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Search of human proteins with 111548660
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|111548660 hypothetical protein LOC345222 isoform a [Homo
sapiens]
(278 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|111548660 hypothetical protein LOC345222 isoform a [Homo sapi... 556 e-159
gi|111548657 hypothetical protein LOC345222 isoform b [Homo sapi... 496 e-141
gi|109715825 zinc finger protein 690 [Homo sapiens] 42 8e-04
gi|58530876 melanoma antigen family C, 1 [Homo sapiens] 38 0.011
gi|194306660 coiled-coil domain containing 77 isoform b [Homo sa... 37 0.019
gi|194306658 coiled-coil domain containing 77 isoform b [Homo sa... 37 0.019
gi|14150165 coiled-coil domain containing 77 isoform a [Homo sap... 37 0.019
gi|194306535 coiled-coil domain containing 77 isoform b [Homo sa... 37 0.019
gi|4506049 hematopoietically expressed homeobox [Homo sapiens] 35 0.055
gi|148746195 trichohyalin [Homo sapiens] 35 0.072
gi|149158690 HLA-B associated transcript-2 [Homo sapiens] 35 0.094
gi|191252816 extracellular leucine-rich repeat and fibronectin t... 34 0.12
gi|219521893 coiled-coil transcriptional coactivator isoform 2 [... 34 0.12
gi|14149742 coiled-coil transcriptional coactivator isoform 1 [H... 34 0.12
gi|171906567 peripheral benzodiazepine receptor-associated prote... 34 0.12
gi|171906559 peripheral benzodiazepine receptor-associated prote... 34 0.12
gi|83716024 kinesin family member 21B [Homo sapiens] 34 0.12
gi|58761548 tau tubulin kinase 1 [Homo sapiens] 34 0.16
gi|32129212 zinc finger protein 434 [Homo sapiens] 34 0.16
gi|56682953 epidermal growth factor receptor pathway substrate 8... 33 0.21
gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin ... 33 0.21
gi|109715852 chromosome 6 open reading frame 204 isoform a [Homo... 33 0.21
gi|21735584 oxysterol-binding protein-like protein 3 isoform d [... 33 0.27
gi|21735582 oxysterol-binding protein-like protein 3 isoform c [... 33 0.27
gi|21735580 oxysterol-binding protein-like protein 3 isoform b [... 33 0.27
gi|14149704 oxysterol-binding protein-like protein 3 isoform a [... 33 0.27
gi|52426745 Cas-Br-M (murine) ecotropic retroviral transforming ... 32 0.47
gi|169208458 PREDICTED: similar to golgi autoantigen, golgin sub... 32 0.47
gi|41322923 plectin 1 isoform 11 [Homo sapiens] 32 0.47
gi|41322914 plectin 1 isoform 10 [Homo sapiens] 32 0.47
>gi|111548660 hypothetical protein LOC345222 isoform a [Homo
sapiens]
Length = 278
Score = 556 bits (1432), Expect = e-159
Identities = 278/278 (100%), Positives = 278/278 (100%)
Query: 1 MVRGAGPGPSLSALSHPTGASGMAAAEGPGYLVSPQAEKHRRARNWTDAEMRGLMLVWEE 60
MVRGAGPGPSLSALSHPTGASGMAAAEGPGYLVSPQAEKHRRARNWTDAEMRGLMLVWEE
Sbjct: 1 MVRGAGPGPSLSALSHPTGASGMAAAEGPGYLVSPQAEKHRRARNWTDAEMRGLMLVWEE 60
Query: 61 FFDELKQTKRNAKVYEKMASKLFEMTGERRLGEEIKIKITNMTFQYRKLKCMTDSESAPP 120
FFDELKQTKRNAKVYEKMASKLFEMTGERRLGEEIKIKITNMTFQYRKLKCMTDSESAPP
