Search of human proteins with 169212963

Search of human proteins with 169212963

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169212963 PREDICTED: hypothetical protein [Homo sapiens]
         (134 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169212963 PREDICTED: hypothetical protein [Homo sapiens]           280   2e-76
gi|169213148 PREDICTED: hypothetical protein [Homo sapiens]           280   2e-76
gi|169212812 PREDICTED: hypothetical protein [Homo sapiens]           280   2e-76
gi|89886480 zinedin isoform 2 [Homo sapiens]                           31   0.26 
gi|89886477 zinedin isoform 1 [Homo sapiens]                           31   0.26 
gi|239752864 PREDICTED: hypothetical protein [Homo sapiens]            30   0.44 
gi|239747416 PREDICTED: hypothetical protein XP_002346693 [Homo ...    30   0.44 
gi|218749883 alpha 1,2-mannosidase [Homo sapiens]                      30   0.76 
gi|42733592 hypothetical protein LOC399693 [Homo sapiens]              30   0.76 
gi|194248077 Kruppel-like factor 4 (gut) [Homo sapiens]                29   0.99 
gi|239757500 PREDICTED: hypothetical protein [Homo sapiens]            29   1.3  
gi|239752017 PREDICTED: hypothetical protein XP_002348069 [Homo ...    29   1.3  
gi|10092647 cardiolipin synthase 1 isoform 1 [Homo sapiens]            28   1.7  
gi|205360947 microtubule associated monoxygenase, calponin and L...    28   1.7  
gi|226530313 microtubule associated monoxygenase, calponin and L...    28   1.7  
gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]            28   2.2  
gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]            28   2.2  
gi|126116581 retina and anterior neural fold homeobox [Homo sapi...    28   2.2  
gi|59938774 cAMP responsive element binding protein 5 isoform be...    28   2.2  
gi|59938772 cAMP responsive element binding protein 5 isoform ga...    28   2.2  
gi|59938770 cAMP responsive element binding protein 5 isoform al...    28   2.2  
gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens]       28   2.9  
gi|41393606 reticulon 3 isoform d [Homo sapiens]                       27   3.8  
gi|5174655 reticulon 3 isoform a [Homo sapiens]                        27   3.8  
gi|27477095 nuclear receptor binding SET domain protein 1 isofor...    27   3.8  
gi|19923586 nuclear receptor binding SET domain protein 1 isofor...    27   3.8  
gi|85068580 homeobox B7 [Homo sapiens]                                 27   3.8  
gi|20127580 BTB (POZ) domain containing 2 [Homo sapiens]               27   3.8  
gi|197333879 genetic suppressor element 1 isoform 2 [Homo sapiens]     27   3.8  
gi|44955926 genetic suppressor element 1 isoform 1 [Homo sapiens]      27   3.8  

>gi|169212963 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 134

 Score =  280 bits (717), Expect = 2e-76
 Identities = 134/134 (100%), Positives = 134/134 (100%)

Query: 1   MARSGEQLITFPDYLVGFWKTHVQREGPRSHSLGTSSAFWLSPPLPGEGAAAGATAVGAE 60
           MARSGEQLITFPDYLVGFWKTHVQREGPRSHSLGTSSAFWLSPPLPGEGAAAGATAVGAE
Sbjct: 1   MARSGEQLITFPDYLVGFWKTHVQREGPRSHSLGTSSAFWLSPPLPGEGAAAGATAVGAE 60

Query: 61  RGPAPLGLQDLVHVVQVLLGGQDLGVVAHLPHFALDGFDLPPLEPLLQGGADCGRGRDKK 120
           RGPAPLGLQDLVHVVQVLLGGQDLGVVAHLPHFALDGFDLPPLEPLLQGGADCGRGRDKK
Sbjct: 61  RGPAPLGLQDLVHVVQVLLGGQDLGVVAHLPHFALDGFDLPPLEPLLQGGADCGRGRDKK 120

Query: 121 LSTGCKVPSTQPLH 134
           LSTGCKVPSTQPLH
Sbjct: 121 LSTGCKVPSTQPLH 134


>gi|169213148 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 134

 Score =  280 bits (717), Expect = 2e-76
 Identities = 134/134 (100%), Positives = 134/134 (100%)

