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Search of human proteins with 169213385
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169213385 PREDICTED: hypothetical protein LOC147710 [Homo
sapiens]
(192 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169213963 PREDICTED: hypothetical protein LOC147710 [Homo sap... 389 e-108
gi|169214369 PREDICTED: hypothetical protein LOC147710 [Homo sap... 389 e-108
gi|169213385 PREDICTED: hypothetical protein LOC147710 [Homo sap... 389 e-108
gi|10835203 advanced glycosylation end product-specific receptor... 47 8e-06
gi|85861202 carcinoembryonic antigen-related cell adhesion molec... 43 1e-04
gi|17511435 roundabout homolog 4, magic roundabout [Homo sapiens] 42 4e-04
gi|61742797 basal cell adhesion molecule isoform 2 precursor [Ho... 40 0.002
gi|31543106 basal cell adhesion molecule isoform 1 precursor [Ho... 40 0.002
gi|157785645 SPEG complex locus [Homo sapiens] 40 0.002
gi|110349721 titin isoform novex-3 [Homo sapiens] 39 0.003
gi|145275198 ADAMTS-like 3 precursor [Homo sapiens] 39 0.003
gi|156564378 carcinoembryonic antigen-related cell adhesion mole... 39 0.004
gi|156564393 carcinoembryonic antigen-related cell adhesion mole... 39 0.004
gi|98986445 carcinoembryonic antigen-related cell adhesion molec... 38 0.005
gi|118572606 hemicentin 1 [Homo sapiens] 38 0.006
gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens] 37 0.010
gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens] 37 0.010
gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens] 37 0.010
gi|15826840 PTK7 protein tyrosine kinase 7 isoform a precursor [... 37 0.010
gi|22902128 PTK7 protein tyrosine kinase 7 isoform c precursor [... 37 0.010
gi|22902126 PTK7 protein tyrosine kinase 7 isoform b precursor [... 37 0.010
gi|149773484 leucine rich repeat and fibronectin type III domain... 35 0.030
gi|40255157 leucine-rich repeats and immunoglobulin-like domains... 35 0.039
gi|209862903 leucine-rich repeats and immunoglobulin-like domain... 35 0.039
gi|51988914 fibroblast growth factor receptor-like 1 precursor [... 34 0.067
gi|51988910 fibroblast growth factor receptor-like 1 precursor [... 34 0.067
gi|51988912 fibroblast growth factor receptor-like 1 precursor [... 34 0.067
gi|54792136 follistatin-like 4 [Homo sapiens] 34 0.067
gi|134152686 receptor tyrosine kinase-like orphan receptor 1 iso... 34 0.087
gi|134152725 receptor tyrosine kinase-like orphan receptor 1 iso... 34 0.087
>gi|169213963 PREDICTED: hypothetical protein LOC147710 [Homo
sapiens]
Length = 192
Score = 389 bits (998), Expect = e-108
Identities = 192/192 (100%), Positives = 192/192 (100%)
Query: 1 MRAKPQSPLPRNPVPAWSPPTTTTDPMLEKDAAGGDFPANLVLQLMPLKTFPAAIRGVIQ 60
MRAKPQSPLPRNPVPAWSPPTTTTDPMLEKDAAGGDFPANLVLQLMPLKTFPAAIRGVIQ
Sbjct: 1 MRAKPQSPLPRNPVPAWSPPTTTTDPMLEKDAAGGDFPANLVLQLMPLKTFPAAIRGVIQ 60
Query: 61 SELNYSVILQWVVTMDPEPVLSWTFSGVPCGMGEKLFIRRLSCEQLGTYMCIATNSKKQL 120
SELNYSVILQWVVTMDPEPVLSWTFSGVPCGMGEKLFIRRLSCEQLGTYMCIATNSKKQL
Sbjct: 61 SELNYSVILQWVVTMDPEPVLSWTFSGVPCGMGEKLFIRRLSCEQLGTYMCIATNSKKQL 120
Query: 121 VSEPVTISLPKPIMQPTEAEPMEPDPTLSLSGGSAIGLLAAGILGAGALIAGMCFIIIQS 180
VSEPVTISLPKPIMQPTEAEPMEPDPTLSLSGGSAIGLLAAGILGAGALIAGMCFIIIQS
Sbjct: 121 VSEPVTISLPKPIMQPTEAEPMEPDPTLSLSGGSAIGLLAAGILGAGALIAGMCFIIIQS 180
Query: 181 LRTDRQRIGICS 192
LRTDRQRIGICS
Sbjct: 181 LRTDRQRIGICS 192
>gi|169214369 PREDICTED: hypothetical protein LOC147710 [Homo
sapiens]
Length = 192
Score = 389 bits (998), Expect = e-108
Identities = 192/192 (100%), Positives = 192/192 (100%)
Query: 1 MRAKPQSPLPRNPVPAWSPPTTTTDPMLEKDAAGGDFPANLVLQLMPLKTFPAAIRGVIQ 60
MRAKPQSPLPRNPVPAWSPPTTTTDPMLEKDAAGGDFPANLVLQLMPLKTFPAAIRGVIQ
Sbjct: 1 MRAKPQSPLPRNPVPAWSPPTTTTDPMLEKDAAGGDFPANLVLQLMPLKTFPAAIRGVIQ 60
Query: 61 SELNYSVILQWVVTMDPEPVLSWTFSGVPCGMGEKLFIRRLSCEQLGTYMCIATNSKKQL 120
SELNYSVILQWVVTMDPEPVLSWTFSGVPCGMGEKLFIRRLSCEQLGTYMCIATNSKKQL
Sbjct: 61 SELNYSVILQWVVTMDPEPVLSWTFSGVPCGMGEKLFIRRLSCEQLGTYMCIATNSKKQL 120
Query: 121 VSEPVTISLPKPIMQPTEAEPMEPDPTLSLSGGSAIGLLAAGILGAGALIAGMCFIIIQS 180
VSEPVTISLPKPIMQPTEAEPMEPDPTLSLSGGSAIGLLAAGILGAGALIAGMCFIIIQS
Sbjct: 121 VSEPVTISLPKPIMQPTEAEPMEPDPTLSLSGGSAIGLLAAGILGAGALIAGMCFIIIQS 180
Query: 181 LRTDRQRIGICS 192
LRTDRQRIGICS
Sbjct: 181 LRTDRQRIGICS 192
>gi|169213385 PREDICTED: hypothetical protein LOC147710 [Homo
sapiens]
Length = 192
Score = 389 bits (998), Expect = e-108
Identities = 192/192 (100%), Positives = 192/192 (100%)
Query: 1 MRAKPQSPLPRNPVPAWSPPTTTTDPMLEKDAAGGDFPANLVLQLMPLKTFPAAIRGVIQ 60
MRAKPQSPLPRNPVPAWSPPTTTTDPMLEKDAAGGDFPANLVLQLMPLKTFPAAIRGVIQ
Sbjct: 1 MRAKPQSPLPRNPVPAWSPPTTTTDPMLEKDAAGGDFPANLVLQLMPLKTFPAAIRGVIQ 60
Query: 61 SELNYSVILQWVVTMDPEPVLSWTFSGVPCGMGEKLFIRRLSCEQLGTYMCIATNSKKQL 120
SELNYSVILQWVVTMDPEPVLSWTFSGVPCGMGEKLFIRRLSCEQLGTYMCIATNSKKQL
Sbjct: 61 SELNYSVILQWVVTMDPEPVLSWTFSGVPCGMGEKLFIRRLSCEQLGTYMCIATNSKKQL 120
Query: 121 VSEPVTISLPKPIMQPTEAEPMEPDPTLSLSGGSAIGLLAAGILGAGALIAGMCFIIIQS 180
