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Search of human proteins with 169203191
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169203191 PREDICTED: hypothetical protein [Homo sapiens]
(158 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169203191 PREDICTED: hypothetical protein [Homo sapiens] 333 5e-92
gi|169203681 PREDICTED: hypothetical protein [Homo sapiens] 333 5e-92
gi|169202107 PREDICTED: hypothetical protein [Homo sapiens] 333 5e-92
gi|110349719 titin isoform N2-A [Homo sapiens] 30 0.66
gi|110349717 titin isoform novex-2 [Homo sapiens] 30 0.66
gi|110349713 titin isoform novex-1 [Homo sapiens] 30 0.66
gi|110349715 titin isoform N2-B [Homo sapiens] 30 0.66
gi|110349721 titin isoform novex-3 [Homo sapiens] 29 1.5
gi|5174607 NGFI-A binding protein 2 [Homo sapiens] 29 1.5
gi|215422375 neural precursor cell expressed, developmentally do... 29 1.9
gi|5453680 neural precursor cell expressed, developmentally down... 29 1.9
gi|58743365 ring finger protein 157 [Homo sapiens] 28 3.3
gi|6912460 GRB2-associated binding protein 2 isoform b [Homo sap... 28 4.3
gi|18105042 GRB2-associated binding protein 2 isoform a [Homo sa... 28 4.3
gi|51558701 Bcl2 modifying factor isoform bmf-2 [Homo sapiens] 28 4.3
gi|15723378 Bcl2 modifying factor isoform bmf-1 [Homo sapiens] 28 4.3
gi|51558688 Bcl2 modifying factor isoform bmf-1 [Homo sapiens] 28 4.3
gi|66529407 tensin [Homo sapiens] 28 4.3
gi|27734911 DAZ interacting protein 1-like [Homo sapiens] 28 4.3
gi|11968059 matrix metalloproteinase 25 preproprotein [Homo sapi... 27 7.3
gi|7661990 mastermind-like 1 [Homo sapiens] 27 7.3
gi|126091130 Gab3 protein isoform 1 [Homo sapiens] 27 7.3
gi|18079323 Gab3 protein isoform 2 [Homo sapiens] 27 7.3
gi|251823730 cat eye syndrome chromosome region, candidate 6 iso... 27 9.5
gi|13994236 cat eye syndrome chromosome region, candidate 6 isof... 27 9.5
gi|46852147 mitochondrial isoleucine tRNA synthetase [Homo sapiens] 27 9.5
>gi|169203191 PREDICTED: hypothetical protein [Homo sapiens]
Length = 158
Score = 333 bits (853), Expect = 5e-92
Identities = 158/158 (100%), Positives = 158/158 (100%)
Query: 1 MPWSSRDPLKENEEIQKQWPPAKRMATQPLQNHSGAALGPMLGLCLTLGFSESPQRLFSR 60
MPWSSRDPLKENEEIQKQWPPAKRMATQPLQNHSGAALGPMLGLCLTLGFSESPQRLFSR
Sbjct: 1 MPWSSRDPLKENEEIQKQWPPAKRMATQPLQNHSGAALGPMLGLCLTLGFSESPQRLFSR 60
Query: 61 NTLPVPDHMAGVMGSIFFCDGDMFTFLGPDSAHLRSTAPTLLPESFTLFRVSESLGELTH 120
NTLPVPDHMAGVMGSIFFCDGDMFTFLGPDSAHLRSTAPTLLPESFTLFRVSESLGELTH
