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Search of human proteins with 112734859
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|112734859 zinc finger protein 654 [Homo sapiens]
(581 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|112734859 zinc finger protein 654 [Homo sapiens] 1196 0.0
gi|150170718 zinc finger protein 292 [Homo sapiens] 134 2e-31
gi|157671949 rearranged L-myc fusion [Homo sapiens] 88 2e-17
gi|138175817 zinc finger protein 236 [Homo sapiens] 59 2e-08
gi|91822911 JAZF zinc finger 1 [Homo sapiens] 55 2e-07
gi|119393899 GLI-Kruppel family member GLI3 [Homo sapiens] 53 7e-07
gi|90193619 nuclear matrix transcription factor 4 isoform c [Hom... 51 3e-06
gi|90193617 nuclear matrix transcription factor 4 isoform b [Hom... 51 3e-06
gi|90193615 nuclear matrix transcription factor 4 isoform b [Hom... 51 3e-06
gi|90193613 nuclear matrix transcription factor 4 isoform a [Hom... 51 3e-06
gi|90193611 nuclear matrix transcription factor 4 isoform a [Hom... 51 3e-06
gi|36054194 nuclear matrix transcription factor 4 isoform a [Hom... 51 3e-06
gi|167234429 zinc finger and BTB domain containing 17 [Homo sapi... 51 3e-06
gi|223468695 zinc finger protein 572 [Homo sapiens] 50 4e-06
gi|38570115 zinc finger protein 362 [Homo sapiens] 50 4e-06
gi|21361146 zinc finger protein 76 (expressed in testis) [Homo s... 49 1e-05
gi|148596977 zinc finger protein 31 [Homo sapiens] 49 1e-05
gi|112790163 metal-regulatory transcription factor 1 [Homo sapiens] 49 2e-05
gi|116014328 zinc finger protein 143 [Homo sapiens] 49 2e-05
gi|14249488 zinc finger and SCAN domain containing 10 [Homo sapi... 49 2e-05
gi|84872173 zinc finger protein 131 [Homo sapiens] 48 3e-05
gi|4507955 YY1 transcription factor [Homo sapiens] 47 4e-05
gi|61743930 zinc finger and BTB domain containing 41 [Homo sapiens] 47 4e-05
gi|40807465 zinc finger protein 341 [Homo sapiens] 47 4e-05
gi|110431364 GLIS family zinc finger 2 [Homo sapiens] 47 4e-05
gi|209180475 nuclear matrix transcription factor 4 isoform d [Ho... 47 5e-05
gi|150170667 zinc finger protein 471 [Homo sapiens] 47 5e-05
gi|55741868 zinc finger protein 319 [Homo sapiens] 47 5e-05
gi|229892345 GLI family zinc finger 1 isoform 2 [Homo sapiens] 46 8e-05
gi|4885279 GLI family zinc finger 1 isoform 1 [Homo sapiens] 46 8e-05
>gi|112734859 zinc finger protein 654 [Homo sapiens]
Length = 581
Score = 1196 bits (3093), Expect = 0.0
Identities = 581/581 (100%), Positives = 581/581 (100%)
Query: 1 MLCNKEFLGGHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNHVKKIQRQQIAAAQ 60
MLCNKEFLGGHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNHVKKIQRQQIAAAQ
Sbjct: 1 MLCNKEFLGGHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNHVKKIQRQQIAAAQ 60
Query: 61 QDDQEVTALEEINCSSSSISFENGNSDSKDLEVETLTASSEGNKEVIPEHVAEFIEIPIS 120
QDDQEVTALEEINCSSSSISFENGNSDSKDLEVETLTASSEGNKEVIPEHVAEFIEIPIS
Sbjct: 61 QDDQEVTALEEINCSSSSISFENGNSDSKDLEVETLTASSEGNKEVIPEHVAEFIEIPIS 120
Query: 121 VPEDVIENVIENGSPNNSLNNVFKPLTECGDDYEEEEDEEGDYEEDDYDLNQETSVIHKI 180
VPEDVIENVIENGSPNNSLNNVFKPLTECGDDYEEEEDEEGDYEEDDYDLNQETSVIHKI
Sbjct: 121 VPEDVIENVIENGSPNNSLNNVFKPLTECGDDYEEEEDEEGDYEEDDYDLNQETSVIHKI 180
Query: 181 NGTVCHPKDIYATDQEGNFKCPALGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKG 240
NGTVCHPKDIYATDQEGNFKCPALGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKG
Sbjct: 181 NGTVCHPKDIYATDQEGNFKCPALGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKG 240
Query: 241 KCKFCQRQFEDSQHFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQAQCS 300
KCKFCQRQFEDSQHFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQAQCS
Sbjct: 241 KCKFCQRQFEDSQHFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQAQCS 300
Query: 301 FPECHELFEDLPLLYEHEAQHYLSKTPESSAQPSETILWDVQTDSNPNQEKDSSSNEKQT 360
FPECHELFEDLPLLYEHEAQHYLSKTPESSAQPSETILWDVQTDSNPNQEKDSSSNEKQT
Sbjct: 301 FPECHELFEDLPLLYEHEAQHYLSKTPESSAQPSETILWDVQTDSNPNQEKDSSSNEKQT 360
Query: 361 ISLPVSTSKSRKESTEPKTCIESMEKKTDSLVQNGNERSDDTVSNISLIDQKMPDIEPNS 420
ISLPVSTSKSRKESTEPKTCIESMEKKTDSLVQNGNERSDDTVSNISLIDQKMPDIEPNS
Sbjct: 361 ISLPVSTSKSRKESTEPKTCIESMEKKTDSLVQNGNERSDDTVSNISLIDQKMPDIEPNS 420
Query: 421 ENNCSSSDIVNGHSEIEQTPLVSSDPALKIDTNRIRTENGSILPSVVPQEHNTLPVSQAP 480
ENNCSSSDIVNGHSEIEQTPLVSSDPALKIDTNRIRTENGSILPSVVPQEHNTLPVSQAP
Sbjct: 421 ENNCSSSDIVNGHSEIEQTPLVSSDPALKIDTNRIRTENGSILPSVVPQEHNTLPVSQAP 480
Query: 481 SKPNLTSEHTSYGLILTKPYVRPLPPSYLDERYLSMPKRRKFLTDRVDACSDQDNVYKKS 540
SKPNLTSEHTSYGLILTKPYVRPLPPSYLDERYLSMPKRRKFLTDRVDACSDQDNVYKKS
Sbjct: 481 SKPNLTSEHTSYGLILTKPYVRPLPPSYLDERYLSMPKRRKFLTDRVDACSDQDNVYKKS 540
Query: 541 VKRLRCGKCLTTYCNAEALEAHLAQKKCQTLFGFDSDDESA 581
VKRLRCGKCLTTYCNAEALEAHLAQKKCQTLFGFDSDDESA
Sbjct: 541 VKRLRCGKCLTTYCNAEALEAHLAQKKCQTLFGFDSDDESA 581
>gi|150170718 zinc finger protein 292 [Homo sapiens]
Length = 2723
Score = 134 bits (337), Expect = 2e-31
Identities = 117/469 (24%), Positives = 186/469 (39%), Gaps = 83/469 (17%)
Query: 1 MLCNKEFLGGHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNHVKKIQRQQIAAAQ 60
+LC+KEFLG IVRHAQ H K G ++C IC + F ++ H+ HVK+ ++++AA +
Sbjct: 545 VLCDKEFLGHRIVRHAQKHYKDGIYSCPICAKNFNSKETFVPHVTLHVKQSSKERLAAMK 604
Query: 61 QDDQEVTALEEINCSSSSISFENGNSDSKDLEVETLTASSEGNKEVIPEHVAEFIEIPIS 120
L + +T ++E K VA+ + PI
Sbjct: 605 P-------LRRLG------------------RPPKITTTNENQKT---NTVAKQEQRPIK 636
Query: 121 VPEDVIENVIENGSPNNSLNNVFKPLTECGDDYEEEEDEEG-DYEEDDYDLNQETSVIHK 179
NSL + D+ D +G D E DD D + E VI
Sbjct: 637 ---------------KNSLYST---------DFIVFNDNDGSDDENDDKDKSYEPEVI-- 670
Query: 180 INGTVCHPKDIYATDQEGNFKCPALGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSK 239
V P + F CP C + FK L H + R M+ K
Sbjct: 671 ---PVQKPVPV------NEFNCPVTFCKKGFKYFKNLIAHVKGHKDNEDAKRFLEMQSKK 721
Query: 240 GKCKFCQRQFEDSQHFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQAQC 299
C++C+R F H DHL H Y C+ C F +L H K H++F+A+C
Sbjct: 722 VICQYCRRHFVSVTHLNDHLQMHCGSKPYICIQMKCKAGFNSYAELLTHRKEHQVFRAKC 781
Query: 300 SFPECHELFEDLPLLYEHEAQHYLSKTPESSAQPSETILWDVQTDSNPNQEKDSSSNEKQ 359
FP+C +F + LLY+HEAQHY + T + + ++ + D S +
Sbjct: 782 MFPKCGRIFSEAYLLYDHEAQHYNTYTCKFTGCGKV-----YRSQGELEKHLDDHSTPPE 836
Query: 360 TISLPVSTSKSRKESTEP----KTCIESMEKKTDSLVQNGNERSDDTVSNISLIDQKMPD 415
+ P + S +S +P + E++EK+ L N + D+ +
Sbjct: 837 KVLPPEAQLNSSGDSIQPSEVNQNTAENIEKERSMLPSENNIENSLLADRSDAWDKSKAE 896
Query: 416 IEPNSENNCSSSD-------IVNGHSEIEQTPLVSSDP---ALKIDTNR 454
++ S+S+ + NG TPL+ S ++K+ N+
Sbjct: 897 SAVTKQDQISASELRQANGPLSNGLENPATTPLLQSSEVAVSIKVSLNQ 945
Score = 38.1 bits (87), Expect = 0.022
Identities = 46/206 (22%), Positives = 73/206 (35%), Gaps = 31/206 (15%)
Query: 199 FKCPALGCVRIFKRIGFLNKHAMTVH---PTDLNVRQTVMKWSKGKCKFCQRQFEDSQHF 255
F+C C RIF+ I L +H M +H P ++ + K C Q E F
Sbjct: 2172 FRCQVSDCSRIFQAITGLIQHYMKLHEMTPEEIESMTASVDVGKFPCD----QLECKSSF 2227
Query: 256 IDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQAQCSFPECHELFEDLPLLY 315
+LN + +H + L A T+ +++ C C ++ L
Sbjct: 2228 TTYLN--------YVVHLEADHGIGL---RASKTEEDGVYKCDCE--GCDRIYATRSNLL 2274
Query: 316 EHEAQHYLSKTPESSAQPSETILWDVQTDSNPNQEKDSSSNE--------KQTISLPVST 367
H + K +P S NQEK S + K+ I +P T
Sbjct: 2275 RHIFNKHNDKHKAHLIRPRRLTPGQENMSSKANQEKSKSKHRGTKHSRCGKEGIKMP-KT 2333
Query: 368 SKSRKESTEPKTC--IESMEKKTDSL 391
+ +K + E K ++ E K SL
Sbjct: 2334 KRKKKNNLENKNAKIVQIEENKPYSL 2359
>gi|157671949 rearranged L-myc fusion [Homo sapiens]
Length = 1914
Score = 87.8 bits (216), Expect = 2e-17
Identities = 76/355 (21%), Positives = 147/355 (41%), Gaps = 31/355 (8%)
Query: 104 KEVIPEHVAEFIEIPISVPEDVIENVIENGSPNNSLNNVFKPLTECGDDYEEEEDEEGDY 163
KE+ HV E +++P S + + ++ GS + E ++ E
Sbjct: 594 KEMFVPHVMEHVKMPPSRRDRSKKKLLLKGSQKGICPKSPSAIPEQNHSLNDQAKGE--- 650
Query: 164 EEDDYDLNQETSVIHKINGTVCHPKDIYATDQEGNFKCPALGCVRIFKRIGFLNKHAMTV 223
+ E K+ +D+Y CP C R+FK+ +L+ H
Sbjct: 651 -------SHEYVTFSKLEDCHLQDRDLYP--------CPGTDCSRVFKQFKYLSVHLKAE 695
Query: 224 HPT-DLNVRQTV-MKWSKGKCKFCQRQFEDSQHFIDHLNRHSYPNVYFCLHFNCNESFKL 281
H D N + + MK + KC +C+R F + H +H H P Y C+ +C F
Sbjct: 696 HQNNDENAKHYLDMKNRREKCTYCRRHFMSAFHLREHEQVHCGPQPYMCVSIDCYARFGS 755
Query: 282 PFQLAQHTKSHRIFQAQCSFPECHELFEDLPLLYEHEAQHYLSKTPESSAQPSETILW-- 339
+L H + H + +C C+ +F DL LY HEAQH+ + + + +
Sbjct: 756 VNELLNHKQKHDDLRYKCELNGCNIVFSDLGQLYHHEAQHFRDASYTCNFLGCKKFYYSK 815
Query: 340 -DVQTDSNPNQEKDSSSNEKQTISLPVSTSKSRKESTEPKTCIESMEKK--TDSL--VQN 394
+ Q + + ++S+ + K+++ L S + +++ + +K + L ++
Sbjct: 816 IEYQNHLSMHNVENSNGDIKKSVKLEESATGEKQDCINQPHLLNQTDKSHLPEDLFCAES 875
Query: 395 GNERSD-DTVSNI-SLIDQKMPDIEPNSENNCSSSDIVN--GHSEIEQTPLVSSD 445
N + D +T N+ D D +S + + ++++ HSE Q L+S++
Sbjct: 876 ANSQIDTETAENLKENSDSNSSDQLSHSSSASMNEELIDTLDHSETMQDVLLSNE 930
Score = 44.3 bits (103), Expect = 3e-04
Identities = 15/49 (30%), Positives = 29/49 (59%)
Query: 1 MLCNKEFLGGHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNHVK 49
+LC +E + I+ H++ H + G + C +C +KF+ + + H+ HVK
Sbjct: 558 LLCKRECIEARILHHSKMHMEDGIYTCPVCIKKFKRKEMFVPHVMEHVK 606
>gi|138175817 zinc finger protein 236 [Homo sapiens]
Length = 1845
Score = 58.5 bits (140), Expect = 2e-08