Query: 1   MARSGEQLITFPDYLVGFWKTHVQREGPRSHSLGTSSAFWLSPPLPGEGAAAGATAVGAE 60
           MARSGEQLITFPDYLVGFWKTHVQREGPRSHSLGTSSAFWLSPPLPGEGAAAGATAVGAE
Sbjct: 1   MARSGEQLITFPDYLVGFWKTHVQREGPRSHSLGTSSAFWLSPPLPGEGAAAGATAVGAE 60

Query: 61  RGPAPLGLQDLVHVVQVLLGGQDLGVVAHLPHFALDGFDLPPLEPLLQGGADCGRGRDKK 120
           RGPAPLGLQDLVHVVQVLLGGQDLGVVAHLPHFALDGFDLPPLEPLLQGGADCGRGRDKK
Sbjct: 61  RGPAPLGLQDLVHVVQVLLGGQDLGVVAHLPHFALDGFDLPPLEPLLQGGADCGRGRDKK 120

Query: 121 LSTGCKVPSTQPLH 134
           LSTGCKVPSTQPLH
Sbjct: 121 LSTGCKVPSTQPLH 134


>gi|169212812 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 134

 Score =  280 bits (717), Expect = 2e-76
 Identities = 134/134 (100%), Positives = 134/134 (100%)

Query: 1   MARSGEQLITFPDYLVGFWKTHVQREGPRSHSLGTSSAFWLSPPLPGEGAAAGATAVGAE 60
           MARSGEQLITFPDYLVGFWKTHVQREGPRSHSLGTSSAFWLSPPLPGEGAAAGATAVGAE
Sbjct: 1   MARSGEQLITFPDYLVGFWKTHVQREGPRSHSLGTSSAFWLSPPLPGEGAAAGATAVGAE 60

Query: 61  RGPAPLGLQDLVHVVQVLLGGQDLGVVAHLPHFALDGFDLPPLEPLLQGGADCGRGRDKK 120
           RGPAPLGLQDLVHVVQVLLGGQDLGVVAHLPHFALDGFDLPPLEPLLQGGADCGRGRDKK
Sbjct: 61  RGPAPLGLQDLVHVVQVLLGGQDLGVVAHLPHFALDGFDLPPLEPLLQGGADCGRGRDKK 120

Query: 121 LSTGCKVPSTQPLH 134
           LSTGCKVPSTQPLH
Sbjct: 121 LSTGCKVPSTQPLH 134


>gi|89886480 zinedin isoform 2 [Homo sapiens]
          Length = 760

 Score = 31.2 bits (69), Expect = 0.26
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 4/47 (8%)

Query: 34 GTSSAFWLSPPLPGEGAAA----GATAVGAERGPAPLGLQDLVHVVQ 76
          G + A  +S P PG G A     G  + G   GP PL L  ++H +Q
Sbjct: 27 GPTGAAPVSAPAPGPGPAGKGGGGGGSPGPTAGPEPLSLPGILHFIQ 73


>gi|89886477 zinedin isoform 1 [Homo sapiens]
          Length = 753

 Score = 31.2 bits (69), Expect = 0.26
 Identities = 17/47 (36%), Positives = 23/47 (48%), Gaps = 4/47 (8%)

Query: 34 GTSSAFWLSPPLPGEGAAA----GATAVGAERGPAPLGLQDLVHVVQ 76
          G + A  +S P PG G A     G  + G   GP PL L  ++H +Q
Sbjct: 27 GPTGAAPVSAPAPGPGPAGKGGGGGGSPGPTAGPEPLSLPGILHFIQ 73


>gi|239752864 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 386

 Score = 30.4 bits (67), Expect = 0.44
 Identities = 29/91 (31%), Positives = 36/91 (39%), Gaps = 13/91 (14%)

Query: 27  GPRSHSLGTSSAFWLSPPLPGEGAAAGATAVGAERGPAPLGLQDLVHVVQVLLGGQDLGV 86
           GPR+   G  +A W     PG G       V    GP PL +   +H VQ     + L  
Sbjct: 206 GPRA---GVVAASWARDSGPGVGRPVPDLEVAVINGPQPLAI--CLH-VQSPNDQETLET 259

Query: 87  VAHLPHFALDGFDLPPLEPLLQGGADCGRGR 117
           +A LP       +LP  E     G  CG GR
Sbjct: 260 LARLP-------ELPAAELTGHRGGGCGPGR 283


