Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Search of human proteins with 169206451
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169206451 PREDICTED: similar to hCG1791648 [Homo sapiens]
(127 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169206451 PREDICTED: similar to hCG1791648 [Homo sapiens] 253 4e-68
gi|169205907 PREDICTED: similar to hCG1791648 [Homo sapiens] 251 1e-67
gi|169206069 PREDICTED: similar to hCG1791648 [Homo sapiens] 250 2e-67
gi|51242945 striatin, calmodulin binding protein [Homo sapiens] 119 5e-28
gi|142976686 nuclear autoantigen isoform 1 [Homo sapiens] 108 1e-24
gi|142976675 nuclear autoantigen isoform 2 [Homo sapiens] 108 1e-24
gi|89886480 zinedin isoform 2 [Homo sapiens] 96 1e-20
gi|89886477 zinedin isoform 1 [Homo sapiens] 96 1e-20
gi|61742793 lymphocyte-specific protein 1 isoform 2 [Homo sapiens] 58 2e-09
gi|61742791 lymphocyte-specific protein 1 isoform 2 [Homo sapiens] 58 2e-09
gi|61742789 lymphocyte-specific protein 1 isoform 2 [Homo sapiens] 58 2e-09
gi|10880979 lymphocyte-specific protein 1 isoform 1 [Homo sapiens] 58 2e-09
gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens] 29 0.85
gi|13376725 coiled-coil domain containing 92 [Homo sapiens] 29 1.1
gi|110349719 titin isoform N2-A [Homo sapiens] 28 1.5
gi|110349717 titin isoform novex-2 [Homo sapiens] 28 1.5
gi|110349713 titin isoform novex-1 [Homo sapiens] 28 1.5
gi|110349715 titin isoform N2-B [Homo sapiens] 28 1.5
gi|15559211 RE1-silencing transcription factor [Homo sapiens] 28 1.5
gi|149363664 septin 8 isoform d [Homo sapiens] 28 1.5
gi|149363638 septin 8 isoform c [Homo sapiens] 28 1.5
gi|149363689 septin 8 isoform a [Homo sapiens] 28 1.5
gi|149363661 septin 8 isoform b [Homo sapiens] 28 1.5
gi|148664197 coiled-coil domain containing 40 [Homo sapiens] 28 1.5
gi|197209857 adaptor-related protein complex 3, mu 2 subunit [Ho... 28 1.9
gi|5803000 adaptor-related protein complex 3, mu 2 subunit [Homo... 28 1.9
gi|239754909 PREDICTED: hypothetical protein [Homo sapiens] 28 1.9
gi|93102405 hypothetical protein LOC84182 [Homo sapiens] 28 2.5
gi|6912240 adaptor-related protein complex 3, mu 1 subunit [Homo... 28 2.5
gi|46370095 adaptor-related protein complex 3, mu 1 subunit [Hom... 28 2.5
>gi|169206451 PREDICTED: similar to hCG1791648 [Homo sapiens]
Length = 127
Score = 253 bits (645), Expect = 4e-68
Identities = 127/127 (100%), Positives = 127/127 (100%)
Query: 1 MAVASTKSRWETGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQ 60
MAVASTKSRWETGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQ
Sbjct: 1 MAVASTKSRWETGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQ 60
Query: 61 KRAKYHKLKYGRELNQGDMKPPSYDSDSTLTKQPVNVKTRSTTTQTKVVQFLQITTEDSS 120
KRAKYHKLKYGRELNQGDMKPPSYDSDSTLTKQPVNVKTRSTTTQTKVVQFLQITTEDSS
Sbjct: 61 KRAKYHKLKYGRELNQGDMKPPSYDSDSTLTKQPVNVKTRSTTTQTKVVQFLQITTEDSS 120
