Search of human proteins with 169194829

Search of human proteins with 169194829

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169194829 PREDICTED: family with sequence similarity 170,
member B [Homo sapiens]
         (321 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169194829 PREDICTED: family with sequence similarity 170, mem...   675   0.0  
gi|89031947 PREDICTED: family with sequence similarity 170, memb...   675   0.0  
gi|37550464 PREDICTED: family with sequence similarity 170, memb...   675   0.0  
gi|111548650 family with sequence similarity 170, member A [Homo...   110   2e-24
gi|194097454 hypothetical protein LOC284680 [Homo sapiens]             55   6e-08
gi|239755589 PREDICTED: hypothetical protein [Homo sapiens]            34   0.15 
gi|237858621 polyamine modulated factor 1 binding protein 1 isof...    33   0.34 
gi|237858619 polyamine modulated factor 1 binding protein 1 isof...    33   0.34 
gi|7662302 TBK1 binding protein 1 [Homo sapiens]                       33   0.34 
gi|20336315 BCL2-like 11 isoform 1 [Homo sapiens]                      32   0.58 
gi|205360947 microtubule associated monoxygenase, calponin and L...    32   0.99 
gi|226530313 microtubule associated monoxygenase, calponin and L...    32   0.99 
gi|33286444 mastermind-like 2 [Homo sapiens]                           31   1.3  
gi|62868217 laminin, beta 3 precursor [Homo sapiens]                   31   1.7  
gi|62868215 laminin, beta 3 precursor [Homo sapiens]                   31   1.7  
gi|189083719 laminin, beta 3 precursor [Homo sapiens]                  31   1.7  
gi|50897856 hypothetical protein LOC220965 isoform 1 [Homo sapiens]    31   1.7  
gi|219555642 hypothetical protein LOC220965 isoform 3 [Homo sapi...    31   1.7  
gi|32307166 Rho guanine exchange factor 15 [Homo sapiens]              30   2.2  
gi|239758038 PREDICTED: mucin 3A, cell surface associated, parti...    30   2.9  
gi|148806908 fibronectin type III domain containing 1 [Homo sapi...    30   2.9  
gi|4504487 histidine rich calcium binding protein precursor [Hom...    30   3.7  
gi|21359935 Down syndrome cell adhesion molecule like 1 [Homo sa...    29   4.9  
gi|16418439 WD repeat and FYVE domain containing 2 [Homo sapiens]      29   4.9  
gi|108860697 zinc finger protein 592 [Homo sapiens]                    29   4.9  
gi|39995071 exonuclease 1 isoform b [Homo sapiens]                     29   6.4  
gi|39995069 exonuclease 1 isoform a [Homo sapiens]                     29   6.4  
gi|18491016 exonuclease 1 isoform b [Homo sapiens]                     29   6.4  
gi|7657138 golgi integral membrane protein 4 [Homo sapiens]            29   6.4  
gi|94536868 PR domain containing 15 isoform 2 [Homo sapiens]           29   6.4  

>gi|169194829 PREDICTED: family with sequence similarity 170, member
           B [Homo sapiens]
          Length = 321

 Score =  675 bits (1742), Expect = 0.0
 Identities = 321/321 (100%), Positives = 321/321 (100%)

Query: 1   MGSSVSTLAGASWRPSVQPQPTLTEQLEHRHPGHSFQIMKCYFTDHRGEQSPTDGTTLSL 60
           MGSSVSTLAGASWRPSVQPQPTLTEQLEHRHPGHSFQIMKCYFTDHRGEQSPTDGTTLSL
Sbjct: 1   MGSSVSTLAGASWRPSVQPQPTLTEQLEHRHPGHSFQIMKCYFTDHRGEQSPTDGTTLSL 60

Query: 61  TSPESTEESVEVFWPGTIQREGSSPRPGPAIPREEGLYFAARDRGMRDWSSSPSSESSEY 120
           TSPESTEESVEVFWPGTIQREGSSPRPGPAIPREEGLYFAARDRGMRDWSSSPSSESSEY
Sbjct: 61  TSPESTEESVEVFWPGTIQREGSSPRPGPAIPREEGLYFAARDRGMRDWSSSPSSESSEY 120

Query: 121 QSYSQYQSCCSCMCDEDNAAPQSVCAFYTHVQTVRGVAVAWETEAGFEPVTRKPRIHEAQ 180
           QSYSQYQSCCSCMCDEDNAAPQSVCAFYTHVQTVRGVAVAWETEAGFEPVTRKPRIHEAQ
Sbjct: 121 QSYSQYQSCCSCMCDEDNAAPQSVCAFYTHVQTVRGVAVAWETEAGFEPVTRKPRIHEAQ 180