Identities = 70/349 (20%), Positives = 125/349 (35%), Gaps = 39/349 (11%)
Query: 1 MLCNKEFL-GGHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNHVKKIQRQQIAAA 59
++CN F GG + RH H + C C + F+ +KH+K H R ++A
Sbjct: 716 LICNGAFTTGGSLRRHMGIHNDLRPYMCPYCQKTFKTSLNCKKHMKTH-----RYELAQQ 770
Query: 60 QQDDQEVTALEEINCSSSSISFENG-----NSDSKDLEVETLTASSEGNKEVIPEHVA-- 112
Q Q+ ++++ S+ SD E + A+ E ++ P+HV
Sbjct: 771 LQQHQQAASIDDSTVDQQSMQASTQMQVEIESDELPQTAEVVAANPEAMLDLEPQHVVGT 830
Query: 113 -------EFIEIPISVPEDVIENVIENGSPNNSLNNVFKPLTECGDDYEEEEDEEGDYEE 165
+ + P+ ED + P + F+ + +E +G
Sbjct: 831 EEAGLGQQLADQPLEADED---GFVAPQDPLRGHVDQFEEQSPAQQSFEPAGLPQGFTVT 887
Query: 166 DDYDLNQETSVIHKINGTVCHPKDIYATD--QEGNFKCPALGCVRIFKRI------GFLN 217
D Y + + ++ + +T Q+ + P+ + + R+ L+
Sbjct: 888 DTYHQQPQFPPVQQLQDSSTLESQALSTSFHQQSLLQAPSSDGMNVTTRLIQESSQEELD 947
Query: 218 KHAMTVHPTDLNVRQTVMKWSKGKCKFCQRQFEDSQHFIDHLNRHSYPNVYFCLHFNCNE 277
A + N Q+ + +C +C + F+ S H H+ H+ Y C C
Sbjct: 948 LQAQGSQFLEDNEDQSRRSY---RCDYCNKGFKKSSHLKQHVRSHTGEKPYKCK--LCGR 1002
Query: 278 SFKLPFQLAQHTKSHRIFQA-QCSFPECHELFEDLPLLYEHEAQHYLSK 325
F L H K+H +A CS C+ F L H A H K
Sbjct: 1003 GFVSSGVLKSHEKTHTGVKAFSCSV--CNASFTTNGSLTRHMATHMSMK 1049
Score = 46.6 bits (109), Expect = 6e-05
Identities = 80/402 (19%), Positives = 132/402 (32%), Gaps = 127/402 (31%)
Query: 3 CNKEFLG-GHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNHVKK----------- 50
C K F + RH + H + F C CG+ F +G +Q H+ H +
Sbjct: 202 CGKTFQKPSQLTRHIRIHTGERPFKCSECGKAFNQKGALQTHMIKHTGEKPHACAFCPAA 261
Query: 51 -IQRQQIAA-AQQDDQEVTALEEINCSSSSISF------------------ENGNSDSKD 90
Q+ + + Q+ EV NC+ S F +N S ++
Sbjct: 262 FSQKGNLQSHVQRVHSEVKNGPTYNCTECSCVFKSLGSLNTHISKMHMGGPQNSTSSTET 321
Query: 91 LEVETLT----------------ASSEGNKEVIPEHVAEFIE------------------ 116
V T T ASS+ + + + + + + +E
Sbjct: 322 AHVLTATLFQTLPLQQTEAQATSASSQPSSQAVSDVIQQLLELSEPAPVESGQSPQPGQQ 381
Query: 117 --IPISVPEDVIENVIENGS---------PNNS-----------------LNNVFKPLTE 148
I + + +D+++ +EN PN+S ++N T+
Sbjct: 382 LSITVGINQDILQQALENSGLSSIPAAAHPNDSCHAKTSAPHAQNPDVSSVSNEQTDPTD 441
Query: 149 CGDDYEEEEDEEGDYEEDDYDLNQETSV---IHKINGTVCH-----------PKD----I 190
+ E+E E+ D +E + + I + NG H P D I
Sbjct: 442 AEQEKEQESPEKLDKKEKKMIKKKSPFLPGSIREENGVRWHVCPYCAKEFRKPSDLVRHI 501
Query: 191 YATDQEGNFKCPALGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKGKCKFCQRQFE 250
E FKCP C R F L H T T +K KC++C + F
Sbjct: 502 RIHTHEKPFKCPQ--CFRAFAVKSTLTAHIKT---------HTGIK--AFKCQYCMKSFS 548
Query: 251 DSQHFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSH 292
S H+ H+ + C H C++ F+ H SH
Sbjct: 549 TSGSLKVHIRLHTGVRPFACPH--CDKKFRTSGHRKTHIASH 588
Score = 46.2 bits (108), Expect = 8e-05
Identities = 77/379 (20%), Positives = 128/379 (33%), Gaps = 61/379 (16%)
Query: 3 CNKEFLG-GHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNH--VKKIQRQQIAAA 59
C KEF +VRH + H + F C C R F + + H+K H +K + Q +
Sbjct: 487 CAKEFRKPSDLVRHIRIHTHEKPFKCPQCFRAFAVKSTLTAHIKTHTGIKAFKCQYCMKS 546
Query: 60 QQDDQEV-------TALEEINCSSSSISFENGN-------SDSKDLEVETLTASSEGNKE 105
+ T + C F S K E+ + + K
Sbjct: 547 FSTSGSLKVHIRLHTGVRPFACPHCDKKFRTSGHRKTHIASHFKHTELRKMRHQRKPAKV 606
Query: 106 VIPEHVAEFIEIPISVPEDVIENVIENGSPNNSLNNVFKPLTECGDDYEEEEDEEGDYEE 165
+ + +IP+ P + + + P N + +++ E D
Sbjct: 607 RVGKTNIPVPDIPLQEPILITDLGLIQPIPKNQFFQSY-----FNNNFVNEADRP----- 656
Query: 166 DDYDLNQETSVIHKINGTVCHPKD-IYATDQEGNFKCPALGCVRIFKRIGFLNKHAMTVH 224
+ H+ CH K I + E FKC C R F G L H T
Sbjct: 657 ------YKCFYCHRAYKKSCHLKQHIRSHTGEKPFKCSQ--CGRGFVSAGVLKAHIRT-- 706
Query: 225 PTDLNVRQTVMKWSKGKCKFCQRQFEDSQHFIDHLNRHSYPNVYFCLHFNCNESFKLPFQ 284
T +K KC C F H+ H+ Y C + C ++FK
Sbjct: 707 -------HTGLK--SFKCLICNGAFTTGGSLRRHMGIHNDLRPYMCPY--CQKTFKTSLN 755
Query: 285 LAQHTKSHRIFQAQCSFPECHELFEDLPLLYEHEAQHYLSKTPESSAQPSETILWDVQTD 344
+H K+HR +EL + L ++ A S + S Q S + ++++D
Sbjct: 756 CKKHMKTHR-----------YELAQQLQ-QHQQAASIDDSTVDQQSMQASTQMQVEIESD 803
Query: 345 SNPNQEKDSSSNEKQTISL 363
P + ++N + + L
Sbjct: 804 ELPQTAEVVAANPEAMLDL 822
Score = 42.7 bits (99), Expect = 0.001
Identities = 66/305 (21%), Positives = 108/305 (35%), Gaps = 74/305 (24%)
Query: 3 CNKEFL-GGHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNHVKKIQRQQIAAAQQ 61
CNK F H+ +H ++H + + C +CGR F + G+++ H K H
Sbjct: 972 CNKGFKKSSHLKQHVRSHTGEKPYKCKLCGRGFVSSGVLKSHEKTH-------------- 1017
Query: 62 DDQEVTALEEINCSSSSISFENGNSDSKDLEVETLTAS------SEGNKEVIPEHVAEFI 115
T ++ +CS + SF S ++ + EG + + H + +
Sbjct: 1018 -----TGVKAFSCSVCNASFTTNGSLTRHMATHMSMKPYKCPFCEEGFRTTV--HCKKHM 1070
Query: 116 EIPISVPEDVIENVIENGSPNNSLNNVFKPLTECGDDYEEEEDEEGDYEEDDYD------ 169
+ +VP V TE GD EEE+E D
Sbjct: 1071 KRHQTVPSAVSAT----------------GETEGGDICMEEEEEHSDRNASRKSRPEVIT 1114
Query: 170 -LNQETSVIHKINGTVCHPKDIYATDQEGNFKCPALGCVRIFKRIGFLNKHA-MTVHPTD 227
+ET+ + KI P++ AT E A RI + +K A + P
Sbjct: 1115 FTEEETAQLAKIR-----PQES-ATVSEKVLVQSAAEKDRISE---LRDKQAELQDEPKH 1165
Query: 228 LNVRQTVMKWSKGKCKFCQRQFEDSQHFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQ 287
N C +C + F+ + H+ H+ Y C C +SF + L
Sbjct: 1166 ANC-----------CTYCPKSFKKPSDLVRHVRIHTGEKPYKC--DECGKSFTVKSTLDC 1212
Query: 288 HTKSH 292
H K+H
Sbjct: 1213 HVKTH 1217
Score = 41.2 bits (95), Expect = 0.003
Identities = 42/162 (25%), Positives = 62/162 (38%), Gaps = 50/162 (30%)
Query: 201 CPALGCVRIFKRIGFLNKHAMTVHPTDLNV----------------------RQTVMKWS 238
CP C + F R+ L H M +H + N+ RQ +
Sbjct: 95 CPV--CNKKFSRVASLKAHIM-LHEKEENLICSECGDEFTLQSQLAVHMEEHRQELAGTR 151
Query: 239 KGKCKFCQRQFEDSQHFIDHLNRH---------SYPN-------VYFCLHFNCNESFKLP 282
+ CK C+++FE S +H+ H SY Y C H C ++F+ P
Sbjct: 152 QHACKACKKEFETSSELKEHMKTHYKIRVSSTRSYNRNIDRSGFTYSCPH--CGKTFQKP 209
Query: 283 FQLAQHTKSH---RIFQAQCSFPECHELFEDLPLLYEHEAQH 321
QL +H + H R F +CS EC + F L H +H
Sbjct: 210 SQLTRHIRIHTGERPF--KCS--ECGKAFNQKGALQTHMIKH 247
Score = 37.4 bits (85), Expect = 0.038
Identities = 33/129 (25%), Positives = 51/129 (39%), Gaps = 27/129 (20%)
Query: 204 LGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKGKCKFCQRQFEDSQHFIDHLNRH- 262
L C R F L H+ VH R+ + C C++ F+ + H +H+ H
Sbjct: 1660 LECDRAFSSAAVLMHHSKEVHG-----RERIHG-----CPVCRKAFKRATHLKEHMQTHQ 1709
Query: 263 -------SYPNVYFCLHFNCNESFKLPFQLAQHTKSH---RIFQAQCSFPECHELFEDLP 312
P V+ C C ++F P QL +H++ H R F C+ C + F
Sbjct: 1710 AGPSLSSQKPRVFKC--DTCEKAFAKPSQLERHSRIHTGERPF--HCTL--CEKAFNQKS 1763
Query: 313 LLYEHEAQH 321
L H +H
Sbjct: 1764 ALQVHMKKH 1772
Score = 35.0 bits (79), Expect = 0.19
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 3 CNKEFLG-GHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNH 47
C K F + RH++ H + F C +C + F + +Q H+K H
Sbjct: 1727 CEKAFAKPSQLERHSRIHTGERPFHCTLCEKAFNQKSALQVHMKKH 1772
Score = 33.9 bits (76), Expect = 0.42
Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 1/47 (2%)
Query: 2 LCNKEFL-GGHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNH 47
+CN F G + RH H + C C FR +KH+K H
Sbjct: 1027 VCNASFTTNGSLTRHMATHMSMKPYKCPFCEEGFRTTVHCKKHMKRH 1073
Score = 33.5 bits (75), Expect = 0.55
Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 6/61 (9%)
Query: 2 LCNKEFLG-GHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNHVKKIQRQQIAAAQ 60
+CNK+F + H H+K+ + C CG +F + + H++ H RQ++A +
Sbjct: 97 VCNKKFSRVASLKAHIMLHEKEENLICSECGDEFTLQSQLAVHMEEH-----RQELAGTR 151
Query: 61 Q 61
Q
Sbjct: 152 Q 152
Score = 29.6 bits (65), Expect = 8.0
Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 5/52 (9%)
Query: 3 CNKEF-----LGGHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNHVK 49
C EF L H+ H Q AC C ++F +++H+K H K
Sbjct: 126 CGDEFTLQSQLAVHMEEHRQELAGTRQHACKACKKEFETSSELKEHMKTHYK 177
Score = 29.6 bits (65), Expect = 8.0
Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 3 CNKEF-LGGHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNH 47
C K F + + H + H + F+C +C F +G ++ H++ H
Sbjct: 1200 CGKSFTVKSTLDCHVKTHTGQKLFSCHVCSNAFSTKGSLKVHMRLH 1245
>gi|91822911 JAZF zinc finger 1 [Homo sapiens]
Length = 243
Score = 54.7 bits (130), Expect = 2e-07
Identities = 63/241 (26%), Positives = 103/241 (42%), Gaps = 37/241 (15%)
Query: 30 CGRKFRNRGLMQKHLK-NHVKKIQRQQIAAAQQDDQEVT--ALEEINCSSSSISFENGNS 86
CG F + +H++ NH+ R +Q+ Q+ T AL IN + + S
Sbjct: 19 CGLHFPTLADLIEHIEDNHIDTDPR---VLEKQELQQPTYVALSYINRFMTDAARREQES 75
Query: 87 DSKDLEVE---TLTAS-SEGNKEVIPEHVAEFIEIPISVPEDVIENVIENGSPNNSLNNV 142
K ++ + TL++S S GN P H + + P++ P +P++S
Sbjct: 76 LKKKIQPKLSLTLSSSVSRGNVSTPPRHSSGSLTPPVTPPI----------TPSSS---- 121
Query: 143 FKPLTECGDDYEEEEDEEGDYEEDDYDLNQETSVIHKINGTVCHPKDIYATDQEGNFKCP 202
F+ T G +Y+EEE DYEE D D + T I+ +E F CP
Sbjct: 122 FRSSTPTGSEYDEEEV---DYEESDSDESWTTE--SAISSEAILSSMCMNGGEEKPFACP 176
Query: 203 ALGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKGKCKFCQRQFEDSQHFIDH-LNR 261
GC + +K + + HA H T + VR+ KC+ C + ++ +Q H +N
Sbjct: 177 VPGCKKRYKNVNGIKYHAKNGHRTQIRVRKPF------KCR-CGKSYKTAQGLRHHTINF 229
Query: 262 H 262
H
Sbjct: 230 H 230
>gi|119393899 GLI-Kruppel family member GLI3 [Homo sapiens]
Length = 1580
Score = 53.1 bits (126), Expect = 7e-07
Identities = 71/317 (22%), Positives = 125/317 (39%), Gaps = 47/317 (14%)
Query: 148 ECGDDYEEEEDEEGDYEEDDY------DLNQETSVIHKINGTVCHPKDIYATDQEGNFKC 201