Query: 121 VDPPQMR 127
VDPPQMR
Sbjct: 121 VDPPQMR 127
>gi|169205907 PREDICTED: similar to hCG1791648 [Homo sapiens]
Length = 127
Score = 251 bits (641), Expect = 1e-67
Identities = 126/127 (99%), Positives = 126/127 (99%)
Query: 1 MAVASTKSRWETGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQ 60
MAVASTKSRWETGEVQAQSA KTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQ
Sbjct: 1 MAVASTKSRWETGEVQAQSATKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQ 60
Query: 61 KRAKYHKLKYGRELNQGDMKPPSYDSDSTLTKQPVNVKTRSTTTQTKVVQFLQITTEDSS 120
KRAKYHKLKYGRELNQGDMKPPSYDSDSTLTKQPVNVKTRSTTTQTKVVQFLQITTEDSS
Sbjct: 61 KRAKYHKLKYGRELNQGDMKPPSYDSDSTLTKQPVNVKTRSTTTQTKVVQFLQITTEDSS 120
Query: 121 VDPPQMR 127
VDPPQMR
Sbjct: 121 VDPPQMR 127
>gi|169206069 PREDICTED: similar to hCG1791648 [Homo sapiens]
Length = 127
Score = 250 bits (639), Expect = 2e-67
Identities = 126/127 (99%), Positives = 126/127 (99%)
Query: 1 MAVASTKSRWETGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQ 60
MAVASTKSRWETGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQ
Sbjct: 1 MAVASTKSRWETGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQ 60
Query: 61 KRAKYHKLKYGRELNQGDMKPPSYDSDSTLTKQPVNVKTRSTTTQTKVVQFLQITTEDSS 120
KRAKYHKLKYGRELNQGDMKPP YDSDSTLTKQPVNVKTRSTTTQTKVVQFLQITTEDSS
Sbjct: 61 KRAKYHKLKYGRELNQGDMKPPIYDSDSTLTKQPVNVKTRSTTTQTKVVQFLQITTEDSS 120
Query: 121 VDPPQMR 127
VDPPQMR
Sbjct: 121 VDPPQMR 127
>gi|51242945 striatin, calmodulin binding protein [Homo sapiens]
Length = 780
Score = 119 bits (299), Expect = 5e-28
Identities = 61/79 (77%), Positives = 66/79 (83%), Gaps = 1/79 (1%)
Query: 10 WETGEVQ-AQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQKRAKYHKL 68
W EV+ AQ + +AQIAFLQGERK QENLKKDLVR+IKMLEYALKQ+RAKYHKL
Sbjct: 60 WARFEVERAQWEVERAELQAQIAFLQGERKGQENLKKDLVRRIKMLEYALKQERAKYHKL 119
Query: 69 KYGRELNQGDMKPPSYDSD 87
KYG ELNQGDMKPPSYDSD
Sbjct: 120 KYGTELNQGDMKPPSYDSD 138
>gi|142976686 nuclear autoantigen isoform 1 [Homo sapiens]
Length = 797
Score = 108 bits (269), Expect = 1e-24
Identities = 57/107 (53%), Positives = 71/107 (66%), Gaps = 9/107 (8%)
Query: 7 KSRWETGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQKRAKYH 66
++ WE + Q A+IAFLQGERK QENLKKDLVR+IKMLEYALKQ+RAKYH
Sbjct: 83 RAHWEVERAELQ---------ARIAFLQGERKGQENLKKDLVRRIKMLEYALKQERAKYH 133
Query: 67 KLKYGRELNQGDMKPPSYDSDSTLTKQPVNVKTRSTTTQTKVVQFLQ 113
KLKYG ELNQGD+K P+++S+ T + S T + Q L+
Sbjct: 134 KLKYGTELNQGDLKMPTFESEETKDTEAPTAPQNSQLTWKQGRQLLR 180
>gi|142976675 nuclear autoantigen isoform 2 [Homo sapiens]
Length = 713
Score = 108 bits (269), Expect = 1e-24
Identities = 57/107 (53%), Positives = 71/107 (66%), Gaps = 9/107 (8%)
Query: 7 KSRWETGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQKRAKYH 66
++ WE + Q A+IAFLQGERK QENLKKDLVR+IKMLEYALKQ+RAKYH
