Search of human proteins with 169213920

Search of human proteins with 169213920

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169213920 PREDICTED: hypothetical protein isoform 2 [Homo
sapiens]
         (198 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169213922 PREDICTED: hypothetical protein isoform 1 [Homo sap...   400   e-112
gi|169213920 PREDICTED: hypothetical protein isoform 2 [Homo sap...   400   e-112
gi|169214343 PREDICTED: hypothetical protein [Homo sapiens]           400   e-112
gi|169213300 PREDICTED: hypothetical protein [Homo sapiens]           399   e-111
gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]        50   1e-06
gi|239744133 PREDICTED: hypothetical protein [Homo sapiens]            46   2e-05
gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]           44   7e-05
gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]           44   7e-05
gi|239755326 PREDICTED: hypothetical protein [Homo sapiens]            43   2e-04
gi|188219762 denticleless homolog [Homo sapiens]                       40   0.001
gi|133922600 splicing factor, arginine/serine-rich 16 [Homo sapi...    40   0.001
gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens]           40   0.002
gi|239744491 PREDICTED: hypothetical protein XP_002343164 [Homo ...    39   0.004
gi|50083281 KIAA1853 protein [Homo sapiens]                            38   0.005
gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo ...    37   0.011
gi|239752939 PREDICTED: hypothetical protein [Homo sapiens]            37   0.011
gi|239747479 PREDICTED: hypothetical protein XP_002347544 [Homo ...    37   0.011
gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo ...    37   0.011
gi|239741351 PREDICTED: hypothetical protein XP_002342181 [Homo ...    37   0.011
gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]         37   0.014
gi|23111062 splicing factor, arginine/serine-rich 8 [Homo sapiens]     37   0.014
gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens]           36   0.019
gi|85838513 pantothenate kinase 2 isoform 1 preproprotein [Homo ...    36   0.024
gi|50409691 SRp25 nuclear protein isoform 4 [Homo sapiens]             36   0.024
gi|50409707 SRp25 nuclear protein isoform 2 [Homo sapiens]             36   0.024
gi|4759098 splicing factor, arginine/serine-rich 10 [Homo sapiens]     35   0.032
gi|126723149 chromosome 19 open reading frame 29 [Homo sapiens]        35   0.032
gi|122937392 chromosome 19 open reading frame 29 [Homo sapiens]        35   0.032
gi|119226260 calcium homeostasis endoplasmic reticulum protein [...    35   0.032
gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]         35   0.032

>gi|169213922 PREDICTED: hypothetical protein isoform 1 [Homo
           sapiens]
          Length = 198

 Score =  400 bits (1029), Expect = e-112
 Identities = 198/198 (100%), Positives = 198/198 (100%)

Query: 1   MSSTRGSNQLLRRAWKASACRRICWACSSSLARTSATCSFTSSRRSRVRLPISSIRARSR 60
           MSSTRGSNQLLRRAWKASACRRICWACSSSLARTSATCSFTSSRRSRVRLPISSIRARSR
Sbjct: 1   MSSTRGSNQLLRRAWKASACRRICWACSSSLARTSATCSFTSSRRSRVRLPISSIRARSR 60

Query: 61  SPQAWARSCSGWPAREPTVAARTRPCSTRGPRRSRMALRPRSAPSRAPAWYTARRFCRSS 120
           SPQAWARSCSGWPAREPTVAARTRPCSTRGPRRSRMALRPRSAPSRAPAWYTARRFCRSS
Sbjct: 61  SPQAWARSCSGWPAREPTVAARTRPCSTRGPRRSRMALRPRSAPSRAPAWYTARRFCRSS 120

Query: 121 ASRRSRLRSLRRWEARRTRSSSVLWPSMACTSPRYCTRRPRTSSMSAPSRACAACSSLDS 180
           ASRRSRLRSLRRWEARRTRSSSVLWPSMACTSPRYCTRRPRTSSMSAPSRACAACSSLDS
Sbjct: 121 ASRRSRLRSLRRWEARRTRSSSVLWPSMACTSPRYCTRRPRTSSMSAPSRACAACSSLDS 180

Query: 181 RARVSSATGVSCSSSSDL 198
           RARVSSATGVSCSSSSDL
Sbjct: 181 RARVSSATGVSCSSSSDL 198


>gi|169213920 PREDICTED: hypothetical protein isoform 2 [Homo
           sapiens]
          Length = 198

 Score =  400 bits (1029), Expect = e-112
 Identities = 198/198 (100%), Positives = 198/198 (100%)

Query: 1   MSSTRGSNQLLRRAWKASACRRICWACSSSLARTSATCSFTSSRRSRVRLPISSIRARSR 60
           MSSTRGSNQLLRRAWKASACRRICWACSSSLARTSATCSFTSSRRSRVRLPISSIRARSR
Sbjct: 1   MSSTRGSNQLLRRAWKASACRRICWACSSSLARTSATCSFTSSRRSRVRLPISSIRARSR 60

Query: 61  SPQAWARSCSGWPAREPTVAARTRPCSTRGPRRSRMALRPRSAPSRAPAWYTARRFCRSS 120
           SPQAWARSCSGWPAREPTVAARTRPCSTRGPRRSRMALRPRSAPSRAPAWYTARRFCRSS
Sbjct: 61  SPQAWARSCSGWPAREPTVAARTRPCSTRGPRRSRMALRPRSAPSRAPAWYTARRFCRSS 120

Query: 121 ASRRSRLRSLRRWEARRTRSSSVLWPSMACTSPRYCTRRPRTSSMSAPSRACAACSSLDS 180
           ASRRSRLRSLRRWEARRTRSSSVLWPSMACTSPRYCTRRPRTSSMSAPSRACAACSSLDS
Sbjct: 121 ASRRSRLRSLRRWEARRTRSSSVLWPSMACTSPRYCTRRPRTSSMSAPSRACAACSSLDS 180

Query: 181 RARVSSATGVSCSSSSDL 198
           RARVSSATGVSCSSSSDL
Sbjct: 181 RARVSSATGVSCSSSSDL 198


>gi|169214343 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 198

 Score =  400 bits (1029), Expect = e-112
 Identities = 198/198 (100%), Positives = 198/198 (100%)

Query: 1   MSSTRGSNQLLRRAWKASACRRICWACSSSLARTSATCSFTSSRRSRVRLPISSIRARSR 60
           MSSTRGSNQLLRRAWKASACRRICWACSSSLARTSATCSFTSSRRSRVRLPISSIRARSR
Sbjct: 1   MSSTRGSNQLLRRAWKASACRRICWACSSSLARTSATCSFTSSRRSRVRLPISSIRARSR 60

Query: 61  SPQAWARSCSGWPAREPTVAARTRPCSTRGPRRSRMALRPRSAPSRAPAWYTARRFCRSS 120
           SPQAWARSCSGWPAREPTVAARTRPCSTRGPRRSRMALRPRSAPSRAPAWYTARRFCRSS
Sbjct: 61  SPQAWARSCSGWPAREPTVAARTRPCSTRGPRRSRMALRPRSAPSRAPAWYTARRFCRSS 120

Query: 121 ASRRSRLRSLRRWEARRTRSSSVLWPSMACTSPRYCTRRPRTSSMSAPSRACAACSSLDS 180
           ASRRSRLRSLRRWEARRTRSSSVLWPSMACTSPRYCTRRPRTSSMSAPSRACAACSSLDS
Sbjct: 121 ASRRSRLRSLRRWEARRTRSSSVLWPSMACTSPRYCTRRPRTSSMSAPSRACAACSSLDS 180

Query: 181 RARVSSATGVSCSSSSDL 198
           RARVSSATGVSCSSSSDL
Sbjct: 181 RARVSSATGVSCSSSSDL 198


>gi|169213300 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 198

 Score =  399 bits (1024), Expect = e-111
 Identities = 197/198 (99%), Positives = 197/198 (99%)

Query: 1   MSSTRGSNQLLRRAWKASACRRICWACSSSLARTSATCSFTSSRRSRVRLPISSIRARSR 60
           MSSTRGSNQLLRRAWKASACRRICWACSSSLARTSATCSFTSSRRSRVRLPISSIRARSR
Sbjct: 1   MSSTRGSNQLLRRAWKASACRRICWACSSSLARTSATCSFTSSRRSRVRLPISSIRARSR 60

Query: 61  SPQAWARSCSGWPAREPTVAARTRPCSTRGPRRSRMALRPRSAPSRAPAWYTARRFCRSS 120
           SPQAWARSCSGWPAREPTVAARTRPCSTRGPRRSRMALRPRSAPSRAPAWYTARRFCRSS
Sbjct: 61  SPQAWARSCSGWPAREPTVAARTRPCSTRGPRRSRMALRPRSAPSRAPAWYTARRFCRSS 120

Query: 121 ASRRSRLRSLRRWEARRTRSSSVLWPSMACTSPRYCTRRPRTSSMSAPSRACAACSSLDS 180
           ASRRSRLRSLRRWEARRTRSSSVLWPSMACTSPRYCTRRP TSSMSAPSRACAACSSLDS
Sbjct: 121 ASRRSRLRSLRRWEARRTRSSSVLWPSMACTSPRYCTRRPHTSSMSAPSRACAACSSLDS 180

Query: 181 RARVSSATGVSCSSSSDL 198
           RARVSSATGVSCSSSSDL
Sbjct: 181 RARVSSATGVSCSSSSDL 198


>gi|118572613 splicing coactivator subunit SRm300 [Homo sapiens]
          Length = 2752

 Score = 50.4 bits (119), Expect = 1e-06
 Identities = 58/188 (30%), Positives = 82/188 (43%), Gaps = 13/188 (6%)

Query: 6   GSNQLLRRAWKASACRRICWACSSSLARTSATCSFTSSRRSRVRLPISSIRARSRSPQAW 65
           G ++  +R  ++ + +R  W+ S +  R   + S    R S  R P +  R+RSR+P   
Sbjct: 523 GRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGR-SHSRSPATRGRSRSRTPARR 581

Query: 66  ARSCSGWPAREPTVA-------ARTRPCSTRGPRRSRMALRPRSAPSRAPAWYTARRFCR 118
            RS S  PAR  + +       +R+R  + RG  RSR   R RS  +R+P     RR  R
Sbjct: 582 GRSRSRTPARRRSRSRTPTRRRSRSRTPARRGRSRSRTPARRRSR-TRSPV----RRRSR 636

Query: 119 SSASRRSRLRSLRRWEARRTRSSSVLWPSMACTSPRYCTRRPRTSSMSAPSRACAACSSL 178
           S +  R   RS  R  ARR RS S        +  R   RR   S    P+R   + S  
Sbjct: 637 SRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSRTPARRGRSRSRT 696

Query: 179 DSRARVSS 186
             R R  S
Sbjct: 697 PRRGRSRS 704



 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 52/162 (32%), Positives = 72/162 (44%), Gaps = 19/162 (11%)

Query: 33   RTSATCSFTSSRRSRVRLP-ISSIRARSRSPQAWARSCSGWPAREPTVAARTRPCSTRGP 91
            R+ +  S  S RRSR R P ++  R+RSR+P    RS S  P   P    R+R   +R P
Sbjct: 1910 RSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSRSRTP---PVTRRRSR---SRTP 1963

Query: 92   RRSRMALRPRSAP-----SRAPAWYTARRFCRSSASRRSRLRSLRRWEARRTRSSSVLWP 146
              +R   R R++P     SR+      RR  RS  S  +R RS       R+R+S V   
Sbjct: 1964 PVTRRRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRS-------RSRTSPVTRR 2016

Query: 147  SMACTSPRYCTRRPRTSSMSAPSRACAACSSLDSRARVSSAT 188
                 +P    RR R+ +   P +   + S L  R R  S T
Sbjct: 2017 RSRSRTPPAIRRRSRSRTPLLPRKRSRSRSPLAIRRRSRSRT 2058



 Score = 43.9 bits (102), Expect = 9e-05
 Identities = 62/204 (30%), Positives = 93/204 (45%), Gaps = 21/204 (10%)

Query: 4   TRGSNQLLRRAWKASACRRICWACSSSLARTSATCSFTSSR--RSRVRLPI-SSIRARSR 60
           +R  + + RR+   S  RR   + S + AR   + S T +R  RSR R P   S R+RSR
Sbjct: 625 SRTRSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRSRTPARRSGRSRSR 684

Query: 61  SPQAWARSCSGWPAREPTVAARTRPCSTRGPRRSRMAL---RPRSAPSRAPAWYTARRFC 117
           +P    RS S  P R     +R+R    RG   SR      R  S+  R     T++R  
Sbjct: 685 TPARRGRSRSRTPRRG---RSRSRSLVRRGRSHSRTPQRRGRSGSSSERKNKSRTSQRRS 741

Query: 118 RSSAS---RRSRLRSLRRWEARRTRSSS----VLWPSMACTSPRYCTRRPRTSSMSAPSR 170
           RS++S   ++SR+ S R       RS +     L  S++ +SP  C   P+  S + P R
Sbjct: 742 RSNSSPEMKKSRISSRRSRSLSSPRSKAKSRLSLRRSLSGSSP--C---PKQKSQTPPRR 796

Query: 171 ACAACSSLDSRARVSSATGVSCSS 194
           + +  S   +++R       S SS
Sbjct: 797 SRSGSSQPKAKSRTPPRRSRSSSS 820



 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 57/164 (34%), Positives = 69/164 (42%), Gaps = 17/164 (10%)

Query: 39  SFTSSRRSRVRLPISSIRARSRSPQ--AWARSCSGWPAREPTVAAR----TRPCSTRGPR 92
           S ++ R  R R P    R RSRSPQ   W+RS +         A R    +R  +TRG  
Sbjct: 516 SRSAQRWGRSRSP--QRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSRSPATRGRS 573

Query: 93  RSRMALRPRSAPSRAPAWYTARRFCRSSASRRSRLRSLRRWEARRTRSSSVLWPSMACTS 152
           RSR   R   + SR P    ARR  RS    R R RS  R  ARR RS S         +
Sbjct: 574 RSRTPARRGRSRSRTP----ARRRSRSRTPTRRRSRS--RTPARRGRSRSRTPARRRSRT 627

Query: 153 PRYCTRRPRTSS---MSAPSRACAACSSLDSRARVSSATGVSCS 193
                RR R+ S    S  SR+        SR+R  +  G S S
Sbjct: 628 RSPVRRRSRSRSPARRSGRSRSRTPARRGRSRSRTPARRGRSRS 671



 Score = 42.4 bits (98), Expect = 3e-04
 Identities = 59/167 (35%), Positives = 72/167 (43%), Gaps = 24/167 (14%)

Query: 39   SFTSSRRSRVRL---PISSIRARSR-SPQAWARSCS-GWPA-------REPTVA-----A 81
            S TSSRR R R    P S  R+RSR SP  W RS S   PA       R P ++     +
Sbjct: 1831 SRTSSRRRRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRS 1890

Query: 82   RTRPCSTRGPRRSRMALRPRSAPSRAPAWYTARRFCRSSASRRSRLRSLRRWEARRTRSS 141
            RT P S R  R      R RS   R+ A   +RR  RS     +R RS  R    R RS 
Sbjct: 1891 RTSPVSRRRSRSRTSVTRRRS---RSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRSR 1947

Query: 142  SVLWPSMACTSPRYCTRRPRTSSMSAPSRACAACSSLDSRARVSSAT 188
            S   P    T  R  +R P  +   + SR  +  +   SR+R S  T
Sbjct: 1948 SRTPP---VTRRRSRSRTPPVTRRRSRSRT-SPITRRRSRSRTSPVT 1990



 Score = 40.8 bits (94), Expect = 8e-04
 Identities = 54/164 (32%), Positives = 71/164 (43%), Gaps = 12/164 (7%)

Query: 33   RTSATCSFTSSRRSRVRLP-ISSIRARSR-SPQAWARSCSGWPAREPTVAARTRPCSTRG 90
            R+ +  S  + RRSR R P IS  R+RSR SP +  RS S          +R  P S R 
Sbjct: 1863 RSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSRASPVSRRR 1922

Query: 91   PRRSRMALRPRSAPSRAPAWYTARRFCRSS----ASRRSRLRS--LRRWEARRTRSSSVL 144
             R     +  R + SR P   T RR  RS       RRSR R+  + R  +R   S    
Sbjct: 1923 SRSRTPPVTRRRSRSRTP---TTRRRSRSRTPPVTRRRSRSRTPPVTRRRSRSRTSPITR 1979

Query: 145  WPSMACTSPRYCTRRPRTSSMSAPSRACAACSSLDSRARVSSAT 188
              S + TSP    RR R+ +     R   + +S  +R R  S T
Sbjct: 1980 RRSRSRTSP-VTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRT 2022



 Score = 38.9 bits (89), Expect = 0.003
 Identities = 55/189 (29%), Positives = 82/189 (43%), Gaps = 22/189 (11%)

Query: 13  RAWKASACRRICWACSSSLARTSATCSFTSSR-RSRVRLPISSIRARSRSPQAWARSCSG 71
           R+   +  RR   + S + AR   + S T  R RSR R  +   R+ SR+PQ   RS S 
Sbjct: 668 RSRSRTPARRSGRSRSRTPARRGRSRSRTPRRGRSRSRSLVRRGRSHSRTPQRRGRSGS- 726

Query: 72  WPAREPTVAARTRPCSTRGPRRSRMALRPRSAPSRAPAWYTARRFCRSSASRRSRLRSLR 131
                   ++  +  S    RRSR    P    SR      + R  RS +S RS+ +S  
Sbjct: 727 --------SSERKNKSRTSQRRSRSNSSPEMKKSR-----ISSRRSRSLSSPRSKAKS-- 771

Query: 132 RWEARRTRSSSVLWPSMACTSP----RYCTRRPRTSSMSAPSRACAACSSLDSRARVSSA 187
           R   RR+ S S   P     +P    R  + +P+  S + P R+  + SS   + +  + 
Sbjct: 772 RLSLRRSLSGSSPCPKQKSQTPPRRSRSGSSQPKAKSRTPPRRS-RSSSSPPPKQKSKTP 830

Query: 188 TGVSCSSSS 196
           +  S SSSS
Sbjct: 831 SRQSHSSSS 839



 Score = 38.1 bits (87), Expect = 0.005
 Identities = 46/153 (30%), Positives = 69/153 (45%), Gaps = 10/153 (6%)

Query: 43  SRRSRVRLPISSIRARSRSPQAWARSCSGWPAREPTVAARTRPCSTRGPRRSRMALRPRS 102
           S R     P S  R+  R+ +   +S S  P+R     +R+   + RG  RSR   +   
Sbjct: 449 SHREISSSPTSKNRSHGRAKRD--KSHSHTPSRRMG-RSRSPATAKRGRSRSRTPTKRGH 505

Query: 103 APSRAPAW---YTARRFCRS-SASRRSRLRSLRRWEARRTRSSSVLWPSMACTSPRYCTR 158
           + SR+P W    +A+R+ RS S  RR R RS +R    R+R++     S +    R  +R
Sbjct: 506 SRSRSPQWRRSRSAQRWGRSRSPQRRGRSRSPQRPGWSRSRNTQRRGRSRSARRGRSHSR 565

Query: 159 RPRTSSMS---APSRACAACSSLDSRARVSSAT 188
            P T   S    P+R   + S   +R R  S T
Sbjct: 566 SPATRGRSRSRTPARRGRSRSRTPARRRSRSRT 598



 Score = 36.6 bits (83), Expect = 0.014
 Identities = 49/132 (37%), Positives = 59/132 (44%), Gaps = 13/132 (9%)

Query: 44   RRSRVRL-PISSIRARSR-SPQAWARSCSGW-PAREPTVAARTRPCSTRGPR-RSRMALR 99
            RRSR R  PI+  R+RSR SP    RS S   P       +RT P + R  R R+  A+R
Sbjct: 1968 RRSRSRTSPITRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTSPVTRRRSRSRTPPAIR 2027

Query: 100  PRSAPSRAPAWYTARRFCRSSASRRSRLRSLRRWEARRTRSSSVLWPSMACTSPRYCTRR 159
             RS  SR P     R   RS  + R R RS     AR  RS +         SP    RR
Sbjct: 2028 RRSR-SRTPLLPRKRSRSRSPLAIRRRSRSRTPRTARGKRSLT--------RSPPAIRRR 2078

Query: 160  PRTSSMSAPSRA 171
              + S S  SR+
Sbjct: 2079 SASGSSSDRSRS 2090



 Score = 34.3 bits (77), Expect = 0.071
 Identities = 50/185 (27%), Positives = 67/185 (36%), Gaps = 28/185 (15%)

Query: 29   SSLARTSATCSFTSSRRSRVRLPISSIRARSRSPQAWARSCSGWPAREPTVAARTRPCST 88
            SS  R SA+   T +   R R P    R   RS     R       +  T   R R  S+
Sbjct: 1741 SSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRRE------KTRTTRRRDRSGSS 1794

Query: 89   RGPRRSRMALRPRSAP-----------SRAPAWYTA------RRFCRSSASRRSRLRSLR 131
            +   R R   R RS             SR+PA   +      RR  RS     SR RS  
Sbjct: 1795 QSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRRRRGRSRTPPTSRKRSRS 1854