VSEPVTISLPKPIMQPTEAEPMEPDPTLSLSGGSAIGLLAAGILGAGALIAGMCFIIIQS
Sbjct: 121 VSEPVTISLPKPIMQPTEAEPMEPDPTLSLSGGSAIGLLAAGILGAGALIAGMCFIIIQS 180
Query: 181 LRTDRQRIGICS 192
LRTDRQRIGICS
Sbjct: 181 LRTDRQRIGICS 192
>gi|10835203 advanced glycosylation end product-specific receptor
isoform 1 precursor [Homo sapiens]
Length = 404
Score = 47.4 bits (111), Expect = 8e-06
Identities = 38/116 (32%), Positives = 51/116 (43%), Gaps = 17/116 (14%)
Query: 66 SVILQWVVTMDPEPVLSWTFSGVPCGMGEK--LFIRRLSCEQLGTYMCIATNSKK-QLVS 122
+V L V P P + W GVP + L + + + GTY C+AT+S S
Sbjct: 254 TVTLTCEVPAQPSPQIHWMKDGVPLPLPPSPVLILPEIGPQDQGTYSCVATHSSHGPQES 313
Query: 123 EPVTISLPKPIMQPTEAEPMEPDPTLSLSGGSAIGLLA-----AGILGAGALIAGM 173
V+IS+ EP E PT GGS +G LA G LG AL+ G+
Sbjct: 314 RAVSISI---------IEPGEEGPTAGSVGGSGLGTLALALGILGGLGTAALLIGV 360
>gi|85861202 carcinoembryonic antigen-related cell adhesion molecule
16 [Homo sapiens]
Length = 484
Score = 43.1 bits (100), Expect = 1e-04
Identities = 35/101 (34%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 59 IQSELNYSVILQWVVTMDPEPVLSWTFSGVPCGMGEK-LFIRRLSCEQLGTYMCIATNSK 117
I+ + N S+ L V PEP WTF+G G+ L I ++ Q GTY CIA N+K
Sbjct: 299 IKVDFNTSLTLWCVSRSCPEPEYVWTFNGQALKNGQDHLNISSMTAAQEGTYTCIAKNTK 358
Query: 118 KQLV-SEPVTISLP----KPIMQPTEAEPME-PDPTLSLSG 152
L S V + L ++ P +P E D TL++ G
Sbjct: 359 TLLSGSASVVVKLSAAAVATMIVPVPTKPTEGQDVTLTVQG 399
>gi|17511435 roundabout homolog 4, magic roundabout [Homo sapiens]
Length = 1007
Score = 41.6 bits (96), Expect = 4e-04
Identities = 29/103 (28%), Positives = 40/103 (38%), Gaps = 28/103 (27%)
Query: 77 PEPVLSWTFSGVPCGM--------GEKLFIRRLSCEQLGTYMCIATNSKKQLVSEPVTIS 128
PEP +SW G P + G L + R GTYMC+ATNS S +S
Sbjct: 165 PEPTVSWWKDGKPLALQPGRHTVSGGSLLMARAEKSDEGTYMCVATNSAGHRESRAARVS 224
Query: 129 LPKP--------------------IMQPTEAEPMEPDPTLSLS 151
+ +P ++ P AE +P P + LS
Sbjct: 225 IQEPQDYTEPVELLAVRIQLENVTLLNPDPAEGPKPRPAVWLS 267
>gi|61742797 basal cell adhesion molecule isoform 2 precursor [Homo
sapiens]
Length = 588
Score = 39.7 bits (91), Expect = 0.002
Identities = 34/121 (28%), Positives = 48/121 (39%), Gaps = 24/121 (19%)
Query: 58 VIQSELNYSVILQWVVTMDPEPVLSWTFSGVPCGMGEKLFIRRLSCEQLGTYMCIATNSK 117
V+ LN S ++ V P P L WT P G G L + ++ + GTY+C A+
Sbjct: 371 VLSLPLNSSAVVNCSVHGLPTPALRWTKDSTPLGDGPMLSLSSITFDSNGTYVCEASLPT 430
Query: 118 KQLVSEPVTISL---PKPIMQPTEAEPM-------------------EPDPTLSLS--GG 153
++S +L P ++ E EP PDP LS S GG
Sbjct: 431 VPVLSRTQNFTLLVQGSPELKTAEIEPKADGSWREGDEVTLICSARGHPDPKLSWSQLGG 490
Query: 154 S 154
S
Sbjct: 491 S 491
>gi|31543106 basal cell adhesion molecule isoform 1 precursor [Homo
sapiens]
Length = 628
Score = 39.7 bits (91), Expect = 0.002
Identities = 34/121 (28%), Positives = 48/121 (39%), Gaps = 24/121 (19%)
Query: 58 VIQSELNYSVILQWVVTMDPEPVLSWTFSGVPCGMGEKLFIRRLSCEQLGTYMCIATNSK 117
V+ LN S ++ V P P L WT P G G L + ++ + GTY+C A+
Sbjct: 371 VLSLPLNSSAVVNCSVHGLPTPALRWTKDSTPLGDGPMLSLSSITFDSNGTYVCEASLPT 430
Query: 118 KQLVSEPVTISL---PKPIMQPTEAEPM-------------------EPDPTLSLS--GG 153
++S +L P ++ E EP PDP LS S GG
Sbjct: 431 VPVLSRTQNFTLLVQGSPELKTAEIEPKADGSWREGDEVTLICSARGHPDPKLSWSQLGG 490
Query: 154 S 154
S
Sbjct: 491 S 491
>gi|157785645 SPEG complex locus [Homo sapiens]
Length = 3267
Score = 39.7 bits (91), Expect = 0.002
Identities = 38/135 (28%), Positives = 56/135 (41%), Gaps = 20/135 (14%)
Query: 18 SPPTTTTDPMLEKDAAGGDFP---ANLVLQLMPLKTFPAAIRGVIQSELNYSVILQWVVT 74
+PP+ P K AGG P A + L PLK AA+ V L+ VV+
Sbjct: 16 APPSPGVPPKRAKVGAGGGAPVAVAGAPVFLRPLKN--AAVCA------GSDVRLRVVVS 67
Query: 75 MDPEPVLSWTFSG----VPCGMGEKLFIRRLSCEQLGTYMCIATNSKKQLVSEPVTISLP 130
P+P L W G P L++RR + G Y C+A N + + E V
Sbjct: 68 GTPQPSLRWFRDGQLLPAPAPEPSCLWLRRCGAQDAGVYSCMAQNERGRASCEAVL---- 123
Query: 131 KPIMQPTEAEPMEPD 145
+++ ++E E D
Sbjct: 124 -TVLEVGDSETAEDD 137
Score = 31.2 bits (69), Expect = 0.57
Identities = 29/117 (24%), Positives = 43/117 (36%), Gaps = 36/117 (30%)
Query: 67 VILQWVVTMDPEPVLSWTFSGVPC-----------GMGEKLFIRRLSCEQLGTYMCIATN 115
V+L+ ++T +P P +SW G G L +R G+YM ATN
Sbjct: 739 VLLKCIITANPPPQVSWHKDGSALRSEGRLLLRAEGERHTLLLREARAADAGSYMATATN 798
Query: 116 SKKQLV----------------SEPVT-----ISLPKPIMQPTEAEP----MEPDPT 147
Q S P+T +S P+ +P E P M+P P+
Sbjct: 799 ELGQATCAASLTVRPGGSTSPFSSPITSDEEYLSPPEEFPEPGETWPRTPTMKPSPS 855
Score = 28.1 bits (61), Expect = 4.8
Identities = 25/88 (28%), Positives = 35/88 (39%), Gaps = 19/88 (21%)
Query: 77 PEPVLSWTFSGVPCGMGEKLFIRR-----------LSCEQLGTYMCIATNSKKQ------ 119
P PV++WT G P E L +R+ + E G Y A N+ Q
Sbjct: 1091 PPPVVTWTHFGCPMEESENLRLRQDGGLHSLHIAHVGSEDEGLYAVSAVNTHGQAHCSAQ 1150
Query: 120 -LVSEPVT-ISLPKPIMQPTEAEPMEPD 145
V EP T S P ++ + P EP+
Sbjct: 1151 LYVEEPRTAASGPSSKLEKMPSIPEEPE 1178
>gi|110349721 titin isoform novex-3 [Homo sapiens]
Length = 5604
Score = 38.9 bits (89), Expect = 0.003
Identities = 23/78 (29%), Positives = 40/78 (51%), Gaps = 17/78 (21%)
Query: 66 SVILQWVVTMDPEPVLSWTFSGVPCGMGEK-----------LFIRRLSCEQLGTYMCIAT 114
S+IL+ +++ +P+PV++W +GV +K L+I+ ++ + G Y C+A
