Search of human proteins with 169211178

Search of human proteins with 169211178

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169211178 PREDICTED: hypothetical protein [Homo sapiens]
         (115 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169211178 PREDICTED: hypothetical protein [Homo sapiens]           235   6e-63
gi|169211554 PREDICTED: hypothetical protein [Homo sapiens]           232   4e-62
gi|169211959 PREDICTED: hypothetical protein [Homo sapiens]           232   4e-62
gi|169206224 PREDICTED: hypothetical protein [Homo sapiens]            35   0.013
gi|169206527 PREDICTED: hypothetical protein [Homo sapiens]            35   0.013
gi|113424187 PREDICTED: hypothetical protein [Homo sapiens]            35   0.013
gi|148237270 hypermethylated in cancer 1 isoform 2 [Homo sapiens]      35   0.017
gi|61676186 hypermethylated in cancer 1 isoform 1 [Homo sapiens]       35   0.017
gi|239754597 PREDICTED: hypothetical protein [Homo sapiens]            33   0.037
gi|239749137 PREDICTED: hypothetical protein XP_002346922 [Homo ...    33   0.037
gi|239743209 PREDICTED: hypothetical protein XP_002342803 [Homo ...    33   0.037
gi|239508884 PREDICTED: hypothetical protein [Homo sapiens]            33   0.037
gi|241982780 programmed cell death 6 interacting protein isoform...    33   0.063
gi|22027538 programmed cell death 6 interacting protein isoform ...    33   0.063
gi|239753114 PREDICTED: hypothetical protein [Homo sapiens]            33   0.063
gi|150170729 microtubule associated serine/threonine kinase 3 [H...    32   0.11 
gi|4503489 ephrin-B3 precursor [Homo sapiens]                          32   0.11 
gi|112734870 hypothetical protein LOC57648 [Homo sapiens]              32   0.11 
gi|239757256 PREDICTED: hypothetical protein XP_002345223 [Homo ...    31   0.24 
gi|239751761 PREDICTED: hypothetical protein [Homo sapiens]            31   0.24 
gi|239746261 PREDICTED: hypothetical protein XP_002343718 [Homo ...    31   0.24 
gi|222352122 hypothetical protein LOC284297 [Homo sapiens]             30   0.31 
gi|239754965 PREDICTED: hypothetical protein [Homo sapiens]            30   0.31 
gi|194239681 tubulin tyrosine ligase-like family, member 10 isof...    30   0.31 
gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precurs...    30   0.41 
gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precurs...    30   0.41 
gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]                     30   0.54 
gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]                     30   0.54 
gi|71773010 adaptor-related protein complex 1, gamma 1 subunit i...    30   0.54 
gi|71772942 adaptor-related protein complex 1, gamma 1 subunit i...    30   0.54 

>gi|169211178 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 115

 Score =  235 bits (599), Expect = 6e-63
 Identities = 115/115 (100%), Positives = 115/115 (100%)

Query: 1   MNRSLSQRELRGNALQKRCWYQKSAVFSVISRAEGLPAPHTVSVTGAACSLDPFRKELPP 60
           MNRSLSQRELRGNALQKRCWYQKSAVFSVISRAEGLPAPHTVSVTGAACSLDPFRKELPP
Sbjct: 1   MNRSLSQRELRGNALQKRCWYQKSAVFSVISRAEGLPAPHTVSVTGAACSLDPFRKELPP 60

Query: 61  LSAATDTAPSRAAPCPSTPGAAGRANNKEPPLPLLADLTLQVVLFWDLQQQKTPS 115
           LSAATDTAPSRAAPCPSTPGAAGRANNKEPPLPLLADLTLQVVLFWDLQQQKTPS
Sbjct: 61  LSAATDTAPSRAAPCPSTPGAAGRANNKEPPLPLLADLTLQVVLFWDLQQQKTPS 115


>gi|169211554 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 115

 Score =  232 bits (592), Expect = 4e-62
 Identities = 114/115 (99%), Positives = 114/115 (99%)

Query: 1   MNRSLSQRELRGNALQKRCWYQKSAVFSVISRAEGLPAPHTVSVTGAACSLDPFRKELPP 60
           MNRSLSQRELRGNALQKRCWYQKSAVFSVISRAEGLPAPHTVSVTGAACS DPFRKELPP
Sbjct: 1   MNRSLSQRELRGNALQKRCWYQKSAVFSVISRAEGLPAPHTVSVTGAACSPDPFRKELPP 60

