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Search of human proteins with 169210212
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169210212 PREDICTED: hypothetical protein [Homo sapiens]
(204 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169210212 PREDICTED: hypothetical protein [Homo sapiens] 432 e-121
gi|169210418 PREDICTED: hypothetical protein [Homo sapiens] 432 e-121
gi|169209848 PREDICTED: hypothetical protein [Homo sapiens] 432 e-121
gi|239757552 PREDICTED: similar to hCG2006635, partial [Homo sap... 42 4e-04
gi|239753418 PREDICTED: similar to hCG2012845 [Homo sapiens] 40 0.002
gi|154146231 DMRT-like family A2 [Homo sapiens] 35 0.034
gi|239754072 PREDICTED: hypothetical protein [Homo sapiens] 35 0.044
gi|169202233 PREDICTED: hypothetical protein [Homo sapiens] 35 0.044
gi|110832843 TBP-associated factor 4 [Homo sapiens] 35 0.044
gi|148233642 hypothetical protein LOC283897 [Homo sapiens] 35 0.044
gi|22749289 hypothetical protein LOC170062 [Homo sapiens] 34 0.098
gi|169206080 PREDICTED: hypothetical protein LOC100132234 [Homo ... 33 0.13
gi|169206459 PREDICTED: hypothetical protein LOC100132234 [Homo ... 33 0.13
gi|169164483 PREDICTED: hypothetical protein [Homo sapiens] 33 0.17
gi|239749023 PREDICTED: hypothetical protein XP_002346884 [Homo ... 33 0.17
gi|113414226 PREDICTED: hypothetical protein [Homo sapiens] 33 0.17
gi|169205915 PREDICTED: hypothetical protein LOC100132234 [Homo ... 33 0.17
gi|239743042 PREDICTED: hypothetical protein XP_002342725 [Homo ... 33 0.17
gi|113413437 PREDICTED: hypothetical protein [Homo sapiens] 33 0.17
gi|7706469 Kruppel-like factor [Homo sapiens] 33 0.17
gi|115511036 alpha-kinase 3 [Homo sapiens] 33 0.17
gi|38569475 metaxin 1 isoform 1 [Homo sapiens] 33 0.22
gi|38569477 metaxin 1 isoform 2 [Homo sapiens] 33 0.22
gi|239741731 PREDICTED: hypothetical protein XP_002342307 [Homo ... 33 0.22
gi|84626580 hypothetical protein LOC80178 [Homo sapiens] 33 0.22
gi|61966741 TMF regulated nuclear protein [Homo sapiens] 32 0.29
gi|89886475 hypothetical protein LOC163183 [Homo sapiens] 32 0.29
gi|169214061 PREDICTED: hypothetical protein [Homo sapiens] 32 0.37
gi|169214437 PREDICTED: hypothetical protein [Homo sapiens] 32 0.37
gi|239749631 PREDICTED: hypothetical protein [Homo sapiens] 32 0.37
>gi|169210212 PREDICTED: hypothetical protein [Homo sapiens]
Length = 204
Score = 432 bits (1110), Expect = e-121
Identities = 204/204 (100%), Positives = 204/204 (100%)
Query: 1 MRAHVAQHVSGELGAVGLQVEADQLVGEVQGVHGQQRAPRDAPVALAQRHRQQLQLELLE 60
MRAHVAQHVSGELGAVGLQVEADQLVGEVQGVHGQQRAPRDAPVALAQRHRQQLQLELLE
