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Search of human proteins with 169190542
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169190542 PREDICTED: hypothetical protein [Homo sapiens]
(308 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169190542 PREDICTED: hypothetical protein [Homo sapiens] 613 e-176
gi|59814411 hypothetical protein LOC253725 [Homo sapiens] 613 e-176
gi|54124343 hypothetical protein LOC387680 [Homo sapiens] 607 e-174
gi|154090959 hypothetical protein LOC55747 [Homo sapiens] 604 e-173
gi|19924099 synapsin I isoform Ia [Homo sapiens] 40 0.003
gi|11056038 visual system homeobox 1 isoform a [Homo sapiens] 38 0.013
gi|33383235 minichromosome maintenance complex component 10 isof... 37 0.022
gi|33383237 minichromosome maintenance complex component 10 isof... 37 0.022
gi|65287717 eukaryotic translation initiation factor 2 alpha kin... 37 0.029
gi|31652264 RNA binding motif protein 26 [Homo sapiens] 37 0.029
gi|54112403 chromodomain helicase DNA binding protein 7 [Homo sa... 36 0.038
gi|40806216 visual system homeobox 1 isoform b [Homo sapiens] 36 0.038
gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo sa... 36 0.049
gi|47519562 reticulon 4 isoform E [Homo sapiens] 35 0.064
gi|24431935 reticulon 4 isoform A [Homo sapiens] 35 0.064
gi|84043963 eukaryotic translation initiation factor 5B [Homo sa... 35 0.064
gi|126723390 ankyrin repeat domain 24 [Homo sapiens] 35 0.064
gi|199559532 Abelson helper integration site 1 isoform b [Homo s... 35 0.11
gi|199559490 Abelson helper integration site 1 isoform a [Homo s... 35 0.11
gi|199559438 Abelson helper integration site 1 isoform a [Homo s... 35 0.11
gi|31542701 Abelson helper integration site 1 isoform a [Homo sa... 35 0.11
gi|134244585 putative neuronal cell adhesion molecule [Homo sapi... 34 0.19
gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens] 33 0.32
gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens] 33 0.32
gi|4504733 insulin receptor substrate 4 [Homo sapiens] 33 0.42
gi|69354671 ATP-binding cassette, sub-family F, member 1 isoform... 33 0.42
gi|112382257 InaD-like [Homo sapiens] 33 0.42
gi|24497554 homeobox A13 [Homo sapiens] 32 0.54
gi|7657269 PDS5, regulator of cohesion maintenance, homolog B [H... 32 0.54
gi|156671219 epsin 2 isoform c [Homo sapiens] 32 0.54
>gi|169190542 PREDICTED: hypothetical protein [Homo sapiens]
Length = 308
Score = 613 bits (1582), Expect = e-176
Identities = 308/308 (100%), Positives = 308/308 (100%)
Query: 1 MRGKRRPQTRAARRLAAQESSEAEDMSVPRGPIAQWADGAISPNGHRPQLRAASGEDSTE 60
MRGKRRPQTRAARRLAAQESSEAEDMSVPRGPIAQWADGAISPNGHRPQLRAASGEDSTE
Sbjct: 1 MRGKRRPQTRAARRLAAQESSEAEDMSVPRGPIAQWADGAISPNGHRPQLRAASGEDSTE 60
Query: 61 EALAAAAAPWEGGPVPGVDTSPFAKSLGHSRGEADLFDSGDIFSTGTGSQSVERTKPKAK 120
EALAAAAAPWEGGPVPGVDTSPFAKSLGHSRGEADLFDSGDIFSTGTGSQSVERTKPKAK
Sbjct: 61 EALAAAAAPWEGGPVPGVDTSPFAKSLGHSRGEADLFDSGDIFSTGTGSQSVERTKPKAK 120
Query: 121 IAENPANPPVGGKAKSPMFPALGEASSDDDLFQSAKPKPAKKTNPFPLLEDEDDLFTDQK 180
IAENPANPPVGGKAKSPMFPALGEASSDDDLFQSAKPKPAKKTNPFPLLEDEDDLFTDQK
Sbjct: 121 IAENPANPPVGGKAKSPMFPALGEASSDDDLFQSAKPKPAKKTNPFPLLEDEDDLFTDQK 180
Query: 181 VKKNETKSSSQQDVILTTQDIFEDDIFATEAIKPSQKTREKEKTLESNLFDDNIDIFADL 240
VKKNETKSSSQQDVILTTQDIFEDDIFATEAIKPSQKTREKEKTLESNLFDDNIDIFADL
Sbjct: 181 VKKNETKSSSQQDVILTTQDIFEDDIFATEAIKPSQKTREKEKTLESNLFDDNIDIFADL 240
Query: 241 TVKPKEKSKKKVEAKSIFDDDMDDIFSTGIQAKTTKPKSRSAQAAPEPRFEHKVSNIFDD 300