Sbjct: 61 FFDELKQTKRNAKVYEKMASKLFEMTGERRLGEEIKIKITNMTFQYRKLKCMTDSESAPP 120
Query: 121 DWPYYLAIDGILAKVPESCDGKLPDSQPPGPSTSQTEASLSPPAKSTPLYFPYNQCSYEG 180
DWPYYLAIDGILAKVPESCDGKLPDSQPPGPSTSQTEASLSPPAKSTPLYFPYNQCSYEG
Sbjct: 121 DWPYYLAIDGILAKVPESCDGKLPDSQPPGPSTSQTEASLSPPAKSTPLYFPYNQCSYEG 180
Query: 181 RFEDDRSDSSSSLLSLKFRSEERPVKKRKVQSCHLQKKQLRLLEAMVEEQRRLSRAVEET 240
RFEDDRSDSSSSLLSLKFRSEERPVKKRKVQSCHLQKKQLRLLEAMVEEQRRLSRAVEET
Sbjct: 181 RFEDDRSDSSSSLLSLKFRSEERPVKKRKVQSCHLQKKQLRLLEAMVEEQRRLSRAVEET 240
Query: 241 CREVRRVLDQQHILQVQSLQLQERMMSLLERIITKSSV 278
CREVRRVLDQQHILQVQSLQLQERMMSLLERIITKSSV
Sbjct: 241 CREVRRVLDQQHILQVQSLQLQERMMSLLERIITKSSV 278
>gi|111548657 hypothetical protein LOC345222 isoform b [Homo
sapiens]
Length = 267
Score = 496 bits (1277), Expect = e-141
Identities = 244/246 (99%), Positives = 245/246 (99%)
Query: 1 MVRGAGPGPSLSALSHPTGASGMAAAEGPGYLVSPQAEKHRRARNWTDAEMRGLMLVWEE 60
MVRGAGPGPSLSALSHPTGASGMAAAEGPGYLVSPQAEKHRRARNWTDAEMRGLMLVWEE
Sbjct: 1 MVRGAGPGPSLSALSHPTGASGMAAAEGPGYLVSPQAEKHRRARNWTDAEMRGLMLVWEE 60
Query: 61 FFDELKQTKRNAKVYEKMASKLFEMTGERRLGEEIKIKITNMTFQYRKLKCMTDSESAPP 120
FFDELKQTKRNAKVYEKMASKLFEMTGERRLGEEIKIKITNMTFQYRKLKCMTDSESAPP
Sbjct: 61 FFDELKQTKRNAKVYEKMASKLFEMTGERRLGEEIKIKITNMTFQYRKLKCMTDSESAPP 120
Query: 121 DWPYYLAIDGILAKVPESCDGKLPDSQPPGPSTSQTEASLSPPAKSTPLYFPYNQCSYEG 180
DWPYYLAIDGILAKVPESCDGKLPDSQPPGPSTSQTEASLSPPAKSTPLYFPYNQCSYEG
Sbjct: 121 DWPYYLAIDGILAKVPESCDGKLPDSQPPGPSTSQTEASLSPPAKSTPLYFPYNQCSYEG 180
Query: 181 RFEDDRSDSSSSLLSLKFRSEERPVKKRKVQSCHLQKKQLRLLEAMVEEQRRLSRAVEET 240
RFEDDRSDSSSSLLSLKFRSEERPVKKRKVQSCHLQKKQLRLLEAMVEEQRRLSRAVEET
Sbjct: 181 RFEDDRSDSSSSLLSLKFRSEERPVKKRKVQSCHLQKKQLRLLEAMVEEQRRLSRAVEET 240
Query: 241 CREVRR 246
CRE+ R
Sbjct: 241 CREISR 246
>gi|109715825 zinc finger protein 690 [Homo sapiens]
Length = 852
Score = 41.6 bits (96), Expect = 8e-04
Identities = 31/119 (26%), Positives = 60/119 (50%), Gaps = 11/119 (9%)
Query: 45 NWTDAEMRGLMLVWEE--FFDELKQTKRNAKVYEKMASKLFEMTGERRLGEEIKIKITNM 102
+W E + + + E F++ L+ RN+++Y +A +L+E G R E+ + K ++
Sbjct: 410 HWGYEETKTYLAILSETQFYEALRNCHRNSQLYGAVAERLWEY-GFLRTPEQCRTKFKSL 468
Query: 103 TFQYRKLKCMTDSESAPPDWPYYLAIDGILA---KVPESCDGKLPDSQPPGPSTSQTEA 158
YRK+K + AP P++ +D +++ P + DG+ + P TS+ EA
Sbjct: 469 QTSYRKVK----NGQAPETCPFFEEMDALVSVRVAAPPN-DGQEETASCPVQGTSEAEA 522
Score = 37.0 bits (84), Expect = 0.019
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 45 NWTDAEMRGLMLVWE--EFFDELKQTKRNAKVYEKMASKLFEMTGERRLGEEIKIKITNM 102
+W E R L+ + EF++ L+ RN++VY +A +L E G R E+ + K +
Sbjct: 247 HWGYEETRTLLAILSQTEFYEALRNCHRNSQVYGAVAERLREY-GFLRTLEQCRTKFKGL 305
Query: 103 TFQYRKLKCMTDSESAP 119
YRK+K E+ P
Sbjct: 306 QKSYRKVKSGHPPETCP 322
>gi|58530876 melanoma antigen family C, 1 [Homo sapiens]
Length = 1142
Score = 37.7 bits (86), Expect = 0.011
Identities = 35/141 (24%), Positives = 56/141 (39%), Gaps = 13/141 (9%)
Query: 109 LKCMTDSESAPPDWPYYLAIDGILAKVPESCDGKLPDSQPPGPSTSQTEASLSPPAKSTP 168
L+ +S +PP+ P + ++ P S L S P S T +SLS + +P