E GD E +++ E YE + + + + + ++H IN H ++ F C
Sbjct: 463 EEGDKDESKQEPEVIYETNCHWEGCAREFDTQEQLVHHINNDHIH-------GEKKEFVC 515
Query: 202 PALGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKGKCKFCQRQFEDSQHFIDHLNR 261
L C R K F ++ + VH R T K K + C + + ++ HL
Sbjct: 516 RWLDCSREQKP--FKAQYMLVVHMR----RHTGEKPHKCTFEGCTKAYSRLENLKTHLRS 569
Query: 262 HSYPNVYFCLHFNCNESFKLPFQLAQH-TKSHRIFQAQ-CSFPECHELFEDLPLLYE--- 316
H+ Y C H CN++F A+H ++H + C P C + + D L +
Sbjct: 570 HTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKHVK 629
Query: 317 --HEAQHYLSKTPESSAQPSETILWDVQTDS---NPNQEKDSSSNEKQTISLPVSTSKSR 371
H + +++K P D + S +P + + E+Q +S +T+ R
Sbjct: 630 TVHGPEAHVTKKQRGDIHPRPPPPRDSGSHSQSRSPGRPTQGALGEQQDLS---NTTSKR 686
Query: 372 KESTEPKTCIESMEKKTDSLVQNGNERS----DDTVSNISLIDQKMPDIEPNSENNCSSS 427
+E + KT EK S G + S +SN S ++P + S
Sbjct: 687 EECLQVKTV--KAEKPMTSQPSPGGQSSCSSQQSPISNYSNSGLELPLTDGGS------- 737
Query: 428 DIVNGHSEIEQTPLVSS 444
+ S I++TP++ S
Sbjct: 738 --IGDLSAIDETPIMDS 752
>gi|90193619 nuclear matrix transcription factor 4 isoform c [Homo
sapiens]
Length = 461
Score = 50.8 bits (120), Expect = 3e-06
Identities = 49/211 (23%), Positives = 75/211 (35%), Gaps = 27/211 (12%)
Query: 146 LTECGDDYEEEEDEEGDYEEDD--YDLNQETSVIHKINGTVCHPKDIYATDQEGNFKCPA 203
L E D Y +++ D+++D Y + + + H K T KCP
Sbjct: 149 LPEMNDPYVLSPEDDDDHQKDGKTYRCRMCSLTFYSKSEMQIHSKSHTETKPH---KCPH 205
Query: 204 LGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKGKCKFCQRQFEDSQHFIDHLNRHS 263
C + F +L +H + + +S C FC++ F H H H+
Sbjct: 206 --CSKTFANSSYLAQH--------IRIHSGAKPYS---CNFCEKSFRQLSHLQQHTRIHT 252
Query: 264 YPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQA-QCSFPECHELFEDLPLLYEHEAQHY 322
Y C H C ++F L H + H + +C CH + D L H + H
Sbjct: 253 GDRPYKCAHPGCEKAFTQLSNLQSHRRQHNKDKPFKCH--NCHRAYTDAASLEVHLSTHT 310
Query: 323 LSK------TPESSAQPSETILWDVQTDSNP 347
+ T S A SET L NP
Sbjct: 311 VKHAKVYTCTICSRAYTSETYLMKHMRKHNP 341
Score = 34.7 bits (78), Expect = 0.25
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Query: 8 LGGHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNHVKKIQRQQIAAA 59
L H V+HA+ + C IC R + + + KH++ H +QQ+ AA
Sbjct: 306 LSTHTVKHAKV------YTCTICSRAYTSETYLMKHMRKHNPPDLQQQVQAA 351
Score = 30.8 bits (68), Expect = 3.6
Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 3 CNKEFLGG-HIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNH 47
C+K F ++ +H + H ++C C + FR +Q+H + H
Sbjct: 206 CSKTFANSSYLAQHIRIHSGAKPYSCNFCEKSFRQLSHLQQHTRIH 251
>gi|90193617 nuclear matrix transcription factor 4 isoform b [Homo
sapiens]
Length = 500
Score = 50.8 bits (120), Expect = 3e-06
Identities = 49/211 (23%), Positives = 75/211 (35%), Gaps = 27/211 (12%)
Query: 146 LTECGDDYEEEEDEEGDYEEDD--YDLNQETSVIHKINGTVCHPKDIYATDQEGNFKCPA 203
L E D Y +++ D+++D Y + + + H K T KCP
Sbjct: 188 LPEMNDPYVLSPEDDDDHQKDGKTYRCRMCSLTFYSKSEMQIHSKSHTETKPH---KCPH 244
Query: 204 LGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKGKCKFCQRQFEDSQHFIDHLNRHS 263
C + F +L +H + + +S C FC++ F H H H+
Sbjct: 245 --CSKTFANSSYLAQH--------IRIHSGAKPYS---CNFCEKSFRQLSHLQQHTRIHT 291
Query: 264 YPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQA-QCSFPECHELFEDLPLLYEHEAQHY 322
Y C H C ++F L H + H + +C CH + D L H + H
Sbjct: 292 GDRPYKCAHPGCEKAFTQLSNLQSHRRQHNKDKPFKCH--NCHRAYTDAASLEVHLSTHT 349
Query: 323 LSK------TPESSAQPSETILWDVQTDSNP 347
+ T S A SET L NP
Sbjct: 350 VKHAKVYTCTICSRAYTSETYLMKHMRKHNP 380
Score = 34.7 bits (78), Expect = 0.25
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Query: 8 LGGHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNHVKKIQRQQIAAA 59
L H V+HA+ + C IC R + + + KH++ H +QQ+ AA
Sbjct: 345 LSTHTVKHAKV------YTCTICSRAYTSETYLMKHMRKHNPPDLQQQVQAA 390
Score = 30.8 bits (68), Expect = 3.6
Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 3 CNKEFLGG-HIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNH 47
C+K F ++ +H + H ++C C + FR +Q+H + H
Sbjct: 245 CSKTFANSSYLAQHIRIHSGAKPYSCNFCEKSFRQLSHLQQHTRIH 290
>gi|90193615 nuclear matrix transcription factor 4 isoform b [Homo
sapiens]
Length = 500
Score = 50.8 bits (120), Expect = 3e-06
Identities = 49/211 (23%), Positives = 75/211 (35%), Gaps = 27/211 (12%)
Query: 146 LTECGDDYEEEEDEEGDYEEDD--YDLNQETSVIHKINGTVCHPKDIYATDQEGNFKCPA 203
L E D Y +++ D+++D Y + + + H K T KCP
Sbjct: 188 LPEMNDPYVLSPEDDDDHQKDGKTYRCRMCSLTFYSKSEMQIHSKSHTETKPH---KCPH 244
Query: 204 LGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKGKCKFCQRQFEDSQHFIDHLNRHS 263
C + F +L +H + + +S C FC++ F H H H+
Sbjct: 245 --CSKTFANSSYLAQH--------IRIHSGAKPYS---CNFCEKSFRQLSHLQQHTRIHT 291
Query: 264 YPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQA-QCSFPECHELFEDLPLLYEHEAQHY 322
Y C H C ++F L H + H + +C CH + D L H + H
Sbjct: 292 GDRPYKCAHPGCEKAFTQLSNLQSHRRQHNKDKPFKCH--NCHRAYTDAASLEVHLSTHT 349
Query: 323 LSK------TPESSAQPSETILWDVQTDSNP 347
+ T S A SET L NP
Sbjct: 350 VKHAKVYTCTICSRAYTSETYLMKHMRKHNP 380
Score = 34.7 bits (78), Expect = 0.25
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Query: 8 LGGHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNHVKKIQRQQIAAA 59
L H V+HA+ + C IC R + + + KH++ H +QQ+ AA
Sbjct: 345 LSTHTVKHAKV------YTCTICSRAYTSETYLMKHMRKHNPPDLQQQVQAA 390
Score = 30.8 bits (68), Expect = 3.6
Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 3 CNKEFLGG-HIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNH 47
C+K F ++ +H + H ++C C + FR +Q+H + H
Sbjct: 245 CSKTFANSSYLAQHIRIHSGAKPYSCNFCEKSFRQLSHLQQHTRIH 290
>gi|90193613 nuclear matrix transcription factor 4 isoform a [Homo
sapiens]
Length = 516
Score = 50.8 bits (120), Expect = 3e-06
Identities = 49/211 (23%), Positives = 75/211 (35%), Gaps = 27/211 (12%)
Query: 146 LTECGDDYEEEEDEEGDYEEDD--YDLNQETSVIHKINGTVCHPKDIYATDQEGNFKCPA 203
L E D Y +++ D+++D Y + + + H K T KCP
Sbjct: 204 LPEMNDPYVLSPEDDDDHQKDGKTYRCRMCSLTFYSKSEMQIHSKSHTETKPH---KCPH 260
Query: 204 LGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKGKCKFCQRQFEDSQHFIDHLNRHS 263
C + F +L +H + + +S C FC++ F H H H+
Sbjct: 261 --CSKTFANSSYLAQH--------IRIHSGAKPYS---CNFCEKSFRQLSHLQQHTRIHT 307
Query: 264 YPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQA-QCSFPECHELFEDLPLLYEHEAQHY 322
Y C H C ++F L H + H + +C CH + D L H + H
Sbjct: 308 GDRPYKCAHPGCEKAFTQLSNLQSHRRQHNKDKPFKCH--NCHRAYTDAASLEVHLSTHT 365
Query: 323 LSK------TPESSAQPSETILWDVQTDSNP 347
+ T S A SET L NP
Sbjct: 366 VKHAKVYTCTICSRAYTSETYLMKHMRKHNP 396
Score = 34.7 bits (78), Expect = 0.25
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Query: 8 LGGHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNHVKKIQRQQIAAA 59
L H V+HA+ + C IC R + + + KH++ H +QQ+ AA
Sbjct: 361 LSTHTVKHAKV------YTCTICSRAYTSETYLMKHMRKHNPPDLQQQVQAA 406
Score = 30.8 bits (68), Expect = 3.6
Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 3 CNKEFLGG-HIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNH 47
C+K F ++ +H + H ++C C + FR +Q+H + H
Sbjct: 261 CSKTFANSSYLAQHIRIHSGAKPYSCNFCEKSFRQLSHLQQHTRIH 306
>gi|90193611 nuclear matrix transcription factor 4 isoform a [Homo
sapiens]
Length = 516
Score = 50.8 bits (120), Expect = 3e-06
Identities = 49/211 (23%), Positives = 75/211 (35%), Gaps = 27/211 (12%)
Query: 146 LTECGDDYEEEEDEEGDYEEDD--YDLNQETSVIHKINGTVCHPKDIYATDQEGNFKCPA 203
L E D Y +++ D+++D Y + + + H K T KCP
Sbjct: 204 LPEMNDPYVLSPEDDDDHQKDGKTYRCRMCSLTFYSKSEMQIHSKSHTETKPH---KCPH 260
Query: 204 LGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKGKCKFCQRQFEDSQHFIDHLNRHS 263
C + F +L +H + + +S C FC++ F H H H+
Sbjct: 261 --CSKTFANSSYLAQH--------IRIHSGAKPYS---CNFCEKSFRQLSHLQQHTRIHT 307
Query: 264 YPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQA-QCSFPECHELFEDLPLLYEHEAQHY 322
Y C H C ++F L H + H + +C CH + D L H + H
Sbjct: 308 GDRPYKCAHPGCEKAFTQLSNLQSHRRQHNKDKPFKCH--NCHRAYTDAASLEVHLSTHT 365
Query: 323 LSK------TPESSAQPSETILWDVQTDSNP 347
+ T S A SET L NP
Sbjct: 366 VKHAKVYTCTICSRAYTSETYLMKHMRKHNP 396
Score = 34.7 bits (78), Expect = 0.25
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Query: 8 LGGHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNHVKKIQRQQIAAA 59
L H V+HA+ + C IC R + + + KH++ H +QQ+ AA
Sbjct: 361 LSTHTVKHAKV------YTCTICSRAYTSETYLMKHMRKHNPPDLQQQVQAA 406
Score = 30.8 bits (68), Expect = 3.6
Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 3 CNKEFLGG-HIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNH 47
C+K F ++ +H + H ++C C + FR +Q+H + H
Sbjct: 261 CSKTFANSSYLAQHIRIHSGAKPYSCNFCEKSFRQLSHLQQHTRIH 306
>gi|36054194 nuclear matrix transcription factor 4 isoform a [Homo
sapiens]
Length = 516
Score = 50.8 bits (120), Expect = 3e-06
Identities = 49/211 (23%), Positives = 75/211 (35%), Gaps = 27/211 (12%)
Query: 146 LTECGDDYEEEEDEEGDYEEDD--YDLNQETSVIHKINGTVCHPKDIYATDQEGNFKCPA 203
L E D Y +++ D+++D Y + + + H K T KCP
Sbjct: 204 LPEMNDPYVLSPEDDDDHQKDGKTYRCRMCSLTFYSKSEMQIHSKSHTETKPH---KCPH 260
Query: 204 LGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKGKCKFCQRQFEDSQHFIDHLNRHS 263
C + F +L +H + + +S C FC++ F H H H+
Sbjct: 261 --CSKTFANSSYLAQH--------IRIHSGAKPYS---CNFCEKSFRQLSHLQQHTRIHT 307