Sbjct: 83 RAHWEVERAELQ---------ARIAFLQGERKGQENLKKDLVRRIKMLEYALKQERAKYH 133
Query: 67 KLKYGRELNQGDMKPPSYDSDSTLTKQPVNVKTRSTTTQTKVVQFLQ 113
KLKYG ELNQGD+K P+++S+ T + S T + Q L+
Sbjct: 134 KLKYGTELNQGDLKMPTFESEETKDTEAPTAPQNSQLTWKQGRQLLR 180
>gi|89886480 zinedin isoform 2 [Homo sapiens]
Length = 760
Score = 95.5 bits (236), Expect = 1e-20
Identities = 48/74 (64%), Positives = 56/74 (75%), Gaps = 9/74 (12%)
Query: 7 KSRWETGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQKRAKYH 66
K+RWE + Q AQ+AFLQGERK QENLK DLVR+IKMLEYALKQ+RAKYH
Sbjct: 83 KARWEAERAELQ---------AQVAFLQGERKGQENLKTDLVRRIKMLEYALKQERAKYH 133
Query: 67 KLKYGRELNQGDMK 80
KLK+G +LNQG+ K
Sbjct: 134 KLKFGTDLNQGEKK 147
>gi|89886477 zinedin isoform 1 [Homo sapiens]
Length = 753
Score = 95.5 bits (236), Expect = 1e-20
Identities = 48/74 (64%), Positives = 56/74 (75%), Gaps = 9/74 (12%)
Query: 7 KSRWETGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQKRAKYH 66
K+RWE + Q AQ+AFLQGERK QENLK DLVR+IKMLEYALKQ+RAKYH
Sbjct: 83 KARWEAERAELQ---------AQVAFLQGERKGQENLKTDLVRRIKMLEYALKQERAKYH 133
Query: 67 KLKYGRELNQGDMK 80
KLK+G +LNQG+ K
Sbjct: 134 KLKFGTDLNQGEKK 147
>gi|61742793 lymphocyte-specific protein 1 isoform 2 [Homo sapiens]
Length = 277
Score = 58.2 bits (139), Expect = 2e-09
Identities = 28/31 (90%), Positives = 29/31 (93%)
Query: 1 MAVASTKSRWETGEVQAQSAAKTPSCKAQIA 31
MAVASTKSRWETGEVQAQSAAKTPSCK +A
Sbjct: 196 MAVASTKSRWETGEVQAQSAAKTPSCKDIVA 226
>gi|61742791 lymphocyte-specific protein 1 isoform 2 [Homo sapiens]
Length = 277
Score = 58.2 bits (139), Expect = 2e-09
Identities = 28/31 (90%), Positives = 29/31 (93%)
Query: 1 MAVASTKSRWETGEVQAQSAAKTPSCKAQIA 31
MAVASTKSRWETGEVQAQSAAKTPSCK +A
Sbjct: 196 MAVASTKSRWETGEVQAQSAAKTPSCKDIVA 226
>gi|61742789 lymphocyte-specific protein 1 isoform 2 [Homo sapiens]
Length = 277
Score = 58.2 bits (139), Expect = 2e-09
Identities = 28/31 (90%), Positives = 29/31 (93%)
Query: 1 MAVASTKSRWETGEVQAQSAAKTPSCKAQIA 31
MAVASTKSRWETGEVQAQSAAKTPSCK +A
Sbjct: 196 MAVASTKSRWETGEVQAQSAAKTPSCKDIVA 226
>gi|10880979 lymphocyte-specific protein 1 isoform 1 [Homo sapiens]
Length = 339
Score = 58.2 bits (139), Expect = 2e-09
Identities = 28/31 (90%), Positives = 29/31 (93%)
Query: 1 MAVASTKSRWETGEVQAQSAAKTPSCKAQIA 31
MAVASTKSRWETGEVQAQSAAKTPSCK +A
Sbjct: 258 MAVASTKSRWETGEVQAQSAAKTPSCKDIVA 288
>gi|12667788 myosin, heavy polypeptide 9, non-muscle [Homo sapiens]
Length = 1960
Score = 29.3 bits (64), Expect = 0.85
Identities = 17/56 (30%), Positives = 28/56 (50%)
Query: 33 LQGERKDQENLKKDLVRKIKMLEYALKQKRAKYHKLKYGRELNQGDMKPPSYDSDS 88
LQG + E KK LVR+++ +E L+ +R + R+ + D+K DS
Sbjct: 1573 LQGRDEQSEEKKKQLVRQVREMEAELEDERKQRSMAVAARKKLEMDLKDLEAHIDS 1628
>gi|13376725 coiled-coil domain containing 92 [Homo sapiens]
Length = 331
Score = 28.9 bits (63), Expect = 1.1