Sbjct: 791 LQSSHESPQSPPEGPAQSPLQSPVSSFPSSTSSSLSQSSPVSSFPSSTSSSLSKSSPESP 850
Query: 169 LYFPYNQCSYEGRFEDDRSDSSSSLLSLKFRSEERPVKKRKVQS-CHLQKKQLRLLEAMV 227
L P S SSS+ LS PV + S L+ L E+++
Sbjct: 851 LQSPV------------ISFSSSTSLSPFSEESSSPVDEYTSSSDTLLESDSLTDSESLI 898
Query: 228 EEQRRLSRAVEETCREVRRVL 248
E + + ++E E+ R L
Sbjct: 899 ESEPLFTYTLDEKVDELARFL 919
>gi|194306660 coiled-coil domain containing 77 isoform b [Homo
sapiens]
Length = 456
Score = 37.0 bits (84), Expect = 0.019
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 14/117 (11%)
Query: 162 PPAKSTPLYFPYNQCSYEGRFEDDRSDSSSSLLSLKFRSEERPVKKRKVQSCHLQKK--- 218
PP K T L Q + + E ++S+SS+ K S+ RP ++RK S H Q+
Sbjct: 135 PPHKVTIL-----QKTIQAVGECEQSESSAFKADPKI-SKRRPSRERKESSEHYQRDIQT 188
Query: 219 ---QLRLLEAMVEEQRRLSRAVEETCREVRRVLDQQHILQVQSLQLQERMMSLLERI 272
Q+ L+A + EQ +LSR E E RR+ ++ +QVQ + Q ++ L + +
Sbjct: 189 LILQVEALQAQLGEQTKLSREQIEGLIEDRRIHLEE--IQVQHQRNQNKIKELTKNL 243
>gi|194306658 coiled-coil domain containing 77 isoform b [Homo
sapiens]
Length = 456
Score = 37.0 bits (84), Expect = 0.019
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 14/117 (11%)
Query: 162 PPAKSTPLYFPYNQCSYEGRFEDDRSDSSSSLLSLKFRSEERPVKKRKVQSCHLQKK--- 218
PP K T L Q + + E ++S+SS+ K S+ RP ++RK S H Q+
Sbjct: 135 PPHKVTIL-----QKTIQAVGECEQSESSAFKADPKI-SKRRPSRERKESSEHYQRDIQT 188
Query: 219 ---QLRLLEAMVEEQRRLSRAVEETCREVRRVLDQQHILQVQSLQLQERMMSLLERI 272
Q+ L+A + EQ +LSR E E RR+ ++ +QVQ + Q ++ L + +
Sbjct: 189 LILQVEALQAQLGEQTKLSREQIEGLIEDRRIHLEE--IQVQHQRNQNKIKELTKNL 243
>gi|14150165 coiled-coil domain containing 77 isoform a [Homo
sapiens]
Length = 488
Score = 37.0 bits (84), Expect = 0.019
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 14/117 (11%)
Query: 162 PPAKSTPLYFPYNQCSYEGRFEDDRSDSSSSLLSLKFRSEERPVKKRKVQSCHLQKK--- 218
PP K T L Q + + E ++S+SS+ K S+ RP ++RK S H Q+
Sbjct: 167 PPHKVTIL-----QKTIQAVGECEQSESSAFKADPKI-SKRRPSRERKESSEHYQRDIQT 220
Query: 219 ---QLRLLEAMVEEQRRLSRAVEETCREVRRVLDQQHILQVQSLQLQERMMSLLERI 272
Q+ L+A + EQ +LSR E E RR+ ++ +QVQ + Q ++ L + +
Sbjct: 221 LILQVEALQAQLGEQTKLSREQIEGLIEDRRIHLEE--IQVQHQRNQNKIKELTKNL 275
>gi|194306535 coiled-coil domain containing 77 isoform b [Homo
sapiens]
Length = 456
Score = 37.0 bits (84), Expect = 0.019
Identities = 36/117 (30%), Positives = 59/117 (50%), Gaps = 14/117 (11%)
Query: 162 PPAKSTPLYFPYNQCSYEGRFEDDRSDSSSSLLSLKFRSEERPVKKRKVQSCHLQKK--- 218
PP K T L Q + + E ++S+SS+ K S+ RP ++RK S H Q+
Sbjct: 135 PPHKVTIL-----QKTIQAVGECEQSESSAFKADPKI-SKRRPSRERKESSEHYQRDIQT 188
Query: 219 ---QLRLLEAMVEEQRRLSRAVEETCREVRRVLDQQHILQVQSLQLQERMMSLLERI 272
Q+ L+A + EQ +LSR E E RR+ ++ +QVQ + Q ++ L + +
Sbjct: 189 LILQVEALQAQLGEQTKLSREQIEGLIEDRRIHLEE--IQVQHQRNQNKIKELTKNL 243
>gi|4506049 hematopoietically expressed homeobox [Homo sapiens]
Length = 270
Score = 35.4 bits (80), Expect = 0.055
Identities = 44/183 (24%), Positives = 72/183 (39%), Gaps = 35/183 (19%)
Query: 7 PGPSLSALSHPTGASGMAAAEGPGYLVSPQAEKHRRARNWTDAEMR----GLMLVWEEFF 62