Query: 264 YPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQA-QCSFPECHELFEDLPLLYEHEAQHY 322
Y C H C ++F L H + H + +C CH + D L H + H
Sbjct: 308 GDRPYKCAHPGCEKAFTQLSNLQSHRRQHNKDKPFKCH--NCHRAYTDAASLEVHLSTHT 365
Query: 323 LSK------TPESSAQPSETILWDVQTDSNP 347
+ T S A SET L NP
Sbjct: 366 VKHAKVYTCTICSRAYTSETYLMKHMRKHNP 396
Score = 34.7 bits (78), Expect = 0.25
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Query: 8 LGGHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNHVKKIQRQQIAAA 59
L H V+HA+ + C IC R + + + KH++ H +QQ+ AA
Sbjct: 361 LSTHTVKHAKV------YTCTICSRAYTSETYLMKHMRKHNPPDLQQQVQAA 406
Score = 30.8 bits (68), Expect = 3.6
Identities = 12/46 (26%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 3 CNKEFLGG-HIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNH 47
C+K F ++ +H + H ++C C + FR +Q+H + H
Sbjct: 261 CSKTFANSSYLAQHIRIHSGAKPYSCNFCEKSFRQLSHLQQHTRIH 306
>gi|167234429 zinc finger and BTB domain containing 17 [Homo
sapiens]
Length = 803
Score = 50.8 bits (120), Expect = 3e-06
Identities = 37/128 (28%), Positives = 52/128 (40%), Gaps = 16/128 (12%)
Query: 194 DQEGNFKCPALGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKGKCKFCQRQFEDSQ 253
D + KCP C + F ++G L H + +H D + KC+ C +QF S
Sbjct: 441 DTDKEHKCPH--CDKKFNQVGNLKAH-LKIHIADGPL----------KCRECGKQFTTSG 487
Query: 254 HFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQAQCSFPECHELFEDLPL 313
+ HL HS Y C+H C F P L +H + H + C C + F
Sbjct: 488 NLKRHLRIHSGEKPYVCIH--CQRQFADPGALQRHVRIH-TGEKPCQCVMCGKAFTQASS 544
Query: 314 LYEHEAQH 321
L H QH
Sbjct: 545 LIAHVRQH 552
Score = 39.7 bits (91), Expect = 0.008
Identities = 15/46 (32%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 3 CNKEFL-GGHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNH 47
C K+F G++ RH + H + + C+ C R+F + G +Q+H++ H
Sbjct: 479 CGKQFTTSGNLKRHLRIHSGEKPYVCIHCQRQFADPGALQRHVRIH 524
Score = 37.0 bits (84), Expect = 0.050
Identities = 32/126 (25%), Positives = 46/126 (36%), Gaps = 16/126 (12%)
Query: 196 EGNFKCPALGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKGKCKFCQRQFEDSQHF 255
E ++C C ++F G L +H + VH + +C +C R F D
Sbjct: 387 EARYRCE--DCGKLFTTSGNLKRHQL-VHSGE----------KPYQCDYCGRSFSDPTSK 433
Query: 256 IDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQAQCSFPECHELFEDLPLLY 315
+ HL H + C H C++ F L H K H I EC + F L
Sbjct: 434 MRHLETHDTDKEHKCPH--CDKKFNQVGNLKAHLKIH-IADGPLKCRECGKQFTTSGNLK 490
Query: 316 EHEAQH 321
H H
Sbjct: 491 RHLRIH 496
Score = 34.3 bits (77), Expect = 0.32
Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 3 CNKEFLG-GHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNH 47
C+K+F G++ H + H G C CG++F G +++HL+ H
Sbjct: 451 CDKKFNQVGNLKAHLKIHIADGPLKCRECGKQFTTSGNLKRHLRIH 496
Score = 33.1 bits (74), Expect = 0.72
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 3 CNKEFL-GGHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNH 47
C K F G++ RH H + + C CGR F + +HL+ H
Sbjct: 395 CGKLFTTSGNLKRHQLVHSGEKPYQCDYCGRSFSDPTSKMRHLETH 440
Score = 32.3 bits (72), Expect = 1.2
Identities = 24/106 (22%), Positives = 42/106 (39%), Gaps = 16/106 (15%)
Query: 3 CNKEFLG-GHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNHV------------K 49
C ++F G + RH + H + CV+CG+ F + H++ H +
Sbjct: 507 CQRQFADPGALQRHVRIHTGEKPCQCVMCGKAFTQASSLIAHVRQHTGEKPYVCERCGKR 566
Query: 50 KIQRQQIAAAQQDDQEVTALEEINCSSSSISFENGNSDSKDLEVET 95
+Q Q+A + + CS S +F N SK + + T
Sbjct: 567 FVQSSQLANHIRHHDNI---RPHKCSVCSKAFVNVGDLSKHIIIHT 609
Score = 31.6 bits (70), Expect = 2.1
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 3 CNKEFLG-GHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNH 47
C KEF G+ RH + H + F+C C + F + + H K H
Sbjct: 311 CGKEFTHTGNFKRHIRIHTGEKPFSCRECSKAFSDPAACKAHEKTH 356
Score = 31.2 bits (69), Expect = 2.7
Identities = 12/36 (33%), Positives = 18/36 (50%)
Query: 13 VRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNHV 48
+RH + H C C +KF G ++ HLK H+
Sbjct: 434 MRHLETHDTDKEHKCPHCDKKFNQVGNLKAHLKIHI 469
Score = 30.8 bits (68), Expect = 3.6
Identities = 29/153 (18%), Positives = 58/153 (37%), Gaps = 17/153 (11%)
Query: 2 LCNKEFLG-GHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNHVKKIQRQQIAAAQ 60
+C+K F+ G + +H H + + C CGR F +L++HVK + + +
Sbjct: 590 VCSKAFVNVGDLSKHIIIHTGEKPYLCDKCGRGFNR----VDNLRSHVKTVHQGKAGIKI 645
Query: 61 QDDQEVTALEEINCSSSSISFENGNSDSKDLEVETLTASSEGNKEVIPEHVAEFIEIPIS 120
+ +E + + + D L E L A++ V+P A +
Sbjct: 646 LEPEEGSEVSVVTV-----------DDMVTLATEALAATAVTQLTVVPVGAAVTAD-ETE 693
Query: 121 VPEDVIENVIENGSPNNSLNNVFKPLTECGDDY 153
V + I ++ + ++ CGD +
Sbjct: 694 VLKAEISKAVKQVQEEDPNTHILYACDSCGDKF 726
>gi|223468695 zinc finger protein 572 [Homo sapiens]
Length = 529
Score = 50.4 bits (119), Expect = 4e-06
Identities = 70/320 (21%), Positives = 116/320 (36%), Gaps = 51/320 (15%)
Query: 3 CNKEFLGG-HIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNHVKKIQRQQIAAAQQ 61
C K F H+++H ++H + + C +CG+ F + ++ +H + H + + +
Sbjct: 221 CGKRFSSSSHLIQHHRSHTGEKPYECSVCGKGFSHSYVLIEHQRTHTGEKPYKCPDCGKS 280
Query: 62 DDQEVTALEEINCSSSSISFENGNSDSKDLEVETLTASSEGNKEVIPEHVAEFIEIPISV 121
Q SSS I + ++ K + S N +I E P
Sbjct: 281 FSQ----------SSSLIRHQRTHTGEKPYKCLECEKSFGCNSTLIKHQRIHTGEKPYQC 330
Query: 122 PEDVIENVIENGSPNNSLNNVFKPLTECGDDYEEEEDEEGDYEEDDYDLNQETSVIHKIN 181
PE +N S +++L K T E+ E +YEE L Q +VI +
Sbjct: 331 PE-----CGKNFSRSSNLITHQKMHTG------EKSYESSEYEES---LGQNCNVIEECR 376
Query: 182 GTVCHPKDIYATDQEGNFKCPALGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKGK 241
+ E ++C C + F L +H T H + R
Sbjct: 377 IQL----------GEKPYRC--CECGKSFGLSSHLIRHQRT-HTGEKPYR---------- 413
Query: 242 CKFCQRQFEDSQHFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQAQCSF 301
C C + F S + H H+ Y C +C ESF F L +H ++H I +
Sbjct: 414 CSECWKTFSQSSTLVIHQRTHTGEKPYKCP--DCGESFSQSFNLIRHRRTH-IGEKPYKC 470
Query: 302 PECHELFEDLPLLYEHEAQH 321
C + F L +H H
Sbjct: 471 TSCEKCFSRSAYLSQHRKIH 490
Score = 43.5 bits (101), Expect = 5e-04
Identities = 28/90 (31%), Positives = 37/90 (41%), Gaps = 3/90 (3%)
Query: 241 KCKFCQRQFEDSQHFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQAQCS 300
KC C + F +S H I HL H+ Y C C +SF L H ++H +
Sbjct: 161 KCSECAKCFCNSSHLIQHLRMHTGEKPYQC--GECGKSFSNTSHLIIHERTH-TGEKPYK 217
Query: 301 FPECHELFEDLPLLYEHEAQHYLSKTPESS 330
PEC + F L +H H K E S
Sbjct: 218 CPECGKRFSSSSHLIQHHRSHTGEKPYECS 247
Score = 42.4 bits (98), Expect = 0.001
Identities = 30/91 (32%), Positives = 39/91 (42%), Gaps = 5/91 (5%)
Query: 241 KCKFCQRQFEDSQHFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQA-QC 299
KC C + F S I H H+ Y CL C +SF L +H + H + QC
Sbjct: 273 KCPDCGKSFSQSSSLIRHQRTHTGEKPYKCL--ECEKSFGCNSTLIKHQRIHTGEKPYQC 330
Query: 300 SFPECHELFEDLPLLYEHEAQHYLSKTPESS 330
PEC + F L H+ H K+ ESS
Sbjct: 331 --PECGKNFSRSSNLITHQKMHTGEKSYESS 359
Score = 37.4 bits (85), Expect = 0.038
Identities = 26/82 (31%), Positives = 33/82 (40%), Gaps = 5/82 (6%)
Query: 241 KCKFCQRQFEDSQHFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQA-QC 299
KC C + F +S H H HS Y C C + F L QH + H + QC
Sbjct: 133 KCSECWKSFSNSSHLRTHQRTHSGEKPYKC--SECAKCFCNSSHLIQHLRMHTGEKPYQC 190
Query: 300 SFPECHELFEDLPLLYEHEAQH 321
EC + F + L HE H
Sbjct: 191 G--ECGKSFSNTSHLIIHERTH 210
Score = 30.4 bits (67), Expect = 4.7
Identities = 11/40 (27%), Positives = 21/40 (52%)
Query: 11 HIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNHVKK 50
+++RH + H + + C C + F + +H K HV+K
Sbjct: 454 NLIRHRRTHIGEKPYKCTSCEKCFSRSAYLSQHRKIHVEK 493
Score = 30.0 bits (66), Expect = 6.1
Identities = 25/127 (19%), Positives = 48/127 (37%), Gaps = 19/127 (14%)
Query: 2 LCNKEFLGGHI-VRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNHVKK---------- 50
+C K F ++ + H + H + + C CG+ F + +H + H +
Sbjct: 248 VCGKGFSHSYVLIEHQRTHTGEKPYKCPDCGKSFSQSSSLIRHQRTHTGEKPYKCLECEK 307
Query: 51 --------IQRQQIAAAQQDDQEVTALEEINCSSSSISFENGNSDSKDLEVETLTASSEG 102
I+ Q+I ++ Q + + SS+ I+ + ++ K E S
Sbjct: 308 SFGCNSTLIKHQRIHTGEKPYQCPECGKNFSRSSNLITHQKMHTGEKSYESSEYEESLGQ 367
Query: 103 NKEVIPE 109
N VI E
Sbjct: 368 NCNVIEE 374
Score = 29.6 bits (65), Expect = 8.0
Identities = 13/46 (28%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 3 CNKEFLGG-HIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNH 47
C K F H+++H + H + + C CG+ F N + H + H
Sbjct: 165 CAKCFCNSSHLIQHLRMHTGEKPYQCGECGKSFSNTSHLIIHERTH 210
>gi|38570115 zinc finger protein 362 [Homo sapiens]
Length = 420
Score = 50.4 bits (119), Expect = 4e-06
Identities = 27/86 (31%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 241 KCKFCQRQFEDSQHFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQA-QC 299
KC C + F ++ + HL H Y C + C++SF+ L QHT+ H + +C
Sbjct: 256 KCPHCSKSFANASYLAQHLRIHLGVKPYHCSY--CDKSFRQLSHLQQHTRIHTGDRPYKC 313
Query: 300 SFPECHELFEDLPLLYEHEAQHYLSK 325
P C + F L L H+ QH K
Sbjct: 314 PHPGCEKAFTQLSNLQSHQRQHNKDK 339
Score = 43.1 bits (100), Expect = 7e-04
Identities = 30/122 (24%), Positives = 45/122 (36%), Gaps = 14/122 (11%)
Query: 200 KCPALGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKGKCKFCQRQFEDSQHFIDHL 259
KCP C + F +L +H + +H L V+ C +C + F H H