>gi|239747416 PREDICTED: hypothetical protein XP_002346693 [Homo
           sapiens]
          Length = 386

 Score = 30.4 bits (67), Expect = 0.44
 Identities = 29/91 (31%), Positives = 36/91 (39%), Gaps = 13/91 (14%)

Query: 27  GPRSHSLGTSSAFWLSPPLPGEGAAAGATAVGAERGPAPLGLQDLVHVVQVLLGGQDLGV 86
           GPR+   G  +A W     PG G       V    GP PL +   +H VQ     + L  
Sbjct: 206 GPRA---GVVAASWARDSGPGVGRPVPDLEVAVINGPQPLAI--CLH-VQSPNDQETLET 259

Query: 87  VAHLPHFALDGFDLPPLEPLLQGGADCGRGR 117
           +A LP       +LP  E     G  CG GR
Sbjct: 260 LARLP-------ELPAAELTGHRGGGCGPGR 283


>gi|218749883 alpha 1,2-mannosidase [Homo sapiens]
          Length = 699

 Score = 29.6 bits (65), Expect = 0.76
 Identities = 16/40 (40%), Positives = 22/40 (55%)

Query: 26 EGPRSHSLGTSSAFWLSPPLPGEGAAAGATAVGAERGPAP 65
          EG RS +LG+S + +L+PP+ G   A   T V     P P
Sbjct: 5  EGRRSGALGSSQSDFLTPPVGGAPWAVATTVVMYPPPPPP 44


>gi|42733592 hypothetical protein LOC399693 [Homo sapiens]
          Length = 953

 Score = 29.6 bits (65), Expect = 0.76
 Identities = 20/61 (32%), Positives = 25/61 (40%)

Query: 24 QREGPRSHSLGTSSAFWLSPPLPGEGAAAGATAVGAERGPAPLGLQDLVHVVQVLLGGQD 83
          QR+GP SH     +A W +   P   A A    V A R P P    D       ++G  D
Sbjct: 25 QRQGPFSHGAPGRAADWKAVAKPRLCAPAAEDDVAALRWPGPSQQPDPPWAAPHVVGSDD 84

Query: 84 L 84
          L
Sbjct: 85 L 85


>gi|194248077 Kruppel-like factor 4 (gut) [Homo sapiens]
          Length = 479

 Score = 29.3 bits (64), Expect = 0.99
 Identities = 21/67 (31%), Positives = 26/67 (38%), Gaps = 3/67 (4%)

Query: 49  GAAAGATAVGAERGPAPLGLQDLVHVVQVLLGGQDLGVVAHLPHFALDGFDLPPLEPLLQ 108
           G   G    G E  P P    +L  +  V   G   G VA L    LD   +PP +P   
Sbjct: 165 GGTGGGLLYGRESAPPPTAPFNLADINDVSPSG---GFVAELLRPELDPVYIPPQQPQPP 221

Query: 109 GGADCGR 115
           GG   G+
Sbjct: 222 GGGLMGK 228


>gi|239757500 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 407

 Score = 28.9 bits (63), Expect = 1.3
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 4/35 (11%)

Query: 19  WKTHVQREGPRSH----SLGTSSAFWLSPPLPGEG 49
           W T  QR+GP SH    S G      + P +PG G
Sbjct: 150 WATEKQRDGPCSHLAALSRGDGEGVHIQPQIPGYG 184


>gi|239752017 PREDICTED: hypothetical protein XP_002348069 [Homo
           sapiens]
          Length = 363

 Score = 28.9 bits (63), Expect = 1.3
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 4/35 (11%)

Query: 19  WKTHVQREGPRSH----SLGTSSAFWLSPPLPGEG 49
           W T  QR+GP SH    S G      + P +PG G
Sbjct: 140 WATEKQRDGPCSHLAALSRGDGEGVHIQPQIPGYG 174


>gi|10092647 cardiolipin synthase 1 isoform 1 [Homo sapiens]
          Length = 301

 Score = 28.5 bits (62), Expect = 1.7
 Identities = 16/38 (42%), Positives = 18/38 (47%), Gaps = 4/38 (10%)

Query: 27 GPRSHSLGTSSAFWLSPPLPGEGAAAGATAVGAERGPA 64
          G R+H  G   A     P P  GA A A A G + GPA
Sbjct: 64 GQRNHCSGAGKA----APRPAAGAGAAAEAPGGQWGPA 97