Query: 132  R-----WEARRTRSSSVLWPSMACTSPRYCTRRPRTSSMSAPSRACAACSSLDSRARVSS 186
            R     W+  R+R+S          +P    RR R+ +     R   + +S+  R   S 
Sbjct: 1855 RTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSRRRSRSRTSVTRRRSRSR 1914

Query: 187  ATGVS 191
            A+ VS
Sbjct: 1915 ASPVS 1919



 Score = 33.5 bits (75), Expect = 0.12
 Identities = 34/114 (29%), Positives = 50/114 (43%), Gaps = 11/114 (9%)

Query: 52  ISSIRARSRSPQAWARSCSGWPAREPTVAART---RPCSTRGPRRSRMALRPRSAPSRA- 107
           I+S +A  +S     RSC    + +P + +RT     CS   P R + +  PR +PSR+ 
Sbjct: 855 ITSPQANEQSVTPQRRSCFE-SSPDPELKSRTPSRHSCSGSSPPRVKSSTPPRQSPSRSS 913

Query: 108 ------PAWYTARRFCRSSASRRSRLRSLRRWEARRTRSSSVLWPSMACTSPRY 155
                  A  + R+   S +S  S  R   R   RR+RS S      +   PRY
Sbjct: 914 SPQPKVKAIISPRQRSHSGSSSPSPSRVTSRTTPRRSRSVSPCSNVESRLLPRY 967



 Score = 33.1 bits (74), Expect = 0.16
 Identities = 49/169 (28%), Positives = 68/169 (40%), Gaps = 10/169 (5%)

Query: 13   RAWKASACRRICWACSSSLARTSATCSFTSSRRSRVRLPISSIRARSRSPQAWARSCS-- 70
            R  K    RR   + SS         S + SR +R R   S   +RS + Q  +R+ S  
Sbjct: 1778 RREKTRTTRRRDRSGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRSPARQESSRTSSRR 1837

Query: 71   --GWPAREPTVAARTRPCSTRGP-RRSRMALRP---RSAPSRAPAWYTARRFCRSSASRR 124
              G     PT   R+R  ++  P +RSR    P   R + SR P     R   R+S   R
Sbjct: 1838 RRGRSRTPPTSRKRSRSRTSPAPWKRSRSRASPATHRRSRSRTPLISRRRSRSRTSPVSR 1897

Query: 125  SRLRSLRRWEARRTRS--SSVLWPSMACTSPRYCTRRPRTSSMSAPSRA 171
             R RS      RR+RS  S V        +P    RR R+ + +   R+
Sbjct: 1898 RRSRSRTSVTRRRSRSRASPVSRRRSRSRTPPVTRRRSRSRTPTTRRRS 1946



 Score = 31.6 bits (70), Expect = 0.46
 Identities = 45/154 (29%), Positives = 61/154 (39%), Gaps = 19/154 (12%)

Query: 29   SSLARTSATCSFTSSRRSRVRLPISSIRARSRSPQAWARSCSGWPAREPTVAARTRPCST 88
            SS +    T     SRRSR     SS   RSR+P    RS        P+V++      +
Sbjct: 1690 SSRSSPELTRKARLSRRSRSAS--SSPETRSRTPPRHRRS--------PSVSSPEPAEKS 1739

Query: 89   RGPRRSRMALRPRSAPSRAPAWYTARRFCRSSASRRSRLRSLRRWEARRTRSSSVLWPSM 148
            R  RR R A  PR+         T+RR    S   R   RS  R    +TR++       
Sbjct: 1740 RSSRRRRSASSPRTKT-------TSRRGRSPSPKPRGLQRSRSRSRREKTRTTR--RRDR 1790

Query: 149  ACTSPRYCTRRPRTSSMSAPSRACAACSSLDSRA 182
            + +S     RR R+ S S  +R     S   SR+
Sbjct: 1791 SGSSQSTSRRRQRSRSRSRVTRRRRGGSGYHSRS 1824



 Score = 30.4 bits (67), Expect = 1.0
 Identities = 27/95 (28%), Positives = 41/95 (43%), Gaps = 17/95 (17%)

Query: 30  SLARTSATCSFTSSRRSR---VRLPISSIRARSRSPQAWARSCSGWPAREPTVAARTRPC 86
           S +  SA+ S TS  RSR    +   +++  RS SP +  R     P  EP   +  RP 
Sbjct: 263 STSADSASSSDTSRSRSRSAAAKTHTTALAGRSPSPASGRRGEGDAPFSEPGTTSTQRPS 322

Query: 87  S----TRGP----------RRSRMALRPRSAPSRA 107
           S    T+ P          ++ + A RP  +P R+
Sbjct: 323 SPETATKQPSSPYEDKDKDKKEKSATRPSPSPERS 357



 Score = 29.6 bits (65), Expect = 1.8
 Identities = 42/148 (28%), Positives = 65/148 (43%), Gaps = 25/148 (16%)

Query: 61   SPQAWARSCSGWPAREPTVAA---RTRPCST---RGPRRSRMALRPRSAPSRAPAWYTAR 114
            +P+A + S S    + P   A   R+R  S+   RGP     +    S+P   P   TAR
Sbjct: 1611 APRAQSGSDSSPEPKAPAPRALPRRSRSGSSSKGRGPSPEGSS-STESSPEHPPKSRTAR 1669

Query: 115  RFCRSSASRRSRLRSLRRWE--------------ARRTRSSSVLWPSMACTSPRYCTRRP 160
            R  RSS   +++ R+  R                +RR+RS+S    + + T PR+     
Sbjct: 1670 RGSRSSPEPKTKSRTPPRRRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRH----R 1725

Query: 161  RTSSMSAPSRACAACSSLDSRARVSSAT 188
            R+ S+S+P  A  + SS   R+  S  T
Sbjct: 1726 RSPSVSSPEPAEKSRSSRRRRSASSPRT 1753



 Score = 29.3 bits (64), Expect = 2.3
 Identities = 36/138 (26%), Positives = 59/138 (42%), Gaps = 7/138 (5%)

Query: 56   RARSRSPQAWARSCSGWP--AREPTVAARTRPCSTRGPRRSRMALRPRSAPSRAPAWYTA 113
            + +SR+P    RS    P   R+  ++ R+R  S+    RSR   R R +PS +    + 
Sbjct: 1679 KTKSRTPPR-RRSSRSSPELTRKARLSRRSRSASSSPETRSRTPPRHRRSPSVS----SP 1733

Query: 114  RRFCRSSASRRSRLRSLRRWEARRTRSSSVLWPSMACTSPRYCTRRPRTSSMSAPSRACA 173
                +S +SRR R  S  R +    R  S           R  +RR +T +     R+ +
Sbjct: 1734 EPAEKSRSSRRRRSASSPRTKTTSRRGRSPSPKPRGLQRSRSRSRREKTRTTRRRDRSGS 1793

Query: 174  ACSSLDSRARVSSATGVS 191
            + S+   R R  S + V+
Sbjct: 1794 SQSTSRRRQRSRSRSRVT 1811


>gi|239744133 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 375

 Score = 45.8 bits (107), Expect = 2e-05
 Identities = 45/174 (25%), Positives = 75/174 (43%), Gaps = 10/174 (5%)

Query: 26  ACSSSLARTSATCSFTSSRRSRVRLPISSIRARS----RSPQAWARSCSGWPAREPTVAA 81
           +CS   +RTS+TCS  +SR S       S R  S    +S    + SC+   +R     +
Sbjct: 132 SCSCQSSRTSSTCSCQTSRTSSTSCSYQSSRTSSTCSCQSSGTSSTSCNWQSSR----TS 187

Query: 82  RTRPCSTRGPRRSRMALRPRSAPSRAPAWYTARRFCRSSASRRSRLRSLRRWEARRTRSS 141
            T  C + G   +  + +  S  S   +  ++     S + + S   S    ++  T S+
Sbjct: 188 STCSCQSSGTSSTSYSCQS-SGTSSTCSCQSSGTSSTSCSCQSSGTSSTCSCQSSGTSST 246

Query: 142 SVLWPSMACTSPRYCTRRPRTSSMSAPSRACAACSSLDSRARVSSATGVSCSSS 195
           S  W S   +S   C +  RTSS S   ++    S+   ++  +S+T  SC SS
Sbjct: 247 SCSWQSSRTSSTCSC-QSSRTSSTSCSCQSSGTSSTCSCQSSGTSSTSCSCQSS 299



 Score = 39.3 bits (90), Expect = 0.002
 Identities = 52/185 (28%), Positives = 74/185 (40%), Gaps = 20/185 (10%)

Query: 26  ACSSSLARTSATCSFTSSRRSRVRLPISSIRARSRSPQAWARSCSGWPAREPTVAARTRP 85
           +CS   +RTS+TC   SSR S       S R  S S    +   S   + + +  + T  
Sbjct: 97  SCSWQFSRTSSTCRCQSSRTSSTSCSCQSSRTSSTSCSCQSSRTSSTCSCQTSRTSST-S 155

Query: 86  CSTRGPRRSRMALRPRSAPSRAPA-WYTARR----FCRSSAS-------RRSRLRSLRRW 133
           CS +  R S       S  S     W ++R      C+SS +       + S   S    
Sbjct: 156 CSYQSSRTSSTCSCQSSGTSSTSCNWQSSRTSSTCSCQSSGTSSTSYSCQSSGTSSTCSC 215

Query: 134 EARRTRSSSVLWPSMACTSPRYCTRRPRTSSMSA---PSRACAACSSLDSRARVSSATGV 190
           ++  T S+S    S   +S   C +   TSS S     SR  + CS   SR   +S+T  
Sbjct: 216 QSSGTSSTSCSCQSSGTSSTCSC-QSSGTSSTSCSWQSSRTSSTCSCQSSR---TSSTSC 271

Query: 191 SCSSS 195
           SC SS
Sbjct: 272 SCQSS 276



 Score = 39.3 bits (90), Expect = 0.002
 Identities = 55/199 (27%), Positives = 82/199 (41%), Gaps = 10/199 (5%)

Query: 2   SSTRGSNQLLRRAWKASA--CRRICWACSSSLARTSATCSFTSSRRSRVRLPISSIRARS 59
           SST  S Q  R +   S    R    +CS   +RTS+TCS  SS  S       S R  S
Sbjct: 129 SSTSCSCQSSRTSSTCSCQTSRTSSTSCSYQSSRTSSTCSCQSSGTSSTSCNWQSSRTSS 188

Query: 60  R-SPQAWARSCSGWPAREPTVAARTRPCSTRGPRRSRMALRPRSAPSRAPAWYTARRFCR 118
             S Q+   S + +  +    ++ T  C + G   +  + +  S  S   +  ++     
Sbjct: 189 TCSCQSSGTSSTSYSCQSSGTSS-TCSCQSSGTSSTSCSCQS-SGTSSTCSCQSSGTSST 246