Sbjct: 256 KCPH--CSKSFANASYLAQH-LRIH---LGVKPY-------HCSYCDKSFRQLSHLQQHT 302
Query: 260 NRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQAQCSFPECHELFEDLPLLYEHEA 319
H+ Y C H C ++F L H + H P C+ + D L H +
Sbjct: 303 RIHTGDRPYKCPHPGCEKAFTQLSNLQSHQRQHN-KDKPYKCPNCYRAYSDSASLQIHLS 361
Query: 320 QH 321
H
Sbjct: 362 AH 363
Score = 36.2 bits (82), Expect = 0.085
Identities = 23/98 (23%), Positives = 36/98 (36%), Gaps = 11/98 (11%)
Query: 199 FKCPALGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKGKCKFCQRQFEDSQHFIDH 258
+KCP GC + F ++ L H H D KC C R + DS H
Sbjct: 311 YKCPHPGCEKAFTQLSNLQSHQRQ-HNKD----------KPYKCPNCYRAYSDSASLQIH 359
Query: 259 LNRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQ 296
L+ H+ + C ++ L +H H + +
Sbjct: 360 LSAHAIKHAKAYCCSMCGRAYTSETYLMKHMSKHTVVE 397
Score = 32.0 bits (71), Expect = 1.6
Identities = 12/40 (30%), Positives = 21/40 (52%), Gaps = 6/40 (15%)
Query: 8 LGGHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNH 47
L H ++HA+A + C +CGR + + + KH+ H
Sbjct: 360 LSAHAIKHAKA------YCCSMCGRAYTSETYLMKHMSKH 393
>gi|21361146 zinc finger protein 76 (expressed in testis) [Homo
sapiens]
Length = 570
Score = 49.3 bits (116), Expect = 1e-05
Identities = 53/232 (22%), Positives = 86/232 (37%), Gaps = 31/232 (13%)
Query: 196 EGNFKCPALGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKGKCKF--CQRQFEDSQ 253
E +KCP C + FK G L KH T H + +C F C R F S
Sbjct: 222 EKPYKCPEELCSKAFKTSGDLQKHVRT-HTGE----------RPFQCPFEGCGRSFTTSN 270
Query: 254 HFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQAQ-CSFPECHELFEDLP 312
H+ H+ Y C +C F H + H + C+ P C + F +
Sbjct: 271 IRKVHVRTHTGERPYTCPEPHCGRGFTSATNYKNHVRIHTGEKPYVCTVPGCGKRFTEYS 330
Query: 313 LLYEHEAQH-----YLSKTPESSAQPSETILWDVQT---DSNPNQEKDSSSNEKQTISLP 364
LY+H H Y T + + + T+ ++ + +E + + E+Q +
Sbjct: 331 SLYKHHVVHTHCKPYTCSTCGKTYRQTSTLAMHKRSAHGELEATEESEQALYEQQQL--- 387
Query: 365 VSTSKSRKESTEPKT-----CIESMEKKTDSLVQNGNERSDDTVSNISLIDQ 411
+ + +ES PK E E++ D Q +D ++LI Q
Sbjct: 388 -EAASAAEESPPPKRPRIAYLSEVKEERDDIPAQVAMVTEEDGAPQVALITQ 438
Score = 32.3 bits (72), Expect = 1.2
Identities = 15/49 (30%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 2 LCNKEF-LGGHIVRHAQAHQKKGSFACVI--CGRKFRNRGLMQKHLKNH 47
LC+K F G + +H + H + F C CGR F + + H++ H
Sbjct: 231 LCSKAFKTSGDLQKHVRTHTGERPFQCPFEGCGRSFTTSNIRKVHVRTH 279
Score = 32.0 bits (71), Expect = 1.6
Identities = 14/48 (29%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 3 CNKEFLGGHIVR-HAQAHQKKGSFACV--ICGRKFRNRGLMQKHLKNH 47
C K F G+ ++ H + H + + C +C + F+ G +QKH++ H
Sbjct: 202 CGKAFATGYGLKSHVRTHTGEKPYKCPEELCSKAFKTSGDLQKHVRTH 249
Score = 30.8 bits (68), Expect = 3.6
Identities = 19/80 (23%), Positives = 33/80 (41%), Gaps = 1/80 (1%)
Query: 243 KFCQRQFEDSQHFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQA-QCSF 301
K C R + + H H H+ Y C +C ++F + L H ++H + +C
Sbjct: 170 KGCGRLYTTAHHLKVHERAHTGDRPYRCDFPSCGKAFATGYGLKSHVRTHTGEKPYKCPE 229
Query: 302 PECHELFEDLPLLYEHEAQH 321
C + F+ L +H H
Sbjct: 230 ELCSKAFKTSGDLQKHVRTH 249
>gi|148596977 zinc finger protein 31 [Homo sapiens]
Length = 1043
Score = 48.9 bits (115), Expect = 1e-05
Identities = 55/253 (21%), Positives = 101/253 (39%), Gaps = 27/253 (10%)
Query: 142 VFKPLTECGDDYEEEEDEEGDYEEDDYDLNQETSVIHKINGTVCHPKDIYATDQEGNFKC 201
V +PL + G+D E E ++EG + + QE+S + + H + +Y ++ +KC
Sbjct: 657 VCQPL-DWGEDSENENEDEGQWGNPSQEQWQESSSEEDLEKLIDH-QGLYLAEKP--YKC 712
Query: 202 PALGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKGKCKFCQRQFEDSQHFIDHLNR 261
C++ F R H +H + KC C + F D + H
Sbjct: 713 DT--CMKSFSRSSHFIAH-QRIHTGE----------KPYKCLECGKNFSDRSNLNTHQRI 759
Query: 262 HSYPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQAQCSFPECHELFEDLPLLYEHEAQH 321
H+ Y CL C +SF L H + H + EC + F L +H+ H
Sbjct: 760 HTGEKPYKCL--ECGKSFSDHSNLITHQRIH-TGEKPYKCGECWKSFNQSSNLLKHQRIH 816
Query: 322 YLSKTPESSAQPSETILWDVQTDSN-PNQEKDSSSNEKQTISLPVS-----TSKSRKEST 375
L P+ ++P ++ N ++++ + Q+IS ++ ++ S ++
Sbjct: 817 -LGGNPDQCSEPGGNFAQSPSFSAHWRNSTEETAPEQPQSISKDLNSPGPHSTNSGEKLY 875
Query: 376 EPKTCIESMEKKT 388
E C S K +
Sbjct: 876 ECSECGRSFSKSS 888
Score = 36.2 bits (82), Expect = 0.085
Identities = 22/81 (27%), Positives = 32/81 (39%), Gaps = 3/81 (3%)
Query: 241 KCKFCQRQFEDSQHFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQAQCS 300
+C C R F S I H H+ Y C C +SF LA H ++H +
Sbjct: 876 ECSECGRSFSKSSALISHQRIHTGEKPYECA--ECGKSFSKSSTLANHQRTH-TGEKPYK 932
Query: 301 FPECHELFEDLPLLYEHEAQH 321
+C + F + L H+ H
Sbjct: 933 CVDCGKCFSERSKLITHQRVH 953
Score = 35.8 bits (81), Expect = 0.11
Identities = 57/315 (18%), Positives = 104/315 (33%), Gaps = 45/315 (14%)
Query: 3 CNKEFL-GGHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNHV--KKIQRQQIAAA 59
C K F H + H + H + + C+ CG+ F +R + H + H K + + +
Sbjct: 715 CMKSFSRSSHFIAHQRIHTGEKPYKCLECGKNFSDRSNLNTHQRIHTGEKPYKCLECGKS 774
Query: 60 QQDDQEVTALEEINCSSSSIS----FENGNSDSKDLEVETLTASSEGNKEVIPEHVAEFI 115
D + + I+ +++ N S L+ + + GN + E F
Sbjct: 775 FSDHSNLITHQRIHTGEKPYKCGECWKSFNQSSNLLKHQRIHLG--GNPDQCSEPGGNFA 832
Query: 116 EIPI--------------SVPEDVIENVIENGSPNNSLNNVFKPLTECGDDYEEE----E 157
+ P P+ + +++ G + + +ECG + +
Sbjct: 833 QSPSFSAHWRNSTEETAPEQPQSISKDLNSPGPHSTNSGEKLYECSECGRSFSKSSALIS 892
Query: 158 DEEGDYEEDDYDLNQETSVIHKINGTVCHPKDIYATDQEGNFKCPALGCVRIFKRIGFLN 217
+ E Y+ + K + H + E +KC + C + F L
Sbjct: 893 HQRIHTGEKPYECAECGKSFSKSSTLANHQR---THTGEKPYKC--VDCGKCFSERSKLI 947
Query: 218 KHAMTVHPTDLNVRQTVMKWSKGKCKFCQRQFEDSQHFIDHLNRHSYPNVYFCLHFNCNE 277
H VH + KC C + F D + I H H+ Y C C +
Sbjct: 948 TH-QRVHTGE----------KPYKCLECGKFFRDRSNLITHQRIHTGEKPYKCR--ECGK 994
Query: 278 SFKLPFQLAQHTKSH 292
F L H + H
Sbjct: 995 CFNQSSSLIIHQRIH 1009
>gi|112790163 metal-regulatory transcription factor 1 [Homo sapiens]
Length = 753
Score = 48.5 bits (114), Expect = 2e-05
Identities = 57/253 (22%), Positives = 96/253 (37%), Gaps = 44/253 (17%)
Query: 199 FKCPALGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKGKCKFCQRQFEDSQHFIDH 258
F C + GC + F + L KH T T K + C + F S H H
Sbjct: 229 FNCESEGCSKYFTTLSDLRKHIRT---------HTGEKPFRCDHDGCGKAFAASHHLKTH 279
Query: 259 LNRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQAQCSFPECHELFEDLPLLYEHE 318
+ H+ +FC C ++F + L H K H ++ Y
Sbjct: 280 VRTHTGERPFFCPSNGCEKTFSTQYSLKSHMKGH----------------DNKGHSYNAL 323
Query: 319 AQHYLSKTPESSAQPSETILWDVQTDSNPNQEKDSSSNEKQTISLPVSTSKSRKESTEPK 378
QH S+ S S+ L + TDS ++SS+ + Q +S + P
Sbjct: 324 PQHNGSEDTNHSLCLSDLSL--LSTDS--ELRENSSTTQGQDLS-----------TISPA 368
Query: 379 TCIESM-EKKTDSLVQNGNERSDDTVSNISLIDQKMPDIEPNSENNCSSS---DIVNGHS 434
ESM + D+ +Q +++ + + + + D+ P++ N+ S S + G S
Sbjct: 369 IIFESMFQNSDDTAIQEDPQQTASLTESFNGDAESVSDVPPSTGNSASLSLPLVLQPGLS 428
Query: 435 EIEQTPLVSSDPA 447
E Q L +S P+
Sbjct: 429 EPPQPLLPASAPS 441
Score = 34.3 bits (77), Expect = 0.32
Identities = 28/123 (22%), Positives = 44/123 (35%), Gaps = 9/123 (7%)
Query: 199 FKCPALGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKGKCKFCQRQFEDSQHFIDH 258
++C GC R + G L H T T + +G C + F S H
Sbjct: 140 YQCTFEGCPRTYSTAGNLRTHQKTHRG-----EYTFVCNQEG----CGKAFLTSYSLRIH 190
Query: 259 LNRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQAQCSFPECHELFEDLPLLYEHE 318
+ H+ + C C ++F ++L H + H C C + F L L +H
Sbjct: 191 VRVHTKEKPFECDVQGCEKAFNTLYRLKAHQRLHTGKTFNCESEGCSKYFTTLSDLRKHI 250
Query: 319 AQH 321
H
Sbjct: 251 RTH 253
>gi|116014328 zinc finger protein 143 [Homo sapiens]
Length = 638
Score = 48.5 bits (114), Expect = 2e-05
Identities = 36/133 (27%), Positives = 50/133 (37%), Gaps = 14/133 (10%)
Query: 196 EGNFKCPALGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKGKCKF--CQRQFEDSQ 253
E ++C C + FK G L KH T H + KC F C R F S
Sbjct: 294 EKPYRCSEDNCTKSFKTSGDLQKHIRT-HTGERPF----------KCPFEGCGRSFTTSN 342
Query: 254 HFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQAQ-CSFPECHELFEDLP 312
H+ H+ Y+C C +F H + H + C+ P C + F +
Sbjct: 343 IRKVHVRTHTGERPYYCTEPGCGRAFASATNYKNHVRIHTGEKPYVCTVPGCDKRFTEYS 402
Query: 313 LLYEHEAQHYLSK 325
LY+H H SK
Sbjct: 403 SLYKHHVVHTHSK 415
Score = 36.2 bits (82), Expect = 0.085
Identities = 32/131 (24%), Positives = 48/131 (36%), Gaps = 18/131 (13%)
Query: 196 EGNFKCPALGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKGKCKF--CQRQFEDSQ 253
E F+C GC +++ L H + H D + C+ C + F
Sbjct: 234 EKAFRCEYDGCGKLYTTAHHLKVHERS-HTGDRPYQ----------CEHAGCGKAFATGY 282
Query: 254 HFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSH---RIFQAQCSFPECHELFED 310
H+ H+ Y C NC +SFK L +H ++H R F +C F C F
Sbjct: 283 GLKSHVRTHTGEKPYRCSEDNCTKSFKTSGDLQKHIRTHTGERPF--KCPFEGCGRSFTT 340
Query: 311 LPLLYEHEAQH 321
+ H H
Sbjct: 341 SNIRKVHVRTH 351
Score = 30.4 bits (67), Expect = 4.7
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 3/48 (6%)
Query: 3 CNKEF-LGGHIVRHAQAHQKKGSFACVI--CGRKFRNRGLMQKHLKNH 47
C K F G + +H + H + F C CGR F + + H++ H
Sbjct: 304 CTKSFKTSGDLQKHIRTHTGERPFKCPFEGCGRSFTTSNIRKVHVRTH 351
Score = 30.0 bits (66), Expect = 6.1
Identities = 14/48 (29%), Positives = 25/48 (52%), Gaps = 3/48 (6%)
Query: 3 CNKEFLGGHIVR-HAQAHQKKGSFACVI--CGRKFRNRGLMQKHLKNH 47
C K F G+ ++ H + H + + C C + F+ G +QKH++ H