Query: 181 FIKRQRWNGSSFEMASNTDMRWDLEACKSNCSPEPEDIDLLECCLQELREPPDWLVTTNY 240
           FIKRQRWNGSSFEMASNTDMRWDLEACKSNCSPEPEDIDLLECCLQELREPPDWLVTTNY
Sbjct: 181 FIKRQRWNGSSFEMASNTDMRWDLEACKSNCSPEPEDIDLLECCLQELREPPDWLVTTNY 240

Query: 241 GVRCVACCRVLPSLDALLEHAQHGIREGFSCQIFFEEMLERRRAQGQAHDQQLEEEQSPS 300
           GVRCVACCRVLPSLDALLEHAQHGIREGFSCQIFFEEMLERRRAQGQAHDQQLEEEQSPS
Sbjct: 241 GVRCVACCRVLPSLDALLEHAQHGIREGFSCQIFFEEMLERRRAQGQAHDQQLEEEQSPS 300

Query: 301 DNSECSRPQGEVLSAQQQEKQ 321
           DNSECSRPQGEVLSAQQQEKQ
Sbjct: 301 DNSECSRPQGEVLSAQQQEKQ 321


>gi|89031947 PREDICTED: family with sequence similarity 170, member
           B [Homo sapiens]
          Length = 321

 Score =  675 bits (1742), Expect = 0.0
 Identities = 321/321 (100%), Positives = 321/321 (100%)

Query: 1   MGSSVSTLAGASWRPSVQPQPTLTEQLEHRHPGHSFQIMKCYFTDHRGEQSPTDGTTLSL 60
           MGSSVSTLAGASWRPSVQPQPTLTEQLEHRHPGHSFQIMKCYFTDHRGEQSPTDGTTLSL
Sbjct: 1   MGSSVSTLAGASWRPSVQPQPTLTEQLEHRHPGHSFQIMKCYFTDHRGEQSPTDGTTLSL 60

Query: 61  TSPESTEESVEVFWPGTIQREGSSPRPGPAIPREEGLYFAARDRGMRDWSSSPSSESSEY 120
           TSPESTEESVEVFWPGTIQREGSSPRPGPAIPREEGLYFAARDRGMRDWSSSPSSESSEY
Sbjct: 61  TSPESTEESVEVFWPGTIQREGSSPRPGPAIPREEGLYFAARDRGMRDWSSSPSSESSEY 120

Query: 121 QSYSQYQSCCSCMCDEDNAAPQSVCAFYTHVQTVRGVAVAWETEAGFEPVTRKPRIHEAQ 180
           QSYSQYQSCCSCMCDEDNAAPQSVCAFYTHVQTVRGVAVAWETEAGFEPVTRKPRIHEAQ
Sbjct: 121 QSYSQYQSCCSCMCDEDNAAPQSVCAFYTHVQTVRGVAVAWETEAGFEPVTRKPRIHEAQ 180

Query: 181 FIKRQRWNGSSFEMASNTDMRWDLEACKSNCSPEPEDIDLLECCLQELREPPDWLVTTNY 240
           FIKRQRWNGSSFEMASNTDMRWDLEACKSNCSPEPEDIDLLECCLQELREPPDWLVTTNY
Sbjct: 181 FIKRQRWNGSSFEMASNTDMRWDLEACKSNCSPEPEDIDLLECCLQELREPPDWLVTTNY 240

Query: 241 GVRCVACCRVLPSLDALLEHAQHGIREGFSCQIFFEEMLERRRAQGQAHDQQLEEEQSPS 300
           GVRCVACCRVLPSLDALLEHAQHGIREGFSCQIFFEEMLERRRAQGQAHDQQLEEEQSPS
Sbjct: 241 GVRCVACCRVLPSLDALLEHAQHGIREGFSCQIFFEEMLERRRAQGQAHDQQLEEEQSPS 300

Query: 301 DNSECSRPQGEVLSAQQQEKQ 321
           DNSECSRPQGEVLSAQQQEKQ
Sbjct: 301 DNSECSRPQGEVLSAQQQEKQ 321


>gi|37550464 PREDICTED: family with sequence similarity 170, member
           B [Homo sapiens]
          Length = 321

 Score =  675 bits (1742), Expect = 0.0
 Identities = 321/321 (100%), Positives = 321/321 (100%)

Query: 1   MGSSVSTLAGASWRPSVQPQPTLTEQLEHRHPGHSFQIMKCYFTDHRGEQSPTDGTTLSL 60
           MGSSVSTLAGASWRPSVQPQPTLTEQLEHRHPGHSFQIMKCYFTDHRGEQSPTDGTTLSL
Sbjct: 1   MGSSVSTLAGASWRPSVQPQPTLTEQLEHRHPGHSFQIMKCYFTDHRGEQSPTDGTTLSL 60

Query: 61  TSPESTEESVEVFWPGTIQREGSSPRPGPAIPREEGLYFAARDRGMRDWSSSPSSESSEY 120
           TSPESTEESVEVFWPGTIQREGSSPRPGPAIPREEGLYFAARDRGMRDWSSSPSSESSEY
Sbjct: 61  TSPESTEESVEVFWPGTIQREGSSPRPGPAIPREEGLYFAARDRGMRDWSSSPSSESSEY 120