P P A SH + A+ +AAA GPG P R ++T A +R G L+W F
Sbjct: 72 PTPIHPAFSHHSAAA-LAAAYGPGGFGGPLYPFPRTVNDYTHALLRHDPLGKPLLWSPFL 130
Query: 63 DELKQTKRNAKV----------YEKMASKLFEMTGERR-------LGE-EIKIKITNMTF 104
++ +V +K ++ + ER+ L E ++K N
Sbjct: 131 QRPLHKRKGGQVRFSNDQTIELEKKFETQKYLSPPERKRLAKMLQLSERQVKTWFQNRRA 190
Query: 105 QYRKLKCMTDSESAPPDWPYYLAIDGILAKVPESCDGK--LPDSQPPGPSTSQTEASLSP 162
++R+LK + + L + SCD + LP Q G S ++ S SP
Sbjct: 191 KWRRLKQENPQSNKKEE----------LESLDSSCDQRQDLPSEQNKGASLDSSQCSPSP 240
Query: 163 PAK 165
++
Sbjct: 241 ASQ 243
>gi|148746195 trichohyalin [Homo sapiens]
Length = 1943
Score = 35.0 bits (79), Expect = 0.072
Identities = 20/72 (27%), Positives = 39/72 (54%)
Query: 197 KFRSEERPVKKRKVQSCHLQKKQLRLLEAMVEEQRRLSRAVEETCREVRRVLDQQHILQV 256
KFR EE+ +++R+ Q Q++ + E + Q + + +EE R R+ +++ + +
Sbjct: 1337 KFREEEQLLQEREEQPLRRQERDRKFREEELRHQEQGRKFLEEEQRLRRQERERKFLKEE 1396
Query: 257 QSLQLQERMMSL 268
Q L+ QER L
Sbjct: 1397 QQLRCQEREQQL 1408
Score = 31.6 bits (70), Expect = 0.80
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 197 KFRSEERPVKKRKVQSCHLQKKQLRLLEAMVEEQ--RRLSRAVEETCREVRRVLDQQHIL 254
KFR EE+ +++R+ Q H Q++ + LE EEQ RR R + +E+R ++ L
Sbjct: 1462 KFREEEQLLQEREEQQLHRQERDRKFLE---EEQQLRRQERDRKFREQELRSQEPERKFL 1518
Query: 255 -QVQSLQLQERMMSLLE 270
+ Q L Q+R L+
Sbjct: 1519 EEEQQLHRQQRQRKFLQ 1535
Score = 30.4 bits (67), Expect = 1.8
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 4/71 (5%)
Query: 197 KFRSEERPVKKRKVQSCHLQKKQLRLLEAMVEEQRRLSRAVEETCREVRRVLDQQHILQ- 255
KFR +E+ +++R+ Q H Q++ + LE + RR R + R+ +++ +LQ
Sbjct: 1620 KFREDEQLLQEREEQQLHRQERDRKFLEE-EPQLRRQEREQQLRHDRDRKFREEEQLLQE 1678
Query: 256 --VQSLQLQER 264
Q L+ QER
Sbjct: 1679 GEEQQLRRQER 1689
Score = 29.6 bits (65), Expect = 3.0
Identities = 25/88 (28%), Positives = 41/88 (46%), Gaps = 7/88 (7%)
Query: 181 RFEDDRSDSSSSLLSLKFRSEERPVKK----RKVQSCHLQKKQLRLLEAMVEEQRRLSRA 236
+F ++ S KFR EE+ V++ RK Q +Q R + EEQ R
Sbjct: 1415 KFREEEQQLSRQERDRKFREEEQQVRRQERERKFLEEEQQLRQERHRKFREEEQLLQERE 1474
Query: 237 VEETCREVRRVLDQQHILQVQSLQLQER 264
++ R+ R D++ + + Q L+ QER
Sbjct: 1475 EQQLHRQER---DRKFLEEEQQLRRQER 1499
>gi|149158690 HLA-B associated transcript-2 [Homo sapiens]
Length = 2157
Score = 34.7 bits (78), Expect = 0.094
Identities = 33/127 (25%), Positives = 47/127 (37%), Gaps = 11/127 (8%)
Query: 136 PESCDGKL---PDSQPPGPSTSQTEASL------SPPAKSTPLYFPYNQCSYEGRFEDDR 186
P DGK P+S+PP P T+ E S PPA PL P+ + D
Sbjct: 370 PPEADGKKGNSPNSEPPTPKTAWAETSRPPETEPGPPAPKPPLPPPHRGPAGNWGPPGDY 429
Query: 187 SDSSSSLLSLKFRSEERPV--KKRKVQSCHLQKKQLRLLEAMVEEQRRLSRAVEETCREV 244
D +E ++RK S + R EE+RR+ C E
Sbjct: 430 PDRGGPPCKPPAPEDEDEAWRQRRKQSSSEISLAVERARRRREEEERRMQEERRAACAEK 489
Query: 245 RRVLDQQ 251
+ LD++
Sbjct: 490 LKRLDEK 496
>gi|191252816 extracellular leucine-rich repeat and fibronectin type
III domain containing 1 [Homo sapiens]
Length = 828
Score = 34.3 bits (77), Expect = 0.12
Identities = 34/120 (28%), Positives = 55/120 (45%), Gaps = 16/120 (13%)