Sbjct: 274 CGKAFATGYGLKSHVRTHTGEKPYRCSEDNCTKSFKTSGDLQKHIRTH 321
>gi|14249488 zinc finger and SCAN domain containing 10 [Homo
sapiens]
Length = 725
Score = 48.5 bits (114), Expect = 2e-05
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 7/106 (6%)
Query: 2 LCNKEFL-GGHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNHVKKIQRQQIAAAQ 60
LC F H+ +H H + +F C CGR F+ R + +HL H Q Q+ A
Sbjct: 353 LCGHRFRQSSHLSKHLLTHSSEPAFLCAECGRGFQRRASLVQHLLAHA---QDQKPPCAP 409
Query: 61 QDDQEVTALEEINCSSSSISFENGNSDSKDLEVETL---TASSEGN 103
+ E L ++ CS SF+ +S + L + SSEG+
Sbjct: 410 ESKAEAPPLTDVLCSHCGQSFQRRSSLKRHLRIHARDKDRRSSEGS 455
Score = 38.5 bits (88), Expect = 0.017
Identities = 14/44 (31%), Positives = 25/44 (56%)
Query: 11 HIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNHVKKIQRQ 54
++ RH ++H + ++C CGR FR +++HL H + Q Q
Sbjct: 621 NLARHRRSHTGERPYSCQTCGRSFRRNAHLRRHLATHAEPGQEQ 664
Score = 36.6 bits (83), Expect = 0.065
Identities = 13/37 (35%), Positives = 21/37 (56%)
Query: 11 HIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNH 47
H+ RH + H + AC CG +FRN + +H ++H
Sbjct: 593 HLARHQRIHTGEKPHACDTCGHRFRNSSNLARHRRSH 629
Score = 35.4 bits (80), Expect = 0.15
Identities = 20/63 (31%), Positives = 24/63 (38%), Gaps = 6/63 (9%)
Query: 242 CKFCQRQFEDSQHFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQAQCSF 301
C C +F S H HL HS + C C F+ L QH +H AQ
Sbjct: 351 CHLCGHRFRQSSHLSKHLLTHSSEPAFLCA--ECGRGFQRRASLVQHLLAH----AQDQK 404
Query: 302 PEC 304
P C
Sbjct: 405 PPC 407
Score = 34.7 bits (78), Expect = 0.25
Identities = 14/49 (28%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Query: 3 CNKEFLGG-HIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNHVKK 50
C K F +++RH H ++C CGR F + +HL+ H ++
Sbjct: 674 CGKSFSRSCNLLRHLLVHTGARPYSCTQCGRSFSRNSHLLRHLRTHARE 722
Score = 34.3 bits (77), Expect = 0.32
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 3 CNKEFL-GGHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNH 47
C + F +V H + H + +AC CG++F R + +HL H
Sbjct: 500 CGRSFTQSSQLVSHQRVHTGEKPYACPQCGKRFVRRASLARHLLTH 545
Score = 33.5 bits (75), Expect = 0.55
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 3 CNKEFLGG-HIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNH 47
C K F H+V H + H + F+C CGR F + H + H
Sbjct: 472 CGKAFRRSEHLVAHRRVHTGERPFSCQACGRSFTQSSQLVSHQRVH 517
Score = 32.0 bits (71), Expect = 1.6
Identities = 66/340 (19%), Positives = 104/340 (30%), Gaps = 86/340 (25%)
Query: 17 QAHQKKGSFACVICGRKFRNRGLMQKHLKNHVKKIQRQQIAAAQQDDQEVTALEEINCSS 76
++H SF C+ CG+ F +++ H++ H + + Q + + S
Sbjct: 313 RSHPAGRSFLCLCCGKSFGRSSILKLHMRTHTDERPHACHLCGHRFRQSSHLSKHLLTHS 372
Query: 77 SSISF---ENGNSDSKDLE-VETLTASSEGNKEVIPEHVAEFIEIPISVPEDVIENVIEN 132
S +F E G + V+ L A ++ K P PE E
Sbjct: 373 SEPAFLCAECGRGFQRRASLVQHLLAHAQDQK-------------PPCAPESKAEA---- 415
Query: 133 GSPNNSLNNVFKPLTE-----CGDDYEEEEDEEGDYEEDDYDLNQETSVIHKINGTVCHP 187
PLT+ CG ++ + D ++ +S G+
Sbjct: 416 -----------PPLTDVLCSHCGQSFQRRSSLKRHLRIHARDKDRRSS-----EGSGSRR 459
Query: 188 KDIYATDQEGNFKCPALGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKGKCKFCQR 247
+D F C C + F+R L H VH + C+ C R
Sbjct: 460 RD----SDRRPFVCS--DCGKAFRRSEHLVAHRR-VHTGERPF----------SCQACGR 502
Query: 248 QFEDSQHFIDHLNRHSYPNVYFCLH--------------------------FNCNESFKL 281
F S + H H+ Y C C +SF
Sbjct: 503 SFTQSSQLVSHQRVHTGEKPYACPQCGKRFVRRASLARHLLTHGGPRPHHCTQCGKSFGQ 562
Query: 282 PFQLAQHTKSHRIFQAQCSFPECHELFEDLPLLYEHEAQH 321
LA+H +SH + C EC E F L H+ H
Sbjct: 563 TQDLARHQRSH-TGEKPCRCSECGEGFSQSAHLARHQRIH 601
Score = 31.6 bits (70), Expect = 2.1
Identities = 24/95 (25%), Positives = 36/95 (37%), Gaps = 5/95 (5%)
Query: 241 KCKFCQRQFEDSQHFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQAQCS 300
+C C F S H H H+ + C C F+ LA+H +SH + S
Sbjct: 580 RCSECGEGFSQSAHLARHQRIHTGEKPHAC--DTCGHRFRNSSNLARHRRSH-TGERPYS 636
Query: 301 FPECHELFEDLPLLYEHEAQHYLSKTPESSAQPSE 335
C F L H A H ++ + A+P +
Sbjct: 637 CQTCGRSFRRNAHLRRHLATH--AEPGQEQAEPPQ 669
>gi|84872173 zinc finger protein 131 [Homo sapiens]
Length = 589
Score = 47.8 bits (112), Expect = 3e-05
Identities = 90/480 (18%), Positives = 177/480 (36%), Gaps = 80/480 (16%)
Query: 71 EINCSSSSISFENGNSDSKDLEVETLTASSEGNKEVIPEHVAEFIEIPISVPEDVIENVI 130
E+ +S E + + + + +S E +P +E +EI + + E IE V
Sbjct: 122 EVRNKENSAPLEENTTGKNEAKKRKIAETSNVITESLPSAESEPVEIEVEIAEGTIE-VE 180
Query: 131 ENG------------------SPNNSLNNVFKPLTECGDDYEEEEDEEGDYEEDDYDLNQ 172
+ G S +S ++ L + Y + D +G +ED +
Sbjct: 181 DEGIETLEEVASAKQSVKYIQSTGSSDDSALALLADITSKYRQG-DRKGQIKEDGCPSDP 239
Query: 173 ETSVIHKINGTVCHPKDIYATDQEGNFKCPALGCVRIFKRIGFLNKHAMTVHPTDLNVRQ 232
+ H + ++T+ +FKC C + + R +H H + V +
Sbjct: 240 TSKQEHMKS---------HSTE---SFKCEI--CNKRYLRESAWKQHLNCYHLEEGGVSK 285
Query: 233 TVMKWSKGK----CKFCQRQFEDSQHFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQH 288
K GK C++C++QF+ HF +HL +H+ + C NC+E F L H
Sbjct: 286 ---KQRTGKKIHVCQYCEKQFDHFGHFKEHLRKHTGEKPFECP--NCHERFARNSTLKCH 340
Query: 289 ---------TKSHRIFQAQCSFPECHELFEDLPLLYEHEAQHYLSKTPESSAQPSETILW 339
K R +C C+ +F ++ H + T + + LW
Sbjct: 341 LTACQTGVGAKKGRKKLYECQV--CNSVFNS----WDQFKDHLVIHTGDKPNHCTLCDLW 394
Query: 340 DVQTDSNPNQEKDSSSNEKQTISLPVSTSKSRKESTEPKTCIESMEK------------K 387
+Q + D+ + ++ ++ V + ++R + TEP T + +E+ +
Sbjct: 395 FMQGNELRRHLSDAHNISERLVTEEVLSVETRVQ-TEPVTSMTIIEQVGKVHVLPLLQVQ 453
Query: 388 TDSLVQNGNERSDDTVSNISLIDQKMPDIEPNSE------NNCSSSDIVNGHSEIEQTPL 441
DS + D + + + D M ++ + + + H E
Sbjct: 454 VDSAQVTVEQVHPDLLQDSQVHDSHMSELPEQVQVSYLEVGRIQTEEGTEVHVEELHVER 513
Query: 442 VSSDPALKIDTNRIRTENGSILPSVVPQEHNTLPVSQAPSKPNLTSEHTSYGLILTKPYV 501
V+ P +++ T + + + P ++ QE SQA + +H + TKP V
Sbjct: 514 VNQMP-VEVQTELLEADLDHVTPEIMNQEER--ESSQADAAEAAREDHEDAEDLETKPTV 570
>gi|4507955 YY1 transcription factor [Homo sapiens]
Length = 414
Score = 47.4 bits (111), Expect = 4e-05
Identities = 35/140 (25%), Positives = 52/140 (37%), Gaps = 13/140 (9%)
Query: 187 PKDIYATDQEGNFKCPALGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKGKCKFCQ 246
P+ I D CP GC ++F+ + KH T H ++V C C
Sbjct: 284 PRKIKEDDAPRTIACPHKGCTKMFRDNSAMRKHLHT-HGPRVHV-----------CAECG 331
Query: 247 RQFEDSQHFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQAQ-CSFPECH 305
+ F +S H H+ + C C + F L F L H + H + C F C+
Sbjct: 332 KAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCN 391
Query: 306 ELFEDLPLLYEHEAQHYLSK 325
+ F L H H +K
Sbjct: 392 KKFAQSTNLKSHILTHAKAK 411
>gi|61743930 zinc finger and BTB domain containing 41 [Homo sapiens]
Length = 909
Score = 47.4 bits (111), Expect = 4e-05
Identities = 76/338 (22%), Positives = 124/338 (36%), Gaps = 57/338 (16%)
Query: 27 CVICGRKFRNRGLMQKHL----------KNHVKKIQRQQIAAAQQ--------------D 62
C C R F + ++ HL K H K+ + +A + D
Sbjct: 209 CKFCSRHFCYKKSLENHLAKTHRSLLLGKKHGLKMLERSFSARRSKRNRKCPVKFDDTSD 268
Query: 63 DQEVTALEEINCSSSSISFENGN-SDSKDLEVETLTASSEGNKEVIPEH--VAEFIEIPI 119
D++ + N + + E + +DS+D E E +E+ E+ + E E
Sbjct: 269 DEQESGDGSDNLNQENFDKEKSDRNDSEDPGSEYNAEEDELEEEMSDEYSDIEEQSEKDH 328
Query: 120 SVPE------DVIENVIENGSPNNSLNNVFKPLTECGDDYEEEEDEEGDYEEDDY----D 169
+ E D + NV E +P + N K + +C ++ D G YE +
Sbjct: 329 NDAEEEPEAGDSVGNVHEGLTPV-VIQNSNKKILQC-PKCDKTFDRIGKYESHTRVHTGE 386
Query: 170 LNQETSVIH-----KINGTVCHPKDIYATD-QEGNFKCPALGCVRIFKRIGFLNKHAMTV 223
E + H K N TV K T+ + KCP + K+ L KH
Sbjct: 387 KPFECDICHQRYSTKSNLTVHRKKHSNETEFHKKEHKCPYCNKLHASKKT--LAKHVKRF 444
Query: 224 HPTD----LNVRQTVMKWSKGKCKFCQRQFEDSQHFIDHLNRHSYPNVYFCLHFNCNESF 279
HP + +++++T K KC C++ F H +H+ HS + C + C E F
Sbjct: 445 HPENAQEFISIKKT--KSESWKCDICKKSFTRRPHLEEHMILHSQDKPFKCTY--CEEHF 500
Query: 280 KLPFQLAQHTKSHRIFQAQCSFPECHELFEDLPLLYEH 317
K F +H + + C C F D L H
Sbjct: 501 KSRFARLKHQEKFHLGPFPCDI--CGRQFNDTGNLKRH 536
Score = 43.5 bits (101), Expect = 5e-04
Identities = 83/380 (21%), Positives = 134/380 (35%), Gaps = 84/380 (22%)
Query: 19 HQKK---GSFACVICGRKFRNRGLMQKHLK-NHVKKIQRQQIAAAQQDDQEVTALEEIN- 73
HQ+K G F C ICGR+F + G +++H++ H K + + + T E +
Sbjct: 509 HQEKFHLGPFPCDICGRQFNDTGNLKRHIECTHGGKRKWTCFICGKSVRERTTLKEHLRI 568
Query: 74 --------CSSSSISFENGNSDSKDLEVETLTASSE----GNKEVIPEHVAEFIEIPISV 121
CS SF +G+S L V E G + +H+ +
Sbjct: 569 HSGEKPHLCSICGQSFRHGSSYRLHLRVHHDDKRYECDECGKTFIRHDHLTK-------- 620
Query: 122 PEDVIENVIENGSPNNSLNNVFKPLTECGDDYEEEEDEEGDYEEDDYDLNQETSVIHKIN 181
I +G + ECG + + Y+ ++ V K
Sbjct: 621 -----HKKIHSGEKAHQCE-------ECGKCFGRRDHLTVHYKS----VHLGEKVWQKYK 664
Query: 182 GTVCHPKDIYATDQEGNFKCPALGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKGK 241
T H D+ C +IFK L H T H + K
Sbjct: 665 ATF-HQCDV---------------CKKIFKGKSSLEMHFRT-HSGE----------KPYK 697
Query: 242 CKFCQRQFEDSQHFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQHTKS-HRIFQAQCS 300
C+ C + F + HL HS + C H CN +FK +L H H I
Sbjct: 698 CQICNQSFRIKKTLTKHLVIHSDARPFNCQH--CNATFKRKDKLKYHIDHVHEIKSPDDP 755
Query: 301 FPECHELFEDLPLLYEHEAQHYLSKTPESSAQP------SETILWDVQTD------SNPN 348
E LP+ Y + + + ++T + QP ++T+L +V + P
Sbjct: 756 LSTSEEKLVSLPVEYSSDDKIFQTETKQYMDQPKVYQSEAKTMLQNVSAEVCVPVTLVPV 815
Query: 349 QEKDSSSN-EKQTISLPVST 367
Q D+ S+ + T +LP S+
Sbjct: 816 QMPDTPSDLVRHTTTLPPSS 835