Sbjct: 1 MRAHVAQHVSGELGAVGLQVEADQLVGEVQGVHGQQRAPRDAPVALAQRHRQQLQLELLE 60
Query: 61 LLGGQVLQRIQDGVARAPHGSRIPGRCRRSPRCSRRPGGSRLRGGTWTPRLPPTLVSRLP 120
LLGGQVLQRIQDGVARAPHGSRIPGRCRRSPRCSRRPGGSRLRGGTWTPRLPPTLVSRLP
Sbjct: 61 LLGGQVLQRIQDGVARAPHGSRIPGRCRRSPRCSRRPGGSRLRGGTWTPRLPPTLVSRLP 120
Query: 121 APVRCPPAKGASLLHPWSPPTQASGLGPQAVGGRQDRALQLACEVGPGRGPQRGSWVAPA 180
APVRCPPAKGASLLHPWSPPTQASGLGPQAVGGRQDRALQLACEVGPGRGPQRGSWVAPA
Sbjct: 121 APVRCPPAKGASLLHPWSPPTQASGLGPQAVGGRQDRALQLACEVGPGRGPQRGSWVAPA 180
Query: 181 CLWACTSGYRPETWAGSHWVYWST 204
CLWACTSGYRPETWAGSHWVYWST
Sbjct: 181 CLWACTSGYRPETWAGSHWVYWST 204
>gi|169210418 PREDICTED: hypothetical protein [Homo sapiens]
Length = 204
Score = 432 bits (1110), Expect = e-121
Identities = 204/204 (100%), Positives = 204/204 (100%)
Query: 1 MRAHVAQHVSGELGAVGLQVEADQLVGEVQGVHGQQRAPRDAPVALAQRHRQQLQLELLE 60
MRAHVAQHVSGELGAVGLQVEADQLVGEVQGVHGQQRAPRDAPVALAQRHRQQLQLELLE
Sbjct: 1 MRAHVAQHVSGELGAVGLQVEADQLVGEVQGVHGQQRAPRDAPVALAQRHRQQLQLELLE 60
Query: 61 LLGGQVLQRIQDGVARAPHGSRIPGRCRRSPRCSRRPGGSRLRGGTWTPRLPPTLVSRLP 120
LLGGQVLQRIQDGVARAPHGSRIPGRCRRSPRCSRRPGGSRLRGGTWTPRLPPTLVSRLP
Sbjct: 61 LLGGQVLQRIQDGVARAPHGSRIPGRCRRSPRCSRRPGGSRLRGGTWTPRLPPTLVSRLP 120
Query: 121 APVRCPPAKGASLLHPWSPPTQASGLGPQAVGGRQDRALQLACEVGPGRGPQRGSWVAPA 180
APVRCPPAKGASLLHPWSPPTQASGLGPQAVGGRQDRALQLACEVGPGRGPQRGSWVAPA
Sbjct: 121 APVRCPPAKGASLLHPWSPPTQASGLGPQAVGGRQDRALQLACEVGPGRGPQRGSWVAPA 180
Query: 181 CLWACTSGYRPETWAGSHWVYWST 204
CLWACTSGYRPETWAGSHWVYWST
Sbjct: 181 CLWACTSGYRPETWAGSHWVYWST 204
>gi|169209848 PREDICTED: hypothetical protein [Homo sapiens]
Length = 204
Score = 432 bits (1110), Expect = e-121
Identities = 204/204 (100%), Positives = 204/204 (100%)
Query: 1 MRAHVAQHVSGELGAVGLQVEADQLVGEVQGVHGQQRAPRDAPVALAQRHRQQLQLELLE 60
MRAHVAQHVSGELGAVGLQVEADQLVGEVQGVHGQQRAPRDAPVALAQRHRQQLQLELLE
Sbjct: 1 MRAHVAQHVSGELGAVGLQVEADQLVGEVQGVHGQQRAPRDAPVALAQRHRQQLQLELLE 60
Query: 61 LLGGQVLQRIQDGVARAPHGSRIPGRCRRSPRCSRRPGGSRLRGGTWTPRLPPTLVSRLP 120
LLGGQVLQRIQDGVARAPHGSRIPGRCRRSPRCSRRPGGSRLRGGTWTPRLPPTLVSRLP
Sbjct: 61 LLGGQVLQRIQDGVARAPHGSRIPGRCRRSPRCSRRPGGSRLRGGTWTPRLPPTLVSRLP 120
Query: 121 APVRCPPAKGASLLHPWSPPTQASGLGPQAVGGRQDRALQLACEVGPGRGPQRGSWVAPA 180
APVRCPPAKGASLLHPWSPPTQASGLGPQAVGGRQDRALQLACEVGPGRGPQRGSWVAPA
Sbjct: 121 APVRCPPAKGASLLHPWSPPTQASGLGPQAVGGRQDRALQLACEVGPGRGPQRGSWVAPA 180
Query: 181 CLWACTSGYRPETWAGSHWVYWST 204
CLWACTSGYRPETWAGSHWVYWST
Sbjct: 181 CLWACTSGYRPETWAGSHWVYWST 204
>gi|239757552 PREDICTED: similar to hCG2006635, partial [Homo
sapiens]
Length = 304
Score = 42.0 bits (97), Expect = 4e-04