Query: 121 QSYSQYQSCCSCMCDEDNAAPQSVCAFYTHVQTVRGVAVAWETEAGFEPVTRKPRIHEAQ 180
           QSYSQYQSCCSCMCDEDNAAPQSVCAFYTHVQTVRGVAVAWETEAGFEPVTRKPRIHEAQ
Sbjct: 121 QSYSQYQSCCSCMCDEDNAAPQSVCAFYTHVQTVRGVAVAWETEAGFEPVTRKPRIHEAQ 180

Query: 181 FIKRQRWNGSSFEMASNTDMRWDLEACKSNCSPEPEDIDLLECCLQELREPPDWLVTTNY 240
           FIKRQRWNGSSFEMASNTDMRWDLEACKSNCSPEPEDIDLLECCLQELREPPDWLVTTNY
Sbjct: 181 FIKRQRWNGSSFEMASNTDMRWDLEACKSNCSPEPEDIDLLECCLQELREPPDWLVTTNY 240

Query: 241 GVRCVACCRVLPSLDALLEHAQHGIREGFSCQIFFEEMLERRRAQGQAHDQQLEEEQSPS 300
           GVRCVACCRVLPSLDALLEHAQHGIREGFSCQIFFEEMLERRRAQGQAHDQQLEEEQSPS
Sbjct: 241 GVRCVACCRVLPSLDALLEHAQHGIREGFSCQIFFEEMLERRRAQGQAHDQQLEEEQSPS 300

Query: 301 DNSECSRPQGEVLSAQQQEKQ 321
           DNSECSRPQGEVLSAQQQEKQ
Sbjct: 301 DNSECSRPQGEVLSAQQQEKQ 321


>gi|111548650 family with sequence similarity 170, member A [Homo
           sapiens]
          Length = 329

 Score =  110 bits (274), Expect = 2e-24
 Identities = 69/233 (29%), Positives = 111/233 (47%), Gaps = 10/233 (4%)

Query: 92  PREEGLYFAARDRGMRDWSSSPSSESSEYQSYSQYQSCCSCMCDEDNAAPQSVCAFYTHV 151
           P+ +      ++RG     + P S+     SYS Y++C S +C   N   + +  +Y  V
Sbjct: 80  PQPQSPLAQVQERG----ETPPRSQHVSLSSYSSYKTCVSSLCV--NKEERGMKIYYMQV 133

Query: 152 QTVRGVAVAWETEAGFEPVTRKPRIHEAQFIKRQRWNGSSFEMASNTDMRWDLEACKSNC 211
           Q  +GVAV+WETE   E + ++PR+ E    +  R      ++++   +     + +   
Sbjct: 134 QMNKGVAVSWETEETLESLEKQPRMEEVTLSEVVRVGTPPSDVSTRNLLSDSEPSGEEKE 193

Query: 212 SPEPEDIDLLECCLQELREP----PDWLVTTNYGVRCVACCRVLPSLDALLEHAQHGIRE 267
             E  + D L         P    PDWLVT   G RC+ACCRV  +++AL EH Q GIRE
Sbjct: 194 HEERTESDSLPGSPTVEDTPRAKTPDWLVTMENGFRCMACCRVFTTMEALQEHVQFGIRE 253

Query: 268 GFSCQIFFEEMLERRRAQGQAHDQQLEEEQSPSDNSECSRPQGEVLSAQQQEK 320
           GFSC +F   M +          Q  +EE++ ++  E  +P+ +    Q  E+
Sbjct: 254 GFSCHVFHLTMAQLTGNMESESTQDEQEEENGNEKEEEEKPEAKEEEGQPTEE 306


>gi|194097454 hypothetical protein LOC284680 [Homo sapiens]
          Length = 261

 Score = 55.5 bits (132), Expect = 6e-08
 Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 9/81 (11%)

Query: 207 CKSNCSPE---PEDID------LLECCLQELREPPDWLVTTNYGVRCVACCRVLPSLDAL 257
           C S+ SPE   P +        L     Q++     W      G +CVACCR+ P+LD L
Sbjct: 139 CSSSSSPENTCPREATKKSRHGLDSITSQDILMASRWHPAQQNGYKCVACCRMYPTLDFL 198

Query: 258 LEHAQHGIREGFSCQIFFEEM 278
             H + G REGFSC++++ ++
Sbjct: 199 KSHIKRGFREGFSCKVYYRKL 219


>gi|239755589 PREDICTED: hypothetical protein [Homo sapiens]
          Length = 356

 Score = 34.3 bits (77), Expect = 0.15
 Identities = 31/96 (32%), Positives = 39/96 (40%), Gaps = 23/96 (23%)