Sbjct: 4175 SIILECLISGEPQPVVTWFQNGVLLKQNQKFQFEEVNCSHQLYIKDVNSQDSGKYKCVAE 4234
Query: 115 N------SKKQLVSEPVT 126
N S L EPVT
Sbjct: 4235 NNSGAVESVSDLTVEPVT 4252
>gi|145275198 ADAMTS-like 3 precursor [Homo sapiens]
Length = 1691
Score = 38.9 bits (89), Expect = 0.003
Identities = 30/114 (26%), Positives = 49/114 (42%), Gaps = 21/114 (18%)
Query: 55 IRGVIQSELNYSVILQWVVTMDPEPVLSWTFSG------VPCGMGEKLFIRRLSCEQLGT 108
+ G++++ L +V ++ V P+P ++W G V L ++ +S E GT
Sbjct: 1305 VGGIVEAALGANVTIRCPVKGVPQPNITWLKRGGSLSGNVSLLFNGSLLLQNVSLENEGT 1364
Query: 109 YMCIATNSKKQLVSEPVTISL---------------PKPIMQPTEAEPMEPDPT 147
Y+CIATN+ + V+ V L K I+Q T DPT
Sbjct: 1365 YVCIATNALGKAVATSVLHLLERRWPESRIVFLQGHKKYILQATNTRTNSNDPT 1418
Score = 30.4 bits (67), Expect = 0.97
Identities = 24/103 (23%), Positives = 48/103 (46%), Gaps = 9/103 (8%)
Query: 64 NYSVILQWVVTMDPEPVLSWTFSGVPCGMGEKLFIRR--------LSCEQLGTYMCIATN 115
N SVI++ V + ++ W G ++L I + L+ +G Y CIA +
Sbjct: 927 NTSVIIKCPVRRFQKSLIQWEKDGRCLQNSKRLGITKSGSLKIHGLAAPDIGVYRCIAGS 986
Query: 116 SKKQLVSEPVTISLPKPIMQPTEAEPMEPDPTLSLSGGSAIGL 158
+++ +V + + + I +P EPM P + S +++G+
Sbjct: 987 AQETVVLKLIGTD-NRLIARPALREPMREYPGMDHSEANSLGV 1028
>gi|156564378 carcinoembryonic antigen-related cell adhesion
molecule 20 5L [Homo sapiens]
Length = 596
Score = 38.5 bits (88), Expect = 0.004
Identities = 39/127 (30%), Positives = 58/127 (45%), Gaps = 17/127 (13%)
Query: 59 IQSELNYSVILQWVVTMDPEPVLSWTFS-GVPCGMGEKLFIRRLSCEQLGTYMCIATNSK 117
I++ELN S+ LQ P WT +GE+L IR L+ E G Y C A+NS
Sbjct: 363 IEAELNSSLTLQCWAESKPGAEYRWTLEHSTGEHLGEQLIIRALTWEHDGIYNCTASNSL 422
Query: 118 KQLV-SEPVTISLPKPIMQPTEAEPMEPDPTLSLSGGSAIGLLAAGILGAGALIAGM-CF 175
L S V + + P + SLS G+ G++ GIL A+ + + F
Sbjct: 423 TGLARSTSVLVKVVGP-------------QSSSLSSGAIAGIV-IGILAVIAVASELGYF 468
Query: 176 IIIQSLR 182
+ I++ R
Sbjct: 469 LYIRNAR 475
>gi|156564393 carcinoembryonic antigen-related cell adhesion
molecule 20 5S [Homo sapiens]
Length = 584
Score = 38.5 bits (88), Expect = 0.004
Identities = 39/127 (30%), Positives = 58/127 (45%), Gaps = 17/127 (13%)
Query: 59 IQSELNYSVILQWVVTMDPEPVLSWTFS-GVPCGMGEKLFIRRLSCEQLGTYMCIATNSK 117
I++ELN S+ LQ P WT +GE+L IR L+ E G Y C A+NS
Sbjct: 363 IEAELNSSLTLQCWAESKPGAEYRWTLEHSTGEHLGEQLIIRALTWEHDGIYNCTASNSL 422
Query: 118 KQLV-SEPVTISLPKPIMQPTEAEPMEPDPTLSLSGGSAIGLLAAGILGAGALIAGM-CF 175
L S V + + P + SLS G+ G++ GIL A+ + + F
Sbjct: 423 TGLARSTSVLVKVVGP-------------QSSSLSSGAIAGIV-IGILAVIAVASELGYF 468
Query: 176 IIIQSLR 182
+ I++ R
Sbjct: 469 LYIRNAR 475
>gi|98986445 carcinoembryonic antigen-related cell adhesion molecule
5 preproprotein [Homo sapiens]
Length = 702
Score = 38.1 bits (87), Expect = 0.005
Identities = 23/97 (23%), Positives = 43/97 (44%), Gaps = 17/97 (17%)
Query: 76 DPEPVLSWTFSGVPCGMGEKLFIRRLSCEQLGTYMCIATN---SKKQLVSEPVTISLPKP 132
+P P SW +G+P + LFI +++ GTY C +N + + + +T+S
Sbjct: 620 NPSPQYSWRINGIPQQHTQVLFIAKITPNNNGTYACFVSNLATGRNNSIVKSITVS---- 675
Query: 133 IMQPTEAEPMEPDPTLSLSGGSAIGLLAAGILGAGAL 169
A P LS G+ +G++ ++G +
Sbjct: 676 ------ASGTSP----GLSAGATVGIMIGVLVGVALI 702
Score = 34.7 bits (78), Expect = 0.051
Identities = 22/81 (27%), Positives = 36/81 (44%), Gaps = 5/81 (6%)
Query: 76 DPEPVLSWTFSGVPCGMGEKLFIRRLSCEQLGTYMCIATNSKKQLVSEPVT-----ISLP 130
+P SW +G ++LFI ++ G+Y C A NS L VT P
Sbjct: 264 NPPAQYSWFVNGTFQQSTQELFIPNITVNNSGSYTCQAHNSDTGLNRTTVTTITVYAEPP 323
Query: 131 KPIMQPTEAEPMEPDPTLSLS 151
KP + + P+E + ++L+
Sbjct: 324 KPFITSNNSNPVEDEDAVALT 344
Score = 33.1 bits (74), Expect = 0.15
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 5/73 (6%)
Query: 76 DPEPVLSWTFSGVPCGMGEKLFIRRLSCEQLGTYMCIATNS---KKQLVSEPVTIS--LP 130
+P SW G ++LFI ++ + G Y C A NS + + +T+S LP
Sbjct: 442 NPPAQYSWLIDGNIQQHTQELFISNITEKNSGLYTCQANNSASGHSRTTVKTITVSAELP 501
Query: 131 KPIMQPTEAEPME 143
KP + ++P+E
Sbjct: 502 KPSISSNNSKPVE 514
>gi|118572606 hemicentin 1 [Homo sapiens]
Length = 5635
Score = 37.7 bits (86), Expect = 0.006
Identities = 35/133 (26%), Positives = 53/133 (39%), Gaps = 26/133 (19%)
Query: 63 LNYSVILQWVVTMDPEPVLSWTFSGVPCGMGEK---------LFIRRLSCEQLGTYMCIA 113
LN ++L T P P ++W G+ + L I R E GTYMC+A
Sbjct: 4001 LNNPILLPCEATGTPSPFITWQKEGINVNTSGRNHAVLPSGGLQISRAVREDAGTYMCVA 4060
Query: 114 TNS--------KKQLVSEPV--------TISLPKPIMQPTEAEPM-EPDPTLSLSGGSAI 156
N K + PV I++ KPI EA+ + PD T G + +
Sbjct: 4061 QNPAGTALGKIKLNVQVPPVISPHLKEYVIAVDKPITLSCEADGLPPPDITWHKDGRAIV 4120
Query: 157 GLLAAGILGAGAL 169
+ +L +G+L
Sbjct: 4121 ESIRQRVLSSGSL 4133
Score = 35.4 bits (80), Expect = 0.030
Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 15/79 (18%)
Query: 52 PAAIRGVIQSELNYSVILQWVVTMD------PEPVLSWTFSGVPC---------GMGEKL 96
P I G + + LN V++ +T++ P P+L+W GVP G+KL
Sbjct: 1638 PPMIEGNLATPLNKQVVIAHSLTLECKAAGNPSPILTWLKDGVPVKANDNIRIEAGGKKL 1697
Query: 97 FIRRLSCEQLGTYMCIATN 115
I G Y+C+AT+
Sbjct: 1698 EIMSAQEIDRGQYICVATS 1716
Score = 34.3 bits (77), Expect = 0.067
Identities = 29/94 (30%), Positives = 43/94 (45%), Gaps = 11/94 (11%)