Identities = 40/132 (30%), Positives = 53/132 (40%), Gaps = 20/132 (15%)
Query: 63 GGQVLQRIQDGVARAPHGSRIPG-RCRRSPRCSRRPGGSRLRGGT------------WTP 109
GG + Q + + A HG + RC+R PR SR GG + T WT
Sbjct: 118 GGNLPQSL---ILAAIHGPEVASLRCQRGPRKSRAQGGRAVHSATLSGLGPALQPPPWTQ 174
Query: 110 -RLPPTLVSRLPA--PVRCPPAKGASLLHPWSPPTQASGLGPQ-AVGGRQDRALQLACEV 165
+LPP +R P CP + L P + G+GPQ GG + A
Sbjct: 175 VQLPPEHGTRQRGLQPGPCPCQQQGGYLGQKLPGRLSEGVGPQLQEGGNRRSARPWRLHG 234
Query: 166 GPGRGPQRGSWV 177
+GP GSWV
Sbjct: 235 AQYQGPAPGSWV 246
>gi|239753418 PREDICTED: similar to hCG2012845 [Homo sapiens]
Length = 195
Score = 39.7 bits (91), Expect = 0.002
Identities = 49/138 (35%), Positives = 59/138 (42%), Gaps = 34/138 (24%)
Query: 14 GAVGL--QVEADQLVGEVQGVHGQQRAPRDA-----PVALAQRHRQQLQLELLEL----- 61
GA GL + A+ LVGE R+P A P A +RH QQ Q + E
Sbjct: 76 GAQGLLGHIGAELLVGERHEF--AWRSPAAAHHPTRPAAPCRRHHQQQQQDQAEARRRER 133
Query: 62 LGGQVLQRIQDGVARAPHGSRIPGRCRRSPRCSRRPGGSRLRGGTWTPRLPPTLVSRLPA 121
GG GV AP GSR R R R + R GG+++RGG P L
Sbjct: 134 CGGS-------GVRVAPGGSR---RGRHGRRGAARAGGTQVRGGGPGPEL---------V 174
Query: 122 PVRCPPAKGASLLHPWSP 139
RCPP + S L P SP
Sbjct: 175 AARCPPRRLDSEL-PGSP 191
>gi|154146231 DMRT-like family A2 [Homo sapiens]
Length = 542
Score = 35.4 bits (80), Expect = 0.034
Identities = 38/152 (25%), Positives = 56/152 (36%), Gaps = 20/152 (13%)
Query: 21 EADQLVGEVQGVHG-------QQRAPRDAPVALAQRHRQQLQLELLELLGGQVLQRIQDG 73
EAD+ GE G +QR P D + HR+ + +L+ GG V+Q I+
Sbjct: 291 EADKEEGEAAPAPGLGGGSGPRQRTPLDILTRVFPGHRRGVLELVLQGCGGDVVQAIEQ- 349
Query: 74 VARAPHGSRIPGRCRRSPRCSRRPGGSRLRGGTWTPRLPPTLVSR-------LPAPVRCP 126
V G G +P G + W R+ + LPAP++
Sbjct: 350 VLNHHRGGLAAGLGPAAPPDKAAVGAAAAADDAWPSRVDAAAAAAAAAGGPGLPAPLQAG 409
Query: 127 PAKGASLLHPWSPPTQASGLGPQAVGGRQDRA 158
PA P P A + P A+G R+
Sbjct: 410 PA-----APPHHRPLLAGAMAPGALGSLSSRS 436
>gi|239754072 PREDICTED: hypothetical protein [Homo sapiens]
Length = 379
Score = 35.0 bits (79), Expect = 0.044
Identities = 31/104 (29%), Positives = 40/104 (38%), Gaps = 11/104 (10%)
Query: 91 PRCSRRPGGSRLRGGTWTPRLPPTLVSRLPAPVRCPPAKGASLLHPWSPPTQASGLG--- 147
P S+ PG ++ R+ S PAP PP SLL P P+ G G
Sbjct: 214 PAISQSPGAMQIISSVLQTRVSLCGCSGHPAPASFPPLPSPSLLRP--RPSSCRGRGQCW 271
Query: 148 -PQAVGGRQDRALQL-----ACEVGPGRGPQRGSWVAPACLWAC 185
P A R +L L A + PGR G V A + +C
Sbjct: 272 VPHAYSDRSSSSLHLLPPPAASSLFPGRARAPGRAVLRALVLSC 315
>gi|169202233 PREDICTED: hypothetical protein [Homo sapiens]
Length = 381
Score = 35.0 bits (79), Expect = 0.044
Identities = 41/128 (32%), Positives = 48/128 (37%), Gaps = 16/128 (12%)