Query: 46  HRGEQSPTDGTTLSLTSPESTEESVEVF---WPGTI--------QREGSSPRPGPA---- 90
           H     P  GT   LT   S+E S E+    WPGTI        QR  + P P PA    
Sbjct: 216 HSHTAPPGRGTQRPLTQRHSSESSSELSSSAWPGTIWTSTLSPGQRLPTPPPPDPAALTS 275

Query: 91  --IPRE------EGLYFAARDRGMRDWSSSPSSESS 118
             +P++      EG+  A R R M  W     S +S
Sbjct: 276 WGLPQQQGACVPEGIALALRCRAMGPWEEQNWSATS 311


>gi|237858621 polyamine modulated factor 1 binding protein 1 isoform
           b [Homo sapiens]
          Length = 882

 Score = 33.1 bits (74), Expect = 0.34
 Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 13/151 (8%)

Query: 178 EAQFIKRQRWNGSSFEMASNTDMRWDLEACKSNCSPEPEDIDLLECCLQELREPPDWLVT 237
           E + +  Q+ N     M    D+    E   ++   + +DI +L+C LQEL+     L  
Sbjct: 190 ELEAVSEQKRNIMKDMMKLELDLHGLREETSAHIERKDKDITILQCRLQELQ-----LEF 244

Query: 238 TNYGVRCVACCRVLPSLDALLEHAQHGIREGFSCQIFFEEMLERRRAQGQAHDQQLEE-E 296
           T      +   + L   D +L+  +  + +  +  +  E+ LE+++      +  ++E +
Sbjct: 245 TETQKLTLKKDKFLQEKDEMLQELEKKLTQVQNSLLKKEKELEKQQCMATELEMTVKEAK 304

Query: 297 QSPSDNSECSRPQGEVL-------SAQQQEK 320
           Q  S  +EC   Q EV         A+QQE+
Sbjct: 305 QDKSKEAECKALQAEVQKLKNSLEEAKQQER 335


>gi|237858619 polyamine modulated factor 1 binding protein 1 isoform
           a [Homo sapiens]
          Length = 1007

 Score = 33.1 bits (74), Expect = 0.34
 Identities = 34/151 (22%), Positives = 65/151 (43%), Gaps = 13/151 (8%)

Query: 178 EAQFIKRQRWNGSSFEMASNTDMRWDLEACKSNCSPEPEDIDLLECCLQELREPPDWLVT 237
           E + +  Q+ N     M    D+    E   ++   + +DI +L+C LQEL+     L  
Sbjct: 335 ELEAVSEQKRNIMKDMMKLELDLHGLREETSAHIERKDKDITILQCRLQELQ-----LEF 389

Query: 238 TNYGVRCVACCRVLPSLDALLEHAQHGIREGFSCQIFFEEMLERRRAQGQAHDQQLEE-E 296
           T      +   + L   D +L+  +  + +  +  +  E+ LE+++      +  ++E +
Sbjct: 390 TETQKLTLKKDKFLQEKDEMLQELEKKLTQVQNSLLKKEKELEKQQCMATELEMTVKEAK 449

Query: 297 QSPSDNSECSRPQGEVL-------SAQQQEK 320
           Q  S  +EC   Q EV         A+QQE+
Sbjct: 450 QDKSKEAECKALQAEVQKLKNSLEEAKQQER 480


>gi|7662302 TBK1 binding protein 1 [Homo sapiens]
          Length = 615

 Score = 33.1 bits (74), Expect = 0.34
 Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 10/50 (20%)

Query: 279 LERRR-------AQGQAHDQQLEEEQSPSDNSECSRPQGEVLSAQQQEKQ 321
           LERRR       AQG+A   QL EEQ     +EC R QGE+   Q+   Q
Sbjct: 224 LERRRLEEALEAAQGEARGAQLREEQL---QAECERLQGELKQLQETRAQ 270


>gi|20336315 BCL2-like 11 isoform 1 [Homo sapiens]
          Length = 198

 Score = 32.3 bits (72), Expect = 0.58
 Identities = 29/98 (29%), Positives = 39/98 (39%), Gaps = 13/98 (13%)

Query: 87  PGPAIPREEGLYFAARDRGMRDWSSSPSSESSEYQSYSQYQSCCSCMCDEDNAAPQSVCA 146
           PGP   R     F  R       SS  S  SS Y S+   +S     CD+    P   C 
Sbjct: 70  PGPFATRSPLFIFMRR-------SSLLSRSSSGYFSFDTDRSPAPMSCDKSTQTPSPPCQ 122

Query: 147 FYTHVQTVRGVAVAWETEAGFEPVTRKPRIHEAQFIKR 184
            + H  +    A+A   +A  EP   +P I  AQ ++R
Sbjct: 123 AFNHYLS----AMASMRQA--EPADMRPEIWIAQELRR 154


>gi|205360947 microtubule associated monoxygenase, calponin and LIM
           domain containing 1 isoform 1 [Homo sapiens]
          Length = 1067