Query: 119 SSASRRSRLRSLRRWEARRTRSSSVLWPSMACTSPRYC--TRRPRTSSMSAPSRACAACS 176
           S + + SR  S    ++ RT S+S    S   +S   C  +    TS     SR  + CS
Sbjct: 247 SCSWQSSRTSSTCSCQSSRTSSTSCSCQSSGTSSTCSCQSSGTSSTSCSCQSSRTSSTCS 306

Query: 177 SLDSRARVSSATGVSCSSS 195
              SR   +S+T  SC SS
Sbjct: 307 CQFSR---TSSTSCSCQSS 322



 Score = 34.3 bits (77), Expect = 0.071
 Identities = 43/175 (24%), Positives = 70/175 (40%), Gaps = 7/175 (4%)

Query: 26  ACSSSLARTSATCSFTSSRRSRVRLPISSIRARSRSPQAWARSCSGWPAREPTVAARTRP 85
           +CS   ++TS+TCS  SS+ S      SS  + +      +R  S    +    ++ +  
Sbjct: 17  SCSCQSSQTSSTCSCQSSQTSSTCSCQSSGTSSTSCNWQSSRISSTCSCQSSGTSSTSCS 76

Query: 86  CSTRGPRRSRMALRPRSAPSRAPAWYTAR--RFCRSSASRRSRLRSLRRWEARRTRSSSV 143
           C +     S  + +     S + +W  +R    CR  +SR S        ++ RT S+S 
Sbjct: 77  CQS-SETSSTCSCQSSGTSSTSCSWQFSRTSSTCRCQSSRTSSTSC--SCQSSRTSSTSC 133

Query: 144 LWPSMACTSPRYC--TRRPRTSSMSAPSRACAACSSLDSRARVSSATGVSCSSSS 196
              S   +S   C  +R   TS     SR  + CS   S    +S    S  +SS
Sbjct: 134 SCQSSRTSSTCSCQTSRTSSTSCSYQSSRTSSTCSCQSSGTSSTSCNWQSSRTSS 188



 Score = 27.3 bits (59), Expect = 8.7
 Identities = 26/91 (28%), Positives = 39/91 (42%), Gaps = 2/91 (2%)

Query: 2   SSTRGSNQLLRRAWKAS--ACRRICWACSSSLARTSATCSFTSSRRSRVRLPISSIRARS 59
           SST  S Q  R +   S  + R    +CS   + TS+TCS  SS  S       S R  S
Sbjct: 244 SSTSCSWQSSRTSSTCSCQSSRTSSTSCSCQSSGTSSTCSCQSSGTSSTSCSCQSSRTSS 303

Query: 60  RSPQAWARSCSGWPAREPTVAARTRPCSTRG 90
                ++R+ S   + + +  + T  C + G
Sbjct: 304 TCSCQFSRTSSTSCSCQSSRTSSTCSCQSSG 334


>gi|21040326 SON DNA-binding protein isoform F [Homo sapiens]
          Length = 2426

 Score = 44.3 bits (103), Expect = 7e-05
 Identities = 53/156 (33%), Positives = 67/156 (42%), Gaps = 10/156 (6%)

Query: 44   RRSRVRLPISSIRARSRSPQAWARSCSGWPAREPTVAARTRPCSTRGPRRSRMALRPRSA 103
            +RS  R    ++RARSR+P   +RS +    R      R R  S    RRSR   R    
Sbjct: 1907 KRSSSRDNRKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRT 1966

Query: 104  PSRAPAWYTARRFCRSSASRRSRLRSLR-RWEARRTRSSSVLWPSMACTSPRYCTRRPRT 162
            PSR     + R     + SRRSR  S R R  +RR RS SV+       SP    RR RT
Sbjct: 1967 PSRRSRTPSRR---SRTPSRRSRTPSRRSRTPSRRRRSRSVVRRRSFSISP-VRLRRSRT 2022

Query: 163  SSMSAPSRACAACSSLDSRARVSSATGVSCSSSSDL 198
                 P R   + S +  +   SS  G S    +DL
Sbjct: 2023 -----PLRRRFSRSPIRRKRSRSSERGRSPKRLTDL 2053



 Score = 37.0 bits (84), Expect = 0.011
 Identities = 49/166 (29%), Positives = 70/166 (42%), Gaps = 17/166 (10%)

Query: 28   SSSLARTSATCSFTSSRRSRVRLPISSIRARSRSPQAWARSCSGWPAREPTVAARTRPCS 87
            S +  R+S + S  S  RSR R       +RSRS     RS S    +E    +      
Sbjct: 1845 SRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVS----KEKRKRSPKHRSK 1900

Query: 88   TRGPRRSRMALRPRSAPSRAPAWYTARRFCRSSASRRSRLRSLRRWE------ARRTRSS 141
            +R  +R R + R      RA +   +RR    + SRR R RS+ R        +RR+R+ 
Sbjct: 1901 SRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRT- 1959

Query: 142  SVLWPSMACTSPRYCTRRP--RTSSMSAPSRACAACSSLDSRARVS 185
                PS    +P   +R P  R+ + S  SR  +  S   SR R S
Sbjct: 1960 ----PSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRS 2001



 Score = 32.3 bits (72), Expect = 0.27
 Identities = 37/99 (37%), Positives = 44/99 (44%), Gaps = 8/99 (8%)

Query: 39   SFTSSRRSRVRLPISSIRARSRSPQAWARSCSGWPAREPTVAARTRPCSTRGPRRSRMAL 98
            SF+ S   R R P    R  SR  +  +R       R  T + R+R  S R  RRSR  +
Sbjct: 1948 SFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRR--RRSRSVV 2005

Query: 99   RPRS---APSRAPAWYT--ARRFCRSSASRRSRLRSLRR 132
            R RS   +P R     T   RRF RS   RR R RS  R
Sbjct: 2006 RRRSFSISPVRLRRSRTPLRRRFSRSPI-RRKRSRSSER 2043



 Score = 30.0 bits (66), Expect = 1.3
 Identities = 38/142 (26%), Positives = 53/142 (37%), Gaps = 21/142 (14%)

Query: 30   SLARTSATCSFTSSRRSRVRLPISSIRARSRSPQAWARSCSGWPAREPTVAARTRPCSTR 89
            S  R+ +  S +S  +SR R   S  RAR RS                     ++  S R
Sbjct: 1820 SSLRSRSKRSKSSEHKSRKRTSESRSRARKRS---------------------SKSKSHR 1858

Query: 90   GPRRSRMALRPRSAPSRAPAWYTARRFCRSSASRRSRLRSLRRWEARRTRSSSVLWPSMA 149
               RSR   R R   SR+ +    RR       +RS     +  E +R RSSS       
Sbjct: 1859 SQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV 1918

Query: 150  CTSPRYCTRRPRTSSMSAPSRA 171
                R  +RR R+ + S   R+
Sbjct: 1919 RARSRTPSRRSRSHTPSRRRRS 1940


>gi|21040314 SON DNA-binding protein isoform B [Homo sapiens]
          Length = 2303

 Score = 44.3 bits (103), Expect = 7e-05
 Identities = 53/156 (33%), Positives = 67/156 (42%), Gaps = 10/156 (6%)

Query: 44   RRSRVRLPISSIRARSRSPQAWARSCSGWPAREPTVAARTRPCSTRGPRRSRMALRPRSA 103
            +RS  R    ++RARSR+P   +RS +    R      R R  S    RRSR   R    
Sbjct: 1907 KRSSSRDNRKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRTPSRRSRT 1966

Query: 104  PSRAPAWYTARRFCRSSASRRSRLRSLR-RWEARRTRSSSVLWPSMACTSPRYCTRRPRT 162
            PSR     + R     + SRRSR  S R R  +RR RS SV+       SP    RR RT
Sbjct: 1967 PSRRSRTPSRR---SRTPSRRSRTPSRRSRTPSRRRRSRSVVRRRSFSISP-VRLRRSRT 2022

Query: 163  SSMSAPSRACAACSSLDSRARVSSATGVSCSSSSDL 198
                 P R   + S +  +   SS  G S    +DL
Sbjct: 2023 -----PLRRRFSRSPIRRKRSRSSERGRSPKRLTDL 2053



 Score = 37.0 bits (84), Expect = 0.011
 Identities = 49/166 (29%), Positives = 70/166 (42%), Gaps = 17/166 (10%)

Query: 28   SSSLARTSATCSFTSSRRSRVRLPISSIRARSRSPQAWARSCSGWPAREPTVAARTRPCS 87
            S +  R+S + S  S  RSR R       +RSRS     RS S    +E    +      
Sbjct: 1845 SRARKRSSKSKSHRSQTRSRSRSRRRRRSSRSRSKSRGRRSVS----KEKRKRSPKHRSK 1900

Query: 88   TRGPRRSRMALRPRSAPSRAPAWYTARRFCRSSASRRSRLRSLRRWE------ARRTRSS 141
            +R  +R R + R      RA +   +RR    + SRR R RS+ R        +RR+R+ 
Sbjct: 1901 SRERKRKRSSSRDNRKTVRARSRTPSRRSRSHTPSRRRRSRSVGRRRSFSISPSRRSRT- 1959

Query: 142  SVLWPSMACTSPRYCTRRP--RTSSMSAPSRACAACSSLDSRARVS 185
                PS    +P   +R P  R+ + S  SR  +  S   SR R S
Sbjct: 1960 ----PSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRRRS 2001



 Score = 32.3 bits (72), Expect = 0.27
 Identities = 37/99 (37%), Positives = 44/99 (44%), Gaps = 8/99 (8%)

Query: 39   SFTSSRRSRVRLPISSIRARSRSPQAWARSCSGWPAREPTVAARTRPCSTRGPRRSRMAL 98
            SF+ S   R R P    R  SR  +  +R       R  T + R+R  S R  RRSR  +
Sbjct: 1948 SFSISPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRRSRTPSRR--RRSRSVV 2005

Query: 99   RPRS---APSRAPAWYT--ARRFCRSSASRRSRLRSLRR 132
            R RS   +P R     T   RRF RS   RR R RS  R
Sbjct: 2006 RRRSFSISPVRLRRSRTPLRRRFSRSPI-RRKRSRSSER 2043



 Score = 30.0 bits (66), Expect = 1.3
 Identities = 38/142 (26%), Positives = 53/142 (37%), Gaps = 21/142 (14%)

Query: 30   SLARTSATCSFTSSRRSRVRLPISSIRARSRSPQAWARSCSGWPAREPTVAARTRPCSTR 89
            S  R+ +  S +S  +SR R   S  RAR RS                     ++  S R
Sbjct: 1820 SSLRSRSKRSKSSEHKSRKRTSESRSRARKRS---------------------SKSKSHR 1858