Query: 31 DAAGGD-FPANLVLQLMPLKTFPAAIRGVIQSELNYSVILQWVVTMDPEPVLSWTFSG-- 87
+AAG D +L + ++P T + G + + L T P P L+WTF+
Sbjct: 4243 NAAGEDTHTVSLTVHVLPTFT---ELPGDVSLNKGEQLRLSCKATGIPLPKLTWTFNNNI 4299
Query: 88 VPCGMGE-----KLFIRRLSCEQLGTYMCIATNS 116
+P +L I R+S E GTY+C A NS
Sbjct: 4300 IPAHFDSVNGHSELVIERVSKEDSGTYVCTAENS 4333
Score = 32.7 bits (73), Expect = 0.19
Identities = 28/102 (27%), Positives = 42/102 (41%), Gaps = 14/102 (13%)
Query: 63 LNYSVILQWVVTMDPEPVLSWTFSGVPCGMGEK--------LFIRRLSCEQLGTYMCIAT 114
L + IL V DP P + W GV + + L I E G Y C+AT
Sbjct: 4363 LGGNAILNCEVKGDPTPTIQWNRKGVDIEISHRIRQLGNGSLAIYGTVNEDAGDYTCVAT 4422
Query: 115 NSKKQLVSEPVTISLPKPIMQPTEAEPMEPDPTLSLSGGSAI 156
N + +V ++++L P +EP T+ +GG I
Sbjct: 4423 N-EAGVVERSMSLTLQSP-----PIITLEPVETVINAGGKII 4458
Score = 29.6 bits (65), Expect = 1.6
Identities = 25/110 (22%), Positives = 48/110 (43%), Gaps = 12/110 (10%)
Query: 63 LNYSVILQWVVTMDPEPVLSWTFSGVPCGMGEKLFIR---------RLSCEQLGTYMCIA 113
+N + L P P L+W G P +K+ I R E G Y C+A
Sbjct: 2791 INNPISLYCETNAAPPPTLTWYKDGHPLTSSDKVLILPGGRVLQIPRAKVEDAGRYTCVA 2850
Query: 114 TN-SKKQLVSEPVTISLPKPIMQPTEAEPMEPDPTLSLSGGSAIGLLAAG 162
N + + + V + +P PI++ ++ + + T+ ++ + I L++G
Sbjct: 2851 VNEAGEDSLQYDVRVLVP-PIIKGANSD-LPEEVTVLVNKSALIECLSSG 2898
Score = 28.5 bits (62), Expect = 3.7
Identities = 18/71 (25%), Positives = 29/71 (40%), Gaps = 9/71 (12%)
Query: 77 PEPVLSWTFSGVPCGM---------GEKLFIRRLSCEQLGTYMCIATNSKKQLVSEPVTI 127
P P ++W G P G+ G L + + E G Y CIA+N ++ +
Sbjct: 3463 PAPSMAWLRDGQPLGLDAHLTVSTHGMVLQLLKAETEDSGKYTCIASNEAGEVSKHFILK 3522
Query: 128 SLPKPIMQPTE 138
L P + +E
Sbjct: 3523 VLEPPHINGSE 3533
Score = 27.3 bits (59), Expect = 8.2
Identities = 21/78 (26%), Positives = 30/78 (38%), Gaps = 13/78 (16%)
Query: 59 IQSELNYSVILQWVVTMDPEPVLSW-------------TFSGVPCGMGEKLFIRRLSCEQ 105
+ E+ +V L V PEP + W + S + LFI L
Sbjct: 802 VSMEIGSNVTLPCYVQGYPEPTIKWRRLDNMPIFSRPFSVSSISQLRTGALFILNLWASD 861
Query: 106 LGTYMCIATNSKKQLVSE 123
GTY+C A N ++ SE
Sbjct: 862 KGTYICEAENQFGKIQSE 879
Score = 27.3 bits (59), Expect = 8.2
Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 11/82 (13%)
Query: 63 LNYSVILQWVVTMDPEPVLSWTFSGVPCGMGEK----------LFIRRLSCEQLGTYMCI 112
LN V L+ V P P + W G P +G+ L ++ G Y C
Sbjct: 1467 LNRDVALECQVKGTPFPDIHWFKDGKPLFLGDPNVELLDRGQVLHLKNARRNDKGRYQCT 1526
Query: 113 ATNSK-KQLVSEPVTISLPKPI 133
+N+ KQ +TI +P I
Sbjct: 1527 VSNAAGKQAKDIKLTIYIPPSI 1548
Score = 27.3 bits (59), Expect = 8.2
Identities = 17/60 (28%), Positives = 23/60 (38%), Gaps = 10/60 (16%)
Query: 67 VILQWVVTMDPEPVLSWTFSGVPCGM----------GEKLFIRRLSCEQLGTYMCIATNS 116
V LQ + P P ++W P G L I + E G Y C+ATN+
Sbjct: 1844 VALQCIANGIPNPSITWLKDDQPVNTAQGNLKIQSSGRVLQIAKTLLEDAGRYTCVATNA 1903
>gi|169178458 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 3874
Score = 37.0 bits (84), Expect = 0.010
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 13/104 (12%)
Query: 41 LVLQLMPL-KTFPAAIRGVIQSELNYSVILQWVVTMDPEPVLSWTFSG--VPCGM----- 92
L +Q P+ K P+ +R V + E V+L + P P ++W G V G+
Sbjct: 2751 LTVQASPVVKPLPSVVRAVAEEE----VLLPCEASGIPRPTITWQKEGLNVATGVSTQVL 2806
Query: 93 -GEKLFIRRLSCEQLGTYMCIATNSKKQLVSEPVTISLPKPIMQ 135
G +L I S E G Y+CIA NS + + + P+++
Sbjct: 2807 PGGQLRIAHASPEDAGNYLCIAKNSAGSAMGKTRLVVQVPPVIE 2850
Score = 33.9 bits (76), Expect = 0.087
Identities = 21/79 (26%), Positives = 30/79 (37%), Gaps = 15/79 (18%)
Query: 52 PAAIRGVIQSELNYSVILQWVVTMD------PEPVLSWTFSGVPCG---------MGEKL 96
P I G + SV+ V T++ P P ++W G P G G+ L
Sbjct: 1064 PPQIAGPREPPTQVSVVQDGVATLECNATGKPPPTVTWERDGQPVGAELGLQLQNQGQSL 1123
Query: 97 FIRRLSCEQLGTYMCIATN 115
+ R G Y C+A N
Sbjct: 1124 HVERAQAAHTGRYSCVAEN 1142
Score = 31.2 bits (69), Expect = 0.57
Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 11/101 (10%)
Query: 41 LVLQLMPLKTFPAAIRGVIQSELNYSVILQWVVTMDPEPVLSWTFSGVPC---------G 91
L +Q+ P TF + ++L V+ P P ++W +P
Sbjct: 1927 LTVQVPP--TFENPKTETVSQVAGSPLVLTCDVSGVPAPTVTWLKDRMPVESSAVHGVVS 1984
Query: 92 MGEKLFIRRLSCEQLGTYMCIATNSKKQLVSEPVTISLPKP 132
G +L + RL Q GTY C+A N++ + + V L P
Sbjct: 1985 RGGRLQLSRLQPAQAGTYTCVAENTQAEARKDFVVAVLVAP 2025
Score = 29.6 bits (65), Expect = 1.6
Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 9/66 (13%)
Query: 59 IQSELNYSVILQWVVTMDPEPVLSWTFSGVPC---------GMGEKLFIRRLSCEQLGTY 109
+++++N ++ L+ P P + W G P G G L I+ G Y
Sbjct: 1458 VKTKVNSTLTLECESWAVPPPTIRWYKDGQPVTPSSRLQVLGEGRLLQIQPTQVSDSGRY 1517
Query: 110 MCIATN 115
+C+ATN
Sbjct: 1518 LCVATN 1523
Score = 29.6 bits (65), Expect = 1.6
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 9/49 (18%)
Query: 77 PEPVLSWTFSGVPCGMGE---------KLFIRRLSCEQLGTYMCIATNS 116
PEP ++W G P E +L ++ L + GTY C A N+
Sbjct: 2874 PEPNITWDKDGQPVSGAEGKFTIQPSGELLVKNLEGQDAGTYTCTAENA 2922
Score = 29.6 bits (65), Expect = 1.6
Identities = 20/78 (25%), Positives = 28/78 (35%), Gaps = 8/78 (10%)
Query: 66 SVILQWVVTMDPEPVLSWTFSGVPCG--------MGEKLFIRRLSCEQLGTYMCIATNSK 117
S+ L VV DP P + W G+P L I R + G Y C+A N
Sbjct: 3044 SIQLDCVVRGDPVPDIHWIKDGLPLRGSHLRHQLQNGSLTIHRTERDDAGRYQCLAENEM 3103