TVKPKEKSKKKVEAKSIFDDDMDDIFSTGIQAKTTKPKSRSAQAAPEPRFEHKVSNIFDD
Sbjct: 241 TVKPKEKSKKKVEAKSIFDDDMDDIFSTGIQAKTTKPKSRSAQAAPEPRFEHKVSNIFDD 300
Query: 301 PLNAFGGQ 308
PLNAFGGQ
Sbjct: 301 PLNAFGGQ 308
>gi|59814411 hypothetical protein LOC253725 [Homo sapiens]
Length = 1318
Score = 613 bits (1582), Expect = e-176
Identities = 308/308 (100%), Positives = 308/308 (100%)
Query: 1 MRGKRRPQTRAARRLAAQESSEAEDMSVPRGPIAQWADGAISPNGHRPQLRAASGEDSTE 60
MRGKRRPQTRAARRLAAQESSEAEDMSVPRGPIAQWADGAISPNGHRPQLRAASGEDSTE
Sbjct: 1011 MRGKRRPQTRAARRLAAQESSEAEDMSVPRGPIAQWADGAISPNGHRPQLRAASGEDSTE 1070
Query: 61 EALAAAAAPWEGGPVPGVDTSPFAKSLGHSRGEADLFDSGDIFSTGTGSQSVERTKPKAK 120
EALAAAAAPWEGGPVPGVDTSPFAKSLGHSRGEADLFDSGDIFSTGTGSQSVERTKPKAK
Sbjct: 1071 EALAAAAAPWEGGPVPGVDTSPFAKSLGHSRGEADLFDSGDIFSTGTGSQSVERTKPKAK 1130
Query: 121 IAENPANPPVGGKAKSPMFPALGEASSDDDLFQSAKPKPAKKTNPFPLLEDEDDLFTDQK 180
IAENPANPPVGGKAKSPMFPALGEASSDDDLFQSAKPKPAKKTNPFPLLEDEDDLFTDQK
Sbjct: 1131 IAENPANPPVGGKAKSPMFPALGEASSDDDLFQSAKPKPAKKTNPFPLLEDEDDLFTDQK 1190
Query: 181 VKKNETKSSSQQDVILTTQDIFEDDIFATEAIKPSQKTREKEKTLESNLFDDNIDIFADL 240
VKKNETKSSSQQDVILTTQDIFEDDIFATEAIKPSQKTREKEKTLESNLFDDNIDIFADL
Sbjct: 1191 VKKNETKSSSQQDVILTTQDIFEDDIFATEAIKPSQKTREKEKTLESNLFDDNIDIFADL 1250
Query: 241 TVKPKEKSKKKVEAKSIFDDDMDDIFSTGIQAKTTKPKSRSAQAAPEPRFEHKVSNIFDD 300
TVKPKEKSKKKVEAKSIFDDDMDDIFSTGIQAKTTKPKSRSAQAAPEPRFEHKVSNIFDD
Sbjct: 1251 TVKPKEKSKKKVEAKSIFDDDMDDIFSTGIQAKTTKPKSRSAQAAPEPRFEHKVSNIFDD 1310
Query: 301 PLNAFGGQ 308
PLNAFGGQ
Sbjct: 1311 PLNAFGGQ 1318
Score = 34.3 bits (77), Expect = 0.14
Identities = 43/192 (22%), Positives = 83/192 (43%), Gaps = 26/192 (13%)
Query: 92 GEADLFDSGDIFSTGTGSQSVERTKPKAKIAENPANPPVGGKAKSPMFPALGEASSDDDL 151
G+ D+F + + S Q E+ P+ ++P PP G + DDD
Sbjct: 414 GDTDVFGAASVPSLKE-PQKPEQPTPR----KSPYGPPPTGLFDDD------DGDDDDDF 462
Query: 152 FQSAKPKPAK----KTNPFPLLEDEDDLFTDQKVKKNE-TKSSSQQDVILTTQDIFEDDI 206
F + KP+K ++ ++E DLF ++ V E T S + ++ + + +
Sbjct: 463 FSAPHSKPSKTRKVQSTADIFGDEEGDLFKEKAVASPEATVSQTDENKARAEKKV---TL 519
Query: 207 FATEAIKPSQKTREKEKTLESNLFDDNIDIFADLTVKPKEKSK----KKVEAKSIFDD-D 261
++ +KPS +T+ ++ +D+ D+F+ + + + K + S+FDD D
Sbjct: 520 SYSKNLKPSSETKTQKGLFSDE--EDSEDLFSSQSASNLKGASLLPGKLPTSVSLFDDED 577
Query: 262 MDDIFSTGIQAK 273
+D G AK
Sbjct: 578 EEDNLFGGTAAK 589
Score = 33.9 bits (76), Expect = 0.19
Identities = 46/195 (23%), Positives = 74/195 (37%), Gaps = 28/195 (14%)
Query: 96 LFDSGDIFSTGTGSQSVERTKPKAKIAENPANPPVGGKAKSPMFP-ALGEASSDDDLFQS 154
LF + G +SV++ AK + V K + + E DLF S
Sbjct: 724 LFSDEEEKEAQLGVKSVDKKVESAKESLKFGRTDVAESEKEGLLTRSAQETVKHSDLFSS 783
Query: 155 AKP-----KPAKKTNPFPLLEDEDDLFTDQKV---KKNETKSSSQQDVILTTQDIFEDDI 206
+ P KP KT L ++E+D DQ + + E D + +F+D
Sbjct: 784 SSPWDKGTKPRTKT-VLSLFDEEEDKMEDQNIIQAPQKEVGKGCDPDAHPKSTGVFQD-- 840
Query: 207 FATEAIKPSQKTREKEKTLESNLFDDNIDIFADLTVKPKEKSKKKVEAKSIFDDDM-DDI 265
E + S K ++ D ++D+FA K+ + S+F DD DD+
Sbjct: 841 ---EELLFSHKLQKDN--------DPDVDLFAGT----KKTKLLEPSVGSLFGDDEDDDL 885
Query: 266 FSTGIQAKTTKPKSR 280
FS+ + K R
Sbjct: 886 FSSAKSQPLVQEKKR 900
Score = 33.1 bits (74), Expect = 0.32
Identities = 59/265 (22%), Positives = 99/265 (37%), Gaps = 48/265 (18%)
Query: 84 AKSLGHSRGEADLFDSGDIFSTGTGSQSVERTKPKAKIAENPANPPVGGKAKSPMFPALG 143
A L + A LF S + ++ SQ+ + ++K + +AK+ +L
Sbjct: 605 ASELSKKKASALLFSSDEEWNI-PASQTHLASDSRSKGEPRDSGTLQSQEAKAVKKTSLF 663
Query: 144 EASSDDDLFQSAKPKPAKKTNPFPLLEDEDD----LF------TDQKVKKNETKSSS--- 190
E +DDLF AK K L ED+ D LF KK ET S +
Sbjct: 664 EEDKEDDLFAIAKDSQKKTQRVSLLFEDDVDSGGSLFGSPPTSVPPATKKKETVSEAPPL 723