Query: 90   GPRRSRMALRPRSAPSRAPAWYTARRFCRSSASRRSRLRSLRRWEARRTRSSSVLWPSMA 149
               RSR   R R   SR+ +    RR       +RS     +  E +R RSSS       
Sbjct: 1859 SQTRSRSRSRRRRRSSRSRSKSRGRRSVSKEKRKRSPKHRSKSRERKRKRSSSRDNRKTV 1918

Query: 150  CTSPRYCTRRPRTSSMSAPSRA 171
                R  +RR R+ + S   R+
Sbjct: 1919 RARSRTPSRRSRSHTPSRRRRS 1940


>gi|239755326 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 375

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 44/174 (25%), Positives = 74/174 (42%), Gaps = 10/174 (5%)

Query: 26  ACSSSLARTSATCSFTSSRRSRVRLPISSIRARS----RSPQAWARSCSGWPAREPTVAA 81
           +CS   +RTS+TCS  +SR S       S R  S    +S    + SC+   +R     +
Sbjct: 132 SCSCQSSRTSSTCSCQTSRTSSTSCSYQSSRTSSTCSCQSSGTSSTSCNWQSSR----TS 187

Query: 82  RTRPCSTRGPRRSRMALRPRSAPSRAPAWYTARRFCRSSASRRSRLRSLRRWEARRTRSS 141
            T  C + G   +  + +  S  S   +  ++     S + + S   S    ++  T S+
Sbjct: 188 STCSCQSSGTSSTSYSCQS-SGTSSTCSCQSSGTSSTSCSCQSSGTSSTCSCQSSGTSST 246

Query: 142 SVLWPSMACTSPRYCTRRPRTSSMSAPSRACAACSSLDSRARVSSATGVSCSSS 195
           S  W S   +S   C +   TSS S   ++    S+   ++  +S+T  SC SS
Sbjct: 247 SCSWQSSRTSSTCSC-QSSGTSSTSCSCQSSGTSSTCSCQSSGTSSTSCSCQSS 299



 Score = 38.9 bits (89), Expect = 0.003
 Identities = 43/170 (25%), Positives = 63/170 (37%), Gaps = 36/170 (21%)

Query: 26  ACSSSLARTSATCSFTSSRRSRVRLPISSIRARSRSPQAWARSCSGWPAREPTVAARTRP 85
           +CS   +RTS+TC   SSR S       S R  S S                        
Sbjct: 97  SCSWQFSRTSSTCCCQSSRTSSTSCSCQSSRTSSTS------------------------ 132

Query: 86  CSTRGPRRSRMALRPRSAPSRAPAWYTARRFCRSSASRRSRLRSLRRWEARRTRSSSVLW 145
           CS +  R S              +  T+R    S + + SR  S    ++  T S+S  W
Sbjct: 133 CSCQSSRTSSTC-----------SCQTSRTSSTSCSYQSSRTSSTCSCQSSGTSSTSCNW 181

Query: 146 PSMACTSPRYCTRRPRTSSMSAPSRACAACSSLDSRARVSSATGVSCSSS 195
            S   +S   C +   TSS S   ++    S+   ++  +S+T  SC SS
Sbjct: 182 QSSRTSSTCSC-QSSGTSSTSYSCQSSGTSSTCSCQSSGTSSTSCSCQSS 230



 Score = 36.6 bits (83), Expect = 0.014
 Identities = 54/199 (27%), Positives = 81/199 (40%), Gaps = 10/199 (5%)

Query: 2   SSTRGSNQLLRRAWKASA--CRRICWACSSSLARTSATCSFTSSRRSRVRLPISSIRARS 59
           SST  S Q  R +   S    R    +CS   +RTS+TCS  SS  S       S R  S
Sbjct: 129 SSTSCSCQSSRTSSTCSCQTSRTSSTSCSYQSSRTSSTCSCQSSGTSSTSCNWQSSRTSS 188

Query: 60  R-SPQAWARSCSGWPAREPTVAARTRPCSTRGPRRSRMALRPRSAPSRAPAWYTARRFCR 118
             S Q+   S + +  +    ++ T  C + G   +  + +  S  S   +  ++     
Sbjct: 189 TCSCQSSGTSSTSYSCQSSGTSS-TCSCQSSGTSSTSCSCQS-SGTSSTCSCQSSGTSST 246

Query: 119 SSASRRSRLRSLRRWEARRTRSSSVLWPSMACTSPRYC--TRRPRTSSMSAPSRACAACS 176
           S + + SR  S    ++  T S+S    S   +S   C  +    TS     SR  + CS
Sbjct: 247 SCSWQSSRTSSTCSCQSSGTSSTSCSCQSSGTSSTCSCQSSGTSSTSCSCQSSRTSSTCS 306

Query: 177 SLDSRARVSSATGVSCSSS 195
              SR   +S+T  SC SS
Sbjct: 307 CQFSR---TSSTSCSCQSS 322



 Score = 33.5 bits (75), Expect = 0.12
 Identities = 40/173 (23%), Positives = 67/173 (38%), Gaps = 26/173 (15%)

Query: 26  ACSSSLARTSATCSFTSSRRSRVRLPISSIRARSRSPQAWARSCSGWPAREPTVAARTRP 85
           +CS   ++TS+TCS  SS+        +S     +S    + SC+   +R     + T  
Sbjct: 17  SCSCQSSQTSSTCSCQSSQ--------TSSTCSCQSSGTSSTSCNWQSSR----TSSTCS 64

Query: 86  CSTRGPRRSRMALRPRSAPSRAPAWYTARRFCRSSASRRSRLRSLRRWEARRTRSSSVLW 145
           C + G   +  + +     S           C+SS +  +       W+  RT S+    
Sbjct: 65  CQSSGTSSTSCSCQSSETSSTCS--------CQSSGTSSTSC----SWQFSRTSSTCCCQ 112

Query: 146 PSMACTSPRYC--TRRPRTSSMSAPSRACAACSSLDSRARVSSATGVSCSSSS 196
            S   ++   C  +R   TS     SR  + CS   SR   +S +  S  +SS
Sbjct: 113 SSRTSSTSCSCQSSRTSSTSCSCQSSRTSSTCSCQTSRTSSTSCSYQSSRTSS 165



 Score = 27.7 bits (60), Expect = 6.7
 Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 4/51 (7%)

Query: 26  ACSSSLARTSATCSFTSSRRSRVRLPISSIRARS----RSPQAWARSCSGW 72
           +CS   +RTS+TCS   SR S       S R  S    +S    + SC  W
Sbjct: 293 SCSCQSSRTSSTCSCQFSRTSSTSCSCQSSRTSSTCSCQSSGTSSTSCICW 343


>gi|188219762 denticleless homolog [Homo sapiens]
          Length = 730

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 45/176 (25%), Positives = 66/176 (37%), Gaps = 26/176 (14%)

Query: 25  WACSSSLARTSATCSFTSSRRSRVRLPISSIRARSRSPQ--AWARSCSG---WPAREPTV 79
           WA            + TSS+ +  + P +     + SP   A A SC+G    P+  PT 
Sbjct: 408 WASQKKKESRPGLVTVTSSQSTPAKAPRAKCNPSNSSPSSAACAPSCAGDLPLPSNTPTF 467

Query: 80  AARTRPCSTRGPRRSRMALRPRSAPSRAPAWYTARRFCRSSASRRSRLRSLRRWEARRTR 139
           + +T P   R P   R ++   S   + P+               S   S+R W  R   
Sbjct: 468 SIKTSPAKARSPINRRGSV--SSVSPKPPS---------------SFKMSIRNWVTRTPS 510

Query: 140 SSSVLWPSMACTSPRYCTRRPRTSSMSAPSRACAACSSLDSRARVSSATGVSCSSS 195
           SS  + P  + T  +  + R     +S  S    ACS  +SR RV      SC  S
Sbjct: 511 SSPPITPPASET--KIMSPRKALIPVSQKSSQAEACS--ESRNRVKRRLDSSCLES 562


>gi|133922600 splicing factor, arginine/serine-rich 16 [Homo
           sapiens]
          Length = 674

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 49/155 (31%), Positives = 67/155 (43%), Gaps = 15/155 (9%)

Query: 32  ARTSATCSFTSSRRSRVRLPISSIRARSRSPQA--------WARSCSGWPAREPTVAART 83
           AR  ++ S +SS  SR     SS R+ SRS +          ARS S   +R  + + R 
Sbjct: 373 ARRRSSSSSSSSSASRTSSSRSSSRSSSRSRRGGGYYRSGRHARSRSRSWSRSRSRSRRY 432

Query: 84  RPCSTRGPRRSRMALRPRSAPSRAPA---WYTARRFCRSSASRRSRL----RSLRRWEAR 136
               +RG R S    R     SR+PA    Y  RR  RS +    R     R LR   + 
Sbjct: 433 SRSRSRGRRHSGGGSRDGHRYSRSPARRGGYGPRRRSRSRSHSGDRYRRGGRGLRHHSSS 492

Query: 137 RTRSSSVLWPSMACTSPRYCTRRPRTSSMSAPSRA 171
           R+RSS  L PS + +  R  +  P  S   + SR+
Sbjct: 493 RSRSSWSLSPSRSRSLTRSRSHSPSPSQSRSRSRS 527



 Score = 30.4 bits (67), Expect = 1.0
 Identities = 40/133 (30%), Positives = 51/133 (38%), Gaps = 14/133 (10%)

Query: 41  TSSRRSRVRLP-------ISSIRARSRSPQAWARSCSGWPAREPTVAARTRPCSTRGPRR 93
           +S  RSR R P       I+ I +   S +  A + +   A   T      P    GP  
Sbjct: 308 SSESRSRSRSPTPGREEKITFITSFGGSDEEAAAAAAAAAASGVTTGKPPAPPQPGGPAP 367

Query: 94  SRMA-LRPRSAPSRAPAWYTARRFCRSSASRRSRLRSLRRW----EARRTRSSSVLWPSM 148
            R A  R RS+ S + +  +A R   S +S RS  RS R        R  RS S  W   
Sbjct: 368 GRNASARRRSSSSSSSS--SASRTSSSRSSSRSSSRSRRGGGYYRSGRHARSRSRSWSRS 425

Query: 149 ACTSPRYCTRRPR 161
              S RY   R R
Sbjct: 426 RSRSRRYSRSRSR 438


>gi|42741684 zinc finger protein 265 isoform 1 [Homo sapiens]
          Length = 330

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 43/140 (30%), Positives = 59/140 (42%), Gaps = 21/140 (15%)

Query: 3   STRGSNQLLRRAWKASACRRICWACSSSLARTSATCSFTSSRRSRVRLPISSIRARSRSP 62
           S R S    R +   S+ R    + S S +R+ +  S +S  RSR     SS R RSRS 
Sbjct: 198 SNRRSRSKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSR-----SSSRERSRSR 252