Score = 41.2 bits (95), Expect = 0.003
Identities = 42/178 (23%), Positives = 73/178 (41%), Gaps = 20/178 (11%)
Query: 215 FLNKHAMTVHPTDLNVRQTVMKWSKGK-----CKFCQRQFEDSQHFIDHLNRHSYPNVYF 269
F + +TVH +++ + V W K K C C++ F+ H HS Y
Sbjct: 640 FGRRDHLTVHYKSVHLGEKV--WQKYKATFHQCDVCKKIFKGKSSLEMHFRTHSGEKPYK 697
Query: 270 CLHFNCNESFKLPFQLAQHTKSH---RIFQAQCSFPECHELFEDLPLLYEHEAQHYLSKT 326
C CN+SF++ L +H H R F Q C+ F+ L H + K+
Sbjct: 698 CQ--ICNQSFRIKKTLTKHLVIHSDARPFNCQ----HCNATFKRKDKLKYHIDHVHEIKS 751
Query: 327 PESSAQPSETILWDVQTDSNPNQEKDSSSNEKQTISLP---VSTSKSRKESTEPKTCI 381
P+ SE L + + + + +K + KQ + P S +K+ ++ + C+
Sbjct: 752 PDDPLSTSEEKLVSLPVEYS-SDDKIFQTETKQYMDQPKVYQSEAKTMLQNVSAEVCV 808
Score = 31.6 bits (70), Expect = 2.1
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 2 LCNKEFLG-GHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNH 47
+C K F G + H + H + + C IC + FR + + KHL H
Sbjct: 672 VCKKIFKGKSSLEMHFRTHSGEKPYKCQICNQSFRIKKTLTKHLVIH 718
>gi|40807465 zinc finger protein 341 [Homo sapiens]
Length = 847
Score = 47.4 bits (111), Expect = 4e-05
Identities = 29/96 (30%), Positives = 45/96 (46%), Gaps = 7/96 (7%)
Query: 231 RQTVMKWSKGKCKFCQRQFEDSQHFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQHTK 290
+Q V+ S C+FC +F H+ +H VY C+ +C ++F +H K
Sbjct: 429 KQVVLIDSSYLCQFCPSKFSTYFQLKSHMTQHKNEQVYKCVVKSCAQTFPKLDTFLEHIK 488
Query: 291 SHRIFQAQCSFPECHELFEDLPLLYE---HEAQHYL 323
SH Q + S+ CH +D P LY+ H+ H L
Sbjct: 489 SH---QEELSY-RCHLCGKDFPSLYDLGVHQYSHSL 520
Score = 40.8 bits (94), Expect = 0.003
Identities = 57/245 (23%), Positives = 88/245 (35%), Gaps = 38/245 (15%)
Query: 197 GNFKCPALGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKGKCKFCQRQFEDSQHFI 256
G FKC C + F+R +L HA +H + KC C+ F
Sbjct: 585 GRFKCQV--CKKFFRREHYLKLHAH-IHSGE----------KPYKCSVCESAFNRKDKLK 631
Query: 257 DHLNRHSYPNVYFC---LHFNCNESFKLPFQLAQHTKSHRIFQA-QCSFPECHELFEDLP 312
H+ H Y C H C++ F P +L H SH + +C+ C + F
Sbjct: 632 RHMLIHEPFKKYKCPFSTHTGCSKEFNRPDKLKAHILSHSGMKLHKCAL--CSKSFSRRA 689
Query: 313 LLYEHEAQH---YLSKTPESSAQPS-ETILWDVQTDSNPNQEKDSSSNEKQTISLPVSTS 368
L EH+ H Y + + S L D + P ++KD + T
Sbjct: 690 HLAEHQRAHTGNYKFRCAGCAKGFSRHKYLKDHRCRLGPQKDKD------------LQTR 737
Query: 369 KSRKESTEPKTCIESMEKKTDSLVQN-GNERSDDTVSNISLIDQKMPDIEPNSENNCSSS 427
+ + P++C K L G E DT L+ + +P P +E + S
Sbjct: 738 RPPQRRAAPRSCGSGGRKVLTPLPDPLGLEELKDT--GAGLVPEAVPGKPPFAEPDAVLS 795
Query: 428 DIVNG 432
+V G
Sbjct: 796 IVVGG 800
Score = 38.5 bits (88), Expect = 0.017
Identities = 70/364 (19%), Positives = 130/364 (35%), Gaps = 58/364 (15%)
Query: 3 CNKEFLGGH-IVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNH-------------- 47
C+K F + +H ++H + F C+ CGR F + ++KH++ H
Sbjct: 320 CDKSFTKNFDLQQHIRSHTGEKPFQCIACGRAFAQKSNVKKHMQTHKVWPPGHSGGTVSR 379
Query: 48 -VKKIQRQQIAAAQQDDQEVTALEEINCSS---SSISFENGNSDSKDLEVETLTASSEGN 103
+Q + ++Q+D+E T L + + ++S K + + S
Sbjct: 380 NSVTVQVMALNPSRQEDEESTGLGQPLPGAPQPQALSTAGEEEGDKPESKQVVLIDSSYL 439
Query: 104 KEVIPEHVAEFIEIPISVPEDVIENVIENGSPNNSLNNVFKPLTECGDDYEEEEDEE--- 160
+ P + + ++ + + E V + S F L + + ++E
Sbjct: 440 CQFCPSKFSTYFQLKSHMTQHKNEQVYK--CVVKSCAQTFPKLDTFLEHIKSHQEELSYR 497
Query: 161 ----GDYEEDDYDLNQETSVIHKINGTVCHPKDIYATDQEGNFKCPALGCVRIFKRIGFL 216
G YDL +H+ + ++ P+ D +KC + CV + L
Sbjct: 498 CHLCGKDFPSLYDLG-----VHQYSHSLL-PQHSPKKD-NAVYKC--VKCVNKYSTPEAL 548
Query: 217 NKHAMT------------VHPTDLNVRQTVMKWSKG---KCKFCQRQFEDSQHFIDHLNR 261
H T V P + +R+ + G KC+ C++ F + H +
Sbjct: 549 EHHLQTATHNFPCPHCQKVFPCERYLRRHLPTHGSGGRFKCQVCKKFFRREHYLKLHAHI 608
Query: 262 HSYPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQA-QCSFPE---CHELFEDLPLLYEH 317
HS Y C C +F +L +H H F+ +C F C + F L H
Sbjct: 609 HSGEKPYKC--SVCESAFNRKDKLKRHMLIHEPFKKYKCPFSTHTGCSKEFNRPDKLKAH 666
Query: 318 EAQH 321
H
Sbjct: 667 ILSH 670
Score = 32.0 bits (71), Expect = 1.6
Identities = 13/60 (21%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 236 KWSKGKCKFCQRQFEDSQHFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSHRIF 295
K K KC +C + F + H+ H+ + C+ C +F + +H ++H+++
Sbjct: 311 KAQKLKCSYCDKSFTKNFDLQQHIRSHTGEKPFQCI--ACGRAFAQKSNVKKHMQTHKVW 368
Score = 30.4 bits (67), Expect = 4.7
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 5/47 (10%)
Query: 2 LCNKEFLG-GHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNH 47
LC+K F H+ H +AH F C C + F K+LK+H
Sbjct: 680 LCSKSFSRRAHLAEHQRAHTGNYKFRCAGCAKGFSR----HKYLKDH 722
Score = 29.6 bits (65), Expect = 8.0
Identities = 12/47 (25%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 2 LCNKEFLGGHIVR-HAQAHQKKGSFACVICGRKFRNRGLMQKHLKNH 47
+C K F H ++ HA H + + C +C F + +++H+ H
Sbjct: 591 VCKKFFRREHYLKLHAHIHSGEKPYKCSVCESAFNRKDKLKRHMLIH 637
>gi|110431364 GLIS family zinc finger 2 [Homo sapiens]
Length = 524
Score = 47.4 bits (111), Expect = 4e-05
Identities = 32/140 (22%), Positives = 58/140 (41%), Gaps = 10/140 (7%)
Query: 184 VCHPKDIYAT-DQEGNFKCPALGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKGKC 242
V H D + +++ + C GC R + GF ++ M +H +T +C
Sbjct: 186 VDHVNDYHVKPEKDAGYCCHWEGCARHGR--GFNARYKMLIHI------RTHTNEKPHRC 237
Query: 243 KFCQRQFEDSQHFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQA-QCSF 301
C + F ++ H H+ Y C + CN+ + +HT++H + + C
Sbjct: 238 PTCSKSFSRLENLKIHNRSHTGEKPYVCPYEGCNKRYSNSSDRFKHTRTHYVDKPYYCKM 297
Query: 302 PECHELFEDLPLLYEHEAQH 321
P CH+ + D L +H H
Sbjct: 298 PGCHKRYTDPSSLRKHIKAH 317
Score = 32.7 bits (73), Expect = 0.94
Identities = 13/51 (25%), Positives = 23/51 (45%)
Query: 245 CQRQFEDSQHFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSHRIF 295
C +++ +S H H Y+C C++ + P L +H K+H F
Sbjct: 270 CNKRYSNSSDRFKHTRTHYVDKPYYCKMPGCHKRYTDPSSLRKHIKAHGHF 320
Score = 30.8 bits (68), Expect = 3.6
Identities = 28/131 (21%), Positives = 49/131 (37%), Gaps = 41/131 (31%)
Query: 231 RQTVMKWSKGKCKFCQRQFEDSQHFIDHLNR-HSYP--NVYFCLHFN------------- 274
+Q V +W+K C + FE Q +DH+N H P + +C H+
Sbjct: 166 KQLVCRWAK-----CNQLFELLQDLVDHVNDYHVKPEKDAGYCCHWEGCARHGRGFNARY 220
Query: 275 -------------------CNESFKLPFQLAQHTKSHRIFQAQ-CSFPECHELFEDLPLL 314
C++SF L H +SH + C + C++ + +
Sbjct: 221 KMLIHIRTHTNEKPHRCPTCSKSFSRLENLKIHNRSHTGEKPYVCPYEGCNKRYSNSSDR 280
Query: 315 YEHEAQHYLSK 325
++H HY+ K
Sbjct: 281 FKHTRTHYVDK 291
>gi|209180475 nuclear matrix transcription factor 4 isoform d [Homo
sapiens]
Length = 577
Score = 47.0 bits (110), Expect = 5e-05
Identities = 39/155 (25%), Positives = 56/155 (36%), Gaps = 22/155 (14%)
Query: 200 KCPALGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKGKCKFCQRQFEDSQHFIDHL 259
KCP C + F +L +H L + ++ C +CQ+ F H H
Sbjct: 318 KCPH--CSKTFANTSYLAQH--------LRIHSGAKPYN---CSYCQKAFRQLSHLQQHT 364
Query: 260 NRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQA-QCSFPECHELFEDLPLLYEHE 318
H+ Y C H C ++F L H + H + +C CH + D L H
Sbjct: 365 RIHTGDRPYKCAHPGCEKAFTQLSNLQSHRRQHNKDKPFKCH--NCHRAYTDAASLEVHL 422
Query: 319 AQHYLSK------TPESSAQPSETILWDVQTDSNP 347
+ H + T S A SET L NP
Sbjct: 423 STHTVKHAKVYTCTICSRAYTSETYLMKHMRKHNP 457
Score = 42.4 bits (98), Expect = 0.001
Identities = 24/85 (28%), Positives = 35/85 (41%), Gaps = 6/85 (7%)
Query: 241 KCKFCQRQFEDSQHFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQAQC- 299
KC C + F +S + H+ HS Y C C +SF+ L QHT+ H +
Sbjct: 257 KCPHCSKTFANSSYLAQHIRIHSGAKPYSCNF--CEKSFRQLSHLQQHTRIHSKMHTETI 314
Query: 300 ---SFPECHELFEDLPLLYEHEAQH 321
P C + F + L +H H
Sbjct: 315 KPHKCPHCSKTFANTSYLAQHLRIH 339
Score = 35.0 bits (79), Expect = 0.19
Identities = 24/96 (25%), Positives = 39/96 (40%), Gaps = 15/96 (15%)
Query: 199 FKCPALGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKGKCKFCQRQFEDSQHFIDH 258
+KC GC + F ++ L H R+ K KC C R + D+ H
Sbjct: 373 YKCAHPGCEKAFTQLSNLQSH-----------RRQHNKDKPFKCHNCHRAYTDAASLEVH 421
Query: 259 LNRHS--YPNVYFCLHFNCNESFKLPFQLAQHTKSH 292
L+ H+ + VY C C+ ++ L +H + H
Sbjct: 422 LSTHTVKHAKVYTCT--ICSRAYTSETYLMKHMRKH 455
Score = 34.7 bits (78), Expect = 0.25
Identities = 16/52 (30%), Positives = 26/52 (50%), Gaps = 6/52 (11%)
Query: 8 LGGHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNHVKKIQRQQIAAA 59
L H V+HA+ + C IC R + + + KH++ H +QQ+ AA
Sbjct: 422 LSTHTVKHAKV------YTCTICSRAYTSETYLMKHMRKHNPPDLQQQVQAA 467
Score = 32.0 bits (71), Expect = 1.6
Identities = 13/48 (27%), Positives = 24/48 (50%), Gaps = 1/48 (2%)
Query: 3 CNKEFLGG-HIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNHVK 49
C+K F ++ +H + H ++C C + FR +Q+H + H K
Sbjct: 261 CSKTFANSSYLAQHIRIHSGAKPYSCNFCEKSFRQLSHLQQHTRIHSK 308
>gi|150170667 zinc finger protein 471 [Homo sapiens]
Length = 626
Score = 47.0 bits (110), Expect = 5e-05
Identities = 25/81 (30%), Positives = 38/81 (46%), Gaps = 3/81 (3%)
Query: 241 KCKFCQRQFEDSQHFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQAQCS 300
+CK C++ F+ S+H I H H+ Y C C ++F+ P LAQH + H +
Sbjct: 263 ECKECRKAFKQSEHLIQHQRIHTGEKPYKCK--ECRKAFRQPAHLAQHQRIH-TGEKPYE 319
Query: 301 FPECHELFEDLPLLYEHEAQH 321
EC + F D H+ H
Sbjct: 320 CKECGKAFSDGSSFARHQRCH 340
Score = 45.8 bits (107), Expect = 1e-04
Identities = 43/166 (25%), Positives = 66/166 (39%), Gaps = 14/166 (8%)
Query: 224 HPTDLNVRQTVMKWSKG-KCKFCQRQFEDSQHFIDHLNRHSYPNVYFCLHFNCNESFKLP 282