Query: 118 KQLVSEPVTISLPKPIMQ 135
+ + P+ Q
Sbjct: 3104 GVAKKVVILVLQSAPVFQ 3121
Score = 28.1 bits (61), Expect = 4.8
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 16/89 (17%)
Query: 64 NYSVILQWVVTMDPEPVLSW--------TFSGVPCGM-GEKLFIRRLSCEQLGTYMCIAT 114
N SV L+ + + P P +SW ++ GV + G L I + G+Y C+A+
Sbjct: 709 NASVTLECLASGVPPPDVSWFKGHQPVSSWMGVTVSVDGRVLRIEQAQLSDAGSYRCVAS 768
Query: 115 NSKKQL-------VSEPVTISLPKPIMQP 136
N V+ P I+LP + P
Sbjct: 769 NVAGSTELRYGLRVNVPPRITLPPSLPGP 797
Score = 27.7 bits (60), Expect = 6.3
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 9/53 (16%)
Query: 73 VTMDPEPVLSWTFSGVPCGMGEK---------LFIRRLSCEQLGTYMCIATNS 116
VT P+P L+W G P G+ L + + + G Y CIA N+
Sbjct: 1278 VTGHPQPKLTWFKDGRPLARGDAHHISPDGVLLQVLQANLSSAGHYSCIAANA 1330
Score = 27.7 bits (60), Expect = 6.3
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 8/57 (14%)
Query: 67 VILQWVVTMDPEPVLSWTFSGVPCGMGEK--------LFIRRLSCEQLGTYMCIATN 115
V L+ T +P P + W +G P + L++ + GTY C+A N
Sbjct: 3135 VALRCQATGEPTPTIEWLQAGQPLRASRRLRTLPDGSLWLENVETGDAGTYDCVAHN 3191
Score = 27.3 bits (59), Expect = 8.2
Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 10/87 (11%)
Query: 58 VIQSELNYSVILQWVVTMDPEPVLSWTFSGVPCGM---------GEKLFIRRLSCEQLGT 108
V+++ V L+ V P P LSW G+P G L + G
Sbjct: 414 VVKAVAGRPVALECVARGHPSPTLSWHHEGLPVAESNESRLETDGSVLRLESPGEASSGL 473
Query: 109 YMCIATNSKKQLVSE-PVTISLPKPIM 134
Y C+A++ + V + V + +P ++
Sbjct: 474 YSCVASSPAGEAVLQYSVEVQVPPQLL 500
Score = 27.3 bits (59), Expect = 8.2
Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 9/59 (15%)
Query: 66 SVILQWVVTMDPEPVLSWTFSGVPCGM---------GEKLFIRRLSCEQLGTYMCIATN 115
+V LQ +P P +SW +G+P G+ L + +YMC+A N
Sbjct: 1671 TVSLQCPALGNPVPTISWLQNGLPFSPSPRLQVLEDGQVLQVSTAEVADAASYMCVAEN 1729
>gi|239749684 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 5065
Score = 37.0 bits (84), Expect = 0.010
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 13/104 (12%)
Query: 41 LVLQLMPL-KTFPAAIRGVIQSELNYSVILQWVVTMDPEPVLSWTFSG--VPCGM----- 92
L +Q P+ K P+ +R V + E V+L + P P ++W G V G+
Sbjct: 3942 LTVQASPVVKPLPSVVRAVAEEE----VLLPCEASGIPRPTITWQKEGLNVATGVSTQVL 3997
Query: 93 -GEKLFIRRLSCEQLGTYMCIATNSKKQLVSEPVTISLPKPIMQ 135
G +L I S E G Y+CIA NS + + + P+++
Sbjct: 3998 PGGQLRIAHASPEDAGNYLCIAKNSAGSAMGKTRLVVQVPPVIE 4041
Score = 33.9 bits (76), Expect = 0.087
Identities = 21/79 (26%), Positives = 30/79 (37%), Gaps = 15/79 (18%)
Query: 52 PAAIRGVIQSELNYSVILQWVVTMD------PEPVLSWTFSGVPCG---------MGEKL 96
P I G + SV+ V T++ P P ++W G P G G+ L
Sbjct: 2255 PPQIAGPREPPTQVSVVQDGVATLECNATGKPPPTVTWERDGQPVGAELGLQLQNQGQSL 2314
Query: 97 FIRRLSCEQLGTYMCIATN 115
+ R G Y C+A N
Sbjct: 2315 HVERAQAAHTGRYSCVAEN 2333
Score = 31.2 bits (69), Expect = 0.57
Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 11/101 (10%)
Query: 41 LVLQLMPLKTFPAAIRGVIQSELNYSVILQWVVTMDPEPVLSWTFSGVPC---------G 91
L +Q+ P TF + ++L V+ P P ++W +P
Sbjct: 3118 LTVQVPP--TFENPKTETVSQVAGSPLVLTCDVSGVPAPTVTWLKDRMPVESSAVHGVVS 3175
Query: 92 MGEKLFIRRLSCEQLGTYMCIATNSKKQLVSEPVTISLPKP 132
G +L + RL Q GTY C+A N++ + + V L P
Sbjct: 3176 RGGRLQLSRLQPAQAGTYTCVAENTQAEARKDFVVAVLVAP 3216
Score = 29.6 bits (65), Expect = 1.6
Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 9/66 (13%)
Query: 59 IQSELNYSVILQWVVTMDPEPVLSWTFSGVPC---------GMGEKLFIRRLSCEQLGTY 109
+++++N ++ L+ P P + W G P G G L I+ G Y
Sbjct: 2649 VKTKVNSTLTLECESWAVPPPTIRWYKDGQPVTPSSRLQVLGEGRLLQIQPTQVSDSGRY 2708
Query: 110 MCIATN 115
+C+ATN
Sbjct: 2709 LCVATN 2714
Score = 29.6 bits (65), Expect = 1.6
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 9/49 (18%)
Query: 77 PEPVLSWTFSGVPCGMGE---------KLFIRRLSCEQLGTYMCIATNS 116
PEP ++W G P E +L ++ L + GTY C A N+
Sbjct: 4065 PEPNITWDKDGQPVSGAEGKFTIQPSGELLVKNLEGQDAGTYTCTAENA 4113
Score = 29.6 bits (65), Expect = 1.6
Identities = 20/78 (25%), Positives = 28/78 (35%), Gaps = 8/78 (10%)
Query: 66 SVILQWVVTMDPEPVLSWTFSGVPCG--------MGEKLFIRRLSCEQLGTYMCIATNSK 117
S+ L VV DP P + W G+P L I R + G Y C+A N
Sbjct: 4235 SIQLDCVVRGDPVPDIHWIKDGLPLRGSHLRHQLQNGSLTIHRTERDDAGRYQCLAENEM 4294
Query: 118 KQLVSEPVTISLPKPIMQ 135
+ + P+ Q
Sbjct: 4295 GVAKKVVILVLQSAPVFQ 4312
Score = 28.1 bits (61), Expect = 4.8
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 16/89 (17%)
Query: 64 NYSVILQWVVTMDPEPVLSW--------TFSGVPCGM-GEKLFIRRLSCEQLGTYMCIAT 114
N SV L+ + + P P +SW ++ GV + G L I + G+Y C+A+
Sbjct: 1900 NASVTLECLASGVPPPDVSWFKGHQPVSSWMGVTVSVDGRVLRIEQAQLSDAGSYRCVAS 1959
Query: 115 NSKKQL-------VSEPVTISLPKPIMQP 136
N V+ P I+LP + P
Sbjct: 1960 NVAGSTELRYGLRVNVPPRITLPPSLPGP 1988
Score = 27.7 bits (60), Expect = 6.3
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 9/53 (16%)
Query: 73 VTMDPEPVLSWTFSGVPCGMGEK---------LFIRRLSCEQLGTYMCIATNS 116
VT P+P L+W G P G+ L + + + G Y CIA N+
Sbjct: 2469 VTGHPQPKLTWFKDGRPLARGDAHHISPDGVLLQVLQANLSSAGHYSCIAANA 2521
Score = 27.7 bits (60), Expect = 6.3
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 8/57 (14%)