Query: 63  QAWARSCSGWPAREPTVAARTRPCSTRGPRRSRMALRPRSAPSRAPAWYTARRFCRSSAS 122
            + +RS S       +   R+   S+  P R+R   R RS                SS+ 
Sbjct: 253 GSKSRSSSRSHRGSSSPRKRSYSSSSSSPERNRKRSRSRS----------------SSSG 296

Query: 123 RRSRLRSLRRWEARRTRSSS 142
            R + R+  R   RR RSSS
Sbjct: 297 DRKKRRTRSRSPERRHRSSS 316



 Score = 31.6 bits (70), Expect = 0.46
 Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 15/107 (14%)

Query: 81  ARTRPCSTRGPRRSRMALRPRSAPSRAPAWYTARRFCRSSASRRSRLRSLRRWEARRTRS 140
           +++R   +R   RS       S+PS + +   +R    SS+  RSR  S  R  +R ++S
Sbjct: 204 SKSRSSHSRSSSRS-------SSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKS 256

Query: 141 SSVLWPSMACTSPRYCTRRPRTSSMSAPSRACAACSSLDSRARVSSA 187
            S        +SPR   +R  +SS S+P R     +   SR+R SS+
Sbjct: 257 RSSSRSHRGSSSPR---KRSYSSSSSSPER-----NRKRSRSRSSSS 295


>gi|239744491 PREDICTED: hypothetical protein XP_002343164 [Homo
           sapiens]
          Length = 471

 Score = 38.5 bits (88), Expect = 0.004
 Identities = 53/187 (28%), Positives = 75/187 (40%), Gaps = 43/187 (22%)

Query: 1   MSSTRGSNQLLRRA-WKASA-------CRRICWACSSSLARTS---ATCSFTSSRRSRVR 49
           ++  R S+ LLR + W AS+        R  CW   SS +  S   A+ SF  S +  + 
Sbjct: 246 LAMLRSSSALLRSSPWPASSRSSSTRLSRSNCWNSKSSKSFVSVSRASASFNDSDKGVIE 305

Query: 50  LPISSIRARSRSPQAWARSCSGWPAREPTVAARTRPCSTRG--------PRRSRMALRPR 101
           L +     R         S   + + E ++ +  R  +T G        P R R  LRP 
Sbjct: 306 LRLELGVERLAGLPVLLHSSLRFSSSERSILSHRRWVATPGSSLLRPEAPARPREGLRPA 365

Query: 102 SA------------PSRAPA---WYTARRF------CRSSAS---RRSRLRSLRRWEARR 137
           SA            P+  P     Y+A RF       RSS S    RSR    RRW +RR
Sbjct: 366 SANAAVASPMLGSSPASGPPSARLYSAHRFRMVSRRWRSSLSISCSRSRSWRCRRWYSRR 425

Query: 138 TRSSSVL 144
           + S S++
Sbjct: 426 SSSLSLI 432


>gi|50083281 KIAA1853 protein [Homo sapiens]
          Length = 611

 Score = 38.1 bits (87), Expect = 0.005
 Identities = 50/147 (34%), Positives = 63/147 (42%), Gaps = 15/147 (10%)

Query: 42  SSRRSRVRLPISSIRARSRSPQAWAR--SCSGWPAREPTVAARTRPCSTRGPRRSRMALR 99
           S +R R R   +  R RS SP    R  S S   AR  T +AR RP     P  S     
Sbjct: 475 SQQRERER---ARRRRRSYSPMRKRRRDSPSHLEARRIT-SARKRPIPYYRPSPSSSG-- 528

Query: 100 PRSAPSRAPAWYTA---RRFCRSSASRRSRLRSLRRWEARRTRSSSVLWPSMACTSPRYC 156
              + S   +WY++   R   RS +  RSR RS RR   R + SSS   PS    S    
Sbjct: 529 ---SLSSTSSWYSSSSSRSASRSYSRSRSRSRSRRRSRTRTSSSSSSRSPSPGSRSRSRS 585

Query: 157 TRRPRTSSMSAPSRACAACSSLDSRAR 183
             R R+ S S  SR+ ++  S  S  R
Sbjct: 586 RSRSRSRSRS-QSRSYSSADSYSSTRR 611



 Score = 37.0 bits (84), Expect = 0.011
 Identities = 54/186 (29%), Positives = 70/186 (37%), Gaps = 18/186 (9%)

Query: 27  CSSSLARTSATCSFTSSRRSRVRLPISSIRARSRSPQAWARSCSGWPAREPTVAARTRPC 86
           CS S +  S   S  SSR    R   S    +SRS  +  RS S  P+       R+ P 
Sbjct: 389 CSRSSSYASTRSSSHSSRSPNPRA--SPRYTQSRSTSSEKRSYSRSPSYSSKSGKRSPPS 446

Query: 87  STRGPRRSRMALRPRSAPSRAPAW----------YTARRFCRSSASRRSRLR------SL 130
            +   RRS    R   +  R P +            ARR  RS +  R R R        
Sbjct: 447 RSSRSRRSPSYSRYSPSRERDPKYSEKDSQQRERERARRRRRSYSPMRKRRRDSPSHLEA 506

Query: 131 RRWEARRTRSSSVLWPSMACTSPRYCTRRPRTSSMSAPSRACAACSSLDSRARVSSATGV 190
           RR  + R R      PS + +     T    +SS S  +    + S   SR+R  S T  
Sbjct: 507 RRITSARKRPIPYYRPSPSSSGSLSSTSSWYSSSSSRSASRSYSRSRSRSRSRRRSRTRT 566

Query: 191 SCSSSS 196
           S SSSS
Sbjct: 567 SSSSSS 572



 Score = 32.3 bits (72), Expect = 0.27
 Identities = 55/195 (28%), Positives = 80/195 (41%), Gaps = 35/195 (17%)

Query: 33  RTSATCSFTSSRRSRVRLPISSIRARSRSPQAWARSCSGWPAREPTVAARTRPCSTRGPR 92
           R + + S +S +RS  R P  S ++  RSP     S S    R P+ + R  P   R P+
Sbjct: 415 RYTQSRSTSSEKRSYSRSPSYSSKSGKRSPP----SRSSRSRRSPSYS-RYSPSRERDPK 469

Query: 93  ----------RSRMALRPRS-APSR-----APAWYTARR----------FCRSSASRRSR 126
                     R R   R RS +P R     +P+   ARR          + R S S    
Sbjct: 470 YSEKDSQQRERERARRRRRSYSPMRKRRRDSPSHLEARRITSARKRPIPYYRPSPSSSGS 529

Query: 127 LRSLRRW-EARRTRSSSVLWP---SMACTSPRYCTRRPRTSSMSAPSRACAACSSLDSRA 182
           L S   W  +  +RS+S  +    S + +  R  TR   +SS  +PS    + S   SR+
Sbjct: 530 LSSTSSWYSSSSSRSASRSYSRSRSRSRSRRRSRTRTSSSSSSRSPSPGSRSRSRSRSRS 589

Query: 183 RVSSATGVSCSSSSD 197
           R  S +     SS+D
Sbjct: 590 RSRSRSQSRSYSSAD 604


>gi|239756987 PREDICTED: hypothetical protein XP_002345138 [Homo
           sapiens]
          Length = 459

 Score = 37.0 bits (84), Expect = 0.011
 Identities = 45/132 (34%), Positives = 56/132 (42%), Gaps = 14/132 (10%)

Query: 30  SLARTSATCSFTSSRRSRVRLPISSIRARSRSPQAWARSCSGWPAREPTVA-ARTRPCST 88
           S AR S    FTS+   R   P      R+R   A   S +  P R P+ A   +   +T
Sbjct: 121 SPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPADPGSTSSAT 180

Query: 89  RGP---RRSRMALRPR-------SAPSRAPAWYTARRFCRSSASRR-SRLRSLRRWEARR 137
           R P   R SR AL+PR        APSR+ +  T     R  ASRR    R L R   R 
Sbjct: 181 RVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPASRRPGAPRLLSRTRQRE 240

Query: 138 TRSSSVLWPSMA 149
              S+   PS+A
Sbjct: 241 LGGSAA--PSVA 250


>gi|239752939 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 310

 Score = 37.0 bits (84), Expect = 0.011
 Identities = 37/101 (36%), Positives = 51/101 (50%), Gaps = 9/101 (8%)

Query: 92  RRSRMALRPRSAPSRAPA-WYTARRFCRSSASRRSRLRSLRRWEARRTRSSSVLWPSMAC 150
           RR    LR + A + + + W  A    R+S++ RS   S R     R+R+S  L  S+A 
Sbjct: 178 RRGSTGLRAQGASAGSGSVWPRAASCLRASSASRSS--SARACSLSRSRASR-LPASVAR 234

Query: 151 TSPRYCTRRPRTSSMSAPSRACAACSSLDSRARVSSATGVS 191
           +SP   +RR R SS    S AC  CS+  S A  S ATG +
Sbjct: 235 SSP---SRRQRRSSSC--SSACCRCSNASSVACFSGATGAA 270



 Score = 30.8 bits (68), Expect = 0.79
 Identities = 36/114 (31%), Positives = 44/114 (38%), Gaps = 21/114 (18%)

Query: 16  KASACRRICWACSSSLARTSATCSFTSSRRSRVRLPISSIRARSRSPQAWARSCSGWPAR 75
           +A++C R   A  SS AR    CS + SR S  RLP S  R+     Q  + SCS    R
Sbjct: 199 RAASCLRASSASRSSSARA---CSLSRSRAS--RLPASVARSSPSRRQRRSSSCSSACCR 253

Query: 76  EPTV--------AARTRPCSTRGPRR--SRMALRPRSAPS------RAPAWYTA 113
                       A    P     P R  +R +   RS PS      R   W TA
Sbjct: 254 CSNASSVACFSGATGAAPALPASPSRELARHSFSRRSGPSGNRASIRVSCWATA 307


>gi|239747479 PREDICTED: hypothetical protein XP_002347544 [Homo
           sapiens]
          Length = 310

 Score = 37.0 bits (84), Expect = 0.011
 Identities = 37/101 (36%), Positives = 51/101 (50%), Gaps = 9/101 (8%)

Query: 92  RRSRMALRPRSAPSRAPA-WYTARRFCRSSASRRSRLRSLRRWEARRTRSSSVLWPSMAC 150
           RR    LR + A + + + W  A    R+S++ RS   S R     R+R+S  L  S+A 
Sbjct: 178 RRGSTGLRAQGASAGSGSVWPRAASCLRASSASRSS--SARACSLSRSRASR-LPASVAR 234

Query: 151 TSPRYCTRRPRTSSMSAPSRACAACSSLDSRARVSSATGVS 191
           +SP   +RR R SS    S AC  CS+  S A  S ATG +
Sbjct: 235 SSP---SRRQRRSSSC--SSACCRCSNASSVACFSGATGAA 270