Query: 100 TNMTFQYRKLKCMTDSESAPPDWPYYLAIDG------ILAKVPESCDGKLPDSQ---PPG 150
TN T Y +++C ES P YYL G IL+K+ C ++ PP
Sbjct: 209 TNATQTYDRMQC----ESPPVYSGYYLLGQGRRGHRSILSKLQSVCTEDSYAAEVVGPPR 264
Query: 151 PSTSQTEASLSPPAKSTPLYFPYNQ-CSYEGRFEDDRSDSSSSLLSLKFRSEERPVKKRK 209
P++ +++ SPP P P + C+ + F D + +L +L ++E RP+ K K
Sbjct: 265 PASGRSQPGRSPPPPPPP--EPSDMPCADDECFSGDGTTPLVALPTLATQAEARPLIKVK 322
>gi|219521893 coiled-coil transcriptional coactivator isoform 2
[Homo sapiens]
Length = 606
Score = 34.3 bits (77), Expect = 0.12
Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 17/143 (11%)
Query: 50 EMRGLMLVWEEFFDELKQTKRNAKVYEKMASKLFEMTGERRLGEEIKIKITNMTFQYRKL 109
E+R + V ++ ++L++ K+ Y + E + + E+ +
Sbjct: 389 ELRSALRVLQKEKEQLQEEKQELLEYMRKLEARLEKVADEKWNEDATTEDEEAAVGLSCP 448
Query: 110 KCMTDSESAPPDW----PYYLAIDGILAKVPESCDGKLPDSQPPGPSTSQTEASLSPPAK 165
+TDSE P+ PY L C+ P S P GP + +S PA
Sbjct: 449 AALTDSEDESPEDMRLPPYGL------------CERGDPGSSPAGPREASPLVVISQPAP 496
Query: 166 STP-LYFPYNQCSYEGRFEDDRS 187
+P L P S + ED++S
Sbjct: 497 ISPHLSGPAEDSSSDSEAEDEKS 519
>gi|14149742 coiled-coil transcriptional coactivator isoform 1 [Homo
sapiens]
Length = 691
Score = 34.3 bits (77), Expect = 0.12
Identities = 32/143 (22%), Positives = 55/143 (38%), Gaps = 17/143 (11%)
Query: 50 EMRGLMLVWEEFFDELKQTKRNAKVYEKMASKLFEMTGERRLGEEIKIKITNMTFQYRKL 109
E+R + V ++ ++L++ K+ Y + E + + E+ +
Sbjct: 474 ELRSALRVLQKEKEQLQEEKQELLEYMRKLEARLEKVADEKWNEDATTEDEEAAVGLSCP 533
Query: 110 KCMTDSESAPPDW----PYYLAIDGILAKVPESCDGKLPDSQPPGPSTSQTEASLSPPAK 165
+TDSE P+ PY L C+ P S P GP + +S PA
Sbjct: 534 AALTDSEDESPEDMRLPPYGL------------CERGDPGSSPAGPREASPLVVISQPAP 581
Query: 166 STP-LYFPYNQCSYEGRFEDDRS 187
+P L P S + ED++S
Sbjct: 582 ISPHLSGPAEDSSSDSEAEDEKS 604
>gi|171906567 peripheral benzodiazepine receptor-associated protein
1 isoform b [Homo sapiens]
Length = 1797
Score = 34.3 bits (77), Expect = 0.12
Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 10/107 (9%)
Query: 143 LPDSQPPGPSTSQTEASLSP--PAKSTP------LYFPYNQCSYEGRFEDDRSDSSSSLL 194
LP S PPGP+ + +P P ++TP L + E R + S+ S
Sbjct: 230 LPPSWPPGPALQARAGAPAPGAPGEATPQEDADNLPVILGEPEKEQRVQQLESELSKKRK 289
Query: 195 SLKFRSEERPVKKRKVQSCHLQKKQLRLLEA-MVEEQRRLS-RAVEE 239
+ +E K+R+ + LQ +Q + A +VEE RLS RA E+
Sbjct: 290 KCESLEQEARKKQRRCEELELQLRQAQNENARLVEENSRLSGRATEK 336
>gi|171906559 peripheral benzodiazepine receptor-associated protein
1 isoform a [Homo sapiens]
Length = 1857
Score = 34.3 bits (77), Expect = 0.12
Identities = 32/107 (29%), Positives = 49/107 (45%), Gaps = 10/107 (9%)
Query: 143 LPDSQPPGPSTSQTEASLSP--PAKSTP------LYFPYNQCSYEGRFEDDRSDSSSSLL 194
LP S PPGP+ + +P P ++TP L + E R + S+ S
Sbjct: 290 LPPSWPPGPALQARAGAPAPGAPGEATPQEDADNLPVILGEPEKEQRVQQLESELSKKRK 349
Query: 195 SLKFRSEERPVKKRKVQSCHLQKKQLRLLEA-MVEEQRRLS-RAVEE 239
+ +E K+R+ + LQ +Q + A +VEE RLS RA E+
Sbjct: 350 KCESLEQEARKKQRRCEELELQLRQAQNENARLVEENSRLSGRATEK 396
>gi|83716024 kinesin family member 21B [Homo sapiens]
