LOC341378 8452

Name: LOC341378	Sequence: fasta or formatted (352aa)		NCBI GI: 169205597
Description: PREDICTED: similar to Thyroid hormone receptor interactor 11		Not currently referenced in the text
Other entries for this name: alt mRNA {352aa} PREDICTED: hypothetical protein alt mRNA {352aa} PREDICTED: similar to Thyroid hormone receptor interactor 11
Composition: Amino acid Percentage Count Longest homopolymer A alanine 6.0 21 2 C cysteine 0.3 1 1 D aspartate 4.3 15 2 E glutamate 8.8 31 2 F phenylalanine 2.8 10 1 G glycine 4.3 15 2 H histidine 2.6 9 1 I isoleucine 2.0 7 1 K lysine 7.7 27 3 L leucine 12.8 45 3 M methionine 2.8 10 1 N asparagine 4.5 16 1 P proline 5.7 20 3 Q glutamine 8.2 29 3 R arginine 5.4 19 3 S serine 9.9 35 2 T threonine 2.8 10 1 V valine 7.4 26 2 W tryptophan 1.1 4 1 Y tyrosine 0.6 2 1			Comparative genomics: Search single species RefSeq proteins at NCBI H. sapiens M. musculus D. rerio C. intestinalis S. purpuratus D. melanogaster C. elegans A. thaliana S. cerevisiae E. coli W3110 A. pernix K1 Search summary Figure data Additional searches of RefSeq proteins at NCBI All Eukaryotes Bacteria Archaea Viruses Primates Mammals Vertebrates
Related human proteins: Protein Relative score Description Self-match 1.000 PREDICTED: similar to Thyroid hormone receptor inte... LOC341378 1.000 PREDICTED: similar to Thyroid hormone receptor inte... LOC341378 1.000 PREDICTED: hypothetical protein TRIP11 0.886 thyroid hormone receptor interactor 11 SMC1B 0.041 SMC1 structural maintenance of chromosomes 1-like 2 ... ZNF853 0.036 zinc finger protein 853 MYH13 0.033 myosin, heavy polypeptide 13, skeletal muscle [Homo... CEP290 0.033 centrosomal protein 290kDa CENPE 0.033 centromere protein E GIGYF2 0.033 GRB10 interacting GYF protein 2 isoform c GIGYF2 0.033 GRB10 interacting GYF protein 2 isoform a GIGYF2 0.033 GRB10 interacting GYF protein 2 isoform b GIGYF2 0.033 GRB10 interacting GYF protein 2 isoform b MYO18A 0.033 myosin 18A isoform b MYO18A 0.033 myosin 18A isoform a CLIP1 0.032 restin isoform b CLIP1 0.032 restin isoform a GOLGA1 0.032 golgin 97 LEKR1 0.032 leucine, glutamate and lysine rich 1 RAD50 0.030 RAD50 homolog isoform 2 RAD50 0.030 RAD50 homolog isoform 1 LOC100133758 0.030 PREDICTED: hypothetical protein, partial CENPF 0.030 centromere protein F MYH7 0.029 myosin, heavy chain 7, cardiac muscle, beta ERC1 0.029 RAB6-interacting protein 2 isoform epsilon ERC1 0.029 RAB6-interacting protein 2 isoform delta RB1CC1 0.029 Rb1-inducible coiled coil protein 1 isoform 2 [Homo... RB1CC1 0.029 Rb1-inducible coiled coil protein 1 isoform 1 [Homo... EEA1 0.029 early endosome antigen 1, 162kD LOC727832 0.029 golgi autoantigen, golgin subfamily a-like Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.