Query: 48 QRHRQQLQLELLELLGGQVL-QRIQDGVARAPHGSRIPGRCRRSPRCSRRPGGS------ 100
QR +QLQ G Q L + DGV HGSR GR + R P +
Sbjct: 240 QRQVEQLQHRHQHERGQQQLVEGAPDGVGHL-HGSRGSGRAATTTRPQTTPAAASPDLPQ 298
Query: 101 ---RLRGGTWT--PRLPPTLVSRLPAPVRCPPAKGASLLHPWSPPTQASGLGPQAVGGRQ 155
R RG PR PP PA R PPA S SPPT+ P+ R
Sbjct: 299 PAERSRGEPRPAEPRAPPRPP---PAARRPPPATAPSPRRAGSPPTREEEPRPRRSAARP 355
Query: 156 DRALQLAC 163
+Q C
Sbjct: 356 QCPVQCEC 363
>gi|110832843 TBP-associated factor 4 [Homo sapiens]
Length = 1085
Score = 35.0 bits (79), Expect = 0.044
Identities = 39/116 (33%), Positives = 43/116 (37%), Gaps = 12/116 (10%)
Query: 73 GVARAPHGSRIPGRCRRSPRCSR-RPGGSR-LRGGTWTPRLPPTLVSRLPAP----VRCP 126
G A PG P R RPGG R G +PR P LV PAP +R P
Sbjct: 72 GAGPAAPAEGAPGAAPEPPPAGRARPGGGGPQRPGPPSPRRP--LVPAGPAPPAAKLRPP 129
Query: 127 PAKGASLLHPWSPPTQASGLGPQ---AVGGRQDRALQLACEVGPGRGPQRGSWVAP 179
P A P P A GP+ A + LA GPG GP G P
Sbjct: 130 PEGSAGSCAP-VPAAAAVAAGPEPAPAGPAKPAGPAALAARAGPGPGPGPGPGPGP 184
>gi|148233642 hypothetical protein LOC283897 [Homo sapiens]
Length = 224
Score = 35.0 bits (79), Expect = 0.044
Identities = 37/117 (31%), Positives = 43/117 (36%), Gaps = 28/117 (23%)
Query: 84 PGRCRRSPRCSRRPGG---------SRLRGGTW----TPRL------PPTLVSRLPAPVR 124
P R+P RPGG +R R W P L PPT V L A
Sbjct: 63 PDPSHRAPTLVWRPGGELWIEPMGTARERSEDWYGSAVPLLTDRAPEPPTQVGTLEARAT 122
Query: 125 CPPAKGASLLHPWSPPTQASGLGPQAVGGRQDRALQLACEVGPGRGPQRG--SWVAP 179
PPA P +P + S LGPQ V R+ + GR P G SW P
Sbjct: 123 APPA-------PSAPNSAPSNLGPQTVLEVPARSTFWGPQPWEGRPPATGLVSWAEP 172
>gi|22749289 hypothetical protein LOC170062 [Homo sapiens]
Length = 645
Score = 33.9 bits (76), Expect = 0.098
Identities = 26/78 (33%), Positives = 34/78 (43%), Gaps = 9/78 (11%)
Query: 81 SRIPGRCRRSPRCSRRPGGSRLRGGTWTPRLPPTLVSRL-PAPVRC--------PPAKGA 131
SR+ + ++P SRRP + R + P P T VS L P P PP G
Sbjct: 197 SRLRPQLPKTPVSSRRPEPPKTRAPSLRPEPPKTRVSSLHPEPPETRASHLRVDPPETGV 256
Query: 132 SLLHPWSPPTQASGLGPQ 149
S L P P T S + P+
Sbjct: 257 SHLCPEPPKTLVSSVHPE 274
>gi|169206080 PREDICTED: hypothetical protein LOC100132234 [Homo
sapiens]
Length = 202
Score = 33.5 bits (75), Expect = 0.13
Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 5/94 (5%)
Query: 74 VARAPHGSRIPGRCRRSPR-CSRRPG--GSRLRGGTWTPRLPPTLVSRLPA--PVRCPPA 128
+ARA + R+P R RSP +RRPG R +G P PP PA P P +
Sbjct: 81 LARACYARRLPPRPTRSPAPLARRPGKPPRRPKGAAGHPSAPPAAAPAAPAQPPAPRPES 140
Query: 129 KGASLLHPWSPPTQASGLGPQAVGGRQDRALQLA 162
+ + W + G ++ G A LA
Sbjct: 141 QLSDRPQSWEQKPRGPGRSARSAGAAAPPAGGLA 174
>gi|169206459 PREDICTED: hypothetical protein LOC100132234 [Homo
sapiens]
Length = 202