Query: 61  LSAATDTAPSRAAPCPSTPGAAGRANNKEPPLPLLADLTLQVVLFWDLQQQKTPS 115
           LSAATDTAPSRAAPCPSTPGAAGRANNKEPPLPLLADLTLQVVLFWDLQQQKTPS
Sbjct: 61  LSAATDTAPSRAAPCPSTPGAAGRANNKEPPLPLLADLTLQVVLFWDLQQQKTPS 115


>gi|169211959 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 115

 Score =  232 bits (592), Expect = 4e-62
 Identities = 114/115 (99%), Positives = 114/115 (99%)

Query: 1   MNRSLSQRELRGNALQKRCWYQKSAVFSVISRAEGLPAPHTVSVTGAACSLDPFRKELPP 60
           MNRSLSQRELRGNALQKRCWYQKSAVFSVISRAEGLPAPHTVSVTGAACS DPFRKELPP
Sbjct: 1   MNRSLSQRELRGNALQKRCWYQKSAVFSVISRAEGLPAPHTVSVTGAACSPDPFRKELPP 60

Query: 61  LSAATDTAPSRAAPCPSTPGAAGRANNKEPPLPLLADLTLQVVLFWDLQQQKTPS 115
           LSAATDTAPSRAAPCPSTPGAAGRANNKEPPLPLLADLTLQVVLFWDLQQQKTPS
Sbjct: 61  LSAATDTAPSRAAPCPSTPGAAGRANNKEPPLPLLADLTLQVVLFWDLQQQKTPS 115


>gi|169206224 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 318

 Score = 35.0 bits (79), Expect = 0.013
 Identities = 32/101 (31%), Positives = 38/101 (37%), Gaps = 22/101 (21%)

Query: 1   MNRSLSQRELRGNALQKRCWYQKSAVFSVISRAEGLPAPHTVSVTGAACSLDPFRKELPP 60
           +NRS S  +  GN L KR W +   +        G P P      G AC       E+  
Sbjct: 213 INRSTSYMQSHGNCLGKRKWQRLGPL--------GQPGP-----VGCAC-------EVSS 252

Query: 61  LSAATDTAPSRAAPCPSTPGAAGRANNKEPPL--PLLADLT 99
             A    A  R  PC S P A G  +     L  PL A LT
Sbjct: 253 SGAGPAAAVDRGGPCTSAPAAPGNLSPDSRLLQNPLPAHLT 293


>gi|169206527 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 318

 Score = 35.0 bits (79), Expect = 0.013
 Identities = 32/101 (31%), Positives = 38/101 (37%), Gaps = 22/101 (21%)

Query: 1   MNRSLSQRELRGNALQKRCWYQKSAVFSVISRAEGLPAPHTVSVTGAACSLDPFRKELPP 60
           +NRS S  +  GN L KR W +   +        G P P      G AC       E+  
Sbjct: 213 INRSTSYMQSHGNCLGKRKWQRLGPL--------GQPGP-----VGCAC-------EVSS 252

Query: 61  LSAATDTAPSRAAPCPSTPGAAGRANNKEPPL--PLLADLT 99
             A    A  R  PC S P A G  +     L  PL A LT
Sbjct: 253 SGAGPAAAVDRGGPCTSAPAAPGNLSPDSRLLQNPLPAHLT 293


>gi|113424187 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 268

 Score = 35.0 bits (79), Expect = 0.013
 Identities = 32/101 (31%), Positives = 38/101 (37%), Gaps = 22/101 (21%)

Query: 1   MNRSLSQRELRGNALQKRCWYQKSAVFSVISRAEGLPAPHTVSVTGAACSLDPFRKELPP 60
           +NRS S  +  GN L KR W +   +        G P P      G AC       E+  
Sbjct: 163 INRSTSYMQSHGNCLGKRKWQRLGPL--------GQPGP-----VGCAC-------EVSS 202