 Score = 31.6 bits (70), Expect = 0.99
 Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 1/77 (1%)

Query: 28  EHRHPGHSFQIMKCYFTDHRGEQSPTDGTTLSLTSPESTEESVEVFWPGTIQREGSSPRP 87
           +H   GH + +     TDH+ E S     +  L +P        +  P T  +EG+ P P
Sbjct: 738 QHPGDGHFYCLQHLPQTDHKAEGSDRGPESPELPTPSENSMPPGLSTP-TASQEGAGPVP 796

Query: 88  GPAIPREEGLYFAARDR 104
            P+ P    +  ++ +R
Sbjct: 797 DPSQPTRRQIRLSSPER 813


>gi|226530313 microtubule associated monoxygenase, calponin and LIM
           domain containing 1 isoform 2 [Homo sapiens]
          Length = 981

 Score = 31.6 bits (70), Expect = 0.99
 Identities = 19/77 (24%), Positives = 33/77 (42%), Gaps = 1/77 (1%)

Query: 28  EHRHPGHSFQIMKCYFTDHRGEQSPTDGTTLSLTSPESTEESVEVFWPGTIQREGSSPRP 87
           +H   GH + +     TDH+ E S     +  L +P        +  P T  +EG+ P P
Sbjct: 652 QHPGDGHFYCLQHLPQTDHKAEGSDRGPESPELPTPSENSMPPGLSTP-TASQEGAGPVP 710

Query: 88  GPAIPREEGLYFAARDR 104
            P+ P    +  ++ +R
Sbjct: 711 DPSQPTRRQIRLSSPER 727


>gi|33286444 mastermind-like 2 [Homo sapiens]
          Length = 1156

 Score = 31.2 bits (69), Expect = 1.3
 Identities = 21/74 (28%), Positives = 42/74 (56%), Gaps = 5/74 (6%)

Query: 250 VLPSLD--ALLEHAQHGIREGFSCQIFFEEMLERRRAQGQAHDQQLEEEQSPSDNSECSR 307
           VLPS +  +LL + Q   ++    Q   ++  ++++ Q Q   QQ +++Q  S +++  +
Sbjct: 574 VLPSQNKPSLLHYTQQQQQQQQQQQ---QQQQQQQQQQQQQQQQQQQQQQQSSISAQQQQ 630

Query: 308 PQGEVLSAQQQEKQ 321
            Q   +SAQQQ++Q
Sbjct: 631 QQQSSISAQQQQQQ 644


>gi|62868217 laminin, beta 3 precursor [Homo sapiens]
          Length = 1172

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 30/122 (24%), Positives = 41/122 (33%), Gaps = 13/122 (10%)

Query: 127 QSCCSCMCDEDNAAPQSVCAFYTHVQTVRGVAVAWETEAGFEPVTRKPRIHEAQFIKRQR 186
           ++C SC CD D A P + C        V G  V  E   G      KP      +   Q 
Sbjct: 374 ETCISCECDPDGAVPGAPC------DPVTGQCVCKEHVQGERCDLCKPGFTGLTYANPQG 427

Query: 187 WNGSSFE-MASNTDMRWDLEACKSNCSPEPEDIDLLECCLQELREPPDWLVTTNYGVRCV 245
            +      + S  DM  D E+ +  C P        +C       P  W + +  G    
Sbjct: 428 CHRCDCNILGSRRDMPCDEESGRCLCLPNVVGPKCDQCA------PYHWKLASGQGCEPC 481

Query: 246 AC 247
           AC
Sbjct: 482 AC 483


>gi|62868215 laminin, beta 3 precursor [Homo sapiens]
          Length = 1172

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 30/122 (24%), Positives = 41/122 (33%), Gaps = 13/122 (10%)

Query: 127 QSCCSCMCDEDNAAPQSVCAFYTHVQTVRGVAVAWETEAGFEPVTRKPRIHEAQFIKRQR 186
           ++C SC CD D A P + C        V G  V  E   G      KP      +   Q 
Sbjct: 374 ETCISCECDPDGAVPGAPC------DPVTGQCVCKEHVQGERCDLCKPGFTGLTYANPQG 427

Query: 187 WNGSSFE-MASNTDMRWDLEACKSNCSPEPEDIDLLECCLQELREPPDWLVTTNYGVRCV 245
            +      + S  DM  D E+ +  C P        +C       P  W + +  G    
Sbjct: 428 CHRCDCNILGSRRDMPCDEESGRCLCLPNVVGPKCDQCA------PYHWKLASGQGCEPC 481

Query: 246 AC 247
           AC
Sbjct: 482 AC 483


>gi|189083719 laminin, beta 3 precursor [Homo sapiens]
          Length = 1172

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 30/122 (24%), Positives = 41/122 (33%), Gaps = 13/122 (10%)