Score = 33.5 bits (75), Expect = 0.13
Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 5/94 (5%)
Query: 74 VARAPHGSRIPGRCRRSPR-CSRRPG--GSRLRGGTWTPRLPPTLVSRLPA--PVRCPPA 128
+ARA + R+P R RSP +RRPG R +G P PP PA P P +
Sbjct: 81 LARACYARRLPPRPTRSPAPLARRPGKPPRRPKGAAGHPSAPPAAAPAAPAQPPAPRPES 140
Query: 129 KGASLLHPWSPPTQASGLGPQAVGGRQDRALQLA 162
+ + W + G ++ G A LA
Sbjct: 141 QLSDRPQSWEQKPRGPGRSARSAGAAAPPAGGLA 174
>gi|169164483 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 33.1 bits (74), Expect = 0.17
Identities = 32/104 (30%), Positives = 40/104 (38%), Gaps = 7/104 (6%)
Query: 69 RIQDGVARAPHGSR---IPGRCRRSPRCSRRPGGSRLRGGTWTPRLPPTLVSRLPAPVRC 125
R Q A P G R P R P RRP S G WTP PP+ + P +R
Sbjct: 185 RGQGAAAVGPTGPRPTGAPPSRRTPPPGPRRPLRSPHSGSGWTPARPPSPPAGAPEALR- 243
Query: 126 PPAKGASLLHPWSPPTQASGL---GPQAVGGRQDRALQLACEVG 166
PPA P + A GL G + +R Q ++G
Sbjct: 244 PPASTTRAPAPLTLSFSARGLAWAGESPASHQSERRWQWTRKLG 287
>gi|239749023 PREDICTED: hypothetical protein XP_002346884 [Homo
sapiens]
Length = 159
Score = 33.1 bits (74), Expect = 0.17
Identities = 28/80 (35%), Positives = 33/80 (41%), Gaps = 5/80 (6%)
Query: 58 LLELLGGQVLQRIQDGVARAPHGSRIPGRC---RRSPRCSRRPGGSRLRGGTWTPRLPPT 114
++ L+ Q L++I R P R GR RR SRR G R G TPR PP
Sbjct: 17 IIGLVQEQTLEQIPPLARRLPGHQRASGRHLRRRRGSCSSRRLSGPGRRAGAPTPRGPPP 76
Query: 115 LVSRLP--APVRCPPAKGAS 132
P P R A G S
Sbjct: 77 RPRSFPETGPARLGAAAGPS 96
>gi|113414226 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 33.1 bits (74), Expect = 0.17
Identities = 32/104 (30%), Positives = 40/104 (38%), Gaps = 7/104 (6%)
Query: 69 RIQDGVARAPHGSR---IPGRCRRSPRCSRRPGGSRLRGGTWTPRLPPTLVSRLPAPVRC 125
R Q A P G R P R P RRP S G WTP PP+ + P +R
Sbjct: 185 RGQGAAAVGPTGPRPTGAPPSRRTPPPGPRRPLRSPHSGSGWTPARPPSPPAGAPEALR- 243
Query: 126 PPAKGASLLHPWSPPTQASGL---GPQAVGGRQDRALQLACEVG 166
PPA P + A GL G + +R Q ++G
Sbjct: 244 PPASTTRAPAPLTLSFSARGLAWAGESPASHQSERRWQWTRKLG 287
>gi|169205915 PREDICTED: hypothetical protein LOC100132234 [Homo
sapiens]
Length = 202
Score = 33.1 bits (74), Expect = 0.17
Identities = 28/94 (29%), Positives = 39/94 (41%), Gaps = 5/94 (5%)
Query: 74 VARAPHGSRIPGRCRRSPR-CSRRPG--GSRLRGGTWTPRLPPTLVSRLPA--PVRCPPA 128
+ARA + R+P R RSP +RRPG R +G P PP PA P P +
Sbjct: 81 LARACYARRLPPRPTRSPAPLARRPGKPPRRPKGAAGHPSAPPAAAPAAPAQPPAPRPES 140
Query: 129 KGASLLHPWSPPTQASGLGPQAVGGRQDRALQLA 162
+ + W + G ++ G A LA
Sbjct: 141 QLSDRPQSWEQRPRGPGRSARSAGAAAPPAGGLA 174
>gi|239743042 PREDICTED: hypothetical protein XP_002342725 [Homo
sapiens]
Length = 159
Score = 33.1 bits (74), Expect = 0.17
Identities = 28/80 (35%), Positives = 33/80 (41%), Gaps = 5/80 (6%)