Sbjct: 61 NTLPVPDHMAGVMGSIFFCDGDMFTFLGPDSAHLRSTAPTLLPESFTLFRVSESLGELTH 120
Query: 121 PGTEEDEAAERSLVPPERPSDLWEWLITGWSAHNSLSP 158
PGTEEDEAAERSLVPPERPSDLWEWLITGWSAHNSLSP
Sbjct: 121 PGTEEDEAAERSLVPPERPSDLWEWLITGWSAHNSLSP 158
>gi|169203681 PREDICTED: hypothetical protein [Homo sapiens]
Length = 179
Score = 333 bits (853), Expect = 5e-92
Identities = 158/158 (100%), Positives = 158/158 (100%)
Query: 1 MPWSSRDPLKENEEIQKQWPPAKRMATQPLQNHSGAALGPMLGLCLTLGFSESPQRLFSR 60
MPWSSRDPLKENEEIQKQWPPAKRMATQPLQNHSGAALGPMLGLCLTLGFSESPQRLFSR
Sbjct: 22 MPWSSRDPLKENEEIQKQWPPAKRMATQPLQNHSGAALGPMLGLCLTLGFSESPQRLFSR 81
Query: 61 NTLPVPDHMAGVMGSIFFCDGDMFTFLGPDSAHLRSTAPTLLPESFTLFRVSESLGELTH 120
NTLPVPDHMAGVMGSIFFCDGDMFTFLGPDSAHLRSTAPTLLPESFTLFRVSESLGELTH
Sbjct: 82 NTLPVPDHMAGVMGSIFFCDGDMFTFLGPDSAHLRSTAPTLLPESFTLFRVSESLGELTH 141
Query: 121 PGTEEDEAAERSLVPPERPSDLWEWLITGWSAHNSLSP 158
PGTEEDEAAERSLVPPERPSDLWEWLITGWSAHNSLSP
Sbjct: 142 PGTEEDEAAERSLVPPERPSDLWEWLITGWSAHNSLSP 179
>gi|169202107 PREDICTED: hypothetical protein [Homo sapiens]
Length = 179
Score = 333 bits (853), Expect = 5e-92
Identities = 158/158 (100%), Positives = 158/158 (100%)
Query: 1 MPWSSRDPLKENEEIQKQWPPAKRMATQPLQNHSGAALGPMLGLCLTLGFSESPQRLFSR 60
MPWSSRDPLKENEEIQKQWPPAKRMATQPLQNHSGAALGPMLGLCLTLGFSESPQRLFSR
Sbjct: 22 MPWSSRDPLKENEEIQKQWPPAKRMATQPLQNHSGAALGPMLGLCLTLGFSESPQRLFSR 81
Query: 61 NTLPVPDHMAGVMGSIFFCDGDMFTFLGPDSAHLRSTAPTLLPESFTLFRVSESLGELTH 120
NTLPVPDHMAGVMGSIFFCDGDMFTFLGPDSAHLRSTAPTLLPESFTLFRVSESLGELTH
Sbjct: 82 NTLPVPDHMAGVMGSIFFCDGDMFTFLGPDSAHLRSTAPTLLPESFTLFRVSESLGELTH 141
Query: 121 PGTEEDEAAERSLVPPERPSDLWEWLITGWSAHNSLSP 158
PGTEEDEAAERSLVPPERPSDLWEWLITGWSAHNSLSP
Sbjct: 142 PGTEEDEAAERSLVPPERPSDLWEWLITGWSAHNSLSP 179
>gi|110349719 titin isoform N2-A [Homo sapiens]
Length = 33423
Score = 30.4 bits (67), Expect = 0.66
Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 80 DGDMFTFLGPDSAHLRSTAPTLLPESFTLFRV-SESLGELTHP-GTEEDEAAERSLVPPE 137
DG +T + PD P LL E FRV +E+ + P T + A + PP+
Sbjct: 15954 DGKAWTKVNPDCGSTTFVVPDLLSEQQYFFRVRAENRFGIGPPVETIQRTTARDPIYPPD 16013
Query: 138 RPSDLWEWLITGWSAHNSLSP 158
P L LIT + H S P
Sbjct: 16014 PPIKLKIGLITKNTVHLSWKP 16034
Score = 29.3 bits (64), Expect = 1.5
Identities = 11/46 (23%), Positives = 23/46 (50%)
Query: 102 LPESFTLFRVSESLGELTHPGTEEDEAAERSLVPPERPSDLWEWLI 147
+PE+F + + + TH +++ + ++ P PSD EW +
Sbjct: 1485 MPETFWFHDGQQIVNDYTHKVVIKEDGTQSLIIVPATPSDSGEWTV 1530
>gi|110349717 titin isoform novex-2 [Homo sapiens]