Length = 1624
Score = 34.3 bits (77), Expect = 0.12
Identities = 19/72 (26%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 202 ERPVKKRKVQSCHLQKKQLRLLEAMVEEQRRLSRAVEETCREVRRVLDQQ--HILQVQSL 259
ER +KK + + ++K ++ L++ M EEQ+R + RE+ ++ +Q Q+++L
Sbjct: 742 ERELKKLQAEVAEMKKAKVALMKQMREEQQRRRLVETKRNREIAQLKKEQRRQEFQIRAL 801
Query: 260 QLQERMMSLLER 271
+ Q+R ++ R
Sbjct: 802 ESQKRQQEMVLR 813
>gi|58761548 tau tubulin kinase 1 [Homo sapiens]
Length = 1321
Score = 33.9 bits (76), Expect = 0.16
Identities = 41/134 (30%), Positives = 60/134 (44%), Gaps = 12/134 (8%)
Query: 118 APPDWPYYLAIDGILAKVPESCDGKLPDSQPPGPSTSQTEASLSPPAKSTPLYFPYNQCS 177
AP + P +A + L P DG P S P PS + A++SP + P P ++
Sbjct: 1001 APRETPSEMATNS-LPNGPALADGPAPVS-PLEPSPEKV-ATISPRRHAMPGSRPRSRIP 1057
Query: 178 YEGRFEDDRSDSSSSLLSLKFRSEERPVKKRKVQSCHLQKKQLRLL--------EAMVEE 229
ED S+ S SL S K R +R ++ + ++K+Q RLL + EE
Sbjct: 1058 VLLSEEDTGSEPSGSL-SAKERWSKRARPQQDLARLVMEKRQGRLLLRLASGASSSSSEE 1116
Query: 230 QRRLSRAVEETCRE 243
QRR S + T E
Sbjct: 1117 QRRASETLSGTGSE 1130
>gi|32129212 zinc finger protein 434 [Homo sapiens]
Length = 485
Score = 33.9 bits (76), Expect = 0.16
Identities = 18/67 (26%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Query: 46 WTDAEMRGLMLVWE--EFFDELKQTKRNAKVYEKMASKLFEMTGERRLGEEIKIKITNMT 103
W E + L+ + +F+ +L+ ++N+++Y MA L+E G R E+ + K ++
Sbjct: 44 WGYEETKTLLAILSSSQFYGKLQTCQQNSQIYRAMAEGLWEQ-GFLRTPEQCRTKFKSLQ 102
Query: 104 FQYRKLK 110
YRK++
Sbjct: 103 LSYRKVR 109
>gi|56682953 epidermal growth factor receptor pathway substrate 8
[Homo sapiens]
Length = 822
Score = 33.5 bits (75), Expect = 0.21
Identities = 26/85 (30%), Positives = 37/85 (43%), Gaps = 2/85 (2%)
Query: 141 GKLPDSQPPGPSTSQTEASLSPPAK-STPLYFPYNQCSYE-GRFEDDRSDSSSSLLSLKF 198
G P PP PS T A + P STP P ++ R SDS S++
Sbjct: 614 GPRPADTPPAPSPPPTPAPVPVPLPPSTPAPVPVSKVPANITRQNSSSSDSGGSIVRDSQ 673
Query: 199 RSEERPVKKRKVQSCHLQKKQLRLL 223
R ++ PV +RK Q +Q + + L
Sbjct: 674 RHKQLPVDRRKSQMEEVQDELIHRL 698
>gi|148596984 golgi autoantigen, golgin subfamily b, macrogolgin (with
transmembrane signal), 1 [Homo sapiens]
Length = 3259
Score = 33.5 bits (75), Expect = 0.21
Identities = 51/214 (23%), Positives = 86/214 (40%), Gaps = 21/214 (9%)
Query: 50 EMRGLMLVWEEFFDELKQTKRNAKVYEKMASKLFEMTGERRLGEEIKIKITNMTFQYRKL 109
E+ +L E+ ++L++ + A K K + ER L EE+K Y +L
Sbjct: 1161 ELEEKILALEKEKEQLQKKLQEALTSRKAILKKAQEK-ERHLREELK----QQKDDYNRL 1215
Query: 110 KCMTDSESAPPDWPYYLAIDGILAKVPESCDGKLPDSQPPGPSTSQTEASLSPPAKSTPL 169
+ D +S + + + +V ES DGKLP ST Q E+ S P PL
Sbjct: 1216 QEQFDEQSKENE-NIGDQLRQLQIQVRESIDGKLP-------STDQQESCSSTPGLEEPL 1267
Query: 170 YFPYNQCSYEGRFEDDRSDSSSSLLSLKFRSEERPVKKRKVQSCHLQKKQLRLLEA-MVE 228
+ Q + E + S SE+ + + K QL+ +EA VE
Sbjct: 1268 FKATEQHHTQPVLESNLCPDWPS------HSEDASALQGGTSVAQI-KAQLKEIEAEKVE 1320
Query: 229 EQRRLSRAVEETCREVRRVLDQQHILQVQSLQLQ 262
+ ++S E ++ V Q + Q L+++
Sbjct: 1321 LELKVSSTTSELTKKSEEVFQLQEQINKQGLEIE 1354
>gi|109715852 chromosome 6 open reading frame 204 isoform a [Homo
