------PGGTSASLRRVRPTRAGERLCICRNEGLLCQSQGHARDTRSPP 171
+ LP + P G +V RA + E C + R ++PP
Sbjct: 120 -DEVLPERLQPVRHQGVEGRAEGGQHQVPHIRAQPAITQLGLEVARC--RWLQRSLQTPP 176
Query: 172 GR-HPARPGP-------RHLPGLPPAGRCLCS 195
P P P H LPPA C+
Sbjct: 177 SHLPPTIPAPPAELHYSPHPNSLPPATFTFCT 208
>gi|239747476 PREDICTED: hypothetical protein XP_002347543 [Homo
sapiens]
Length = 278
Score = 32.3 bits (72), Expect = 0.27
Identities = 41/152 (26%), Positives = 52/152 (34%), Gaps = 34/152 (22%)
Query: 65 RARILTPQRVSRLETSALGVRCQRPSSPLCCRL-------LFWLHRSPHSRPSVPRATTG 117
R R+L P+ V C +PS L C L L WLHR H P A G
Sbjct: 70 RERVLEPENVG----------CSQPSPALPCALPGPTPSWLTWLHRRLHHAPGAAPALPG 119
Query: 118 RNRALPLQCPP------PGGTSASLRRVRPTRAGERLCICRNEGLLCQSQGHARDTRSPP 171
+ LP + P G +V RA + E C + R ++PP
Sbjct: 120 -DEVLPERLQPVRHQGVEGRAEGGQHQVPHIRAQPAITQLGLEVARC--RWLQRSLQTPP 176
Query: 172 GR-HPARPGP-------RHLPGLPPAGRCLCS 195
P P P H LPPA C+
Sbjct: 177 SHLPPTIPAPPAELHYSPHPNSLPPATFTFCT 208
>gi|239741348 PREDICTED: hypothetical protein XP_002342180 [Homo
sapiens]
Length = 278
Score = 32.3 bits (72), Expect = 0.27
Identities = 41/152 (26%), Positives = 52/152 (34%), Gaps = 34/152 (22%)
Query: 65 RARILTPQRVSRLETSALGVRCQRPSSPLCCRL-------LFWLHRSPHSRPSVPRATTG 117
R R+L P+ V C +PS L C L L WLHR H P A G
Sbjct: 70 RERVLEPENVG----------CSQPSPALPCALPGPTPSWLTWLHRRLHHAPGAAPALPG 119
Query: 118 RNRALPLQCPP------PGGTSASLRRVRPTRAGERLCICRNEGLLCQSQGHARDTRSPP 171
+ LP + P G +V RA + E C + R ++PP
Sbjct: 120 -DEVLPERLQPVRHQGVEGRAEGGQHQVPHIRAQPAITQLGLEVARC--RWLQRSLQTPP 176
Query: 172 GR-HPARPGP-------RHLPGLPPAGRCLCS 195
P P P H LPPA C+
Sbjct: 177 SHLPPTIPAPPAELHYSPHPNSLPPATFTFCT 208
>gi|150010572 SH3 domain containing ring finger 3 [Homo sapiens]
Length = 882
Score = 32.3 bits (72), Expect = 0.27
Identities = 51/183 (27%), Positives = 64/183 (34%), Gaps = 32/183 (17%)
Query: 33 GNKSRSGELLRRSWLLGVSRRTGGPGLTGGAGRARILTPQRVSRLETSALGVRCQR--PS 90
G R E + W G S RTG G+ G +TP VSR+ G
Sbjct: 488 GEMYRVLEKCQDGWFKGASLRTGVSGVFPG----NYVTP--VSRVPAGGAGPPRNNVVGG 541
Query: 91 SPLCCRLLFWLHRSPHS--------RPSVPRATTGRNRALPLQCPPPGGTSASLRRVRPT 142
SPL + +H S RP++P T + P PP G S +PT
Sbjct: 542 SPLAKGITTTMHPGSGSLSSLATATRPALPITTPQAHAQHPTASPPTG--SCLRHSAQPT 599
Query: 143 RAGERLCICRNEGLLCQSQGHARDTRSP------PGRHPA---RP----GPRHLPGLPPA 189
+ R I Q+Q T SP P R PA RP P+H PP
Sbjct: 600 ASQARSTISTAAHSAAQAQDRPTATVSPLRTQNSPSRLPATSLRPHSVVSPQH-SHQPPV 658
Query: 190 GRC 192
C
Sbjct: 659 QMC 661
>gi|105554437 forkhead box B1 [Homo sapiens]
Length = 325
Score = 32.3 bits (72), Expect = 0.27
Identities = 32/99 (32%), Positives = 43/99 (43%), Gaps = 15/99 (15%)
Query: 48 LGVSRRTGGPGLTGGAGRARILTPQRVSRLETSALGVRCQRPSSPLCCRLLFWLHRSPHS 107
+G S TG P + G AG TP ++ + SA GV P PLC H + +
Sbjct: 207 MGSSLGTGWPHVYGSAGMIDSATPISMASGDYSAYGV----PLKPLC-------HAAGQT 255
Query: 108 RPSVP---RATTGRNRALP-LQCPPPGGTSASLRRVRPT 142
P++P + T ALP L P P S S + PT
Sbjct: 256 LPAIPVPIKPTPAAVPALPALPAPIPTLLSNSPPSLSPT 294