Identities = 18/64 (28%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 5 STKSRWETGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRK---IKMLEYALKQK 61
+ KS +TG+ ++S+ C+ A L+ + + L K+L +K I +LE +K++
Sbjct: 67 TVKSSEQTGDGTSKSSELKKRCEELEAQLKVKENENAELLKELEQKNAMITVLENTIKER 126
Query: 62 RAKY 65
KY
Sbjct: 127 EKKY 130
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 28.5 bits (62), Expect = 1.5
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 13/118 (11%)
Query: 11 ETGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALK----QKRAKYH 66
ETG+ + KT S A++ ER D+ L ++K + + + +
Sbjct: 13436 ETGD---RVKMKTLSAYAELVISPSERSDKGIYTLKLENRVKTISGEIDVNVIARPSAPK 13492
Query: 67 KLKYG---RELNQGDMKPPSYDSDSTLTKQPVNVKTRSTTTQTKVVQF---LQITTED 118
+LK+G ++ +PP D S LT V + S T TKV+ F L+ T D
Sbjct: 13493 ELKFGDITKDSVHLTWEPPDDDGGSPLTGYVVEKREVSRKTWTKVMDFVTDLEFTVPD 13550
>gi|110349717 titin isoform novex-2 [Homo sapiens]
Length = 27118
Score = 28.5 bits (62), Expect = 1.5
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 13/118 (11%)
Query: 11 ETGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALK----QKRAKYH 66
ETG+ + KT S A++ ER D+ L ++K + + + +
Sbjct: 7131 ETGD---RVKMKTLSAYAELVISPSERSDKGIYTLKLENRVKTISGEIDVNVIARPSAPK 7187
Query: 67 KLKYG---RELNQGDMKPPSYDSDSTLTKQPVNVKTRSTTTQTKVVQF---LQITTED 118
+LK+G ++ +PP D S LT V + S T TKV+ F L+ T D
Sbjct: 7188 ELKFGDITKDSVHLTWEPPDDDGGSPLTGYVVEKREVSRKTWTKVMDFVTDLEFTVPD 7245
>gi|110349713 titin isoform novex-1 [Homo sapiens]
Length = 27051
Score = 28.5 bits (62), Expect = 1.5
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 13/118 (11%)
Query: 11 ETGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALK----QKRAKYH 66
ETG+ + KT S A++ ER D+ L ++K + + + +
Sbjct: 7064 ETGD---RVKMKTLSAYAELVISPSERSDKGIYTLKLENRVKTISGEIDVNVIARPSAPK 7120
Query: 67 KLKYG---RELNQGDMKPPSYDSDSTLTKQPVNVKTRSTTTQTKVVQF---LQITTED 118
+LK+G ++ +PP D S LT V + S T TKV+ F L+ T D
Sbjct: 7121 ELKFGDITKDSVHLTWEPPDDDGGSPLTGYVVEKREVSRKTWTKVMDFVTDLEFTVPD 7178
>gi|110349715 titin isoform N2-B [Homo sapiens]
Length = 26926
Score = 28.5 bits (62), Expect = 1.5
Identities = 31/118 (26%), Positives = 50/118 (42%), Gaps = 13/118 (11%)
Query: 11 ETGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALK----QKRAKYH 66
ETG+ + KT S A++ ER D+ L ++K + + + +
Sbjct: 6939 ETGD---RVKMKTLSAYAELVISPSERSDKGIYTLKLENRVKTISGEIDVNVIARPSAPK 6995
Query: 67 KLKYG---RELNQGDMKPPSYDSDSTLTKQPVNVKTRSTTTQTKVVQF---LQITTED 118
+LK+G ++ +PP D S LT V + S T TKV+ F L+ T D
Sbjct: 6996 ELKFGDITKDSVHLTWEPPDDDGGSPLTGYVVEKREVSRKTWTKVMDFVTDLEFTVPD 7053
>gi|15559211 RE1-silencing transcription factor [Homo sapiens]
Length = 1097
Score = 28.5 bits (62), Expect = 1.5
Identities = 18/71 (25%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Query: 59 KQKRAKYHKLKYGRELNQGDMKPPSYDSDSTLTKQPVNVKT---RSTTTQTKVVQFLQIT 115
K+K+ + +E+ +GD K +T K+ KT +S+ +K Q +
Sbjct: 543 KKKKVESKSKNNSQEVPKGDSKVEENKKQNTCMKKSTKKKTLKNKSSKKSSKPPQKEPVE 602