Length = 27118
Score = 30.4 bits (67), Expect = 0.66
Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 80 DGDMFTFLGPDSAHLRSTAPTLLPESFTLFRV-SESLGELTHP-GTEEDEAAERSLVPPE 137
DG +T + PD P LL E FRV +E+ + P T + A + PP+
Sbjct: 9649 DGKAWTKVNPDCGSTTFVVPDLLSEQQYFFRVRAENRFGIGPPVETIQRTTARDPIYPPD 9708
Query: 138 RPSDLWEWLITGWSAHNSLSP 158
P L LIT + H S P
Sbjct: 9709 PPIKLKIGLITKNTVHLSWKP 9729
Score = 29.3 bits (64), Expect = 1.5
Identities = 11/46 (23%), Positives = 23/46 (50%)
Query: 102 LPESFTLFRVSESLGELTHPGTEEDEAAERSLVPPERPSDLWEWLI 147
+PE+F + + + TH +++ + ++ P PSD EW +
Sbjct: 1439 MPETFWFHDGQQIVNDYTHKVVIKEDGTQSLIIVPATPSDSGEWTV 1484
>gi|110349713 titin isoform novex-1 [Homo sapiens]
Length = 27051
Score = 30.4 bits (67), Expect = 0.66
Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 80 DGDMFTFLGPDSAHLRSTAPTLLPESFTLFRV-SESLGELTHP-GTEEDEAAERSLVPPE 137
DG +T + PD P LL E FRV +E+ + P T + A + PP+
Sbjct: 9582 DGKAWTKVNPDCGSTTFVVPDLLSEQQYFFRVRAENRFGIGPPVETIQRTTARDPIYPPD 9641
Query: 138 RPSDLWEWLITGWSAHNSLSP 158
P L LIT + H S P
Sbjct: 9642 PPIKLKIGLITKNTVHLSWKP 9662
Score = 29.3 bits (64), Expect = 1.5
Identities = 11/46 (23%), Positives = 23/46 (50%)
Query: 102 LPESFTLFRVSESLGELTHPGTEEDEAAERSLVPPERPSDLWEWLI 147
+PE+F + + + TH +++ + ++ P PSD EW +
Sbjct: 1439 MPETFWFHDGQQIVNDYTHKVVIKEDGTQSLIIVPATPSDSGEWTV 1484
>gi|110349715 titin isoform N2-B [Homo sapiens]
Length = 26926
Score = 30.4 bits (67), Expect = 0.66
Identities = 26/81 (32%), Positives = 35/81 (43%), Gaps = 2/81 (2%)
Query: 80 DGDMFTFLGPDSAHLRSTAPTLLPESFTLFRV-SESLGELTHP-GTEEDEAAERSLVPPE 137
DG +T + PD P LL E FRV +E+ + P T + A + PP+
Sbjct: 9457 DGKAWTKVNPDCGSTTFVVPDLLSEQQYFFRVRAENRFGIGPPVETIQRTTARDPIYPPD 9516
Query: 138 RPSDLWEWLITGWSAHNSLSP 158
P L LIT + H S P
Sbjct: 9517 PPIKLKIGLITKNTVHLSWKP 9537
Score = 29.3 bits (64), Expect = 1.5
Identities = 11/46 (23%), Positives = 23/46 (50%)
Query: 102 LPESFTLFRVSESLGELTHPGTEEDEAAERSLVPPERPSDLWEWLI 147
+PE+F + + + TH +++ + ++ P PSD EW +
Sbjct: 1439 MPETFWFHDGQQIVNDYTHKVVIKEDGTQSLIIVPATPSDSGEWTV 1484
>gi|110349721 titin isoform novex-3 [Homo sapiens]
Length = 5604
Score = 29.3 bits (64), Expect = 1.5
Identities = 11/46 (23%), Positives = 23/46 (50%)
Query: 102 LPESFTLFRVSESLGELTHPGTEEDEAAERSLVPPERPSDLWEWLI 147
+PE+F + + + TH +++ + ++ P PSD EW +
Sbjct: 1485 MPETFWFHDGQQIVNDYTHKVVIKEDGTQSLIIVPATPSDSGEWTV 1530
>gi|5174607 NGFI-A binding protein 2 [Homo sapiens]
Length = 525