Query: 61  LSAATDTAPSRAAPCPSTPGAAGRANNKEPPL--PLLADLT 99
             A    A  R  PC S P A G  +     L  PL A LT
Sbjct: 203 SGAGPAAAVDRGGPCTSAPAAPGNLSPDSRLLQNPLPAHLT 243


>gi|148237270 hypermethylated in cancer 1 isoform 2 [Homo sapiens]
          Length = 733

 Score = 34.7 bits (78), Expect = 0.017
 Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 6/69 (8%)

Query: 49  CSLDPFRKELPPLSAATDT--APSRAAPCPSTPGAAGRANNKEPPLPLLADLTLQVVLFW 106
           C LD   K+ PP SAA +   A     P P +P +AG A  KEPPL L    +L  + F 
Sbjct: 240 CGLD-LSKKSPPGSAAPERPLAERELPPRPDSPPSAGPAAYKEPPLAL---PSLPPLPFQ 295

Query: 107 DLQQQKTPS 115
            L++   PS
Sbjct: 296 KLEEAAPPS 304


>gi|61676186 hypermethylated in cancer 1 isoform 1 [Homo sapiens]
          Length = 714

 Score = 34.7 bits (78), Expect = 0.017
 Identities = 27/69 (39%), Positives = 35/69 (50%), Gaps = 6/69 (8%)

Query: 49  CSLDPFRKELPPLSAATDT--APSRAAPCPSTPGAAGRANNKEPPLPLLADLTLQVVLFW 106
           C LD   K+ PP SAA +   A     P P +P +AG A  KEPPL L    +L  + F 
Sbjct: 221 CGLD-LSKKSPPGSAAPERPLAERELPPRPDSPPSAGPAAYKEPPLAL---PSLPPLPFQ 276

Query: 107 DLQQQKTPS 115
            L++   PS
Sbjct: 277 KLEEAAPPS 285


>gi|239754597 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 170

 Score = 33.5 bits (75), Expect = 0.037
 Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 12  GNALQKRCWYQKSAVFSVISRAEGLPAPHTVSVTGAACSLDPFRK---ELPPLSAATDTA 68
           G   Q R    +SA    +S   G P+P +      +C    FR    + PP + AT  +
Sbjct: 55  GRRFQNRPRLLRSAAAPPLSHLAGTPSPASRIALSLSCQASQFRTAWHQEPPGAGATQRS 114

Query: 69  PSRAAPCPSTPGAAGRANNKEP 90
           P+   P  + P    R    EP
Sbjct: 115 PATWRPARTQPPGGVRPREPEP 136


>gi|239749137 PREDICTED: hypothetical protein XP_002346922 [Homo
           sapiens]
          Length = 170

 Score = 33.5 bits (75), Expect = 0.037
 Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 12  GNALQKRCWYQKSAVFSVISRAEGLPAPHTVSVTGAACSLDPFRK---ELPPLSAATDTA 68
           G   Q R    +SA    +S   G P+P +      +C    FR    + PP + AT  +
Sbjct: 55  GRRFQNRPRLLRSAAAPPLSHLAGTPSPASRIALSLSCQASQFRTAWHQEPPGAGATQRS 114

Query: 69  PSRAAPCPSTPGAAGRANNKEP 90
           P+   P  + P    R    EP
Sbjct: 115 PATWRPARTQPPGGVRPREPEP 136


>gi|239743209 PREDICTED: hypothetical protein XP_002342803 [Homo
           sapiens]
          Length = 170

 Score = 33.5 bits (75), Expect = 0.037
 Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 12  GNALQKRCWYQKSAVFSVISRAEGLPAPHTVSVTGAACSLDPFRK---ELPPLSAATDTA 68
           G   Q R    +SA    +S   G P+P +      +C    FR    + PP + AT  +
Sbjct: 55  GRRFQNRPRLLRSAAAPPLSHLAGTPSPASRIALSLSCQASQFRTAWHQEPPGAGATQRS 114

Query: 69  PSRAAPCPSTPGAAGRANNKEP 90
           P+   P  + P    R    EP
Sbjct: 115 PATWRPARTQPPGGVRPREPEP 136


>gi|239508884 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 170

 Score = 33.5 bits (75), Expect = 0.037
 Identities = 22/82 (26%), Positives = 32/82 (39%), Gaps = 3/82 (3%)