 Score = 30.8 bits (68), Expect = 0.79
 Identities = 36/114 (31%), Positives = 44/114 (38%), Gaps = 21/114 (18%)

Query: 16  KASACRRICWACSSSLARTSATCSFTSSRRSRVRLPISSIRARSRSPQAWARSCSGWPAR 75
           +A++C R   A  SS AR    CS + SR S  RLP S  R+     Q  + SCS    R
Sbjct: 199 RAASCLRASSASRSSSARA---CSLSRSRAS--RLPASVARSSPSRRQRRSSSCSSACCR 253

Query: 76  EPTV--------AARTRPCSTRGPRR--SRMALRPRSAPS------RAPAWYTA 113
                       A    P     P R  +R +   RS PS      R   W TA
Sbjct: 254 CSNASSVACFSGATGAAPALPASPSRELARHSFSRRSGPSGNRASIRVSCWATA 307


>gi|239746003 PREDICTED: hypothetical protein XP_002344191 [Homo
           sapiens]
          Length = 459

 Score = 37.0 bits (84), Expect = 0.011
 Identities = 45/132 (34%), Positives = 56/132 (42%), Gaps = 14/132 (10%)

Query: 30  SLARTSATCSFTSSRRSRVRLPISSIRARSRSPQAWARSCSGWPAREPTVA-ARTRPCST 88
           S AR S    FTS+   R   P      R+R   A   S +  P R P+ A   +   +T
Sbjct: 121 SPARASPGGGFTSAEGKRKTRPAGRGGGRTRRVVAAPESAAAAPGRSPSPADPGSTSSAT 180

Query: 89  RGP---RRSRMALRPR-------SAPSRAPAWYTARRFCRSSASRR-SRLRSLRRWEARR 137
           R P   R SR AL+PR        APSR+ +  T     R  ASRR    R L R   R 
Sbjct: 181 RVPRARRSSRRALQPRHAAPDAPGAPSRSTSQATPPPAPRFPASRRPGAPRLLSRTRQRE 240

Query: 138 TRSSSVLWPSMA 149
              S+   PS+A
Sbjct: 241 LGGSAA--PSVA 250


>gi|239741351 PREDICTED: hypothetical protein XP_002342181 [Homo
           sapiens]
          Length = 310

 Score = 37.0 bits (84), Expect = 0.011
 Identities = 37/101 (36%), Positives = 51/101 (50%), Gaps = 9/101 (8%)

Query: 92  RRSRMALRPRSAPSRAPA-WYTARRFCRSSASRRSRLRSLRRWEARRTRSSSVLWPSMAC 150
           RR    LR + A + + + W  A    R+S++ RS   S R     R+R+S  L  S+A 
Sbjct: 178 RRGSTGLRAQGASAGSGSVWPRAASCLRASSASRSS--SARACSLSRSRASR-LPASVAR 234

Query: 151 TSPRYCTRRPRTSSMSAPSRACAACSSLDSRARVSSATGVS 191
           +SP   +RR R SS    S AC  CS+  S A  S ATG +
Sbjct: 235 SSP---SRRQRRSSSC--SSACCRCSNASSVACFSGATGAA 270



 Score = 30.8 bits (68), Expect = 0.79
 Identities = 36/114 (31%), Positives = 44/114 (38%), Gaps = 21/114 (18%)

Query: 16  KASACRRICWACSSSLARTSATCSFTSSRRSRVRLPISSIRARSRSPQAWARSCSGWPAR 75
           +A++C R   A  SS AR    CS + SR S  RLP S  R+     Q  + SCS    R
Sbjct: 199 RAASCLRASSASRSSSARA---CSLSRSRAS--RLPASVARSSPSRRQRRSSSCSSACCR 253

Query: 76  EPTV--------AARTRPCSTRGPRR--SRMALRPRSAPS------RAPAWYTA 113
                       A    P     P R  +R +   RS PS      R   W TA
Sbjct: 254 CSNASSVACFSGATGAAPALPASPSRELARHSFSRRSGPSGNRASIRVSCWATA 307


>gi|226509740 SR-related CTD-associated factor 1 [Homo sapiens]
          Length = 1312

 Score = 36.6 bits (83), Expect = 0.014
 Identities = 39/144 (27%), Positives = 60/144 (41%), Gaps = 15/144 (10%)

Query: 42  SSRRSRVRLPISSIRARSRSPQAWARSCSGWPAREPTVAARTRPCSTRGPRRSRMALRPR 101
           + RR R R      R+ S +P     + +G P R+ +   R R    +    S    +P 
Sbjct: 488 TQRRERYRQ-----RSPSPAPAPAPAAAAGPPTRKKSRRERKRSGEAKEAASSSSGTQP- 541

Query: 102 SAPSRAPAWYTARRFCR---------SSASRRSRLRSLRRWEARRTRSSSVLWPSMACTS 152
           + P+ A  W + +   R         SSA RRSR RS  R   RR+RS+         + 
Sbjct: 542 APPAPASPWDSKKHRSRDRKPGSHASSSARRRSRSRSRSRSTRRRSRSTDRRRGGSRRSR 601

Query: 153 PRYCTRRPRTSSMSAPSRACAACS 176
            R   RR R S+   P+ + ++ S
Sbjct: 602 SREKRRRRRRSASPPPATSSSSSS 625



 Score = 28.1 bits (61), Expect = 5.1
 Identities = 42/159 (26%), Positives = 61/159 (38%), Gaps = 32/159 (20%)

Query: 56  RARSRSPQAWARSCSGWPAREPTVAARTRPCSTRGPRRSRMALRPRSAPSRAPAWYTARR 115
           R+R R P + A S +   +R     +R+R  STR  RRSR   R R    R+ +    RR
Sbjct: 556 RSRDRKPGSHASSSARRRSR-----SRSRSRSTR--RRSRSTDRRRGGSRRSRSREKRRR 608

Query: 116 FCR----------SSASRRSRLRSLRR------WEARRTRSSSVLWPSMACTSPRYCTRR 159
             R          SS+SRR R R   R       + +R+RS             R     
Sbjct: 609 RRRSASPPPATSSSSSSRRERHRGKHRDGGGSKKKKKRSRSRG---------EKRSGDGS 659

Query: 160 PRTSSMSAPSRACAACSSLDSRARVSSATGVSCSSSSDL 198
            +  + + P     +C   DSR R +    +   +  DL
Sbjct: 660 EKAPAPAPPPSGSTSCGDRDSRRRGAVPPSIQDLTDHDL 698


>gi|23111062 splicing factor, arginine/serine-rich 8 [Homo sapiens]
          Length = 951

 Score = 36.6 bits (83), Expect = 0.014
 Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 11/135 (8%)

Query: 56  RARSRSPQAWARSCSGWPAREPTVAARTRPCSTRGPRRSRMALRPRSAPSRAP------- 108
           R RSRSP+  + S S   +R  + A  + P + R  RRSR   R     + +P       
Sbjct: 766 RTRSRSPKYHSSSKSR--SRSHSKAKHSLPSAYRTVRRSRSRSRSPRRRAHSPERRREER 823

Query: 109 AWYTARRFCRSSASRRSRLRSLRRWEARRTRSSSVLWPSMACTSPRYCTRR--PRTSSMS 166
           +  TA R  RS  + R R RS    E ++ R S     S A +     +++  PR ++ +
Sbjct: 824 SVPTAYRVSRSPGASRKRTRSRSPHEKKKKRRSRSRTKSKARSQSVSPSKQAAPRPAAPA 883

Query: 167 APSRACAACSSLDSR 181
           A S   A+ S ++SR
Sbjct: 884 AHSAHSASVSPVESR 898


>gi|42741682 zinc finger protein 265 isoform 2 [Homo sapiens]
          Length = 320

 Score = 36.2 bits (82), Expect = 0.019
 Identities = 33/103 (32%), Positives = 47/103 (45%), Gaps = 5/103 (4%)

Query: 3   STRGSNQLLRRAWKASACRRICWACSSSLARTSATCSFTSSRRSRVRLPISSIRARSRSP 62
           S R S    R +   S+ R    + S S +R+ +  S +S  RSR     SS R RSRS 
Sbjct: 198 SNRRSRSKSRSSHSRSSSRSSSPSSSRSRSRSRSRSSSSSQSRSR-----SSSRERSRSR 252

Query: 63  QAWARSCSGWPAREPTVAARTRPCSTRGPRRSRMALRPRSAPS 105
            + +RS S       +   R+   S+  P R+R   R RS+ S
Sbjct: 253 GSKSRSSSRSHRGSSSPRKRSYSSSSSSPERNRKRSRSRSSSS 295



 Score = 31.6 bits (70), Expect = 0.46
 Identities = 32/107 (29%), Positives = 51/107 (47%), Gaps = 15/107 (14%)

Query: 81  ARTRPCSTRGPRRSRMALRPRSAPSRAPAWYTARRFCRSSASRRSRLRSLRRWEARRTRS 140
           +++R   +R   RS       S+PS + +   +R    SS+  RSR  S  R  +R ++S
Sbjct: 204 SKSRSSHSRSSSRS-------SSPSSSRSRSRSRSRSSSSSQSRSRSSSRERSRSRGSKS 256

Query: 141 SSVLWPSMACTSPRYCTRRPRTSSMSAPSRACAACSSLDSRARVSSA 187
            S        +SPR   +R  +SS S+P R     +   SR+R SS+
Sbjct: 257 RSSSRSHRGSSSPR---KRSYSSSSSSPER-----NRKRSRSRSSSS 295



 Score = 30.0 bits (66), Expect = 1.3
 Identities = 45/134 (33%), Positives = 63/134 (47%), Gaps = 28/134 (20%)

Query: 16  KASACRRICWACSSSLARTSATCSFTSSRRSRVRLPISSIRARSRSPQAWARSCSGWPAR 75
           K  + RR      SS +R+S+  S  SS RSR R       +RSRS  + ++S S   +R
Sbjct: 195 KKKSNRRSRSKSRSSHSRSSSRSSSPSSSRSRSR-------SRSRSSSS-SQSRSRSSSR 246

Query: 76  EPTVAARTRPCSTRGPRRSRMALRPRSAPSRAPAWYTARRFCRSSAS-----RRSRLRSL 130
           E    +R+R   +R   RS    R  S+P +       R +  SS+S     +RSR RS 
Sbjct: 247 E---RSRSRGSKSRSSSRSH---RGSSSPRK-------RSYSSSSSSPERNRKRSRSRSS 293

Query: 131 RRWE--ARRTRSSS 142
              +   RRTRS S
Sbjct: 294 SSGDRKKRRTRSRS 307


>gi|85838513 pantothenate kinase 2 isoform 1 preproprotein [Homo
           sapiens]
          Length = 570