Score = 29.3 bits (64), Expect = 1.5
Identities = 12/33 (36%), Positives = 19/33 (57%)
Query: 108 LFRVSESLGELTHPGTEEDEAAERSLVPPERPS 140
L ++ + +GE +HP ++ S VPP RPS
Sbjct: 375 LKKLKQEVGEQSHPEIQQPPPGPESYVPPYRPS 407
>gi|215422375 neural precursor cell expressed, developmentally
down-regulated 9 isoform 3 [Homo sapiens]
Length = 834
Score = 28.9 bits (63), Expect = 1.9
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 88 GPDSAHLRSTAPTLLPESFTLFRVSESLGELTHPGTEEDEAAERSLVP 135
GP S HL++ +++ + T + S G+L HPG + +A ++L P
Sbjct: 560 GPGSLHLKNGPESIM--NSTEYPHGGSQGQLLHPGDHKAQAHNKALPP 605
>gi|5453680 neural precursor cell expressed, developmentally
down-regulated 9 isoform 1 [Homo sapiens]
Length = 834
Score = 28.9 bits (63), Expect = 1.9
Identities = 15/48 (31%), Positives = 27/48 (56%), Gaps = 2/48 (4%)
Query: 88 GPDSAHLRSTAPTLLPESFTLFRVSESLGELTHPGTEEDEAAERSLVP 135
GP S HL++ +++ + T + S G+L HPG + +A ++L P
Sbjct: 560 GPGSLHLKNGPESIM--NSTEYPHGGSQGQLLHPGDHKAQAHNKALPP 605
>gi|58743365 ring finger protein 157 [Homo sapiens]
Length = 679
Score = 28.1 bits (61), Expect = 3.3
Identities = 20/60 (33%), Positives = 27/60 (45%), Gaps = 1/60 (1%)
Query: 88 GPDSAHLRSTAPTLLPESFTLFRVSESLGELTHPGTEEDEAAERSLVPPER-PSDLWEWL 146
GP S+ L + ++ + VS G PGTEE+ A S P R PS+ E L
Sbjct: 509 GPASSSLAQSVMSMASSQISTDTVSSMSGSYIAPGTEEEGEALSSPQPASRAPSEEGEGL 568
>gi|6912460 GRB2-associated binding protein 2 isoform b [Homo
sapiens]
Length = 638
Score = 27.7 bits (60), Expect = 4.3
Identities = 22/81 (27%), Positives = 30/81 (37%), Gaps = 12/81 (14%)
Query: 26 ATQPLQNHSGAALGPMLGLCLTLGFSESPQRLFSRNTLPVPDHMAGVMGSIFFCDGDMFT 85
+T L+N S A GP S S Q L P H + +FT
Sbjct: 86 STDSLRNVSSAGHGPRSS---PAELSSSSQHLLRERKSSAPSHSS---------QPTLFT 133
Query: 86 FLGPDSAHLRSTAPTLLPESF 106
F P S H++ T T P+ +
Sbjct: 134 FEPPVSNHMQPTLSTSAPQEY 154
>gi|18105042 GRB2-associated binding protein 2 isoform a [Homo
sapiens]
Length = 676
Score = 27.7 bits (60), Expect = 4.3
Identities = 22/81 (27%), Positives = 30/81 (37%), Gaps = 12/81 (14%)
Query: 26 ATQPLQNHSGAALGPMLGLCLTLGFSESPQRLFSRNTLPVPDHMAGVMGSIFFCDGDMFT 85
+T L+N S A GP S S Q L P H + +FT
Sbjct: 124 STDSLRNVSSAGHGPRSS---PAELSSSSQHLLRERKSSAPSHSS---------QPTLFT 171
Query: 86 FLGPDSAHLRSTAPTLLPESF 106
F P S H++ T T P+ +
Sbjct: 172 FEPPVSNHMQPTLSTSAPQEY 192
>gi|51558701 Bcl2 modifying factor isoform bmf-2 [Homo sapiens]
Length = 163
Score = 27.7 bits (60), Expect = 4.3
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 8/51 (15%)