Query: 127 QSCCSCMCDEDNAAPQSVCAFYTHVQTVRGVAVAWETEAGFEPVTRKPRIHEAQFIKRQR 186
           ++C SC CD D A P + C        V G  V  E   G      KP      +   Q 
Sbjct: 374 ETCISCECDPDGAVPGAPC------DPVTGQCVCKEHVQGERCDLCKPGFTGLTYANPQG 427

Query: 187 WNGSSFE-MASNTDMRWDLEACKSNCSPEPEDIDLLECCLQELREPPDWLVTTNYGVRCV 245
            +      + S  DM  D E+ +  C P        +C       P  W + +  G    
Sbjct: 428 CHRCDCNILGSRRDMPCDEESGRCLCLPNVVGPKCDQCA------PYHWKLASGQGCEPC 481

Query: 246 AC 247
           AC
Sbjct: 482 AC 483


>gi|50897856 hypothetical protein LOC220965 isoform 1 [Homo sapiens]
          Length = 585

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 20/105 (19%)

Query: 99  FAARDRGMRDWSSSPSSESSEYQSYSQYQSCCSCMCDEDNAAPQSVCAFYTHVQTVRGVA 158
           F+   R   D  S+PS  S++     +  S CSC    D   PQ++     H+Q+++   
Sbjct: 244 FSQSQRFNLDPESAPSPPSTQQFMMPRSSSRCSC---GDGKEPQTITQLTKHIQSLK--- 297

Query: 159 VAWETEAGFEPVTRKPRIHEAQFIKRQRWNGSSFEMASNTD-MRW 202
                        RK R  E +F + +++  S  +  SN + ++W
Sbjct: 298 -------------RKIRKFEEKFEQEKKYRPSHGDKTSNPEVLKW 329


>gi|219555642 hypothetical protein LOC220965 isoform 3 [Homo
           sapiens]
          Length = 502

 Score = 30.8 bits (68), Expect = 1.7
 Identities = 25/105 (23%), Positives = 45/105 (42%), Gaps = 20/105 (19%)

Query: 99  FAARDRGMRDWSSSPSSESSEYQSYSQYQSCCSCMCDEDNAAPQSVCAFYTHVQTVRGVA 158
           F+   R   D  S+PS  S++     +  S CSC    D   PQ++     H+Q+++   
Sbjct: 161 FSQSQRFNLDPESAPSPPSTQQFMMPRSSSRCSC---GDGKEPQTITQLTKHIQSLK--- 214

Query: 159 VAWETEAGFEPVTRKPRIHEAQFIKRQRWNGSSFEMASNTD-MRW 202
                        RK R  E +F + +++  S  +  SN + ++W
Sbjct: 215 -------------RKIRKFEEKFEQEKKYRPSHGDKTSNPEVLKW 246


>gi|32307166 Rho guanine exchange factor 15 [Homo sapiens]
          Length = 841

 Score = 30.4 bits (67), Expect = 2.2
 Identities = 29/109 (26%), Positives = 40/109 (36%), Gaps = 24/109 (22%)

Query: 75  PGTIQR------EGSSPRPGPAIPREEGLYFAARDRGMRD--WSSSPSSESSEYQSYSQY 126
           PGT++R       G+  R   A   E GL   A   G R+   + S S E+    +    
Sbjct: 147 PGTVRRLAGRFEGGAEGRAQDADAPEPGLQARADVNGEREAPLTGSGSQENGAPDAGLAC 206

Query: 127 QSCCSCMCDEDNAAPQSVCAFYTHVQTVRGVAVAWETEAGFEPVTRKPR 175
             CC C+C                  T  G+ + W    G+E V R PR
Sbjct: 207 PPCCPCVCHT----------------TRPGLELRWVPVGGYEEVPRVPR 239


>gi|239758038 PREDICTED: mucin 3A, cell surface associated, partial
           [Homo sapiens]
          Length = 909

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 32/134 (23%), Positives = 46/134 (34%), Gaps = 9/134 (6%)

Query: 3   SSVSTLAGASWRPSVQPQPTLTEQLEHRHPGHSFQIMKCYFTDHRGEQSPTDGTTLSLTS 62
           S  +T   +S  PS     T TE   H  PG +  I     T H         +T S TS
Sbjct: 170 SITTTETPSSSTPSFSSSITTTETTSHSTPGFTSSITTTETTSH---------STPSFTS 220

Query: 63  PESTEESVEVFWPGTIQREGSSPRPGPAIPREEGLYFAARDRGMRDWSSSPSSESSEYQS 122
             +T E+     P       +S  P  + P    L    +       S + S  ++E  S
Sbjct: 221 SITTTETTSHDTPSFTSSITTSETPSHSTPSSTSLITTTKTTSHSTPSFTSSITTTETTS 280

Query: 123 YSQYQSCCSCMCDE 136
           +S +    S    E
Sbjct: 281 HSAHSFTSSITTTE 294


>gi|148806908 fibronectin type III domain containing 1 [Homo
           sapiens]
          Length = 1894