Query: 191 ------QQDVILTTQDIFEDDIFATEAIK-------PSQK----TREKEKTLESNLFDDN 233
+++ L + + + A E++K S+K TR ++T++ +
Sbjct: 724 LFSDEEEKEAQLGVKSVDKKVESAKESLKFGRTDVAESEKEGLLTRSAQETVKHS----- 778
Query: 234 IDIFADLTVKPKEKSKKKVEAKSIFDDDMDDIFSTGIQAKTTK-----------PKSRSA 282
D+F+ + K + S+FD++ D + I K PKS
Sbjct: 779 -DLFSSSSPWDKGTKPRTKTVLSLFDEEEDKMEDQNIIQAPQKEVGKGCDPDAHPKSTGV 837
Query: 283 QAAPEPRFEHKVSNIFDDPLNAFGG 307
E F HK+ D ++ F G
Sbjct: 838 FQDEELLFSHKLQKDNDPDVDLFAG 862
>gi|54124343 hypothetical protein LOC387680 [Homo sapiens]
Length = 1341
Score = 607 bits (1565), Expect = e-174
Identities = 304/308 (98%), Positives = 306/308 (99%)
Query: 1 MRGKRRPQTRAARRLAAQESSEAEDMSVPRGPIAQWADGAISPNGHRPQLRAASGEDSTE 60
MRGKRRPQTRAARRLAAQESSE EDMSVPRGPIAQWADGAISPNGHRPQLRAASGEDSTE
Sbjct: 1034 MRGKRRPQTRAARRLAAQESSETEDMSVPRGPIAQWADGAISPNGHRPQLRAASGEDSTE 1093
Query: 61 EALAAAAAPWEGGPVPGVDTSPFAKSLGHSRGEADLFDSGDIFSTGTGSQSVERTKPKAK 120
EALAAAAAPWEGGPVPGVD SPFAKSLGHSRGEADLFDSGDIFSTGTGSQSVERTKPKAK
Sbjct: 1094 EALAAAAAPWEGGPVPGVDRSPFAKSLGHSRGEADLFDSGDIFSTGTGSQSVERTKPKAK 1153
Query: 121 IAENPANPPVGGKAKSPMFPALGEASSDDDLFQSAKPKPAKKTNPFPLLEDEDDLFTDQK 180
IAENPANPPVGGKAKSPMFPALGEASSDDDLFQSAKPKPAKKTNPFPLLEDEDDLFTDQK
Sbjct: 1154 IAENPANPPVGGKAKSPMFPALGEASSDDDLFQSAKPKPAKKTNPFPLLEDEDDLFTDQK 1213
Query: 181 VKKNETKSSSQQDVILTTQDIFEDDIFATEAIKPSQKTREKEKTLESNLFDDNIDIFADL 240
VKKNETKS+SQQDVILTTQDIFEDDIFATEAIKPSQKTREKEKTLESNLFDDNIDIFADL
Sbjct: 1214 VKKNETKSNSQQDVILTTQDIFEDDIFATEAIKPSQKTREKEKTLESNLFDDNIDIFADL 1273
Query: 241 TVKPKEKSKKKVEAKSIFDDDMDDIFSTGIQAKTTKPKSRSAQAAPEPRFEHKVSNIFDD 300
TVKPKEKSKKKVEAKSIFDDDMDDIFS+GIQAKTTKPKSRSAQAAPEPRFEHKVSNIFDD
Sbjct: 1274 TVKPKEKSKKKVEAKSIFDDDMDDIFSSGIQAKTTKPKSRSAQAAPEPRFEHKVSNIFDD 1333
Query: 301 PLNAFGGQ 308
PLNAFGGQ
Sbjct: 1334 PLNAFGGQ 1341
Score = 35.8 bits (81), Expect = 0.049
Identities = 43/185 (23%), Positives = 79/185 (42%), Gaps = 24/185 (12%)
Query: 101 DIFSTGTGSQSVERTKPKAKIA-ENPANPPVGGKAKSPMFPALGEASSDDDLFQSAKPKP 159
D+F + E KP+ ++P PP G + DDD F + KP
Sbjct: 417 DVFGAASVPSMKEPQKPEQPTPRKSPYGPPPTGLFDDD------DGDDDDDFFSAPHSKP 470
Query: 160 AK----KTNPFPLLEDEDDLFTDQKVKKNE-TKSSSQQDVILTTQDIFEDDIFATEAIKP 214
+K ++ ++E DLF ++ V E T S + ++ + + + +++ +KP
Sbjct: 471 SKTGKVQSTADIFGDEEGDLFKEKAVASPEATVSQTDENKARAEKKV---TLSSSKNLKP 527
Query: 215 SQKTREKEKTLESNLFDDNIDIFADLTVKPKEKSKKKVEAK-----SIFDD-DMDDIFST 268
S +T+ ++ +D+ D+F+ + K K + K S+FDD D +D
Sbjct: 528 SSETKTQKGLFSDE--EDSEDLFSSQSAS-KLKGASLLPGKLPTLVSLFDDEDEEDNLFG 584
Query: 269 GIQAK 273
G AK
Sbjct: 585 GTAAK 589
Score = 33.9 bits (76), Expect = 0.19
Identities = 46/195 (23%), Positives = 74/195 (37%), Gaps = 28/195 (14%)
Query: 96 LFDSGDIFSTGTGSQSVERTKPKAKIAENPANPPVGGKAKSPMFP-ALGEASSDDDLFQS 154
LF + G +SV++ AK + V K + + E DLF S
Sbjct: 726 LFSDEEEKEAQLGVKSVDKKVESAKESLKFGRTDVAESEKEGLLTRSAQETVKHSDLFSS 785
Query: 155 AKP-----KPAKKTNPFPLLEDEDDLFTDQKV---KKNETKSSSQQDVILTTQDIFEDDI 206
+ P KP KT L ++E+D DQ + + E D + +F+D
Sbjct: 786 SSPWDKGTKPRTKT-VLSLFDEEEDKMEDQNIIQAPQKEVGKGRDPDAHPKSTGVFQD-- 842
Query: 207 FATEAIKPSQKTREKEKTLESNLFDDNIDIFADLTVKPKEKSKKKVEAKSIFDDDM-DDI 265
E + S K ++ D ++D+FA K+ + S+F DD DD+
Sbjct: 843 ---EELLFSHKLQKDN--------DPDVDLFAGT----KKTKLLEPSVGSLFGDDEDDDL 887
Query: 266 FSTGIQAKTTKPKSR 280
FS+ + K R
Sbjct: 888 FSSAKSQPLVQEKKR 902
Score = 31.2 bits (69), Expect = 1.2
Identities = 50/216 (23%), Positives = 81/216 (37%), Gaps = 47/216 (21%)
Query: 133 KAKSPMFPALGEASSDDDLFQSAKPKPAKKTNPFPLLEDEDD----LF------TDQKVK 182