H L Q V K +CK C + F + H + HL H+ Y C C ++F++
Sbjct: 442 HHASLTQHQRVHSGEKPYECKECGKAFRQNVHLVSHLRIHTGEKPYECK--ECGKAFRIS 499
Query: 283 FQLAQHTKSHRIFQAQCSFPECHELFEDLPLLYEHEAQHYLSKTPESSAQPSETILWDVQ 342
QLA H + H + EC F+ H AQH + T E + +E Q
Sbjct: 500 SQLATHQRIH-TGEKPYECIECGNAFKQ----RSHLAQHQKTHTGEKPYECNECGKAFSQ 554
Query: 343 TDSNPNQEKDSSSNEKQTISLPVSTSKSRKESTEPKTCIESMEKKT 388
T SN Q + + EK P ++ K ++ +C + T
Sbjct: 555 T-SNLTQHQRIHTGEK-----PYKCTECGKAFSDSSSCAQHQRLHT 594
Score = 40.4 bits (93), Expect = 0.005
Identities = 24/84 (28%), Positives = 38/84 (45%), Gaps = 9/84 (10%)
Query: 241 KCKFCQRQFEDSQHFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSH---RIFQA 297
KC C + F S H H+ Y C C ++FK LAQH ++H ++F+
Sbjct: 207 KCNECDKTFTHSSSLTVHFRIHTGEKPYAC--EECGKAFKQRQHLAQHHRTHTGEKLFEC 264
Query: 298 QCSFPECHELFEDLPLLYEHEAQH 321
+ EC + F+ L +H+ H
Sbjct: 265 K----ECRKAFKQSEHLIQHQRIH 284
Score = 35.4 bits (80), Expect = 0.15
Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 2/52 (3%)
Query: 241 KCKFCQRQFEDSQHFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSH 292
KC C + F DS H H+ Y C F C ++F+ L H +SH
Sbjct: 572 KCTECGKAFSDSSSCAQHQRLHTGQRPYQC--FECGKAFRRKLSLICHQRSH 621
Score = 34.3 bits (77), Expect = 0.32
Identities = 21/103 (20%), Positives = 42/103 (40%), Gaps = 10/103 (9%)
Query: 3 CNKEF-LGGHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNHV--KKIQRQQIAAA 59
C K F + + H + H + + C+ CG F+ R + +H K H K + + A
Sbjct: 492 CGKAFRISSQLATHQRIHTGEKPYECIECGNAFKQRSHLAQHQKTHTGEKPYECNECGKA 551
Query: 60 QQDDQEVTALEEIN-------CSSSSISFENGNSDSKDLEVET 95
+T + I+ C+ +F + +S ++ + T
Sbjct: 552 FSQTSNLTQHQRIHTGEKPYKCTECGKAFSDSSSCAQHQRLHT 594
Score = 33.5 bits (75), Expect = 0.55
Identities = 16/68 (23%), Positives = 30/68 (44%), Gaps = 2/68 (2%)
Query: 241 KCKFCQRQFEDSQHFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSHRIFQAQCS 300
+CK C + F D F H H+ Y C+ C ++F+ +H +S+ + +
Sbjct: 319 ECKECGKAFSDGSSFARHQRCHTGKRPYECI--ECGKAFRYNTSFIRHWRSYHTGEKPFN 376
Query: 301 FPECHELF 308
+C + F
Sbjct: 377 CIDCGKAF 384
Score = 32.3 bits (72), Expect = 1.2
Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 3 CNKEFL-GGHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNH 47
C K F G RH + H K + C+ CG+ FR +H +++
Sbjct: 323 CGKAFSDGSSFARHQRCHTGKRPYECIECGKAFRYNTSFIRHWRSY 368
Score = 30.8 bits (68), Expect = 3.6
Identities = 13/47 (27%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 2 LCNKEFLG-GHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNH 47
+C K+F + +H + H + + C CG+ FR + HL+ H
Sbjct: 435 ICGKDFSHHASLTQHQRVHSGEKPYECKECGKAFRQNVHLVSHLRIH 481
Score = 30.0 bits (66), Expect = 6.1
Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Query: 3 CNKEFL-GGHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNH 47
C+K F + H + H + +AC CG+ F+ R + +H + H
Sbjct: 211 CDKTFTHSSSLTVHFRIHTGEKPYACEECGKAFKQRQHLAQHHRTH 256
Score = 30.0 bits (66), Expect = 6.1
Identities = 14/46 (30%), Positives = 21/46 (45%), Gaps = 1/46 (2%)
Query: 3 CNKEFLGG-HIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNH 47
C K F H+V H + H + + C CG+ FR + H + H
Sbjct: 464 CGKAFRQNVHLVSHLRIHTGEKPYECKECGKAFRISSQLATHQRIH 509
Score = 29.6 bits (65), Expect = 8.0
Identities = 13/49 (26%), Positives = 22/49 (44%), Gaps = 1/49 (2%)
Query: 3 CNKEFLG-GHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNHVKK 50
C K F H+ +H + H + + C CG+ F + +H + H K
Sbjct: 295 CRKAFRQPAHLAQHQRIHTGEKPYECKECGKAFSDGSSFARHQRCHTGK 343
>gi|55741868 zinc finger protein 319 [Homo sapiens]
Length = 582
Score = 47.0 bits (110), Expect = 5e-05
Identities = 43/146 (29%), Positives = 64/146 (43%), Gaps = 26/146 (17%)
Query: 196 EGNFKCPALGCVRIFKRIGFLNKHAMT-VHPTDLNVRQTVMK---WSKG----------- 240
E FKCP C + +KR L KH + + +R T+ + +S
Sbjct: 425 ERPFKCPV--CNKAYKRASALQKHQLAHCAAAEKPLRCTLCERRFFSSSEFVQHRCDPAR 482
Query: 241 ----KCKFCQRQFEDSQHFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSH-RIF 295
KC C+++F+ + H H+ Y C NC+++FK L +H H R
Sbjct: 483 EKPLKCPDCEKRFKYASDLQRHRRVHTGEKPYKCP--NCDKAFKQREHLNKHQGVHAREQ 540
Query: 296 QAQCSFPECHELFEDLPLLYEHEAQH 321
Q +C + C E F D+ LL EH AQH
Sbjct: 541 QFKCVW--CGERFLDVALLQEHSAQH 564
Score = 41.6 bits (96), Expect = 0.002
Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 23/123 (18%)
Query: 199 FKCPALGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKGKCKFCQRQFEDSQHFIDH 258
+ CP C + FK + L++H +H + KC C + F S H + H
Sbjct: 202 YSCPI--CQKPFKHLSELSRHER-IHTGE----------KPYKCTLCDKSFSQSSHLVHH 248
Query: 259 LNRHSYPNVYFCLHFNCNESFK----LPFQLAQHTKSHRIFQAQCSFPECHELFEDLPLL 314
HS Y C C ++FK L + H+ H +F +C+ E H F++ L
Sbjct: 249 KRTHSSERPYKCA--VCEKTFKHRSHLVRHMYAHSGEHHLF--RCNVCELH--FKESSEL 302
Query: 315 YEH 317
+H
Sbjct: 303 LQH 305
Score = 38.5 bits (88), Expect = 0.017
Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 2 LCNKEFL-GGHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNH 47
LC+K F H+V H + H + + C +C + F++R + +H+ H
Sbjct: 234 LCDKSFSQSSHLVHHKRTHSSERPYKCAVCEKTFKHRSHLVRHMYAH 280
Score = 36.6 bits (83), Expect = 0.065
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Query: 3 CNKEFLGG-HIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNH 47
C+K F H+ +H H ++ F CV CG +F + L+Q+H H
Sbjct: 519 CDKAFKQREHLNKHQGVHAREQQFKCVWCGERFLDVALLQEHSAQH 564
Score = 36.2 bits (82), Expect = 0.085
Identities = 23/109 (21%), Positives = 45/109 (41%), Gaps = 8/109 (7%)
Query: 213 IGFLNKHAMTVHPTDLNVRQTVMKWSKGKCKFCQRQFEDSQHFIDHLNRHSYPNVYFCLH 272
+GF ++A+ H R+T KC C++ F H + H + H+ ++ C
Sbjct: 350 MGFKQQYALMRH------RRTHKTEEPFKCGLCEKGFGQPSHLLYHQHVHTLETLFKCP- 402
Query: 273 FNCNESFKLPFQLAQHTKSHRIFQAQCSFPECHELFEDLPLLYEHEAQH 321
C + F +L +H + P C++ ++ L +H+ H
Sbjct: 403 -VCQKGFDQSAELLRHKCLPGAAERPFKCPVCNKAYKRASALQKHQLAH 450
Score = 35.0 bits (79), Expect = 0.19
Identities = 25/97 (25%), Positives = 41/97 (42%), Gaps = 14/97 (14%)
Query: 196 EGNFKCPALGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKGKCKFCQRQFEDSQHF 255
E +KC C + FK L +H M H + ++ +C C+ F++S
Sbjct: 255 ERPYKCAV--CEKTFKHRSHLVRH-MYAHSGEHHLF---------RCNVCELHFKESSEL 302
Query: 256 IDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQHTKSH 292
+ H S + C C ++FK P L QH ++H
Sbjct: 303 LQHPCTPSGERPFRC--GECQKAFKRPSDLRQHERTH 337
Score = 30.0 bits (66), Expect = 6.1
Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 1/51 (1%)
Query: 3 CNKEF-LGGHIVRHAQAHQKKGSFACVICGRKFRNRGLMQKHLKNHVKKIQ 52
C K F + RH + H + + C C + F+ R + KH H ++ Q
Sbjct: 491 CEKRFKYASDLQRHRRVHTGEKPYKCPNCDKAFKQREHLNKHQGVHAREQQ 541
>gi|229892345 GLI family zinc finger 1 isoform 2 [Homo sapiens]
Length = 978
Score = 46.2 bits (108), Expect = 8e-05
Identities = 45/195 (23%), Positives = 80/195 (41%), Gaps = 24/195 (12%)
Query: 134 SPNNS-LNNVFKPLTECGDDYEEEEDEEGD--YEED------DYDLNQETSVIHKINGTV 184
SPN++ + + + + +D E EE E + YE D + + + ++H IN
Sbjct: 73 SPNSTGIQDPLLGMLDGREDLEREEKREPESVYETDCRWDGCSQEFDSQEQLVHHINSEH 132
Query: 185 CHPKDIYATDQEGNFKCPALGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKGKCKF 244
H + F C GC R + F ++ + VH R T K K +
Sbjct: 133 IH-------GERKEFVCHWGGCSRELRP--FKAQYMLVVHMR----RHTGEKPHKCTFEG 179
Query: 245 CQRQFEDSQHFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQH-TKSHRIFQAQ-CSFP 302
C++ + ++ HL H+ Y C H C+++F A+H ++H + C P
Sbjct: 180 CRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLP 239
Query: 303 ECHELFEDLPLLYEH 317
C + + D L +H
Sbjct: 240 GCTKRYTDPSSLRKH 254
>gi|4885279 GLI family zinc finger 1 isoform 1 [Homo sapiens]
Length = 1106
Score = 46.2 bits (108), Expect = 8e-05
Identities = 45/195 (23%), Positives = 80/195 (41%), Gaps = 24/195 (12%)
Query: 134 SPNNS-LNNVFKPLTECGDDYEEEEDEEGD--YEED------DYDLNQETSVIHKINGTV 184
SPN++ + + + + +D E EE E + YE D + + + ++H IN
Sbjct: 201 SPNSTGIQDPLLGMLDGREDLEREEKREPESVYETDCRWDGCSQEFDSQEQLVHHINSEH 260
Query: 185 CHPKDIYATDQEGNFKCPALGCVRIFKRIGFLNKHAMTVHPTDLNVRQTVMKWSKGKCKF 244
H + F C GC R + F ++ + VH R T K K +
Sbjct: 261 IH-------GERKEFVCHWGGCSRELRP--FKAQYMLVVHMR----RHTGEKPHKCTFEG 307
Query: 245 CQRQFEDSQHFIDHLNRHSYPNVYFCLHFNCNESFKLPFQLAQH-TKSHRIFQAQ-CSFP 302
C++ + ++ HL H+ Y C H C+++F A+H ++H + C P
Sbjct: 308 CRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLP 367
Query: 303 ECHELFEDLPLLYEH 317
C + + D L +H
Sbjct: 368 GCTKRYTDPSSLRKH 382
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.313 0.130 0.381
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 24,014,112
Number of Sequences: 37866
Number of extensions: 1193510
Number of successful extensions: 20281
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 722
Number of HSP's successfully gapped in prelim test: 437
Number of HSP's that attempted gapping in prelim test: 7007
Number of HSP's gapped (non-prelim): 12559
length of query: 581
length of database: 18,247,518
effective HSP length: 108
effective length of query: 473
effective length of database: 14,157,990
effective search space: 6696729270
effective search space used: 6696729270
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 65 (29.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.