>gi|205360947 microtubule associated monoxygenase, calponin and LIM
           domain containing 1 isoform 1 [Homo sapiens]
          Length = 1067

 Score = 28.5 bits (62), Expect = 1.7
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 45  LPGEGAAAGATAVGAERGPAPLGLQDLVHVVQVLLGGQDLGVVAHLPHF 93
           L G GA   ATA   +     LG+  +V    V+ G   LG++A+L HF
Sbjct: 560 LQGLGALE-ATAWALKVAENELGITPVVSAQAVVAGSDPLGLIAYLSHF 607


>gi|226530313 microtubule associated monoxygenase, calponin and LIM
           domain containing 1 isoform 2 [Homo sapiens]
          Length = 981

 Score = 28.5 bits (62), Expect = 1.7
 Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 45  LPGEGAAAGATAVGAERGPAPLGLQDLVHVVQVLLGGQDLGVVAHLPHF 93
           L G GA   ATA   +     LG+  +V    V+ G   LG++A+L HF
Sbjct: 474 LQGLGALE-ATAWALKVAENELGITPVVSAQAVVAGSDPLGLIAYLSHF 521


>gi|239750574 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1297

 Score = 28.1 bits (61), Expect = 2.2
 Identities = 16/36 (44%), Positives = 19/36 (52%)

Query: 72   VHVVQVLLGGQDLGVVAHLPHFALDGFDLPPLEPLL 107
            VH  QVL   Q LG+  HLPH  +    +P L  LL
Sbjct: 1101 VHPRQVLALAQTLGLQVHLPHLTVGERAVPALLLLL 1136


>gi|169205732 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 1297

 Score = 28.1 bits (61), Expect = 2.2
 Identities = 16/36 (44%), Positives = 19/36 (52%)

Query: 72   VHVVQVLLGGQDLGVVAHLPHFALDGFDLPPLEPLL 107
            VH  QVL   Q LG+  HLPH  +    +P L  LL
Sbjct: 1101 VHPRQVLALAQTLGLQVHLPHLTVGERAVPALLLLL 1136


>gi|126116581 retina and anterior neural fold homeobox [Homo
           sapiens]
          Length = 346

 Score = 28.1 bits (61), Expect = 2.2
 Identities = 14/26 (53%), Positives = 15/26 (57%), Gaps = 2/26 (7%)

Query: 27  GPRSHSLGTSSAFWLSPPLPGEGAAA 52
           GP   +L   S  WL PPLPG GA A
Sbjct: 233 GPAGGALPLES--WLGPPLPGGGATA 256


>gi|59938774 cAMP responsive element binding protein 5 isoform beta
           [Homo sapiens]
          Length = 501

 Score = 28.1 bits (61), Expect = 2.2
 Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 11/119 (9%)

Query: 27  GPRSHSLG--------TSSAFWLSPPLPGEGAA-AGATAVGAERGPAPLGLQDLVHVVQV 77
           GP +H L         T+     + P P   +    A +   + GP P  L  L+H+   
Sbjct: 104 GPGTHQLSSARLPNHDTNVVIQQAMPSPQSSSVITQAPSTNRQIGPVPGSLSSLLHLHNR 163

Query: 78  LLGGQDLGVVAHLPHFALDGFD--LPPLEPLLQGGADCGRGRDKKLSTGCKVPSTQPLH 134
                   +   LP+  + G    L P+E  +   +     +   LS  C  P  QP+H
Sbjct: 164 QRQPMPASMPGTLPNPTMPGSSAVLMPMERQMSVNSSIMGMQGPNLSNPCASPQVQPMH 222


>gi|59938772 cAMP responsive element binding protein 5 isoform gamma
           [Homo sapiens]
          Length = 475

 Score = 28.1 bits (61), Expect = 2.2
 Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 11/119 (9%)

Query: 27  GPRSHSLG--------TSSAFWLSPPLPGEGAA-AGATAVGAERGPAPLGLQDLVHVVQV 77
           GP +H L         T+     + P P   +    A +   + GP P  L  L+H+   
Sbjct: 78  GPGTHQLSSARLPNHDTNVVIQQAMPSPQSSSVITQAPSTNRQIGPVPGSLSSLLHLHNR 137