+AK+ +L E +DDLF AK K L ED+ D LF K
Sbjct: 655 EAKAVKKTSLFEEDEEDDLFAIAKDSQKKTQRVSLLFEDDVDSGGSLFGSPPTSVPPATK 714
Query: 183 KNETKSSS---------QQDVILTTQDIFEDDIFATEAIK-------PSQK----TREKE 222
K ET S + +++ L + + + A E++K S+K TR +
Sbjct: 715 KKETVSEAPPLLFSDEEEKEAQLGVKSVDKKVESAKESLKFGRTDVAESEKEGLLTRSAQ 774
Query: 223 KTLESNLFDDNIDIFADLTVKPKEKSKKKVEAKSIFDDDMDDIFSTGIQAKTTK------ 276
+T++ + D+F+ + K + S+FD++ D + I K
Sbjct: 775 ETVKHS------DLFSSSSPWDKGTKPRTKTVLSLFDEEEDKMEDQNIIQAPQKEVGKGR 828
Query: 277 -----PKSRSAQAAPEPRFEHKVSNIFDDPLNAFGG 307
PKS E F HK+ D ++ F G
Sbjct: 829 DPDAHPKSTGVFQDEELLFSHKLQKDNDPDVDLFAG 864
>gi|154090959 hypothetical protein LOC55747 [Homo sapiens]
Length = 1253
Score = 604 bits (1557), Expect = e-173
Identities = 303/308 (98%), Positives = 305/308 (99%)
Query: 1 MRGKRRPQTRAARRLAAQESSEAEDMSVPRGPIAQWADGAISPNGHRPQLRAASGEDSTE 60
MRGKRRPQTRAARRLAAQESSE EDMSVPRGPIAQWADGAISPNGHRPQLRAASGEDSTE
Sbjct: 946 MRGKRRPQTRAARRLAAQESSETEDMSVPRGPIAQWADGAISPNGHRPQLRAASGEDSTE 1005
Query: 61 EALAAAAAPWEGGPVPGVDTSPFAKSLGHSRGEADLFDSGDIFSTGTGSQSVERTKPKAK 120
EALAAAAAPWEGGPVPGVD SPFAKSLGHSRGEADLFDSGDIFSTGTGSQSVERTKPKAK
Sbjct: 1006 EALAAAAAPWEGGPVPGVDRSPFAKSLGHSRGEADLFDSGDIFSTGTGSQSVERTKPKAK 1065
Query: 121 IAENPANPPVGGKAKSPMFPALGEASSDDDLFQSAKPKPAKKTNPFPLLEDEDDLFTDQK 180
IAENPANPPVGGKAKSPMFPALGEASSDDDLFQSAKPKPAKKTN FPLLEDEDDLFTDQK
Sbjct: 1066 IAENPANPPVGGKAKSPMFPALGEASSDDDLFQSAKPKPAKKTNTFPLLEDEDDLFTDQK 1125
Query: 181 VKKNETKSSSQQDVILTTQDIFEDDIFATEAIKPSQKTREKEKTLESNLFDDNIDIFADL 240
VKKNETKS+SQQDVILTTQDIFEDDIFATEAIKPSQKTREKEKTLESNLFDDNIDIFADL
Sbjct: 1126 VKKNETKSNSQQDVILTTQDIFEDDIFATEAIKPSQKTREKEKTLESNLFDDNIDIFADL 1185
Query: 241 TVKPKEKSKKKVEAKSIFDDDMDDIFSTGIQAKTTKPKSRSAQAAPEPRFEHKVSNIFDD 300
TVKPKEKSKKKVEAKSIFDDDMDDIFS+GIQAKTTKPKSRSAQAAPEPRFEHKVSNIFDD
Sbjct: 1186 TVKPKEKSKKKVEAKSIFDDDMDDIFSSGIQAKTTKPKSRSAQAAPEPRFEHKVSNIFDD 1245
Query: 301 PLNAFGGQ 308
PLNAFGGQ
Sbjct: 1246 PLNAFGGQ 1253
Score = 35.8 bits (81), Expect = 0.049
Identities = 41/184 (22%), Positives = 79/184 (42%), Gaps = 22/184 (11%)
Query: 101 DIFSTGTGSQSVERTKPKAKIA-ENPANPPVGGKAKSPMFPALGEASSDDDLFQSAKPKP 159
D+F + E KP+ ++P PP G + DDD F + KP
Sbjct: 329 DVFGAASVPSMKEPQKPEQPTPRKSPYGPPPTGLFDDD------DGDDDDDFFSAPHSKP 382
Query: 160 AK----KTNPFPLLEDEDDLFTDQKVKKNE-TKSSSQQDVILTTQDIFEDDIFATEAIKP 214
+K ++ ++E DLF ++ V E T S + ++ + + + +++ +KP
Sbjct: 383 SKTGKVQSTADIFGDEEGDLFKEKAVASPEATVSQTDENKARAEKKV---TLSSSKNLKP 439
Query: 215 SQKTREKEKTLESNLFDDNIDIFADLTVKPKEKSK----KKVEAKSIFDD-DMDDIFSTG 269
S +T+ ++ +D+ D+F+ + + + K + S+FDD D +D G
Sbjct: 440 SSETKTQKGLFSDE--EDSEDLFSSQSASKLKGASLLPGKLPTSVSLFDDEDEEDNLFGG 497
Query: 270 IQAK 273
AK
Sbjct: 498 TAAK 501
Score = 33.9 bits (76), Expect = 0.19
Identities = 46/195 (23%), Positives = 74/195 (37%), Gaps = 28/195 (14%)
Query: 96 LFDSGDIFSTGTGSQSVERTKPKAKIAENPANPPVGGKAKSPMFP-ALGEASSDDDLFQS 154
LF + G +SV++ AK + V K + + E DLF S
Sbjct: 638 LFSDEEEKEAQLGVKSVDKKVESAKESLKFGRTDVAESEKEGLLTRSAQETVKHSDLFSS 697
Query: 155 AKP-----KPAKKTNPFPLLEDEDDLFTDQKV---KKNETKSSSQQDVILTTQDIFEDDI 206
+ P KP KT L ++E+D DQ + + E D + +F+D
Sbjct: 698 SSPWDKGTKPRTKT-VLSLFDEEEDKMEDQNIIQAPQKEVGKGRDPDAHPKSTGVFQD-- 754
Query: 207 FATEAIKPSQKTREKEKTLESNLFDDNIDIFADLTVKPKEKSKKKVEAKSIFDDDM-DDI 265
E + S K ++ D ++D+FA K+ + S+F DD DD+
Sbjct: 755 ---EELLFSHKLQKDN--------DPDVDLFAGT----KKTKLLEPSVGSLFGDDEDDDL 799
Query: 266 FSTGIQAKTTKPKSR 280
FS+ + K R
Sbjct: 800 FSSAKSQPLVQEKKR 814