Query: 12  GNALQKRCWYQKSAVFSVISRAEGLPAPHTVSVTGAACSLDPFRK---ELPPLSAATDTA 68
           G   Q R    +SA    +S   G P+P +      +C    FR    + PP + AT  +
Sbjct: 55  GRRFQNRPRLLRSAAAPPLSHLAGTPSPASRIALSLSCQASQFRTAWHQEPPGAGATQRS 114

Query: 69  PSRAAPCPSTPGAAGRANNKEP 90
           P+   P  + P    R    EP
Sbjct: 115 PATWRPARTQPPGGVRPREPEP 136


>gi|241982780 programmed cell death 6 interacting protein isoform 2
           [Homo sapiens]
          Length = 873

 Score = 32.7 bits (73), Expect = 0.063
 Identities = 25/63 (39%), Positives = 29/63 (46%), Gaps = 6/63 (9%)

Query: 37  PAPHTVSVTGAACSLDPFRKELPPLSAATDTAPS-----RAAPCPS-TPGAAGRANNKEP 90
           PAP T+  T       P    LP   A + TAPS      AAP PS TPG+A     + P
Sbjct: 747 PAPRTMPPTKPQPPARPPPPVLPANRAPSATAPSPVGAGTAAPAPSQTPGSAPPPQAQGP 806

Query: 91  PLP 93
           P P
Sbjct: 807 PYP 809


>gi|22027538 programmed cell death 6 interacting protein isoform 1
           [Homo sapiens]
          Length = 868

 Score = 32.7 bits (73), Expect = 0.063
 Identities = 25/63 (39%), Positives = 29/63 (46%), Gaps = 6/63 (9%)

Query: 37  PAPHTVSVTGAACSLDPFRKELPPLSAATDTAPS-----RAAPCPS-TPGAAGRANNKEP 90
           PAP T+  T       P    LP   A + TAPS      AAP PS TPG+A     + P
Sbjct: 742 PAPRTMPPTKPQPPARPPPPVLPANRAPSATAPSPVGAGTAAPAPSQTPGSAPPPQAQGP 801

Query: 91  PLP 93
           P P
Sbjct: 802 PYP 804


>gi|239753114 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 322

 Score = 32.7 bits (73), Expect = 0.063
 Identities = 18/41 (43%), Positives = 23/41 (56%), Gaps = 1/41 (2%)

Query: 59  PPLSAATDTAPSRAAPCPS-TPGAAGRANNKEPPLPLLADL 98
           PP + AT +A SR  P P+  P  A  A+   PPLP+L  L
Sbjct: 183 PPAAPATGSAQSRPRPAPARAPLIAPGAHQSAPPLPVLGRL 223


>gi|150170729 microtubule associated serine/threonine kinase 3 [Homo
            sapiens]
          Length = 1309

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 19/67 (28%), Positives = 32/67 (47%), Gaps = 2/67 (2%)

Query: 24   SAVFSVISRAEGLPAPHTVSVTGAACSLDPFRKELPPLSAATDTAPSRAAPCPSTPGAAG 83
            S +   +S +E LP   T S++ +  +  P R   P + A T  +P  A+P  S+P +  
Sbjct: 1094 SGLHHSLSSSESLPGSPTHSLSPSPTT--PCRSPAPDVPADTTASPPSASPSSSSPASPA 1151

Query: 84   RANNKEP 90
             A +  P
Sbjct: 1152 AAGHTRP 1158


>gi|4503489 ephrin-B3 precursor [Homo sapiens]
          Length = 340

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 19/42 (45%), Positives = 22/42 (52%), Gaps = 2/42 (4%)

Query: 46  GAACSLDPFRKELP--PLSAATDTAPSRAAPCPSTPGAAGRA 85
           GAA SL+P ++ LP  P S AT        P PS P  AG A
Sbjct: 191 GAAHSLEPGKENLPGDPTSNATSRGAEGPLPPPSMPAVAGAA 232


>gi|112734870 hypothetical protein LOC57648 [Homo sapiens]
          Length = 1094

 Score = 32.0 bits (71), Expect = 0.11
 Identities = 24/70 (34%), Positives = 29/70 (41%), Gaps = 2/70 (2%)