sapiens]
Length = 805
Score = 33.5 bits (75), Expect = 0.21
Identities = 40/136 (29%), Positives = 59/136 (43%), Gaps = 25/136 (18%)
Query: 158 ASLSPPAKSTPLYFPYNQ----CSYEGRFEDDRSDSSSSLLSLK---------FRSE--- 201
ASL P ++T L P+++ S +G FE + + +L L F E
Sbjct: 416 ASLQPQYENTSLQTPFSEESVSHSQQGEFEQKLASTEKEVLQLNEFLKQRLSLFSEEKKK 475
Query: 202 -ERPVKKRKVQSCHLQKKQLRLLEAMVEEQRRLSRAVEETCREVRRVLDQQHILQVQSLQ 260
E +K R L+KK + E E+QRR+ ET + L +Q QSLQ
Sbjct: 476 LEEKLKTRDRYISSLKKKCQKESEQNKEKQRRI-----ETLEKYLADLPTLDDVQSQSLQ 530
Query: 261 LQ---ERMMSLLERII 273
LQ E+ +L E +I
Sbjct: 531 LQILEEKNKNLQEALI 546
>gi|21735584 oxysterol-binding protein-like protein 3 isoform d
[Homo sapiens]
Length = 820
Score = 33.1 bits (74), Expect = 0.27
Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 17/104 (16%)
Query: 150 GPSTSQTEASLSPPAKSTPLYFPYNQCSYEGRFEDDRSDSSSSLLSLKFRSEERPVKKRK 209
G S+S +P K Y+ + Q + E D S S +FR ++R +++
Sbjct: 695 GGSSSACVWRANPMPKGYEQYYSFTQFALELNEMDPSSKSLLPPTDTRFRPDQRFLEEGN 754
Query: 210 VQSCHLQKKQLRLLEAMVEEQRRLSRAVEETCREVRRVLDQQHI 253
++ +QK++ +E+ RE RRVL++ H+
Sbjct: 755 LEEAEIQKQR-----------------IEQLQRERRRVLEENHV 781
>gi|21735582 oxysterol-binding protein-like protein 3 isoform c
[Homo sapiens]
Length = 851
Score = 33.1 bits (74), Expect = 0.27
Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 17/104 (16%)
Query: 150 GPSTSQTEASLSPPAKSTPLYFPYNQCSYEGRFEDDRSDSSSSLLSLKFRSEERPVKKRK 209
G S+S +P K Y+ + Q + E D S S +FR ++R +++
Sbjct: 726 GGSSSACVWRANPMPKGYEQYYSFTQFALELNEMDPSSKSLLPPTDTRFRPDQRFLEEGN 785
Query: 210 VQSCHLQKKQLRLLEAMVEEQRRLSRAVEETCREVRRVLDQQHI 253
++ +QK++ +E+ RE RRVL++ H+
Sbjct: 786 LEEAEIQKQR-----------------IEQLQRERRRVLEENHV 812
>gi|21735580 oxysterol-binding protein-like protein 3 isoform b
[Homo sapiens]
Length = 856
Score = 33.1 bits (74), Expect = 0.27
Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 17/104 (16%)
Query: 150 GPSTSQTEASLSPPAKSTPLYFPYNQCSYEGRFEDDRSDSSSSLLSLKFRSEERPVKKRK 209
G S+S +P K Y+ + Q + E D S S +FR ++R +++
Sbjct: 731 GGSSSACVWRANPMPKGYEQYYSFTQFALELNEMDPSSKSLLPPTDTRFRPDQRFLEEGN 790
Query: 210 VQSCHLQKKQLRLLEAMVEEQRRLSRAVEETCREVRRVLDQQHI 253
++ +QK++ +E+ RE RRVL++ H+
Sbjct: 791 LEEAEIQKQR-----------------IEQLQRERRRVLEENHV 817
>gi|14149704 oxysterol-binding protein-like protein 3 isoform a
[Homo sapiens]
Length = 887
Score = 33.1 bits (74), Expect = 0.27
Identities = 24/104 (23%), Positives = 45/104 (43%), Gaps = 17/104 (16%)
Query: 150 GPSTSQTEASLSPPAKSTPLYFPYNQCSYEGRFEDDRSDSSSSLLSLKFRSEERPVKKRK 209
G S+S +P K Y+ + Q + E D S S +FR ++R +++
Sbjct: 762 GGSSSACVWRANPMPKGYEQYYSFTQFALELNEMDPSSKSLLPPTDTRFRPDQRFLEEGN 821
Query: 210 VQSCHLQKKQLRLLEAMVEEQRRLSRAVEETCREVRRVLDQQHI 253
++ +QK++ +E+ RE RRVL++ H+
Sbjct: 822 LEEAEIQKQR-----------------IEQLQRERRRVLEENHV 848
>gi|52426745 Cas-Br-M (murine) ecotropic retroviral transforming
sequence [Homo sapiens]
Length = 906
Score = 32.3 bits (72), Expect = 0.47
Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 6/89 (6%)
Query: 119 PPDWPYYLAIDGILAKVPESCD-GKLP--DSQPPGPSTSQTEASLSPPAKSTPLYFPYNQ 175
PPD PY + + + P C G P D PP PS+ ++ L P P+ P +
Sbjct: 547 PPDRPYSVGAESRPQRRPLPCTPGDCPSRDKLPPVPSSRLGDSWLPRPIPKVPVSAPSSS 606
Query: 176 CSYEGRFEDDRSDSSSSLLSLKFRSEERP 204
+ GR + ++ S SL + E RP
Sbjct: 607 DPWTGR---ELTNRHSLPFSLPSQMEPRP 632
>gi|169208458 PREDICTED: similar to golgi autoantigen, golgin
subfamily a-like [Homo sapiens]
Length = 432
Score = 32.3 bits (72), Expect = 0.47
Identities = 18/86 (20%), Positives = 44/86 (51%)
Query: 190 SSSLLSLKFRSEERPVKKRKVQSCHLQKKQLRLLEAMVEEQRRLSRAVEETCREVRRVLD 249
++ +LSL R +E +++++ + +++ E + E++ RL E C + +
Sbjct: 186 NNQMLSLLNRRQEERLREQEERLREQEERLCEQEERLCEQEERLREQEERLCEQEKLPGQ 245
Query: 250 QQHILQVQSLQLQERMMSLLERIITK 275
++ + +V+ L QER ER++ +
Sbjct: 246 ERLLEEVEKLLKQERRQEEQERLLER 271
Score = 28.1 bits (61), Expect = 8.8
Identities = 21/88 (23%), Positives = 43/88 (48%), Gaps = 12/88 (13%)
Query: 197 KFRSEERPVKKRKVQSCHLQKKQLRLLEAMVEE-----QRRLSRAVEETCREVRRVLDQQ 251
+ R +E + +++ + C +++ E + E+ Q RL VE+ ++ RR +Q+
Sbjct: 207 RLREQEERLCEQEERLCEQEERLREQEERLCEQEKLPGQERLLEEVEKLLKQERRQEEQE 266
Query: 252 HILQ-------VQSLQLQERMMSLLERI 272
+L+ V+ L QER+ ER+
Sbjct: 267 RLLERERLLDEVEELLEQERLRQQDERL 294
>gi|41322923 plectin 1 isoform 11 [Homo sapiens]
Length = 4547
Score = 32.3 bits (72), Expect = 0.47
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 183 EDDRSDSSSSLLSLKFRSEERPVKKRKVQS------CHLQKKQLRLLEAMVEEQRRLSRA 236
E R + L +L+ R+EE +KR+ Q +Q + R +A VE R+ +A
Sbjct: 1465 ERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASRV-KA 1523
Query: 237 VEETCREVRRVLDQQHILQVQSLQLQERM 265
E RE +R L L++Q+ + + R+
Sbjct: 1524 EAEAAREKQRALQALEELRLQAEEAERRL 1552
>gi|41322914 plectin 1 isoform 10 [Homo sapiens]
Length = 4551
Score = 32.3 bits (72), Expect = 0.47
Identities = 25/89 (28%), Positives = 43/89 (48%), Gaps = 7/89 (7%)
Query: 183 EDDRSDSSSSLLSLKFRSEERPVKKRKVQS------CHLQKKQLRLLEAMVEEQRRLSRA 236
E R + L +L+ R+EE +KR+ Q +Q + R +A VE R+ +A
Sbjct: 1469 ERQRGGAEGELQALRARAEEAEAQKRQAQEEAERLRRQVQDESQRKRQAEVELASRV-KA 1527
Query: 237 VEETCREVRRVLDQQHILQVQSLQLQERM 265
E RE +R L L++Q+ + + R+
Sbjct: 1528 EAEAAREKQRALQALEELRLQAEEAERRL 1556
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.315 0.129 0.372
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,351,964
Number of Sequences: 37866
Number of extensions: 548238
Number of successful extensions: 4134
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 135
Number of HSP's that attempted gapping in prelim test: 3914
Number of HSP's gapped (non-prelim): 390
length of query: 278
length of database: 18,247,518
effective HSP length: 101
effective length of query: 177
effective length of database: 14,423,052
effective search space: 2552880204
effective search space used: 2552880204
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 61 (28.1 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.