Score = 31.2 bits (69), Expect = 1.2
Identities = 50/216 (23%), Positives = 81/216 (37%), Gaps = 47/216 (21%)
Query: 133 KAKSPMFPALGEASSDDDLFQSAKPKPAKKTNPFPLLEDEDD----LF------TDQKVK 182
+AK+ +L E +DDLF AK K L ED+ D LF K
Sbjct: 567 EAKAVKKTSLFEEDEEDDLFAIAKDSQKKTQRVSLLFEDDVDSRGSLFGSPPTSVPPATK 626
Query: 183 KNETKSSS---------QQDVILTTQDIFEDDIFATEAIK-------PSQK----TREKE 222
K ET S + +++ L + + + A E++K S+K TR +
Sbjct: 627 KKETVSEAPPLLFSDEEEKEAQLGVKSVDKKVESAKESLKFGRTDVAESEKEGLLTRSAQ 686
Query: 223 KTLESNLFDDNIDIFADLTVKPKEKSKKKVEAKSIFDDDMDDIFSTGIQAKTTK------ 276
+T++ + D+F+ + K + S+FD++ D + I K
Sbjct: 687 ETVKHS------DLFSSSSPWDKGTKPRTKTVLSLFDEEEDKMEDQNIIQAPQKEVGKGR 740
Query: 277 -----PKSRSAQAAPEPRFEHKVSNIFDDPLNAFGG 307
PKS E F HK+ D ++ F G
Sbjct: 741 DPDAHPKSTGVFQDEELLFSHKLQKDNDPDVDLFAG 776
>gi|19924099 synapsin I isoform Ia [Homo sapiens]
Length = 705
Score = 39.7 bits (91), Expect = 0.003
Identities = 44/190 (23%), Positives = 75/190 (39%), Gaps = 18/190 (9%)
Query: 7 PQTRAARRLAAQESSEAEDMSVPRGPIAQWADGAISPNGHRPQLRAASGEDSTEEALAAA 66
PQ A++ + + V GP A A A P PQ +A + + + +++
Sbjct: 515 PQQPASQAAPPTQGQGRQSRPVAGGPGAPPA--ARPPASPSPQRQAGPPQATRQTSVSGP 572
Query: 67 AAPWEGGPVPGVDT--SPFAKSLGHSRGEADLFDSGDIFSTGTGSQSVERT-------KP 117
A P G PG P K G + +G + TG + R +P
Sbjct: 573 APPKASGAPPGGQQRQGPPQKPPGPAGPTRQASQAGPVPRTGPPTTQQPRPSGPGPAGRP 632
Query: 118 KAKIAENPAN---PPVGGKAKSPMFPALGEASSDDDLFQSAKPKPAKKTNPFPLLEDEDD 174
K ++A+ P+ PP A P P L ++ S + F +P P + + L +DE
Sbjct: 633 KPQLAQKPSQDVPPPATAAAGGPPHPQLNKSQSLTNAFNLPEPAPPRPS----LSQDEVK 688
Query: 175 LFTDQKVKKN 184
T + ++K+
Sbjct: 689 AETIRSLRKS 698
>gi|11056038 visual system homeobox 1 isoform a [Homo sapiens]
Length = 365
Score = 37.7 bits (86), Expect = 0.013
Identities = 56/225 (24%), Positives = 89/225 (39%), Gaps = 37/225 (16%)
Query: 42 SPNGHRPQLRAASGEDSTEEALAAAAAPWEGG----------PVPGVDTSPFAKSLGHSR 91
SP G RP+ A + E L A A P +G P PG+D S A R
Sbjct: 22 SPRGSRPRGFAITDLLGLEAELPAPAGPGQGSGCEGPAVAPCPGPGLDGSSLA------R 75
Query: 92 GEADLFDSGDIFSTGTGSQSVERTKPKAKIAENPANPPVGGKAKSPMF-----PALGEAS 146
G L G + GT + R P +A+ P PP G + +P+ PALG
Sbjct: 76 GALPL-GLGLLCGFGTQPPAAARA-PCLLLADVPFLPPRGPEPAAPLAPSRPPPALGRQK 133
Query: 147 SDDDLFQSAKPKPAKKTNPFPLLEDEDDLFTDQKVKKNETKSSSQQDVILTTQDIFEDDI 206
D + S + + ED +DL + K + + + + T + E +
Sbjct: 134 RSDSVSTSDEDSQS---------EDRNDLKASPTLGKRKKR---RHRTVFTAHQLEELEK 181
Query: 207 FATEAIKPSQKTREKEKTLESNLFDDNIDI-FADLTVKPKEKSKK 250
+EA P RE +++ L +D I + F + K +++ K+
Sbjct: 182 AFSEAHYPDVYAREM-LAVKTELPEDRIQVWFQNRRAKWRKREKR 225
>gi|33383235 minichromosome maintenance complex component 10 isoform
2 [Homo sapiens]
Length = 874
Score = 37.0 bits (84), Expect = 0.022
Identities = 36/144 (25%), Positives = 58/144 (40%), Gaps = 22/144 (15%)
Query: 109 SQSVERTKPKAKIAENPANPPVGGK-------AKSPMFPALGEA--SSDDDLFQSAKPKP 159
S VE + + PA PP G A + M P LG DD LF P P
Sbjct: 587 SSEVESPAVPSSSRQPPAQPPRTGSEFPRLEGAPATMTPKLGRGVLEGDDVLFYDESPPP 646
Query: 160 ---------AKKTNPFPLLEDEDDLFTDQKVKKNETKSSSQQDVILTTQDIFEDDIFATE 210
AKK L + + T + K QD++ + + ++ +F+++
Sbjct: 647 RPKLSALAEAKKLAAITKLRAKGQVLTKTNPNSIKKKQKDPQDILEVKERVEKNTMFSSQ 706
Query: 211 A---IKPSQKTREKEKT-LESNLF 230
A ++P++K R ++ LES F
Sbjct: 707 AEDELEPARKKRREQLAYLESEEF 730
>gi|33383237 minichromosome maintenance complex component 10 isoform
1 [Homo sapiens]
Length = 875
Score = 37.0 bits (84), Expect = 0.022
Identities = 36/144 (25%), Positives = 58/144 (40%), Gaps = 22/144 (15%)