Query: 67 VILQWVVTMDPEPVLSWTFSGVPCGMGEK--------LFIRRLSCEQLGTYMCIATN 115
V L+ T +P P + W +G P + L++ + GTY C+A N
Sbjct: 4326 VALRCQATGEPTPTIEWLQAGQPLRASRRLRTLPDGSLWLENVETGDAGTYDCVAHN 4382
Score = 27.3 bits (59), Expect = 8.2
Identities = 17/51 (33%), Positives = 22/51 (43%), Gaps = 3/51 (5%)
Query: 69 LQWVVTMDPEPVLSWTFSGVPC---GMGEKLFIRRLSCEQLGTYMCIATNS 116
L V +PEP LSW+ GV G + + G Y C A+NS
Sbjct: 1139 LNCVAEGNPEPQLSWSKDGVVLQGRGPQGSVHFAAIRTSDAGRYRCEASNS 1189
Score = 27.3 bits (59), Expect = 8.2
Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 10/87 (11%)
Query: 58 VIQSELNYSVILQWVVTMDPEPVLSWTFSGVPCGM---------GEKLFIRRLSCEQLGT 108
V+++ V L+ V P P LSW G+P G L + G
Sbjct: 1605 VVKAVAGRPVALECVARGHPSPTLSWHHEGLPVAESNESRLETDGSVLRLESPGEASSGL 1664
Query: 109 YMCIATNSKKQLVSE-PVTISLPKPIM 134
Y C+A++ + V + V + +P ++
Sbjct: 1665 YSCVASSPAGEAVLQYSVEVQVPPQLL 1691
Score = 27.3 bits (59), Expect = 8.2
Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 9/59 (15%)
Query: 66 SVILQWVVTMDPEPVLSWTFSGVPCGM---------GEKLFIRRLSCEQLGTYMCIATN 115
+V LQ +P P +SW +G+P G+ L + +YMC+A N
Sbjct: 2862 TVSLQCPALGNPVPTISWLQNGLPFSPSPRLQVLEDGQVLQVSTAEVADAASYMCVAEN 2920
>gi|169177000 PREDICTED: hemicentin 2 [Homo sapiens]
Length = 3783
Score = 37.0 bits (84), Expect = 0.010
Identities = 29/104 (27%), Positives = 47/104 (45%), Gaps = 13/104 (12%)
Query: 41 LVLQLMPL-KTFPAAIRGVIQSELNYSVILQWVVTMDPEPVLSWTFSG--VPCGM----- 92
L +Q P+ K P+ +R V + E V+L + P P ++W G V G+
Sbjct: 2660 LTVQASPVVKPLPSVVRAVAEEE----VLLPCEASGIPRPTITWQKEGLNVATGVSTQVL 2715
Query: 93 -GEKLFIRRLSCEQLGTYMCIATNSKKQLVSEPVTISLPKPIMQ 135
G +L I S E G Y+CIA NS + + + P+++
Sbjct: 2716 PGGQLRIAHASPEDAGNYLCIAKNSAGSAMGKTRLVVQVPPVIE 2759
Score = 33.9 bits (76), Expect = 0.087
Identities = 21/79 (26%), Positives = 30/79 (37%), Gaps = 15/79 (18%)
Query: 52 PAAIRGVIQSELNYSVILQWVVTMD------PEPVLSWTFSGVPCG---------MGEKL 96
P I G + SV+ V T++ P P ++W G P G G+ L
Sbjct: 973 PPQIAGPREPPTQVSVVQDGVATLECNATGKPPPTVTWERDGQPVGAELGLQLQNQGQSL 1032
Query: 97 FIRRLSCEQLGTYMCIATN 115
+ R G Y C+A N
Sbjct: 1033 HVERAQAAHTGRYSCVAEN 1051
Score = 31.6 bits (70), Expect = 0.43
Identities = 21/78 (26%), Positives = 29/78 (37%), Gaps = 8/78 (10%)
Query: 66 SVILQWVVTMDPEPVLSWTFSGVPCG--------MGEKLFIRRLSCEQLGTYMCIATNSK 117
S+ L VV DP P + W G+P L IRR + G Y C+A N
Sbjct: 2953 SIQLDCVVRGDPVPDIHWIKDGLPLRGSHLRHQLQNGSLTIRRTERDDAGRYQCLAENEM 3012
Query: 118 KQLVSEPVTISLPKPIMQ 135
+ + P+ Q
Sbjct: 3013 GVAKKVVILVLQSAPVFQ 3030
Score = 31.2 bits (69), Expect = 0.57
Identities = 25/101 (24%), Positives = 41/101 (40%), Gaps = 11/101 (10%)
Query: 41 LVLQLMPLKTFPAAIRGVIQSELNYSVILQWVVTMDPEPVLSWTFSGVPC---------G 91
L +Q+ P TF + ++L V+ P P ++W +P
Sbjct: 1836 LTVQVPP--TFENPKTETVSQVAGSPLVLTCDVSGVPAPTVTWLKDRMPVESSAVHGVVS 1893
Query: 92 MGEKLFIRRLSCEQLGTYMCIATNSKKQLVSEPVTISLPKP 132
G +L + RL Q GTY C+A N++ + + V L P
Sbjct: 1894 RGGRLQLSRLQPAQAGTYTCVAENTQAEARKDFVVAVLVAP 1934
Score = 30.4 bits (67), Expect = 0.97
Identities = 22/78 (28%), Positives = 34/78 (43%), Gaps = 11/78 (14%)
Query: 49 KTFPAAIRGV--IQSELNYSVILQWVVTMDPEPVLSWTFSGVPC---------GMGEKLF 97
K P A GV +++++N ++ L+ P P + W G P G G L
Sbjct: 1355 KDDPLAEVGVKEVKTKVNSTLTLECESWAVPPPTIRWYKDGQPVTPSSRLQVLGEGRLLQ 1414
Query: 98 IRRLSCEQLGTYMCIATN 115
I+ G Y+C+ATN
Sbjct: 1415 IQPTQVSDSGRYLCVATN 1432
Score = 29.6 bits (65), Expect = 1.6
Identities = 15/49 (30%), Positives = 22/49 (44%), Gaps = 9/49 (18%)
Query: 77 PEPVLSWTFSGVPCGMGE---------KLFIRRLSCEQLGTYMCIATNS 116
PEP ++W G P E +L ++ L + GTY C A N+
Sbjct: 2783 PEPNITWDKDGQPVSGAEGKFTIQPSGELLVKNLEGQDAGTYTCTAENA 2831
Score = 28.1 bits (61), Expect = 4.8
Identities = 24/89 (26%), Positives = 38/89 (42%), Gaps = 16/89 (17%)
Query: 64 NYSVILQWVVTMDPEPVLSW--------TFSGVPCGM-GEKLFIRRLSCEQLGTYMCIAT 114
N SV L+ + + P P +SW ++ GV + G L I + G+Y C+A+
Sbjct: 618 NASVTLECLASGVPPPDVSWFKGHQPVSSWMGVTVSVDGRVLRIEQAQLSDAGSYRCVAS 677
Query: 115 NSKKQL-------VSEPVTISLPKPIMQP 136
N V+ P I+LP + P
Sbjct: 678 NVAGSTELRYGLRVNVPPRITLPPSLPGP 706
Score = 27.7 bits (60), Expect = 6.3
Identities = 16/53 (30%), Positives = 23/53 (43%), Gaps = 9/53 (16%)
Query: 73 VTMDPEPVLSWTFSGVPCGMGEK---------LFIRRLSCEQLGTYMCIATNS 116
VT P+P L+W G P G+ L + + + G Y CIA N+
Sbjct: 1187 VTGHPQPKLTWFKDGRPLARGDAHHISPDGVLLQVLQANLSSAGHYSCIAANA 1239
Score = 27.7 bits (60), Expect = 6.3
Identities = 15/57 (26%), Positives = 24/57 (42%), Gaps = 8/57 (14%)
Query: 67 VILQWVVTMDPEPVLSWTFSGVPCGMGEK--------LFIRRLSCEQLGTYMCIATN 115
V L+ T +P P + W +G P + L++ + GTY C+A N
Sbjct: 3044 VALRCQATGEPTPTIEWLQAGQPLRASRRLRTLPDGSLWLENVETGDAGTYDCVAHN 3100
Score = 27.3 bits (59), Expect = 8.2
Identities = 20/87 (22%), Positives = 35/87 (40%), Gaps = 10/87 (11%)
Query: 58 VIQSELNYSVILQWVVTMDPEPVLSWTFSGVPCGM---------GEKLFIRRLSCEQLGT 108
V+++ V L+ V P P LSW G+P G L + G
Sbjct: 323 VVKAVAGRPVALECVARGHPSPTLSWHHEGLPVAESNESRLETDGSVLRLESPGEASSGL 382
Query: 109 YMCIATNSKKQLVSE-PVTISLPKPIM 134
Y C+A++ + V + V + +P ++
Sbjct: 383 YSCVASSPAGEAVLQYSVEVQVPPQLL 409