Query: 23  KSAVFSVISRAEGLPA--PHTVSVTGAACSLDPFRKELPPLSAATDTAPSRAAPCPSTPG 80
           + A FSV S     P+  P  VS   A+ S     +  PP S     AP   AP  S PG
Sbjct: 791 EEAFFSVASPEPAGPSGSPELVSSPAASSSSATALQIQPPGSPDPPPAPPAPAPASSAPG 850

Query: 81  AAGRANNKEP 90
              +   KEP
Sbjct: 851 HVAKLPQKEP 860


>gi|239757256 PREDICTED: hypothetical protein XP_002345223 [Homo
           sapiens]
          Length = 113

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 16/43 (37%), Positives = 23/43 (53%)

Query: 59  PPLSAATDTAPSRAAPCPSTPGAAGRANNKEPPLPLLADLTLQ 101
           PP SA+ D++P    P PS   +A  A  K  P P ++ L L+
Sbjct: 66  PPGSASLDSSPGTELPVPSLASSAPLAPTKPHPRPRVSRLRLR 108


>gi|239751761 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 113

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 16/43 (37%), Positives = 23/43 (53%)

Query: 59  PPLSAATDTAPSRAAPCPSTPGAAGRANNKEPPLPLLADLTLQ 101
           PP SA+ D++P    P PS   +A  A  K  P P ++ L L+
Sbjct: 66  PPGSASLDSSPGTELPVPSLASSAPLAPTKPHPRPRVSRLRLR 108


>gi|239746261 PREDICTED: hypothetical protein XP_002343718 [Homo
           sapiens]
          Length = 113

 Score = 30.8 bits (68), Expect = 0.24
 Identities = 16/43 (37%), Positives = 23/43 (53%)

Query: 59  PPLSAATDTAPSRAAPCPSTPGAAGRANNKEPPLPLLADLTLQ 101
           PP SA+ D++P    P PS   +A  A  K  P P ++ L L+
Sbjct: 66  PPGSASLDSSPGTELPVPSLASSAPLAPTKPHPRPRVSRLRLR 108


>gi|222352122 hypothetical protein LOC284297 [Homo sapiens]
          Length = 1573

 Score = 30.4 bits (67), Expect = 0.31
 Identities = 21/50 (42%), Positives = 27/50 (54%), Gaps = 2/50 (4%)

Query: 38   APHTVSVTGAACS-LDPFRKELPPLSAATDTAPSRAAPCPS-TPGAAGRA 85
            +P T+ V G   S   P+ +  PP  AAT TAP   +P PS +PG  G A
Sbjct: 972  SPPTLRVHGDTGSPRKPWPERRPPRPAATRTAPPTPSPGPSASPGPPGPA 1021


>gi|239754965 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 213

 Score = 30.4 bits (67), Expect = 0.31
 Identities = 23/57 (40%), Positives = 27/57 (47%), Gaps = 6/57 (10%)

Query: 38  APHTVSVTGAACS-LDPFRKELPPLSAATDTAPSRAAPCPSTPGAAGRANNKEPPLP 93
           AP TV+ T   C  L    K  PP +AA +   +R    P TPGA G A  K P  P
Sbjct: 121 APDTVAATSGVCGELRDSAKRSPPRAAAGEGGWARP---PPTPGAQGPA--KPPRFP 172


>gi|194239681 tubulin tyrosine ligase-like family, member 10 isoform
           1 [Homo sapiens]
          Length = 673

 Score = 30.4 bits (67), Expect = 0.31
 Identities = 27/86 (31%), Positives = 33/86 (38%), Gaps = 13/86 (15%)

Query: 7   QRELRGNALQKRCWYQKSAVFSVISRAEGLPAPHTVSVTGAACSLDPFRKELPPLSAATD 66
           ++ LRG   QK         F ++   E  P PH     G +CSL    +  PPL   T 
Sbjct: 545 RKSLRG---QKMLPLLSQRRFVLLHNGEADPRPHL----GGSCSL----RRWPPLP--TR 591

Query: 67  TAPSRAAPCPSTPGAAGRANNKEPPL 92
            A S   P P  P   G      PPL
Sbjct: 592 QAKSSGPPMPHAPDQPGARRPAPPPL 617


>gi|14196468 protocadherin gamma subfamily A, 4 isoform 2 precursor
           [Homo sapiens]
          Length = 820