Query: 109 SQSVERTKPKAKIAENPANPPVGGK-------AKSPMFPALGEA--SSDDDLFQSAKPKP 159
S VE + + PA PP G A + M P LG DD LF P P
Sbjct: 588 SSEVESPAVPSSSRQPPAQPPRTGSEFPRLEGAPATMTPKLGRGVLEGDDVLFYDESPPP 647
Query: 160 ---------AKKTNPFPLLEDEDDLFTDQKVKKNETKSSSQQDVILTTQDIFEDDIFATE 210
AKK L + + T + K QD++ + + ++ +F+++
Sbjct: 648 RPKLSALAEAKKLAAITKLRAKGQVLTKTNPNSIKKKQKDPQDILEVKERVEKNTMFSSQ 707
Query: 211 A---IKPSQKTREKEKT-LESNLF 230
A ++P++K R ++ LES F
Sbjct: 708 AEDELEPARKKRREQLAYLESEEF 731
>gi|65287717 eukaryotic translation initiation factor 2 alpha kinase
4 [Homo sapiens]
Length = 1649
Score = 36.6 bits (83), Expect = 0.029
Identities = 32/122 (26%), Positives = 47/122 (38%), Gaps = 11/122 (9%)
Query: 72 GGPVPGVDTSPFAKSLGHSRGEADLFDSGDIFSTGTGSQSVERTKPKAKIAENPANPPVG 131
G P D+ P AK +RG+ S G SVE P ++ + G
Sbjct: 664 GPGTPPPDSGPLAKDDRAARGQPA--------SDTDGLDSVEAAAPPPILSSSVEWSTSG 715
Query: 132 GKAKSPMFPALGEASSDDDLFQSAKPKPAKKTNPFPLLEDEDDLFTDQKVKKNETKSSSQ 191
++ S FPA G SSDD+ + + P + E D+ D ++E S
Sbjct: 716 ERSASARFPATGPGSSDDEDDDEDEHGGVFSQSFLPASDSESDIIFD---NEDENSKSQN 772
Query: 192 QD 193
QD
Sbjct: 773 QD 774
>gi|31652264 RNA binding motif protein 26 [Homo sapiens]
Length = 980
Score = 36.6 bits (83), Expect = 0.029
Identities = 46/169 (27%), Positives = 69/169 (40%), Gaps = 32/169 (18%)
Query: 109 SQSVERTKPKAKIAENPANPPVGGKAK--------SPMFPALGEASSDD----------- 149
+Q ++ T PK + + P P V K S + PA +++S D
Sbjct: 609 TQQLQTTSPKP-LVQQPILPVVKQSVKERLGPVPSSTIEPAEAQSASSDLPQVLSTSTGL 667
Query: 150 --DLFQSAKPKPAKKTNPFPLLEDEDDLFTDQKVKKNETKSSSQQDVILTTQDIFEDDIF 207
++ A K A+KT LL + ++ KK + QQDV Q+I E I
Sbjct: 668 TKTVYNPAALKAAQKT----LLVSTSAVDNNEAQKKKQEALKLQQDVRKRKQEILEKHI- 722
Query: 208 ATEAIKPSQKTREKEKTLESNLFDDNIDIFADLTVKPKEKSKKKVEAKS 256
E K EK KT++S +D +I L V K +K K E K+
Sbjct: 723 --ETQKMLISKLEKNKTMKS---EDKAEIMKTLEVLTKNITKLKDEVKA 766
>gi|54112403 chromodomain helicase DNA binding protein 7 [Homo
sapiens]
Length = 2997
Score = 36.2 bits (82), Expect = 0.038
Identities = 41/199 (20%), Positives = 78/199 (39%), Gaps = 12/199 (6%)
Query: 108 GSQSVERTKPKAKIAENPANPPVGGKAKSPMFPALGEA-----SSDDDLFQSAKPKPAKK 162
GSQ ++ K ++K ++P P + K P P +A + ++A PKP
Sbjct: 636 GSQEEKKKKKRSKAKKDPKEPKEPKEKKEPKEPKTPKAPKIPKEPKEKKAKTATPKPKSS 695
Query: 163 TNPFPLLEDEDDLFTDQKVKKNETKSSSQQDVILT---TQDIFEDDIFATEAIKPSQKTR 219
D + +KV K +T+ S D+ T + ED+ + + S++ +
Sbjct: 696 KKSSNKKPDSEASALKKKVNKGKTEGSENSDLDKTPPPSPPPEEDEDPGVQKRRSSRQVK 755
Query: 220 EKEKT--LESNLFDDNIDIFADLTVKPKEKSKKKVEAKSIFDDDMDDIFSTGIQAKTTKP 277
K T LE + D+ D AD + + + E + D + + + +++ K
Sbjct: 756 RKRYTEDLEFKISDEEAD-DADAAGRDSPSNTSQSEQQESVDAE-GPVVEKIMSSRSVKK 813
Query: 278 KSRSAQAAPEPRFEHKVSN 296
+ S + F K N
Sbjct: 814 QKESGEEVEIEEFYVKYKN 832
>gi|40806216 visual system homeobox 1 isoform b [Homo sapiens]
Length = 239
Score = 36.2 bits (82), Expect = 0.038
Identities = 53/210 (25%), Positives = 81/210 (38%), Gaps = 36/210 (17%)
Query: 42 SPNGHRPQLRAASGEDSTEEALAAAAAPWEGG----------PVPGVDTSPFAKSLGHSR 91
SP G RP+ A + E L A A P +G P PG+D S A R
Sbjct: 22 SPRGSRPRGFAITDLLGLEAELPAPAGPGQGSGCEGPAVAPCPGPGLDGSSLA------R 75
Query: 92 GEADLFDSGDIFSTGTGSQSVERTKPKAKIAENPANPPVGGKAKSPMF-----PALGEAS 146
G L G + GT + R P +A+ P PP G + +P+ PALG
Sbjct: 76 GALPL-GLGLLCGFGTQPPAAARA-PCLLLADVPFLPPRGPEPAAPLAPSRPPPALGRQK 133
Query: 147 SDDDLFQSAKPKPAKKTNPFPLLEDEDDLFTDQKVKKNETKSSSQQDVILTTQDIFEDDI 206
D + S + + ED +DL + K + + + + T + E +
Sbjct: 134 RSDSVSTSDEDSQS---------EDRNDLKASPTLGKRKKR---RHRTVFTAHQLEELEK 181