Query: 58 LLELLGGQVLQRIQDGVARAPHGSRIPGRC---RRSPRCSRRPGGSRLRGGTWTPRLPPT 114
++ L+ Q L++I R P R GR RR SRR G R G TPR PP
Sbjct: 17 IIGLVQEQTLEQIPPLARRLPGHQRASGRHLRRRRGSCSSRRLSGPGRRAGAPTPRGPPP 76
Query: 115 LVSRLP--APVRCPPAKGAS 132
P P R A G S
Sbjct: 77 RPRSFPETGPARLGAAAGPS 96
>gi|113413437 PREDICTED: hypothetical protein [Homo sapiens]
Length = 324
Score = 33.1 bits (74), Expect = 0.17
Identities = 32/104 (30%), Positives = 40/104 (38%), Gaps = 7/104 (6%)
Query: 69 RIQDGVARAPHGSR---IPGRCRRSPRCSRRPGGSRLRGGTWTPRLPPTLVSRLPAPVRC 125
R Q A P G R P R P RRP S G WTP PP+ + P +R
Sbjct: 185 RGQGAAAVGPTGPRPTGAPPSRRTPPPGPRRPLRSPHSGSGWTPARPPSPPAGAPEALR- 243
Query: 126 PPAKGASLLHPWSPPTQASGL---GPQAVGGRQDRALQLACEVG 166
PPA P + A GL G + +R Q ++G
Sbjct: 244 PPASTTRAPAPLTLSFSARGLAWAGESPASHQSERRWQWTRKLG 287
>gi|7706469 Kruppel-like factor [Homo sapiens]
Length = 355
Score = 33.1 bits (74), Expect = 0.17
Identities = 35/111 (31%), Positives = 41/111 (36%), Gaps = 5/111 (4%)
Query: 73 GVARAPHGSRIPGRCRRSPRCSRRPGGSRLRGGTWTPRLPPTLVSRLPAP---VRCPPAK 129
G+ R P G + G + C R PGG R TP L P +RLPAP PP
Sbjct: 139 GLTRGPRGLKREGAPGPAASCMRGPGG-RPPPPPDTPPLSPDGPARLPAPGPRASFPPPF 197
Query: 130 GASLLHPWSPPTQASGLGPQAVGGRQDRALQLACEVGPGRGPQRGSWVAPA 180
G P + P A G D A A +G RG PA
Sbjct: 198 GGPGFGAPGPGLHYAPPAPPAF-GLFDDAAAAAAALGLAPPAARGLLTPPA 247
>gi|115511036 alpha-kinase 3 [Homo sapiens]
Length = 1907
Score = 33.1 bits (74), Expect = 0.17
Identities = 32/96 (33%), Positives = 38/96 (39%), Gaps = 16/96 (16%)
Query: 84 PGRCRRSPRCSRRPG---GSRLRGGTWTPRLPPTLVSRLPAPVRCPPAKGASLLHPWSPP 140
P + RR R R G G+ GTW P P VS+ P R P +G + PP
Sbjct: 102 PLQTRRYCRHQGRQGSGLGAGPGAGTWAPAPPG--VSKPRCPGRARPGEGQQQVTTARPP 159
Query: 141 TQASGLGPQAVGGRQDRALQLACEVGPGRGPQRGSW 176
G RQ RA A GRGP G+W
Sbjct: 160 AINRG-------ARQPRAGAAAA----GRGPGAGAW 184
>gi|38569475 metaxin 1 isoform 1 [Homo sapiens]
Length = 466
Score = 32.7 bits (73), Expect = 0.22
Identities = 35/108 (32%), Positives = 49/108 (45%), Gaps = 7/108 (6%)
Query: 86 RCRRSPRCSRRPGGSRLRGGTWTPRLPPTLVSRLPAPVRCPPAKG-ASLLHPW-SPPTQA 143
R R +PR + SR G W R PP+ +R P P ++ SL P SP
Sbjct: 59 RRRDTPRRAGPTALSRYVGHLWMGRRPPSPEARGPVPRSSAASRARRSLASPGISPGPLT 118
Query: 144 SGLGPQAVGG--RQDRALQLACEVGPGRGPQRGSWVAPACLWACTSGY 189
+ +G GG RQ RA + EV PG+ + G AP L+ + G+
Sbjct: 119 ATIGGAVAGGGPRQGRA-EAHKEVFPGQ--RVGKMAAPMELFCWSGGW 163
>gi|38569477 metaxin 1 isoform 2 [Homo sapiens]
Length = 435
Score = 32.7 bits (73), Expect = 0.22
Identities = 35/108 (32%), Positives = 49/108 (45%), Gaps = 7/108 (6%)