>gi|239755304 PREDICTED: hypothetical protein XP_002344521 [Homo
sapiens]
Length = 209
Score = 32.0 bits (71), Expect = 0.35
Identities = 30/105 (28%), Positives = 38/105 (36%), Gaps = 40/105 (38%)
Query: 105 PHSRPSVPRATTGRNRALPLQCPPPGGTSASLRRVRPTRAGERLCICRNEGLL------- 157
P P++PR ++ PPP G+ R RLC+ EG+L
Sbjct: 95 PLGGPALPRLSSPE--------PPPAGSDRDWRL--------RLCLREGEGVLWRRFPLT 138
Query: 158 ------------CQSQGHARDTRSPPGRHPARPGPRHLPGLPPAG 190
+G AR R PP R P RP PGLP G
Sbjct: 139 PPPSGSWACRVSAMGEGCARCLRLPPRRGPPRP-----PGLPYPG 178
>gi|239752594 PREDICTED: hypothetical protein, partial [Homo
sapiens]
Length = 673
Score = 32.0 bits (71), Expect = 0.35
Identities = 46/156 (29%), Positives = 61/156 (39%), Gaps = 16/156 (10%)
Query: 41 LLRRSWLLGVSRRTGGPGLTGGAGRARILTPQRVSRLETSALGVRCQRPS--SPLCCRLL 98
+L R+ G+ RT + A +R TP R S T + +PS SP
Sbjct: 307 MLPRASPTGMLSRTSLTKMDSTASISR--TPPRASITRTPSRASPTGKPSTASPTGTPS- 363
Query: 99 FWLHRSPHSRPSVPRATTGRNRALPLQCPP---PGGT--SASLRRVRPTRAGERLCICRN 153
SP PS T + A P PP P GT +ASL R +P RA + R
Sbjct: 364 ---RASPTGSPSTASLTGLSSTASPTGTPPRASPTGTPSTASLTR-KPPRASPTGMLSRT 419
Query: 154 EGLLCQSQGHARDTRSPPGRHPARPGPRHLPGLPPA 189
+ + A TR+PP P PR P P+
Sbjct: 420 S--ITKMDSTASPTRTPPRASPTGTPPRASPTGTPS 453
Score = 31.2 bits (69), Expect = 0.60
Identities = 44/188 (23%), Positives = 66/188 (35%), Gaps = 31/188 (16%)
Query: 2 PSGSAPGFTLTLTTAGNQSQGNREFVESAKLGNKSRSGELLRRSWLLGVSRRTGGPGLTG 61
P+GS +LT T S+ + +ES + +R+ +W + TG P
Sbjct: 484 PTGSPSRASLTRTP----SRASLTKMEST--ASITRTPSRASPTWTPSTASPTGSPSTAL 537
Query: 62 GAGRARILTPQRVSRLETSALGVRCQRPSSPLCCRLLFWLHRSPHSRPSVPRATTGRNRA 121
G +P R + T + + PS R+ + PS T +
Sbjct: 538 AMG-----SPSRAALTRTPSRASLTRTPS------------RASLTTPSRASLTRTPSTV 580
Query: 122 LPLQCPPPGGTSASLRRVRPTRAGERLCICRNEGLLCQSQGHARDTRSPPGRHPARPGPR 181
L + PP + R PT + LL + A TR+PP P PR
Sbjct: 581 LLTRMPPSASPTGMPSRTSPTGMP-------SSALLTKMDSTASITRTPPRASPTETPPR 633
Query: 182 HLP-GLPP 188
P G PP
Sbjct: 634 ASPTGTPP 641
>gi|239749797 PREDICTED: hypothetical protein XP_002347167 [Homo
sapiens]
Length = 209
Score = 32.0 bits (71), Expect = 0.35
Identities = 30/105 (28%), Positives = 38/105 (36%), Gaps = 40/105 (38%)
Query: 105 PHSRPSVPRATTGRNRALPLQCPPPGGTSASLRRVRPTRAGERLCICRNEGLL------- 157
P P++PR ++ PPP G+ R RLC+ EG+L
Sbjct: 95 PLGGPALPRLSSPE--------PPPAGSDRDWRL--------RLCLREGEGVLWRRFPLT 138
Query: 158 ------------CQSQGHARDTRSPPGRHPARPGPRHLPGLPPAG 190
+G AR R PP R P RP PGLP G
Sbjct: 139 PPPSGSWACRVSAMGEGCARCLRLPPRRGPPRP-----PGLPYPG 178
>gi|239746104 PREDICTED: hypothetical protein XP_002344198 [Homo
sapiens]
Length = 398
Score = 32.0 bits (71), Expect = 0.35
Identities = 38/137 (27%), Positives = 53/137 (38%), Gaps = 11/137 (8%)
Query: 56 GPGLTGGAG--RARILTPQRVSRLETSALGVRCQRPSSPLCCRLLFWLHRSPHSRPSVPR 113
GPG GG ++R P+ E + +G R + P+ P R + + V
Sbjct: 69 GPGAPGGQQLRKSRARLPRTRQGREDAGVGRRNRDPAEPGSLRPTSLGFPARAGQGRVQG 128
Query: 114 ATTGRN-RALPLQCPPPGGTSASLRRVRPTRAGERLCICRNEGLLCQSQGHARDTRSPPG 172