Query: 207 FATEAIKPSQKTREKEKTLESNLFDDNIDI 236
+EA P RE +++ L +D I +
Sbjct: 182 AFSEAHYPDVYAREM-LAVKTELPEDRIQV 210
>gi|148596949 nucleolar and coiled-body phosphoprotein 1 [Homo
sapiens]
Length = 699
Score = 35.8 bits (81), Expect = 0.049
Identities = 57/267 (21%), Positives = 103/267 (38%), Gaps = 27/267 (10%)
Query: 16 AAQESSEAEDMSVPRGPIAQWADGAISP--NGHRPQLRAASGEDSTEEALAAAAAPWEGG 73
++ +S E + + P+ + + A +P P +++S EDS+ + P +
Sbjct: 226 SSDDSEEEKAAATPKKTVPKKQVVAKAPVKAATTPTRKSSSSEDSSSDEEEEQKKPMKNK 285
Query: 74 P-----VPGVDTSPFAKSLGHSRGEADL-----FDSGDIFSTGTGSQSVERTKP--KAKI 121
P VP P KSLG + + +S + S + S S E KP KA +
Sbjct: 286 PGPYSSVPPPSAPPPKKSLGTQPPKKAVEKQQPVESSEDSSDESDSSSEEEKKPPTKAVV 345
Query: 122 AENPANPPVGGKAKSPMFPALGEASSDDD--------LFQSAKPKPAKKTNP---FPLLE 170
++ PP KA + SS+DD +++ KPA T P
Sbjct: 346 SKATTKPPPAKKAAESSSDSSDSDSSEDDEAPSKPAGTTKNSSNKPAVTTKSPAVKPAAA 405
Query: 171 DEDDLFTDQKVKKNETKSSSQQDVILTTQDIFEDDIFATEAIKPSQKTREK--EKTLESN 228
+ + QK+ + SSS ++ ++++ + AT K + K K
Sbjct: 406 PKQPVGGGQKLLTRKADSSSSEEESSSSEEEKTKKMVATTKPKATAKAALSLPAKQAPQG 465
Query: 229 LFDDNIDIFADLTVKPKEKSKKKVEAK 255
D + D + + + +EK+ K K
Sbjct: 466 SRDSSSDSDSSSSEEEEEKTSKSAVKK 492
Score = 31.2 bits (69), Expect = 1.2
Identities = 34/135 (25%), Positives = 51/135 (37%), Gaps = 21/135 (15%)
Query: 31 GPIAQWADGAISPNGHRPQLRAASGEDSTEEALAAAAAPWEGGPVPGVDTSPFAKSLGHS 90
GP+A+ A + + ++ EDS+EE P + VP AK +G
Sbjct: 72 GPVAKKA---------KKKASSSDSEDSSEEEEEVQGPPAKKAAVP-------AKRVGLP 115
Query: 91 RGEADLFDSGDIFSTGTGSQSVERTKPKAKIAENPANPPVGGKAKSPMFPALGEASSDDD 150
G+A S S + E + K P V +AK+ P SSD D
Sbjct: 116 PGKAAAKASESSSSEESSDDDDEEDQKK-----QPVQKGVKPQAKAAKAPPKKAKSSDSD 170
Query: 151 LFQSAKPKPAKKTNP 165
S++ +P K P
Sbjct: 171 SDSSSEDEPPKNQKP 185
>gi|47519562 reticulon 4 isoform E [Homo sapiens]
Length = 986
Score = 35.4 bits (80), Expect = 0.064
Identities = 41/157 (26%), Positives = 63/157 (40%), Gaps = 15/157 (9%)
Query: 47 RPQLRAASGEDSTEEA-LAAAAAPWEGGPVPGVDTSPFAKSLGHSRGEADLFDSGDIFST 105
+P R +DS E++ + AA E VD FA SL + E D S D S
Sbjct: 182 KPFERVWEVKDSKEDSDMLAAGGKIESNLESKVDKKCFADSLEQTNHEKDSESSNDDTSF 241
Query: 106 GTGSQSVERTKPKAKIAENPANPPVGGKAKSPMFPALGEASSDDDLFQ-----------S 154
+ + + + + A I P NP + +FP LG+ +S++ + +
Sbjct: 242 PSTPEGI-KDRSGAYITCAPFNPAATESIATNIFPLLGDPTSENKTDEKKIEEKKAQIVT 300
Query: 155 AKPKPAKKTNPFPLLEDEDDLFTDQKVKKNETKSSSQ 191
K K +NPF L D TD N TK + +
Sbjct: 301 EKNTSTKTSNPF--LVAAQDSETDYVTTDNLTKVTEE 335
>gi|24431935 reticulon 4 isoform A [Homo sapiens]
Length = 1192
Score = 35.4 bits (80), Expect = 0.064
Identities = 41/157 (26%), Positives = 63/157 (40%), Gaps = 15/157 (9%)
Query: 47 RPQLRAASGEDSTEEA-LAAAAAPWEGGPVPGVDTSPFAKSLGHSRGEADLFDSGDIFST 105
+P R +DS E++ + AA E VD FA SL + E D S D S
Sbjct: 388 KPFERVWEVKDSKEDSDMLAAGGKIESNLESKVDKKCFADSLEQTNHEKDSESSNDDTSF 447
Query: 106 GTGSQSVERTKPKAKIAENPANPPVGGKAKSPMFPALGEASSDDDLFQ-----------S 154
+ + + + + A I P NP + +FP LG+ +S++ + +
Sbjct: 448 PSTPEGI-KDRSGAYITCAPFNPAATESIATNIFPLLGDPTSENKTDEKKIEEKKAQIVT 506
Query: 155 AKPKPAKKTNPFPLLEDEDDLFTDQKVKKNETKSSSQ 191
K K +NPF L D TD N TK + +
Sbjct: 507 EKNTSTKTSNPF--LVAAQDSETDYVTTDNLTKVTEE 541
>gi|84043963 eukaryotic translation initiation factor 5B [Homo
sapiens]
Length = 1220
Score = 35.4 bits (80), Expect = 0.064
Identities = 38/140 (27%), Positives = 59/140 (42%), Gaps = 15/140 (10%)
Query: 143 GEASSDDDLFQSAKPKPAKKTNPFPLLEDEDDLFTDQKVKKNETKS--SSQQDVILTTQD 200
G A + K K KK F DEDD+ + + E + + ++ V + +