Query: 116 TEDSSVDPPQM 126
+ +DPPQM
Sbjct: 603 KGSAQMDPPQM 613
>gi|149363664 septin 8 isoform d [Homo sapiens]
Length = 369
Score = 28.5 bits (62), Expect = 1.5
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 13 GEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQKRAKYH-KLKYG 71
G+ Q S +T K + FL ++ +E +++ V K+K E LK+K + H K ++
Sbjct: 255 GDSQPFSLQETYEAKRK-EFLSELQRKEEEMRQMFVNKVKETELELKEKERELHEKFEHL 313
Query: 72 RELNQGDMK 80
+ ++Q + +
Sbjct: 314 KRVHQEEKR 322
>gi|149363638 septin 8 isoform c [Homo sapiens]
Length = 442
Score = 28.5 bits (62), Expect = 1.5
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 13 GEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQKRAKYH-KLKYG 71
G+ Q S +T K + FL ++ +E +++ V K+K E LK+K + H K ++
Sbjct: 315 GDSQPFSLQETYEAKRK-EFLSELQRKEEEMRQMFVNKVKETELELKEKERELHEKFEHL 373
Query: 72 RELNQGDMK 80
+ ++Q + +
Sbjct: 374 KRVHQEEKR 382
>gi|149363689 septin 8 isoform a [Homo sapiens]
Length = 483
Score = 28.5 bits (62), Expect = 1.5
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 13 GEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQKRAKYH-KLKYG 71
G+ Q S +T K + FL ++ +E +++ V K+K E LK+K + H K ++
Sbjct: 315 GDSQPFSLQETYEAKRK-EFLSELQRKEEEMRQMFVNKVKETELELKEKERELHEKFEHL 373
Query: 72 RELNQGDMK 80
+ ++Q + +
Sbjct: 374 KRVHQEEKR 382
>gi|149363661 septin 8 isoform b [Homo sapiens]
Length = 429
Score = 28.5 bits (62), Expect = 1.5
Identities = 18/69 (26%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 13 GEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYALKQKRAKYH-KLKYG 71
G+ Q S +T K + FL ++ +E +++ V K+K E LK+K + H K ++
Sbjct: 315 GDSQPFSLQETYEAKRK-EFLSELQRKEEEMRQMFVNKVKETELELKEKERELHEKFEHL 373
Query: 72 RELNQGDMK 80
+ ++Q + +
Sbjct: 374 KRVHQEEKR 382
>gi|148664197 coiled-coil domain containing 40 [Homo sapiens]
Length = 1142
Score = 28.5 bits (62), Expect = 1.5
Identities = 29/126 (23%), Positives = 55/126 (43%), Gaps = 18/126 (14%)
Query: 2 AVASTKSRWETGEVQAQSAAKTPSCKA------QIAFLQGERKD-------QENLKKDLV 48
A+AS++ R + E+QA A T +C A ++A LQ E ++ +N+ +D+
Sbjct: 353 AMASSERRQKEEELQAARALYTKTCAAANEERKKLAALQTEMENLALHLFYMQNIDQDMR 412
Query: 49 RKIKMLEYALKQK-----RAKYHKLKYGRELNQGDMKPPSYDSDSTLTKQPVNVKTRSTT 103
I+++ +K+ RA+ K K ++Q + + D L + + T
Sbjct: 413 DDIRVMTQVVKKAETERIRAEIEKKKQDLYVDQLTTRAQQLEEDIALFEAQYLAQAEDTR 472
Query: 104 TQTKVV 109
K V
Sbjct: 473 ILRKAV 478
>gi|197209857 adaptor-related protein complex 3, mu 2 subunit [Homo
sapiens]
Length = 418
Score = 28.1 bits (61), Expect = 1.9
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 10 WETGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYA-LKQKRAKYHKL 68
W+ G++ Q K PS K ++ G K EN +L KI+ L + LK R +
Sbjct: 341 WDVGKINPQ---KLPSLKGTMSLQAGASKPDENPTINLQFKIQQLAISGLKVNRLDMYGE 397
Query: 69 KY 70
KY
Sbjct: 398 KY 399