Query: 78  LLGGQDLGVVAHLPHFALDGFD--LPPLEPLLQGGADCGRGRDKKLSTGCKVPSTQPLH 134
                   +   LP+  + G    L P+E  +   +     +   LS  C  P  QP+H
Sbjct: 138 QRQPMPASMPGTLPNPTMPGSSAVLMPMERQMSVNSSIMGMQGPNLSNPCASPQVQPMH 196


>gi|59938770 cAMP responsive element binding protein 5 isoform alpha
           [Homo sapiens]
          Length = 508

 Score = 28.1 bits (61), Expect = 2.2
 Identities = 27/119 (22%), Positives = 43/119 (36%), Gaps = 11/119 (9%)

Query: 27  GPRSHSLG--------TSSAFWLSPPLPGEGAA-AGATAVGAERGPAPLGLQDLVHVVQV 77
           GP +H L         T+     + P P   +    A +   + GP P  L  L+H+   
Sbjct: 111 GPGTHQLSSARLPNHDTNVVIQQAMPSPQSSSVITQAPSTNRQIGPVPGSLSSLLHLHNR 170

Query: 78  LLGGQDLGVVAHLPHFALDGFD--LPPLEPLLQGGADCGRGRDKKLSTGCKVPSTQPLH 134
                   +   LP+  + G    L P+E  +   +     +   LS  C  P  QP+H
Sbjct: 171 QRQPMPASMPGTLPNPTMPGSSAVLMPMERQMSVNSSIMGMQGPNLSNPCASPQVQPMH 229


>gi|71044479 death inducer-obliterator 1 isoform c [Homo sapiens]
          Length = 2240

 Score = 27.7 bits (60), Expect = 2.9
 Identities = 23/81 (28%), Positives = 31/81 (38%), Gaps = 14/81 (17%)

Query: 42   SPPLPGEGAAAGATAVGAERGPAPLGLQDLVHVVQVLLG-------------GQDLGVVA 88
            SP      AAA +TA  +    A      L H++Q L G             G   G+  
Sbjct: 1285 SPATAATTAAAASTAASSTASSASKTASPLEHILQTLFGKKKSFDPSAREPPGSTAGLPQ 1344

Query: 89   HLPHFALDGFDLPP-LEPLLQ 108
                 A DG   PP L+P++Q
Sbjct: 1345 EPKTTAEDGVPAPPLLDPIVQ 1365


>gi|41393606 reticulon 3 isoform d [Homo sapiens]
          Length = 241

 Score = 27.3 bits (59), Expect = 3.8
 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 29 RSHSLGTSSAFWLSPPLPGEGAAAGA-TAVGAERGPAPLGLQDLV 72
          +SHS+ +SS+F   P  PG G + GA  A+G +   +   + DL+
Sbjct: 9  QSHSI-SSSSFGAEPSAPGGGGSPGACPALGTKSCSSSCAVHDLI 52


>gi|5174655 reticulon 3 isoform a [Homo sapiens]
          Length = 236

 Score = 27.3 bits (59), Expect = 3.8
 Identities = 16/45 (35%), Positives = 26/45 (57%), Gaps = 2/45 (4%)

Query: 29 RSHSLGTSSAFWLSPPLPGEGAAAGA-TAVGAERGPAPLGLQDLV 72
          +SHS+ +SS+F   P  PG G + GA  A+G +   +   + DL+
Sbjct: 9  QSHSI-SSSSFGAEPSAPGGGGSPGACPALGTKSCSSSCAVHDLI 52


>gi|27477095 nuclear receptor binding SET domain protein 1 isoform a
            [Homo sapiens]
          Length = 2427

 Score = 27.3 bits (59), Expect = 3.8
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 51   AAGATAVGAERGPAPLGLQ-DLVHVVQVLLGGQDLGVVA 88
            A+G  + GAE+ P PL     LV   + ++GGQ L  +A
Sbjct: 2286 ASGRASAGAEQTPGPLSQSPGLVKQAKQMVGGQQLPALA 2324


>gi|19923586 nuclear receptor binding SET domain protein 1 isoform b
            [Homo sapiens]
          Length = 2696

 Score = 27.3 bits (59), Expect = 3.8
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 51   AAGATAVGAERGPAPLGLQ-DLVHVVQVLLGGQDLGVVA 88
            A+G  + GAE+ P PL     LV   + ++GGQ L  +A
Sbjct: 2555 ASGRASAGAEQTPGPLSQSPGLVKQAKQMVGGQQLPALA 2593