A GR R P P G S +R + AG R ++ + R+ PP
Sbjct: 129 AAPGRKLRGEPKTPPGRSGPSGGVR----SGAGHRAAAAEHQ---LGAGFSVRNGPGPPA 181
Query: 173 R-HPARPGPRHLPGLPP 188
R PA PGP P PP
Sbjct: 182 RLPPAPPGPLLRPARPP 198
>gi|239744069 PREDICTED: hypothetical protein XP_002344285 [Homo
sapiens]
Length = 209
Score = 32.0 bits (71), Expect = 0.35
Identities = 30/105 (28%), Positives = 38/105 (36%), Gaps = 40/105 (38%)
Query: 105 PHSRPSVPRATTGRNRALPLQCPPPGGTSASLRRVRPTRAGERLCICRNEGLL------- 157
P P++PR ++ PPP G+ R RLC+ EG+L
Sbjct: 95 PLGGPALPRLSSPE--------PPPAGSDRDWRL--------RLCLREGEGVLWRRFPLT 138
Query: 158 ------------CQSQGHARDTRSPPGRHPARPGPRHLPGLPPAG 190
+G AR R PP R P RP PGLP G
Sbjct: 139 PPPSGSWACRVSAMGEGCARCLRLPPRRGPPRP-----PGLPYPG 178
>gi|21361825 G protein-coupled receptor 137 [Homo sapiens]
Length = 417
Score = 32.0 bits (71), Expect = 0.35
Identities = 17/44 (38%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Query: 152 RNEGLLCQSQGHARDTRSPPGRHPARPGPRHLPG-LPPAGRCLC 194
R E CQ Q +PP R P P PG PP R LC
Sbjct: 339 RGESTRCQDQAATTTVSTPPHRRDPPPSPTEYPGPSPPHPRPLC 382
>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
Length = 904
Score = 32.0 bits (71), Expect = 0.35
Identities = 29/90 (32%), Positives = 36/90 (40%), Gaps = 12/90 (13%)
Query: 104 SPHSRPSVPRATTGRNRALPLQCPPPGGTSASLRRVRPTRAGERLCICRNEGLL--CQSQ 161
SP RPS R + R R P + PPP S VR R R+ L S
Sbjct: 310 SPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRR--------RSSASLSGSSSS 361
Query: 162 GHARDTRSPPGRHPARPG--PRHLPGLPPA 189
+ +RSPP + P R PR L P+
Sbjct: 362 SSSSRSRSPPKKPPKRTSSPPRKTRRLSPS 391
>gi|60593054 hypothetical protein LOC494514 [Homo sapiens]
Length = 123
Score = 32.0 bits (71), Expect = 0.35
Identities = 17/35 (48%), Positives = 19/35 (54%), Gaps = 8/35 (22%)
Query: 168 RSPPGRHPARPGP-RHLPG-------LPPAGRCLC 194
R PP RHP+R GP RHL G +P RC C
Sbjct: 85 RLPPSRHPSRRGPRRHLSGCSAPACRIPTGCRCPC 119
>gi|222136684 prickle homolog 1 [Homo sapiens]
Length = 831
Score = 31.6 bits (70), Expect = 0.46
Identities = 23/64 (35%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
Query: 19 QSQGNREFVESAKLGNKSRSGELLRRSWLLGVSRRTGGPGLTGGAG--RARILTPQRVSR 76
QS +R+ S ++G SRS + R+S LL + PGL+G A +R L +SR
Sbjct: 323 QSARSRDSRRSVRMGKSSRSADQCRQSLLLSPALNYKFPGLSGNADDTLSRKLDDLSLSR 382
Query: 77 LETS 80
TS
Sbjct: 383 QGTS 386
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.320 0.136 0.441
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,049,076
Number of Sequences: 37866
Number of extensions: 644342
Number of successful extensions: 3149
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 157
Number of HSP's that attempted gapping in prelim test: 2988
Number of HSP's gapped (non-prelim): 324
length of query: 197
length of database: 18,247,518
effective HSP length: 97
effective length of query: 100
effective length of database: 14,574,516
effective search space: 1457451600
effective search space used: 1457451600
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.