>gi|5803000 adaptor-related protein complex 3, mu 2 subunit [Homo
sapiens]
Length = 418
Score = 28.1 bits (61), Expect = 1.9
Identities = 20/62 (32%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 10 WETGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYA-LKQKRAKYHKL 68
W+ G++ Q K PS K ++ G K EN +L KI+ L + LK R +
Sbjct: 341 WDVGKINPQ---KLPSLKGTMSLQAGASKPDENPTINLQFKIQQLAISGLKVNRLDMYGE 397
Query: 69 KY 70
KY
Sbjct: 398 KY 399
>gi|239754909 PREDICTED: hypothetical protein [Homo sapiens]
Length = 245
Score = 28.1 bits (61), Expect = 1.9
Identities = 16/44 (36%), Positives = 24/44 (54%)
Query: 34 QGERKDQENLKKDLVRKIKMLEYALKQKRAKYHKLKYGRELNQG 77
+GERK +E +K R+ + E K+KR K K + GR +G
Sbjct: 87 KGERKKEERERKKRRREKENKEGEEKEKRKKKEKKERGRTSKEG 130
>gi|93102405 hypothetical protein LOC84182 [Homo sapiens]
Length = 757
Score = 27.7 bits (60), Expect = 2.5
Identities = 25/97 (25%), Positives = 43/97 (44%), Gaps = 16/97 (16%)
Query: 39 DQENLKKDL-------VRKIKMLEYALKQKRAKYHKLKYGRE------LNQGDMKPPSYD 85
DQE + DL +RK+ LE+ K+ +AK + LK E L+ ++
Sbjct: 31 DQERPRSDLSINNRNDLRKVLHLEFLYKENKAKENPLKTSLELITRYFLDHFGNTANNFT 90
Query: 86 SDSTLTKQPV---NVKTRSTTTQTKVVQFLQITTEDS 119
D+ + V N K S ++T +V ++ ED+
Sbjct: 91 QDTPIPALSVPKKNNKVPSRCSETTLVNIYDLSDEDA 127
>gi|6912240 adaptor-related protein complex 3, mu 1 subunit [Homo
sapiens]
Length = 418
Score = 27.7 bits (60), Expect = 2.5
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 10 WETGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYA-LKQKRAKYHKL 68
W+ G++ Q K PS K + G K +EN ++ KI+ L + LK R +
Sbjct: 341 WDVGKITPQ---KLPSLKGLVNLQSGAPKPEENPSLNIQFKIQQLAISGLKVNRLDMYGE 397
Query: 69 KY 70
KY
Sbjct: 398 KY 399
>gi|46370095 adaptor-related protein complex 3, mu 1 subunit [Homo
sapiens]
Length = 418
Score = 27.7 bits (60), Expect = 2.5
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Query: 10 WETGEVQAQSAAKTPSCKAQIAFLQGERKDQENLKKDLVRKIKMLEYA-LKQKRAKYHKL 68
W+ G++ Q K PS K + G K +EN ++ KI+ L + LK R +
Sbjct: 341 WDVGKITPQ---KLPSLKGLVNLQSGAPKPEENPSLNIQFKIQQLAISGLKVNRLDMYGE 397
Query: 69 KY 70
KY
Sbjct: 398 KY 399
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.309 0.122 0.333
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,385,320
Number of Sequences: 37866
Number of extensions: 149270
Number of successful extensions: 651
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 597
Number of HSP's gapped (non-prelim): 94
length of query: 127
length of database: 18,247,518
effective HSP length: 90
effective length of query: 37
effective length of database: 14,839,578
effective search space: 549064386
effective search space used: 549064386
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
Home |
Table of Contents |
Search text |
Search genes |
Search sequences |
Purchase |
FAQ |
Blog |
Help
Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.