Score = 27.3 bits (59), Expect = 8.2
Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 9/59 (15%)
Query: 66 SVILQWVVTMDPEPVLSWTFSGVPCGM---------GEKLFIRRLSCEQLGTYMCIATN 115
+V LQ +P P +SW +G+P G+ L + +YMC+A N
Sbjct: 1580 TVSLQCPALGNPVPTISWLQNGLPFSPSPRLQVLEDGQVLQVSTAEVADAASYMCVAEN 1638
>gi|15826840 PTK7 protein tyrosine kinase 7 isoform a precursor
[Homo sapiens]
Length = 1070
Score = 37.0 bits (84), Expect = 0.010
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 18/117 (15%)
Query: 65 YSVILQWVVTMDPEPVLSWTFSGV---PCGMGEK--------LFIRRLSCEQLGTYMCIA 113
++ +LQ DP+P++ W P +G + L I ++ E G Y CIA
Sbjct: 607 HTALLQCEAQGDPKPLIQWKGKDRILDPTKLGPRMHIFQNGSLVIHDVAPEDSGRYTCIA 666
Query: 114 TNSKKQLVSEPVTISLPKPIMQPTEAEPMEPDP-----TLSLSGGSAIGLLAAGILG 165
NS +E + KP+ + +E P P P T+ LS G+A+ + A +LG
Sbjct: 667 GNSCNIKHTEAPLYVVDKPVPEESEG-PGSPPPYKMIQTIGLSVGAAVAYIIA-VLG 721
>gi|22902128 PTK7 protein tyrosine kinase 7 isoform c precursor
[Homo sapiens]
Length = 940
Score = 37.0 bits (84), Expect = 0.010
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 18/117 (15%)
Query: 65 YSVILQWVVTMDPEPVLSWTFSGV---PCGMGEK--------LFIRRLSCEQLGTYMCIA 113
++ +LQ DP+P++ W P +G + L I ++ E G Y CIA
Sbjct: 477 HTALLQCEAQGDPKPLIQWKGKDRILDPTKLGPRMHIFQNGSLVIHDVAPEDSGRYTCIA 536
Query: 114 TNSKKQLVSEPVTISLPKPIMQPTEAEPMEPDP-----TLSLSGGSAIGLLAAGILG 165
NS +E + KP+ + +E P P P T+ LS G+A+ + A +LG
Sbjct: 537 GNSCNIKHTEAPLYVVDKPVPEESEG-PGSPPPYKMIQTIGLSVGAAVAYIIA-VLG 591
>gi|22902126 PTK7 protein tyrosine kinase 7 isoform b precursor
[Homo sapiens]
Length = 1030
Score = 37.0 bits (84), Expect = 0.010
Identities = 33/117 (28%), Positives = 53/117 (45%), Gaps = 18/117 (15%)
Query: 65 YSVILQWVVTMDPEPVLSWTFSGV---PCGMGEK--------LFIRRLSCEQLGTYMCIA 113
++ +LQ DP+P++ W P +G + L I ++ E G Y CIA
Sbjct: 567 HTALLQCEAQGDPKPLIQWKGKDRILDPTKLGPRMHIFQNGSLVIHDVAPEDSGRYTCIA 626
Query: 114 TNSKKQLVSEPVTISLPKPIMQPTEAEPMEPDP-----TLSLSGGSAIGLLAAGILG 165
NS +E + KP+ + +E P P P T+ LS G+A+ + A +LG
Sbjct: 627 GNSCNIKHTEAPLYVVDKPVPEESEG-PGSPPPYKMIQTIGLSVGAAVAYIIA-VLG 681
>gi|149773484 leucine rich repeat and fibronectin type III domain
containing 1 [Homo sapiens]
Length = 771
Score = 35.4 bits (80), Expect = 0.030
Identities = 33/119 (27%), Positives = 49/119 (41%), Gaps = 15/119 (12%)
Query: 47 PLKTFPAAIRGVIQSELNYSVILQWVVTMDPEPVLSWTF-SGVPCGMGEKLFIRR----- 100
PL T A R ++ +V L+ DPEPV+ W G G + +R
Sbjct: 299 PLITRQAGGRALVVE--GQAVSLRCRAVGDPEPVVHWVAPDGRLLGNSSRTRVRGDGTLD 356
Query: 101 ---LSCEQLGTYMCIATNSKKQLVSEPVTISLPKPIMQPTEAEPMEPDPTLSLSGGSAI 156
+ GT+ CIA+N+ + + +P P+M P A P P L+ G S I
Sbjct: 357 VTITTLRDSGTFTCIASNAAGEATAPVEVCVVPLPLMAPPPAAP----PPLTEPGSSDI 411
>gi|40255157 leucine-rich repeats and immunoglobulin-like domains 3
isoform 2 [Homo sapiens]
Length = 1119
Score = 35.0 bits (79), Expect = 0.039
Identities = 41/171 (23%), Positives = 67/171 (39%), Gaps = 21/171 (12%)
Query: 33 AGGDFPANLVLQLMPLKTF--PAAIRGVIQSELNYSVILQWVVTMDPEPVLSWTFSGVPC 90
+ G AN L ++ +F P R V + E + +LQ + P P L+WT P
Sbjct: 681 SAGSISANATLTVLETPSFLRPLLDRTVTKGE---TAVLQCIAGGSPPPKLNWTKDDSPL 737
Query: 91 GMGEK---------LFIRRLSCEQLGTYMCIATNSKKQLVSEPVTISLPKPIMQPTEAEP 141
+ E+ L I G Y C +N+ L +E + L I PT P
Sbjct: 738 VVTERHFFAAGNQLLIIVDSDVSDAGKYTCEMSNT---LGTERGNVRL-SVIPTPTCDSP 793
Query: 142 MEPDPTLSLSGGSAIGLLAAGILGAGALIAGMCFIIIQSLRTDRQRIGICS 192
P+L G + +G++ I+ + G + + + R+R CS
Sbjct: 794 QMTAPSLDDDGWATVGVV---IIAVVCCVVGTSLVWVVIIYHTRRRNEDCS 841
>gi|209862903 leucine-rich repeats and immunoglobulin-like domains 3
isoform 1 [Homo sapiens]
Length = 1059
Score = 35.0 bits (79), Expect = 0.039
Identities = 41/171 (23%), Positives = 67/171 (39%), Gaps = 21/171 (12%)
Query: 33 AGGDFPANLVLQLMPLKTF--PAAIRGVIQSELNYSVILQWVVTMDPEPVLSWTFSGVPC 90
+ G AN L ++ +F P R V + E + +LQ + P P L+WT P
Sbjct: 621 SAGSISANATLTVLETPSFLRPLLDRTVTKGE---TAVLQCIAGGSPPPKLNWTKDDSPL 677
Query: 91 GMGEK---------LFIRRLSCEQLGTYMCIATNSKKQLVSEPVTISLPKPIMQPTEAEP 141
+ E+ L I G Y C +N+ L +E + L I PT P
Sbjct: 678 VVTERHFFAAGNQLLIIVDSDVSDAGKYTCEMSNT---LGTERGNVRL-SVIPTPTCDSP 733
Query: 142 MEPDPTLSLSGGSAIGLLAAGILGAGALIAGMCFIIIQSLRTDRQRIGICS 192
P+L G + +G++ I+ + G + + + R+R CS
Sbjct: 734 QMTAPSLDDDGWATVGVV---IIAVVCCVVGTSLVWVVIIYHTRRRNEDCS 781
>gi|51988914 fibroblast growth factor receptor-like 1 precursor
[Homo sapiens]
Length = 504
Score = 34.3 bits (77), Expect = 0.067
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 23/101 (22%)
Query: 38 PANLVLQLMP---LKTFP--AAIRGVIQ----------SELNYSVILQWVVTMDPEPVLS 82
P+ L+L L+P L FP AA RG + + L +V LQ V DP P+
Sbjct: 3 PSPLLLLLLPPLLLGAFPPAAAARGPPKMADKVVPRQVARLGRTVRLQCPVEGDPPPLTM 62
Query: 83 WTFSGVPCGMG--------EKLFIRRLSCEQLGTYMCIATN 115
WT G G + L ++++ E G Y+C ATN
Sbjct: 63 WTKDGRTIHSGWSRFRVLPQGLKVKQVEREDAGVYVCKATN 103
Score = 28.9 bits (63), Expect = 2.8
Identities = 20/80 (25%), Positives = 29/80 (36%), Gaps = 2/80 (2%)
Query: 95 KLFIRRLSCEQLGTYMCIATNSKKQLVSEPVTISLPKPIMQPTEAEPMEPDPTLSLSGGS 154