>gi|85068580 homeobox B7 [Homo sapiens]
          Length = 217

 Score = 27.3 bits (59), Expect = 3.8
 Identities = 14/33 (42%), Positives = 19/33 (57%)

Query: 35 TSSAFWLSPPLPGEGAAAGATAVGAERGPAPLG 67
          TS AF  +P  PG GA +GA+   + +G  P G
Sbjct: 30 TSCAFASNPQRPGYGAGSGASFAASMQGLYPGG 62


>gi|20127580 BTB (POZ) domain containing 2 [Homo sapiens]
          Length = 525

 Score = 27.3 bits (59), Expect = 3.8
 Identities = 15/39 (38%), Positives = 17/39 (43%)

Query: 27 GPRSHSLGTSSAFWLSPPLPGEGAAAGATAVGAERGPAP 65
          GP +      SA   + P PG  AAA A A  A   P P
Sbjct: 19 GPGTGGSPGPSANAAATPAPGNAAAAAAAAAAAAAAPGP 57


>gi|197333879 genetic suppressor element 1 isoform 2 [Homo
          sapiens]
          Length = 1113

 Score = 27.3 bits (59), Expect = 3.8
 Identities = 15/52 (28%), Positives = 21/52 (40%)

Query: 17 GFWKTHVQREGPRSHSLGTSSAFWLSPPLPGEGAAAGATAVGAERGPAPLGL 68
          G W++  +++     S G      + PPLP E A   A        P P GL
Sbjct: 30 GVWRSESRQDAGSRSSSGGRERLIVEPPLPQEKAGGPAIPSHLLSTPYPFGL 81



 Score = 26.2 bits (56), Expect = 8.4
 Identities = 26/80 (32%), Positives = 31/80 (38%), Gaps = 7/80 (8%)

Query: 26  EGPRSHSLGTSSAFWLSPPLPGEGAAAGATAVGAERGPAPLGLQDLVHVVQVLLGGQDLG 85
           EGPR         +   PP P EG +          GP P  L +L    Q +LG Q   
Sbjct: 532 EGPRKREPAPLDKYQPPPPPPREGGSLEHQPF--LPGPGPF-LAELEKSTQTILGQQR-- 586

Query: 86  VVAHLPHFALDGFDLPPLEP 105
             A LP  A  G    PL+P
Sbjct: 587 --ASLPQAATFGELSGPLKP 604


>gi|44955926 genetic suppressor element 1 isoform 1 [Homo sapiens]
          Length = 1217

 Score = 27.3 bits (59), Expect = 3.8
 Identities = 15/52 (28%), Positives = 21/52 (40%)

Query: 17  GFWKTHVQREGPRSHSLGTSSAFWLSPPLPGEGAAAGATAVGAERGPAPLGL 68
           G W++  +++     S G      + PPLP E A   A        P P GL
Sbjct: 134 GVWRSESRQDAGSRSSSGGRERLIVEPPLPQEKAGGPAIPSHLLSTPYPFGL 185



 Score = 26.2 bits (56), Expect = 8.4
 Identities = 26/80 (32%), Positives = 31/80 (38%), Gaps = 7/80 (8%)

Query: 26  EGPRSHSLGTSSAFWLSPPLPGEGAAAGATAVGAERGPAPLGLQDLVHVVQVLLGGQDLG 85
           EGPR         +   PP P EG +          GP P  L +L    Q +LG Q   
Sbjct: 636 EGPRKREPAPLDKYQPPPPPPREGGSLEHQPF--LPGPGPF-LAELEKSTQTILGQQR-- 690

Query: 86  VVAHLPHFALDGFDLPPLEP 105
             A LP  A  G    PL+P
Sbjct: 691 --ASLPQAATFGELSGPLKP 708


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.319    0.140    0.444 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,489,895
Number of Sequences: 37866
Number of extensions: 325601
Number of successful extensions: 1274
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 26
Number of HSP's that attempted gapping in prelim test: 1240
Number of HSP's gapped (non-prelim): 58
length of query: 134
length of database: 18,247,518
effective HSP length: 91
effective length of query: 43
effective length of database: 14,801,712
effective search space: 636473616
effective search space used: 636473616
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 56 (26.2 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.