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 15/45 (33%), Positives = 23/45 (51%)

Query: 14  ALQKRCWYQKSAVFSVISRAEGLPAPHTVSVTGAACSLDPFRKEL 58
           AL+ R W++   + +  SR  G+PA H V V G    L  +  E+
Sbjct: 713 ALKLRRWHKSRLLHAEGSRLAGVPASHFVGVDGVRAFLQTYSHEV 757


>gi|11056026 protocadherin gamma subfamily A, 4 isoform 1 precursor
           [Homo sapiens]
          Length = 931

 Score = 30.0 bits (66), Expect = 0.41
 Identities = 15/45 (33%), Positives = 23/45 (51%)

Query: 14  ALQKRCWYQKSAVFSVISRAEGLPAPHTVSVTGAACSLDPFRKEL 58
           AL+ R W++   + +  SR  G+PA H V V G    L  +  E+
Sbjct: 713 ALKLRRWHKSRLLHAEGSRLAGVPASHFVGVDGVRAFLQTYSHEV 757


>gi|119395760 diaphanous 1 isoform 2 [Homo sapiens]
          Length = 1263

 Score = 29.6 bits (65), Expect = 0.54
 Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 3/52 (5%)

Query: 51  LDPFRKELPPLSAATDTAPSRA---APCPSTPGAAGRANNKEPPLPLLADLT 99
           L+  +KE+  LSAA  T P      AP P  P   G +    PP P   D T
Sbjct: 546 LEDAKKEMASLSAAAITVPPSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDST 597


>gi|119395758 diaphanous 1 isoform 1 [Homo sapiens]
          Length = 1272

 Score = 29.6 bits (65), Expect = 0.54
 Identities = 19/52 (36%), Positives = 23/52 (44%), Gaps = 3/52 (5%)

Query: 51  LDPFRKELPPLSAATDTAPSRA---APCPSTPGAAGRANNKEPPLPLLADLT 99
           L+  +KE+  LSAA  T P      AP P  P   G +    PP P   D T
Sbjct: 555 LEDAKKEMASLSAAAITVPPSVPSRAPVPPAPPLPGDSGTIIPPPPAPGDST 606


>gi|71773010 adaptor-related protein complex 1, gamma 1 subunit
           isoform a [Homo sapiens]
          Length = 825

 Score = 29.6 bits (65), Expect = 0.54
 Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 14/83 (16%)

Query: 5   LSQRELRGNALQKRCWYQKSAVFSVISRAEGLPAPHTVSVTGAACSLDPFRKELPPLSAA 64
           L QR +  NAL K+  + +SA+       E +P    V+  G          E+   +  
Sbjct: 562 LQQRAVEYNALFKKYDHMRSALL------ERMPVMEKVTTNGPT--------EIVQTNGE 607

Query: 65  TDTAPSRAAPCPSTPGAAGRANN 87
           T+ AP    P PS P    +AN+
Sbjct: 608 TEPAPLETKPPPSGPQPTSQAND 630


>gi|71772942 adaptor-related protein complex 1, gamma 1 subunit
           isoform b [Homo sapiens]
          Length = 822

 Score = 29.6 bits (65), Expect = 0.54
 Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 14/83 (16%)

Query: 5   LSQRELRGNALQKRCWYQKSAVFSVISRAEGLPAPHTVSVTGAACSLDPFRKELPPLSAA 64
           L QR +  NAL K+  + +SA+       E +P    V+  G          E+   +  
Sbjct: 559 LQQRAVEYNALFKKYDHMRSALL------ERMPVMEKVTTNGPT--------EIVQTNGE 604

Query: 65  TDTAPSRAAPCPSTPGAAGRANN 87
           T+ AP    P PS P    +AN+
Sbjct: 605 TEPAPLETKPPPSGPQPTSQAND 627


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.128    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,975,274
Number of Sequences: 37866
Number of extensions: 245780
Number of successful extensions: 2030
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 71
Number of HSP's successfully gapped in prelim test: 116
Number of HSP's that attempted gapping in prelim test: 1835
Number of HSP's gapped (non-prelim): 305
length of query: 115
length of database: 18,247,518
effective HSP length: 85
effective length of query: 30
effective length of database: 15,028,908
effective search space: 450867240
effective search space used: 450867240
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.