 Score = 30.0 bits (66), Expect = 2.9
 Identities = 28/124 (22%), Positives = 47/124 (37%), Gaps = 18/124 (14%)

Query: 10  GASWRPSVQPQPTLTEQLEHRHPGHSFQIMKCYFTDHRGE--QSPTDGTTLSLTSPESTE 67
           G   +PS  PQ T+  +   R P HS    K     H  E  + P   T ++   P S+ 
Sbjct: 840 GPRLQPSSSPQSTVPSRAHPRVPSHSDSHPKLSSGIHGDEEDEKPLPATVVNDHVPSSSR 899

Query: 68  ESVEVFWPGTIQREGSSPRPGPAIPREEGLYFAARDRGMRDWSSSPSSESSEYQSYSQYQ 127
           + +   W    +    SP+ G ++ R+E +              +P S  ++     +Y 
Sbjct: 900 QPISRGWEDLRR----SPQRGASLHRKEPI------------PENPKSTGADTHPQGKYS 943

Query: 128 SCCS 131
           S  S
Sbjct: 944 SLAS 947


>gi|4504487 histidine rich calcium binding protein precursor [Homo
           sapiens]
          Length = 699

 Score = 29.6 bits (65), Expect = 3.7
 Identities = 31/107 (28%), Positives = 38/107 (35%), Gaps = 20/107 (18%)

Query: 45  DHRGEQSPTDGTTLSLTSPESTEESVEVFWPGTIQREGSSPR----PGPAIPREEGLYFA 100
           + R E+    G  LS    E  EE  E         E   PR    P P   REE    +
Sbjct: 549 EERREERAEVGAPLSPDHSEEEEEEEEGL-------EEDEPRFTIIPNPLDRREEAGGAS 601

Query: 101 ARDRGMRDWSSSPSSESSEYQ--SYSQYQSCC-------SCMCDEDN 138
           + +    D     + E   YQ  S   Y S C       SC CDE+N
Sbjct: 602 SEEESGEDTGPQDAQEYGNYQPGSLCGYCSFCNRCTECESCHCDEEN 648


>gi|21359935 Down syndrome cell adhesion molecule like 1 [Homo
            sapiens]
          Length = 2113

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 22/68 (32%), Positives = 31/68 (45%), Gaps = 8/68 (11%)

Query: 23   LTEQLEHRHPGHSFQIMKCYFTDHRGEQSPTDGTTLSLTSPESTEESVEVFWPGTIQREG 82
            L EQL+H      F+I +C+ +D   +Q  T GT  +  S  S     E   PG  +   
Sbjct: 1880 LEEQLQHA----KFEITECFISDSSSDQM-TTGTNENADSMTSMSTPSE---PGICRFTA 1931

Query: 83   SSPRPGPA 90
            S P+P  A
Sbjct: 1932 SPPKPQDA 1939


>gi|16418439 WD repeat and FYVE domain containing 2 [Homo sapiens]
          Length = 400

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 5/45 (11%)

Query: 91  IPREEGLYFAARDRGMRDWSSSPSSESSEY--QSYSQYQSCCSCM 133
           +P+EEG+   + DR +R W      +S +Y    Y    S CSCM
Sbjct: 33  VPKEEGVISVSEDRTVRVWL---KRDSGQYWPSVYHAMPSPCSCM 74


>gi|108860697 zinc finger protein 592 [Homo sapiens]
          Length = 1267

 Score = 29.3 bits (64), Expect = 4.9
 Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 5/76 (6%)

Query: 232 PDWLVTTNYGVRCVACCRVLPSLDALLEHAQHGIR--EGFSCQIFFEEMLERRRAQGQAH 289
           PD +    Y ++C+ C + +     L  H Q      EG +CQ+   +ML   +    AH
Sbjct: 701 PDPVRLIRYSIKCLECHKQMRDYMVLAAHFQRTTEETEGLTCQVC--QMLLPNQCSFCAH 758

Query: 290 DQQLEEEQSPSDNSEC 305
            Q++   +SP    EC
Sbjct: 759 -QRIHAHKSPYCCPEC 773


>gi|39995071 exonuclease 1 isoform b [Homo sapiens]
          Length = 846

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 29/137 (21%), Positives = 49/137 (35%), Gaps = 14/137 (10%)

Query: 24  TEQLEHRH-PGHSFQIMKCYFTDHRGEQSPTDGTTLSLTSPESTEESVEVFWPGTIQREG 82
           ++ + + H PG         FTD       +   T +++ P          W G +    
Sbjct: 560 SDDIPNNHIPGDHIPDKATVFTDEESYSFESSKFTRTISPPTLGTLRSCFSWSGGLGDFS 619

Query: 83  SSPRPGPAIP-----REEGLYFAARDRGMRDWSSSPSSESSEYQSYSQYQSCCSCMCDE- 136
            +P P P+       R+     +  +  M D S   S ESS+ +S+   +  CS    E 
Sbjct: 620 RTPSPSPSTALQQFRRKSDSPTSLPENNMSDVSQLKSEESSDDESHPLREGACSSQSQES 679