Query: 26 ATQPLQNHSGAALGPMLGLCLTLGFSESPQRLFSRNT---LPVPDHMAGVM 73
ATQ L S P G+ L G +E PQRLF N LP+P V+
Sbjct: 69 ATQTLSPAS-----PSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVL 114
>gi|15723378 Bcl2 modifying factor isoform bmf-1 [Homo sapiens]
Length = 184
Score = 27.7 bits (60), Expect = 4.3
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 8/51 (15%)
Query: 26 ATQPLQNHSGAALGPMLGLCLTLGFSESPQRLFSRNT---LPVPDHMAGVM 73
ATQ L S P G+ L G +E PQRLF N LP+P V+
Sbjct: 69 ATQTLSPAS-----PSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVL 114
>gi|51558688 Bcl2 modifying factor isoform bmf-1 [Homo sapiens]
Length = 184
Score = 27.7 bits (60), Expect = 4.3
Identities = 20/51 (39%), Positives = 24/51 (47%), Gaps = 8/51 (15%)
Query: 26 ATQPLQNHSGAALGPMLGLCLTLGFSESPQRLFSRNT---LPVPDHMAGVM 73
ATQ L S P G+ L G +E PQRLF N LP+P V+
Sbjct: 69 ATQTLSPAS-----PSQGVMLPCGVTEEPQRLFYGNAGYRLPLPASFPAVL 114
>gi|66529407 tensin [Homo sapiens]
Length = 1735
Score = 27.7 bits (60), Expect = 4.3
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 2 PWSSRDPLKENEEIQKQWPPAKRMATQPLQNHS 34
P S+ PL +++ + WP A +++QPL S
Sbjct: 721 PASAAAPLHKSQSVPGAWPGASPLSSQPLSGSS 753
>gi|27734911 DAZ interacting protein 1-like [Homo sapiens]
Length = 767
Score = 27.7 bits (60), Expect = 4.3
Identities = 21/59 (35%), Positives = 26/59 (44%), Gaps = 12/59 (20%)
Query: 112 SESLGELTHP-GTEEDEAAER----SLVPPE-------RPSDLWEWLITGWSAHNSLSP 158
S G T P +EED +R SL PP+ RP D W+W T S N+ P
Sbjct: 605 SSGPGMSTPPFSSEEDSEGDRVQRVSLQPPKVPSRMVPRPKDDWDWSDTETSEENAQPP 663
>gi|11968059 matrix metalloproteinase 25 preproprotein [Homo
sapiens]
Length = 562
Score = 26.9 bits (58), Expect = 7.3
Identities = 16/54 (29%), Positives = 23/54 (42%)
Query: 62 TLPVPDHMAGVMGSIFFCDGDMFTFLGPDSAHLRSTAPTLLPESFTLFRVSESL 115
+ P+PD G +I G+ F F GP L+ + + P L R E L
Sbjct: 310 SFPIPDRCEGNFDAIANIRGETFFFKGPWFWRLQPSGQLVSPRPARLHRFWEGL 363
>gi|7661990 mastermind-like 1 [Homo sapiens]
Length = 1016
Score = 26.9 bits (58), Expect = 7.3
Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 16/112 (14%)
Query: 34 SGAALGPMLGLCLTLGFSESPQRLFSRNTLPVPDHMAGVMGSIFFCDGDMFTFLGPDSAH 93
SG+A L + + SP F + L P AG G TFLGP SA
Sbjct: 284 SGSATQTPLAQDINIKTEFSPAA-FEQEQLGSPQVRAGSAGQ---------TFLGPSSAP 333
Query: 94 LRSTAPTLLPESFTLFRVS-----ESLGELTHPGTEEDEAAERSLVPPERPS 140
+ + +P+ L S TLF S ++ P + + + A+R+L PS
Sbjct: 334 VSTDSPS-LGGSQTLFHTSGQPRADNPSPNLMPASAQAQNAQRALAGVVLPS 384
>gi|126091130 Gab3 protein isoform 1 [Homo sapiens]