 Score = 35.8 bits (81), Expect = 0.024
 Identities = 47/151 (31%), Positives = 58/151 (38%), Gaps = 18/151 (11%)

Query: 39  SFTSSRRSRVRLPISSIRARSRSPQAWARSCSGWPAREPTVAARTRPCSTRGPRRSRMAL 98
           +F  S  S   LP      R   P+A  R CSGW A E    AR  P       R R+ L
Sbjct: 68  AFGPSPASSDWLPARWRNGRGGRPRA--RLCSGWTAAE---EARRNPTLGGLLGRQRLLL 122

Query: 99  RPRSAPSRAPAWYTARRFCRSSASRRSRLR---SLRRWEARRTRSSSVLWPSMACTSPRY 155
           R       AP     R    S +S   +       RR E  R R+SS   P++  ++   
Sbjct: 123 RMGGGRLGAPMERHGRASATSVSSAGEQAAGDPEGRRQEPLRRRASSASVPAVGASAEG- 181

Query: 156 CTRRPRTSSMSAPSRACAACSSLDSRARVSS 186
            TRR R  S S P+          SR RV S
Sbjct: 182 -TRRDRLGSYSGPTSV--------SRQRVES 203


>gi|50409691 SRp25 nuclear protein isoform 4 [Homo sapiens]
          Length = 338

 Score = 35.8 bits (81), Expect = 0.024
 Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 22/150 (14%)

Query: 59  SRSPQAWARSCSGWPAREPTVAARTRPCSTRGPRR--SRMALRPRSAPSRAP-------- 108
           +R P     S  G  AR+ T   RT+      P R  SR A RP ++    P        
Sbjct: 53  ARGPAPLLASAGGGRARDGTWGVRTKGSGAALPSRPASRAAPRPEASSPPLPLEKARGGL 112

Query: 109 ------------AWYTARRFCRSSASRRSRLRSLRRWEARRTRSSSVLWPSMACTSPRYC 156
                       A   +R+  RS +  R R    R+ ++R+  S +    +    S +  
Sbjct: 113 SGPQGGRARGAMAHVGSRKRSRSRSRSRGRGSEKRKKKSRKDTSRNCSASTSQERSKQKA 172

Query: 157 TRRPRTSSMSAPSRACAACSSLDSRARVSS 186
            RR R+SS S+ S + ++ SS  S +  SS
Sbjct: 173 RRRTRSSSSSSSSSSSSSSSSSSSSSSSSS 202


>gi|50409707 SRp25 nuclear protein isoform 2 [Homo sapiens]
          Length = 341

 Score = 35.8 bits (81), Expect = 0.024
 Identities = 39/150 (26%), Positives = 60/150 (40%), Gaps = 22/150 (14%)

Query: 59  SRSPQAWARSCSGWPAREPTVAARTRPCSTRGPRR--SRMALRPRSAPSRAP-------- 108
           +R P     S  G  AR+ T   RT+      P R  SR A RP ++    P        
Sbjct: 53  ARGPAPLLASAGGGRARDGTWGVRTKGSGAALPSRPASRAAPRPEASSPPLPLEKARGGL 112

Query: 109 ------------AWYTARRFCRSSASRRSRLRSLRRWEARRTRSSSVLWPSMACTSPRYC 156
                       A   +R+  RS +  R R    R+ ++R+  S +    +    S +  
Sbjct: 113 SGPQGGRARGAMAHVGSRKRSRSRSRSRGRGSEKRKKKSRKDTSRNCSASTSQERSKQKA 172

Query: 157 TRRPRTSSMSAPSRACAACSSLDSRARVSS 186
            RR R+SS S+ S + ++ SS  S +  SS
Sbjct: 173 RRRTRSSSSSSSSSSSSSSSSSSSSSSSSS 202


>gi|4759098 splicing factor, arginine/serine-rich 10 [Homo sapiens]
          Length = 288

 Score = 35.4 bits (80), Expect = 0.032
 Identities = 31/87 (35%), Positives = 40/87 (45%), Gaps = 4/87 (4%)

Query: 56  RARSRSPQAWARSCSGWPAREPTVAARTRPCSTRGPRRSRMALRPRSAPSRAPAWYTARR 115
           R+ SRS  A     SG  AR     +R++  S R   +SR     RS   R+   +  R 
Sbjct: 15  RSASRSGSAHG---SGKSARHTPARSRSKEDSRRSRSKSRSRSESRSRSRRSSRRHYTRS 71

Query: 116 FCRSSASRRSRLRSLRRWEARRTRSSS 142
             RS + RRSR RS  R + RR  S S
Sbjct: 72  RSRSRSHRRSRSRSYSR-DYRRRHSHS 97


>gi|126723149 chromosome 19 open reading frame 29 [Homo sapiens]
          Length = 758

 Score = 35.4 bits (80), Expect = 0.032
 Identities = 45/156 (28%), Positives = 66/156 (42%), Gaps = 12/156 (7%)

Query: 31  LARTSATCSFTSSRRSRVRLPISSIRARSRS-PQAWARSCSGWPAREPTVAARTRPCSTR 89
           + R + + S ++ RR R R   S  R+RSRS  +   R       R     +R R   + 
Sbjct: 1   MGRDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSE 60

Query: 90  GPRRSRMALRPRSAPSRAPAWYTARRFCRSSASRRSRLRSLRRWEARRTRSSSVLW-PSM 148
             R  R  +R RS P   P W++      SS S     +S  +W  RR R+ S  W PS 
Sbjct: 61  EERWQRSGMRSRSPP--RPKWHSRD---GSSQSDSGEEQSRGQWARRRRRARS--WSPSS 113

Query: 149 ACTSPRYCTRRPRTSSMSAPSRACAACSSLDSRARV 184
           + +S        R+ S  A + A +   SL  R R+
Sbjct: 114 SASS---SASPGRSQSPRAAAAALSQQQSLQERLRL 146


>gi|122937392 chromosome 19 open reading frame 29 [Homo sapiens]
          Length = 758

 Score = 35.4 bits (80), Expect = 0.032
 Identities = 45/156 (28%), Positives = 66/156 (42%), Gaps = 12/156 (7%)

Query: 31  LARTSATCSFTSSRRSRVRLPISSIRARSRS-PQAWARSCSGWPAREPTVAARTRPCSTR 89
           + R + + S ++ RR R R   S  R+RSRS  +   R       R     +R R   + 
Sbjct: 1   MGRDTRSRSRSAGRRGRRRQSQSGSRSRSRSHGRRNRRRREDEGRRRRRRRSRERRSDSE 60

Query: 90  GPRRSRMALRPRSAPSRAPAWYTARRFCRSSASRRSRLRSLRRWEARRTRSSSVLW-PSM 148
             R  R  +R RS P   P W++      SS S     +S  +W  RR R+ S  W PS 
Sbjct: 61  EERWQRSGMRSRSPP--RPKWHSRD---GSSQSDSGEEQSRGQWARRRRRARS--WSPSS 113

Query: 149 ACTSPRYCTRRPRTSSMSAPSRACAACSSLDSRARV 184
           + +S        R+ S  A + A +   SL  R R+
Sbjct: 114 SASS---SASPGRSQSPRAAAAALSQQQSLQERLRL 146


>gi|119226260 calcium homeostasis endoplasmic reticulum protein
           [Homo sapiens]
          Length = 916

 Score = 35.4 bits (80), Expect = 0.032
 Identities = 42/117 (35%), Positives = 53/117 (45%), Gaps = 24/117 (20%)

Query: 33  RTSATCSFTSSRRSRVRLPISSIRARSRSPQAWARSCSGWPAREPTVAARTRPCSTRGPR 92
           R S      S  +SR R   SS R+ SRS ++     SG  +R     +R+R CS R   
Sbjct: 732 RNSGPSRSRSRSKSRGR---SSSRSNSRSSKS-----SGSYSR-----SRSRSCS-RSYS 777

Query: 93  RSRMALRPRSAPSRAPAWYTARRFCRSSASRRSRLRSLRRWEARRTRSSSVLWPSMA 149
           RSR   R RS  SR+          RS +  RSR +S      RR+RS S   PS A
Sbjct: 778 RSRSRSRSRSRSSRS----------RSRSQSRSRSKSYSPGRRRRSRSRSPTPPSSA 824



 Score = 27.3 bits (59), Expect = 8.7
 Identities = 33/79 (41%), Positives = 41/79 (51%), Gaps = 9/79 (11%)

Query: 28  SSSLART-SATCSFTSSR-RSRVRLPISSIRARSRSPQAWARSCSGWPAREPTVAARTRP 85
           S S +R+ S +CS + SR RSR R    S R+RSRS Q+ +RS S  P R      R+R 
Sbjct: 761 SGSYSRSRSRSCSRSYSRSRSRSRSRSRSSRSRSRS-QSRSRSKSYSPGRR----RRSRS 815

Query: 86  CSTRGPRRSRMALRPRSAP 104
            S   P  S   L   SAP
Sbjct: 816 RSPTPP--SSAGLGSNSAP 832


>gi|42542379 serine/arginine repetitive matrix 1 [Homo sapiens]
          Length = 904

 Score = 35.4 bits (80), Expect = 0.032
 Identities = 50/160 (31%), Positives = 63/160 (39%), Gaps = 18/160 (11%)

Query: 45  RSRVRLPISSIRARSRSPQAW-------ARSCSGWPAREPTVAARTRPCSTRGPRRSRMA 97
           RSR R    S R RSRSP          +RS S  P R P+   R  P     PRR  M 
Sbjct: 277 RSRSRSKSRS-RTRSRSPSHTRPRRRHRSRSRSYSPRRRPSPRRRPSPRRRTPPRR--MP 333

Query: 98  LRPRSAPSRAPAWYTARRFC----RSSASRRSRLRSLRRWEARRT----RSSSVLWPSMA 149
             PR   SR+P     R        SS+S  SR RS  +   +RT    R +  L PS +
Sbjct: 334 PPPRHRRSRSPVRRRRRSSASLSGSSSSSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSAS 393

Query: 150 CTSPRYCTRRPRTSSMSAPSRACAACSSLDSRARVSSATG 189
               R+    P T             S+   ++RVS + G
Sbjct: 394 PPRRRHRPSPPATPPPKTRHSPTPQQSNRTRKSRVSVSPG 433


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.321    0.120    0.388 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,447,837
Number of Sequences: 37866
Number of extensions: 316065
Number of successful extensions: 2788
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 199
Number of HSP's that attempted gapping in prelim test: 2303
Number of HSP's gapped (non-prelim): 469
length of query: 198
length of database: 18,247,518
effective HSP length: 97
effective length of query: 101
effective length of database: 14,574,516
effective search space: 1472026116
effective search space used: 1472026116
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.