Guide to the Human Genome
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Name: ROR1 Sequence: fasta or formatted (393aa) NCBI GI: 134152686
Description:

receptor tyrosine kinase-like orphan receptor 1 isoform 2

Referenced in:

Receptor Tyrosine Kinases

Other entries for this name:
alt prot [937aa] receptor tyrosine kinase-like orphan receptor 1 isoform 1
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             6.6         26           3
 C cysteine            4.6         18           1
 D aspartate           4.3         17           1
 E glutamate           6.4         25           2
 F phenylalanine       3.8         15           1
 G glycine             5.9         23           2
 H histidine           2.3          9           1
 I isoleucine          4.8         19           1
 K lysine              3.6         14           1
 L leucine             8.1         32           3
 M methionine          2.0          8           1
 N asparagine          5.6         22           2
 P proline             8.1         32           3
 Q glutamine           3.6         14           1
 R arginine            6.4         25           3
 S serine              8.1         32           2
 T threonine           7.1         28           2
 V valine              4.1         16           2
 W tryptophan          1.0          4           1
 Y tyrosine            3.6         14           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   receptor tyrosine kinase-like orphan receptor 1 iso... 
ROR1                  0.995   receptor tyrosine kinase-like orphan receptor 1 iso...
ROR2                  0.619   receptor tyrosine kinase-like orphan receptor 2 prec...
PLG                   0.079   plasminogen 
HGF                   0.079   hepatocyte growth factor isoform 5 precursor 
HGF                   0.079   hepatocyte growth factor isoform 2 precursor 
HGF                   0.079   hepatocyte growth factor isoform 1 preproprotein [Ho...
HGF                   0.075   hepatocyte growth factor isoform 4 precursor 
HGF                   0.075   hepatocyte growth factor isoform 3 precursor 
MST1                  0.074   macrophage stimulating 1 (hepatocyte growth factor-...
LPA                   0.070   lipoprotein Lp(a) precursor 
F2                    0.069   coagulation factor II preproprotein 
LPAL2                 0.066   lipoprotein, Lp(a)-like 2 precursor 
LPAL2                 0.066   lipoprotein, Lp(a)-like 2 precursor 
MUSK                  0.060   skeletal muscle receptor tyrosine kinase 
PLAT                  0.050   plasminogen activator, tissue isoform 1 preproprotein...
PLAT                  0.050   plasminogen activator, tissue isoform 3 preproprotei...
F12                   0.050   coagulation factor XII precursor 
PLAU                  0.046   plasminogen activator, urokinase isoform 2 
PLAU                  0.046   plasminogen activator, urokinase isoform 1 preproprot...
KREMEN1               0.046   kringle-containing transmembrane protein 1 isoform 2...
KREMEN1               0.046   kringle-containing transmembrane protein 1 isoform ...
SDK2                  0.044   sidekick 2 
LOC100134174          0.044   PREDICTED: similar to sidekick homolog 2 (chicken) ...
TTN                   0.044   titin isoform N2-A 
HGFAC                 0.044   HGF activator preproprotein 
CDON                  0.043   surface glycoprotein, Ig superfamily member 
BOC                   0.041   brother of CDO 
TTN                   0.040   titin isoform novex-2 
TTN                   0.040   titin isoform novex-1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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