Query: 137 -------DNAAPQSVCA 146
                   NA+  S C+
Sbjct: 680 GEFSLQSSNASKLSQCS 696


>gi|39995069 exonuclease 1 isoform a [Homo sapiens]
          Length = 803

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 29/137 (21%), Positives = 49/137 (35%), Gaps = 14/137 (10%)

Query: 24  TEQLEHRH-PGHSFQIMKCYFTDHRGEQSPTDGTTLSLTSPESTEESVEVFWPGTIQREG 82
           ++ + + H PG         FTD       +   T +++ P          W G +    
Sbjct: 560 SDDIPNNHIPGDHIPDKATVFTDEESYSFESSKFTRTISPPTLGTLRSCFSWSGGLGDFS 619

Query: 83  SSPRPGPAIP-----REEGLYFAARDRGMRDWSSSPSSESSEYQSYSQYQSCCSCMCDE- 136
            +P P P+       R+     +  +  M D S   S ESS+ +S+   +  CS    E 
Sbjct: 620 RTPSPSPSTALQQFRRKSDSPTSLPENNMSDVSQLKSEESSDDESHPLREGACSSQSQES 679

Query: 137 -------DNAAPQSVCA 146
                   NA+  S C+
Sbjct: 680 GEFSLQSSNASKLSQCS 696


>gi|18491016 exonuclease 1 isoform b [Homo sapiens]
          Length = 846

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 29/137 (21%), Positives = 49/137 (35%), Gaps = 14/137 (10%)

Query: 24  TEQLEHRH-PGHSFQIMKCYFTDHRGEQSPTDGTTLSLTSPESTEESVEVFWPGTIQREG 82
           ++ + + H PG         FTD       +   T +++ P          W G +    
Sbjct: 560 SDDIPNNHIPGDHIPDKATVFTDEESYSFESSKFTRTISPPTLGTLRSCFSWSGGLGDFS 619

Query: 83  SSPRPGPAIP-----REEGLYFAARDRGMRDWSSSPSSESSEYQSYSQYQSCCSCMCDE- 136
            +P P P+       R+     +  +  M D S   S ESS+ +S+   +  CS    E 
Sbjct: 620 RTPSPSPSTALQQFRRKSDSPTSLPENNMSDVSQLKSEESSDDESHPLREGACSSQSQES 679

Query: 137 -------DNAAPQSVCA 146
                   NA+  S C+
Sbjct: 680 GEFSLQSSNASKLSQCS 696


>gi|7657138 golgi integral membrane protein 4 [Homo sapiens]
          Length = 696

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 4/69 (5%)

Query: 257 LLE-HAQHGIREGFSCQIFFEEMLERRRAQGQAHDQQLEEEQSPSDNSEC---SRPQGEV 312
           LLE HA+  +       I F+   E +  Q +   QQ+EE Q   ++ E     R QG +
Sbjct: 384 LLEGHARAEVYPSAKPMIKFQSPYEEQLEQQRLAVQQVEEAQQLREHQEALHQQRLQGHL 443

Query: 313 LSAQQQEKQ 321
           L  Q+Q++Q
Sbjct: 444 LRQQEQQQQ 452


>gi|94536868 PR domain containing 15 isoform 2 [Homo sapiens]
          Length = 1178

 Score = 28.9 bits (63), Expect = 6.4
 Identities = 26/129 (20%), Positives = 54/129 (41%), Gaps = 18/129 (13%)

Query: 17   VQPQPTLTEQLEHRHPGHSFQIMKCYFTDHRGEQSPTDGTTLSLTSPESTEESVEVFWPG 76
            V  + +++  +  +HP      ++    DH  E +  D +++ +  PE T E        
Sbjct: 905  VSTRASMSRHMRRKHP--EVLAVRIDDLDHLPETTTIDASSIGIVQPELTLE-------- 954

Query: 77   TIQREGSSPRPGPAIPREEGLYFAARDRGMRDWSSSPSSESSEYQSYSQYQS-CCSCMCD 135
              Q + +  + G A  R        R +   + + +P  E + +  YS+ ++     + D
Sbjct: 955  --QEDLAEGKHGKAAKRSH-----KRKQKPEEEAGAPVPEDATFSEYSEKETEFTGSVGD 1007

Query: 136  EDNAAPQSV 144
            E N+A QS+
Sbjct: 1008 ETNSAVQSI 1016


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.315    0.129    0.404 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,283,182
Number of Sequences: 37866
Number of extensions: 784506
Number of successful extensions: 2924
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 2902
Number of HSP's gapped (non-prelim): 51
length of query: 321
length of database: 18,247,518
effective HSP length: 102
effective length of query: 219
effective length of database: 14,385,186
effective search space: 3150355734
effective search space used: 3150355734
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.