Query: 86 RCRRSPRCSRRPGGSRLRGGTWTPRLPPTLVSRLPAPVRCPPAKG-ASLLHPW-SPPTQA 143
R R +PR + SR G W R PP+ +R P P ++ SL P SP
Sbjct: 59 RRRDTPRRAGPTALSRYVGHLWMGRRPPSPEARGPVPRSSAASRARRSLASPGISPGPLT 118
Query: 144 SGLGPQAVGG--RQDRALQLACEVGPGRGPQRGSWVAPACLWACTSGY 189
+ +G GG RQ RA + EV PG+ + G AP L+ + G+
Sbjct: 119 ATIGGAVAGGGPRQGRA-EAHKEVFPGQ--RVGKMAAPMELFCWSGGW 163
>gi|239741731 PREDICTED: hypothetical protein XP_002342307 [Homo
sapiens]
Length = 316
Score = 32.7 bits (73), Expect = 0.22
Identities = 32/104 (30%), Positives = 43/104 (41%), Gaps = 20/104 (19%)
Query: 82 RIPGRCRRSPRCSRRPG-GSRLR---GGTWTPRLPPTLVSRLPAPVRCPPAKGASLLHPW 137
R C R+ R PG G + + GGT TP+ +P C P ASLL P
Sbjct: 77 RAGSSCGRAARGFPEPGRGGKTQEWGGGTGTPQ----------SPGPCAPQALASLLGPG 126
Query: 138 SPPTQA------SGLGPQAVGGRQDRALQLACEVGPGRGPQRGS 175
+A SG P+ + G + A A E G G+ P+ S
Sbjct: 127 KAGCRARLQGGSSGASPRRLPGGRGPAAAFAVEPGTGQRPRNTS 170
>gi|84626580 hypothetical protein LOC80178 [Homo sapiens]
Length = 433
Score = 32.7 bits (73), Expect = 0.22
Identities = 33/104 (31%), Positives = 47/104 (45%), Gaps = 11/104 (10%)
Query: 13 LGAVGLQVEADQLVGEVQGVHGQQRAPRDA-PVALAQRHRQQLQLELLELLGGQVLQRIQ 71
L AV ++ EA +L + + R A P+ Q +R L LE L+ + GQ L R+Q
Sbjct: 258 LSAVEVEAEAGRLRKACSLLRLRMREELSAAPMDWMQEYRCLLTLEGLQAMVGQCLHRLQ 317
Query: 72 DGVARAPHGSRIPGRCRRSPRCSRRPGGSRLRGG----TWTPRL 111
+ RA + P C R PG S GG W+P+L
Sbjct: 318 E--LRAAVAEQPPRPC----PVGRPPGASPSCGGRAEPAWSPQL 355
>gi|61966741 TMF regulated nuclear protein [Homo sapiens]
Length = 227
Score = 32.3 bits (72), Expect = 0.29
Identities = 27/88 (30%), Positives = 40/88 (45%), Gaps = 9/88 (10%)
Query: 14 GAVGLQVEADQLVGEVQGVHGQQRAPRDAPVALAQRHRQQLQLELLELLGGQVLQRIQDG 73
GA G +E + + V G++R + + Q HR L EL + L R+ G
Sbjct: 95 GAGGRALELAEARRRLLEVEGRRRLVSELESRVLQLHRVFLAAELRLAHRAESLSRLSGG 154
Query: 74 VAR-----APHGSRIPGRCRRSPRCSRR 96
VA+ A HGSR+ ++ PR RR
Sbjct: 155 VAQAELYLAAHGSRL----KKGPRRGRR 178
>gi|89886475 hypothetical protein LOC163183 [Homo sapiens]
Length = 404
Score = 32.3 bits (72), Expect = 0.29
Identities = 23/69 (33%), Positives = 27/69 (39%), Gaps = 16/69 (23%)
Query: 104 GGTWTPRLPPTLVSRLPAPVRCPPAKGASLLHPWSPPTQASGLGPQAVGGRQDRALQLAC 163
GG W P P S LP W P GLGP +G + R L + C
Sbjct: 230 GGVWGPWAP----SSLPTSTELE----------WDPAGDIGGLGP--LGQKTARTLGVPC 273
Query: 164 EVGPGRGPQ 172
E+ RGPQ
Sbjct: 274 ELCGQRGPQ 282
>gi|169214061 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 32.0 bits (71), Expect = 0.37
Identities = 50/180 (27%), Positives = 61/180 (33%), Gaps = 26/180 (14%)
Query: 40 RDAPVALAQRHRQQLQLELLELLGGQVLQRIQDGVARAPHGSRIPGRCR-------RSPR 92
R +P+ AQ+ R + L +V R G +R G + P R R R