KL I R + G Y+C+ N+ LP P +P SL
Sbjct: 322 KLLITRARQDDAGMYICLGANTMGYSFRSAFLTVLPDP--KPPGPPVASSSSATSLPWPV 379
Query: 155 AIGLLAAGILGAGALIAGMC 174
IG+ A + G L+ +C
Sbjct: 380 VIGIPAGAVFILGTLLLWLC 399
Score = 27.7 bits (60), Expect = 6.3
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 4 KPQSPLPRNPVPAWSPPTTTTDPMLEKD 31
KP +P P P+P PP T D +KD
Sbjct: 404 KPCTPAPAPPLPGHRPPGTARDRSGDKD 431
>gi|51988910 fibroblast growth factor receptor-like 1 precursor
[Homo sapiens]
Length = 504
Score = 34.3 bits (77), Expect = 0.067
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 23/101 (22%)
Query: 38 PANLVLQLMP---LKTFP--AAIRGVIQ----------SELNYSVILQWVVTMDPEPVLS 82
P+ L+L L+P L FP AA RG + + L +V LQ V DP P+
Sbjct: 3 PSPLLLLLLPPLLLGAFPPAAAARGPPKMADKVVPRQVARLGRTVRLQCPVEGDPPPLTM 62
Query: 83 WTFSGVPCGMG--------EKLFIRRLSCEQLGTYMCIATN 115
WT G G + L ++++ E G Y+C ATN
Sbjct: 63 WTKDGRTIHSGWSRFRVLPQGLKVKQVEREDAGVYVCKATN 103
Score = 28.9 bits (63), Expect = 2.8
Identities = 20/80 (25%), Positives = 29/80 (36%), Gaps = 2/80 (2%)
Query: 95 KLFIRRLSCEQLGTYMCIATNSKKQLVSEPVTISLPKPIMQPTEAEPMEPDPTLSLSGGS 154
KL I R + G Y+C+ N+ LP P +P SL
Sbjct: 322 KLLITRARQDDAGMYICLGANTMGYSFRSAFLTVLPDP--KPPGPPVASSSSATSLPWPV 379
Query: 155 AIGLLAAGILGAGALIAGMC 174
IG+ A + G L+ +C
Sbjct: 380 VIGIPAGAVFILGTLLLWLC 399
Score = 27.7 bits (60), Expect = 6.3
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 4 KPQSPLPRNPVPAWSPPTTTTDPMLEKD 31
KP +P P P+P PP T D +KD
Sbjct: 404 KPCTPAPAPPLPGHRPPGTARDRSGDKD 431
>gi|51988912 fibroblast growth factor receptor-like 1 precursor
[Homo sapiens]
Length = 504
Score = 34.3 bits (77), Expect = 0.067
Identities = 32/101 (31%), Positives = 45/101 (44%), Gaps = 23/101 (22%)
Query: 38 PANLVLQLMP---LKTFP--AAIRGVIQ----------SELNYSVILQWVVTMDPEPVLS 82
P+ L+L L+P L FP AA RG + + L +V LQ V DP P+
Sbjct: 3 PSPLLLLLLPPLLLGAFPPAAAARGPPKMADKVVPRQVARLGRTVRLQCPVEGDPPPLTM 62
Query: 83 WTFSGVPCGMG--------EKLFIRRLSCEQLGTYMCIATN 115
WT G G + L ++++ E G Y+C ATN
Sbjct: 63 WTKDGRTIHSGWSRFRVLPQGLKVKQVEREDAGVYVCKATN 103
Score = 28.9 bits (63), Expect = 2.8
Identities = 20/80 (25%), Positives = 29/80 (36%), Gaps = 2/80 (2%)
Query: 95 KLFIRRLSCEQLGTYMCIATNSKKQLVSEPVTISLPKPIMQPTEAEPMEPDPTLSLSGGS 154
KL I R + G Y+C+ N+ LP P +P SL
Sbjct: 322 KLLITRARQDDAGMYICLGANTMGYSFRSAFLTVLPDP--KPPGPPVASSSSATSLPWPV 379
Query: 155 AIGLLAAGILGAGALIAGMC 174
IG+ A + G L+ +C
Sbjct: 380 VIGIPAGAVFILGTLLLWLC 399
Score = 27.7 bits (60), Expect = 6.3
Identities = 12/28 (42%), Positives = 15/28 (53%)
Query: 4 KPQSPLPRNPVPAWSPPTTTTDPMLEKD 31
KP +P P P+P PP T D +KD
Sbjct: 404 KPCTPAPAPPLPGHRPPGTARDRSGDKD 431
>gi|54792136 follistatin-like 4 [Homo sapiens]
Length = 842
Score = 34.3 bits (77), Expect = 0.067
Identities = 25/121 (20%), Positives = 49/121 (40%), Gaps = 11/121 (9%)
Query: 41 LVLQLMPLKTFPAAIRGVIQSELNYSVILQWVVTMDPEPVLSWTFSGVPC---------- 90
+ Q++ L P V + S +L V D P + W +G+
Sbjct: 240 MAFQVVQLSLAPEDRVSVTTVTVGLSTVLTCAVHGDLRPPIIWKRNGLTLNFLDLEDIND 299
Query: 91 -GMGEKLFIRRLSCEQLGTYMCIATNSKKQLVSEPVTISLPKPIMQPTEAEPMEPDPTLS 149
G + L+I +++ +G Y C A+ ++ + + +++P I E++ EP S
Sbjct: 300 FGEDDSLYITKVTTIHMGNYTCHASGHEQLFQTHVLQVNVPPVIRVYPESQAQEPGVAAS 359
Query: 150 L 150
L
Sbjct: 360 L 360
>gi|134152686 receptor tyrosine kinase-like orphan receptor 1
isoform 2 [Homo sapiens]
Length = 393
Score = 33.9 bits (76), Expect = 0.087
Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 14/101 (13%)
Query: 59 IQSELNYSVILQWVVTMDPEPVLSWTFSGVPCGM------------GEKLFIRRLSCEQL 106
I + L + L V+ +P P + W + P G +L IR L
Sbjct: 67 ITTSLGQTAELHCKVSGNPPPTIRWFKNDAPVVQEPRRLSFRSTIYGSRLRIRNLDTTDT 126
Query: 107 GTYMCIATNSKKQLVSEPVTISL--PKPIMQPTEAEPMEPD 145
G + C+ATN K+ + S V P P P ++ E D
Sbjct: 127 GYFQCVATNGKEVVSSTGVLFVKFGPPPTASPGYSDEYEED 167
>gi|134152725 receptor tyrosine kinase-like orphan receptor 1
isoform 1 [Homo sapiens]
Length = 937
Score = 33.9 bits (76), Expect = 0.087
Identities = 26/101 (25%), Positives = 39/101 (38%), Gaps = 14/101 (13%)
Query: 59 IQSELNYSVILQWVVTMDPEPVLSWTFSGVPCGM------------GEKLFIRRLSCEQL 106
I + L + L V+ +P P + W + P G +L IR L
Sbjct: 67 ITTSLGQTAELHCKVSGNPPPTIRWFKNDAPVVQEPRRLSFRSTIYGSRLRIRNLDTTDT 126
Query: 107 GTYMCIATNSKKQLVSEPVTISL--PKPIMQPTEAEPMEPD 145
G + C+ATN K+ + S V P P P ++ E D
Sbjct: 127 GYFQCVATNGKEVVSSTGVLFVKFGPPPTASPGYSDEYEED 167
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.416
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,612,055
Number of Sequences: 37866
Number of extensions: 429565
Number of successful extensions: 2659
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 105
Number of HSP's that attempted gapping in prelim test: 2297
Number of HSP's gapped (non-prelim): 462
length of query: 192
length of database: 18,247,518
effective HSP length: 97
effective length of query: 95
effective length of database: 14,574,516
effective search space: 1384579020
effective search space used: 1384579020
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.