Length = 587
Score = 26.9 bits (58), Expect = 7.3
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Query: 88 GPDSAHLRSTAPTLLPESFTLFRVSESLGELTHPGTEEDEAAERSLVPPERPSDLWEWLI 147
GP HL S++P L + +V ++ G L E D + P +PS L E
Sbjct: 265 GPPRDHL-SSSPLLESSLSSTIQVDKNQGSLPCGAKELDIMSNTPPPRPPKPSHLSERRQ 323
Query: 148 TGWSAHN 154
WS H+
Sbjct: 324 EEWSTHS 330
>gi|18079323 Gab3 protein isoform 2 [Homo sapiens]
Length = 586
Score = 26.9 bits (58), Expect = 7.3
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Query: 88 GPDSAHLRSTAPTLLPESFTLFRVSESLGELTHPGTEEDEAAERSLVPPERPSDLWEWLI 147
GP HL S++P L + +V ++ G L E D + P +PS L E
Sbjct: 264 GPPRDHL-SSSPLLESSLSSTIQVDKNQGSLPCGAKELDIMSNTPPPRPPKPSHLSERRQ 322
Query: 148 TGWSAHN 154
WS H+
Sbjct: 323 EEWSTHS 329
>gi|251823730 cat eye syndrome chromosome region, candidate 6
isoform b [Homo sapiens]
Length = 223
Score = 26.6 bits (57), Expect = 9.5
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 30 LQNHSGAALGPMLGLCLTLGFSESPQRLFSRNTLPVPDHMAGVMGSIFF 78
LQ A G LG CL L S + L +P+P H+ ++ +++F
Sbjct: 30 LQPQRHRAAGCFLGTCLDLLDSFTLVELMLEGRVPLPAHLRYLLIAVYF 78
>gi|13994236 cat eye syndrome chromosome region, candidate 6 isoform
a [Homo sapiens]
Length = 578
Score = 26.6 bits (57), Expect = 9.5
Identities = 15/49 (30%), Positives = 24/49 (48%)
Query: 30 LQNHSGAALGPMLGLCLTLGFSESPQRLFSRNTLPVPDHMAGVMGSIFF 78
LQ A G LG CL L S + L +P+P H+ ++ +++F
Sbjct: 385 LQPQRHRAAGCFLGTCLDLLDSFTLVELMLEGRVPLPAHLRYLLIAVYF 433
>gi|46852147 mitochondrial isoleucine tRNA synthetase [Homo sapiens]
Length = 1012
Score = 26.6 bits (57), Expect = 9.5
Identities = 17/60 (28%), Positives = 29/60 (48%), Gaps = 4/60 (6%)
Query: 91 SAHLRSTAPTLLPESFTLF----RVSESLGELTHPGTEEDEAAERSLVPPERPSDLWEWL 146
+A R+ T++ FTL ++S+SLG + HP + ++S PP L W+
Sbjct: 641 AARKRAPYKTVIVHGFTLGEKGEKMSKSLGNVIHPDVVVNGGQDQSKEPPYGADVLRWWV 700
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.316 0.133 0.425
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,381,263
Number of Sequences: 37866
Number of extensions: 337545
Number of successful extensions: 849
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 826
Number of HSP's gapped (non-prelim): 35
length of query: 158
length of database: 18,247,518
effective HSP length: 94
effective length of query: 64
effective length of database: 14,688,114
effective search space: 940039296
effective search space used: 940039296
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.