Sbjct: 100 RRSPLKAAQQDRGLPAWGVWLLSRAEVRPRSALGSSRRGLGDKGPRSRRAAEFTQARPTR 159
Query: 93 CSRRPGGSRLRGGTWTPR--------------LPPTLVSRLPAPVRCPPAKGASLL-HPW 137
R PGG R G W PTL LPA PP+ A+ P
Sbjct: 160 KRRTPGGGRPEAGCWLENRRQRRRKAGAERAGAGPTLTPPLPAGSPDPPSPAATAAPQPE 219
Query: 138 SPPTQASGLGPQAVGGRQDRALQLACEVGPGRG-PQRGSWVAPACLWACTSGYRPETWAG 196
P + G R +RA A R P GS A WA RP WAG
Sbjct: 220 QRPHLSRGQWRLLPRRRPERAAGSAGSCSSRRALPASGSGAAMTGSWAAPP--RP-AWAG 276
>gi|169214437 PREDICTED: hypothetical protein [Homo sapiens]
Length = 384
Score = 32.0 bits (71), Expect = 0.37
Identities = 50/180 (27%), Positives = 61/180 (33%), Gaps = 26/180 (14%)
Query: 40 RDAPVALAQRHRQQLQLELLELLGGQVLQRIQDGVARAPHGSRIPGRCR-------RSPR 92
R +P+ AQ+ R + L +V R G +R G + P R R R
Sbjct: 100 RRSPLKAAQQDRGLPAWGVWLLSRAEVRPRSALGSSRRGLGDKGPRSRRAAEFTQARPTR 159
Query: 93 CSRRPGGSRLRGGTWTPR--------------LPPTLVSRLPAPVRCPPAKGASLL-HPW 137
R PGG R G W PTL LPA PP+ A+ P
Sbjct: 160 KRRTPGGGRPEAGCWLENRRQRRRKAGAERAGAGPTLTPPLPAGSPDPPSPAATAAPQPE 219
Query: 138 SPPTQASGLGPQAVGGRQDRALQLACEVGPGRG-PQRGSWVAPACLWACTSGYRPETWAG 196
P + G R +RA A R P GS A WA RP WAG
Sbjct: 220 QRPHLSRGQWRLLPRRRPERAAGSAGSCSSRRALPASGSGAAMTGSWAAPP--RP-AWAG 276
>gi|239749631 PREDICTED: hypothetical protein [Homo sapiens]
Length = 217
Score = 32.0 bits (71), Expect = 0.37
Identities = 35/139 (25%), Positives = 49/139 (35%), Gaps = 21/139 (15%)
Query: 73 GVARAPHGSRIPGRCRRSPRCSRRPGGSRLRG--------GTWTPRL---PPTLVSRLPA 121
G+ A G + G RR+ R + P S R G W+ L PP P
Sbjct: 35 GLLAAEAGGAVLGGGRRAGRRAEPPEPSYSRERRETMEGKGGWSAALGSLPP------PP 88
Query: 122 PVRC----PPAKGASLLHPWSPPTQASGLGPQAVGGRQDRALQLACEVGPGRGPQRGSWV 177
C P + S P P + S P+ G R E G R P RG+
Sbjct: 89 AAACTALKPATRRGSCSAPLGPARRCSARRPRLHQGGAGRLAAGGAEAGERRSPNRGATS 148
Query: 178 APACLWACTSGYRPETWAG 196
+ + + + RP +W G
Sbjct: 149 SLSPIARGAADVRPFSWVG 167
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.319 0.136 0.454
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,337,408
Number of Sequences: 37866
Number of extensions: 592643
Number of successful extensions: 2810
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 42
Number of HSP's successfully gapped in prelim test: 205
Number of HSP's that attempted gapping in prelim test: 2629
Number of HSP's gapped (non-prelim): 366
length of query: 204
length of database: 18,247,518
effective HSP length: 97
effective length of query: 107
effective length of database: 14,574,516
effective search space: 1559473212
effective search space used: 1559473212
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.