Sbjct: 30 GAAKEQEPQKSKGKKKKEKKKQDF----DEDDILKELEELSLEAQGIKADRETVAVKPTE 85
Query: 201 IFEDDIFATEAIKPSQKTREKEKTLESNLFDDN-IDIFADLTVKPKEKSKKKVEAKSIFD 259
E++ + + K QK +++ FDDN + D K K+ +K KVE S D
Sbjct: 86 NNEEEFTSKDKKKKGQKGKKQS-------FDDNDSEELEDKDSKSKKTAKPKVEMYSGSD 138
Query: 260 DDMDDIFSTGIQAKTTKPKS 279
DD DD +AK KS
Sbjct: 139 DD-DDFNKLPKKAKGKAQKS 157
>gi|126723390 ankyrin repeat domain 24 [Homo sapiens]
Length = 1146
Score = 35.4 bits (80), Expect = 0.064
Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 22/160 (13%)
Query: 1 MRGKRRPQTRAARR---LAAQESSEAEDMSVPRGPIAQWADGAISP----NGHRPQLRAA 53
++ R+ +TR R A ES A + GP +G+++P NG A
Sbjct: 507 LQALRQQETREVPREEGAACGESEVAGATATKNGPTHMELNGSVAPETKVNGAETIDEEA 566
Query: 54 SGEDSTE------EALAAAAAPWEGGPVPGVDTSPFA---KSLGHSRGEADL------FD 98
+G+++ E EA A A E +T P + + + EA++
Sbjct: 567 AGDETMEARTMEAEATGAEATGAEATGAKVTETKPTGAEVREMETTEEEANMETKPTGAQ 626
Query: 99 SGDIFSTGTGSQSVERTKPKAKIAENPANPPVGGKAKSPM 138
+ D +TG + VE TK KA+ AE A G+A+ P+
Sbjct: 627 ATDTETTGVEAMGVEATKTKAEEAEMQAYGVGAGQAEPPV 666
>gi|199559532 Abelson helper integration site 1 isoform b [Homo
sapiens]
Length = 1053
Score = 34.7 bits (78), Expect = 0.11
Identities = 50/199 (25%), Positives = 76/199 (38%), Gaps = 26/199 (13%)
Query: 74 PVPGVDTSPFAKSLGHSRGEADLFDSGDIFSTGTGSQSVERTKP-KAKIAENPANPPVGG 132
P PGVD K+ R E DL + ++ + E K K KI +
Sbjct: 161 PQPGVDHQKSEKA-NEGREETDLEEDEELMQAYQCHVTEEMAKEIKRKIRKKL------- 212
Query: 133 KAKSPMFPALGEASSDDDLFQSAKPKPAKKTNPFPLLEDEDDLFTDQKVKKNETKSSS-- 190
K + FP+ + DD S K K K+ F E + V+ + K SS
Sbjct: 213 KEQLTYFPS--DTLFHDDKLSSEKRKKKKEVPVFSKAETSTLTISGDTVEGEQKKESSVR 270
Query: 191 -------QQDVILTTQDIFEDDIFATEAIKPSQKTREKEKTLESNLFDDNIDIFADLTVK 243
Q D I + + ED + KP +KT++K K + N D + D ++T +
Sbjct: 271 SVSSDSHQDDEISSMEQSTEDSMQDDTKPKP-KKTKKKTKAVADNNEDVDGDGVHEITSR 329
Query: 244 PKEKSKKKVEAKSIFDDDM 262
V K + DDD+
Sbjct: 330 -----DSPVYPKCLLDDDL 343
>gi|199559490 Abelson helper integration site 1 isoform a [Homo
sapiens]
Length = 1196
Score = 34.7 bits (78), Expect = 0.11
Identities = 50/199 (25%), Positives = 76/199 (38%), Gaps = 26/199 (13%)
Query: 74 PVPGVDTSPFAKSLGHSRGEADLFDSGDIFSTGTGSQSVERTKP-KAKIAENPANPPVGG 132
P PGVD K+ R E DL + ++ + E K K KI +
Sbjct: 161 PQPGVDHQKSEKA-NEGREETDLEEDEELMQAYQCHVTEEMAKEIKRKIRKKL------- 212
Query: 133 KAKSPMFPALGEASSDDDLFQSAKPKPAKKTNPFPLLEDEDDLFTDQKVKKNETKSSS-- 190
K + FP+ + DD S K K K+ F E + V+ + K SS
Sbjct: 213 KEQLTYFPS--DTLFHDDKLSSEKRKKKKEVPVFSKAETSTLTISGDTVEGEQKKESSVR 270
Query: 191 -------QQDVILTTQDIFEDDIFATEAIKPSQKTREKEKTLESNLFDDNIDIFADLTVK 243
Q D I + + ED + KP +KT++K K + N D + D ++T +
Sbjct: 271 SVSSDSHQDDEISSMEQSTEDSMQDDTKPKP-KKTKKKTKAVADNNEDVDGDGVHEITSR 329
Query: 244 PKEKSKKKVEAKSIFDDDM 262
V K + DDD+
Sbjct: 330 -----DSPVYPKCLLDDDL 343
>gi|199559438 Abelson helper integration site 1 isoform a [Homo
sapiens]
Length = 1196
Score = 34.7 bits (78), Expect = 0.11
Identities = 50/199 (25%), Positives = 76/199 (38%), Gaps = 26/199 (13%)
Query: 74 PVPGVDTSPFAKSLGHSRGEADLFDSGDIFSTGTGSQSVERTKP-KAKIAENPANPPVGG 132
P PGVD K+ R E DL + ++ + E K K KI +
Sbjct: 161 PQPGVDHQKSEKA-NEGREETDLEEDEELMQAYQCHVTEEMAKEIKRKIRKKL------- 212
Query: 133 KAKSPMFPALGEASSDDDLFQSAKPKPAKKTNPFPLLEDEDDLFTDQKVKKNETKSSS-- 190
K + FP+ + DD S K K K+ F E + V+ + K SS
Sbjct: 213 KEQLTYFPS--DTLFHDDKLSSEKRKKKKEVPVFSKAETSTLTISGDTVEGEQKKESSVR 270
Query: 191 -------QQDVILTTQDIFEDDIFATEAIKPSQKTREKEKTLESNLFDDNIDIFADLTVK 243
Q D I + + ED + KP +KT++K K + N D + D ++T +
Sbjct: 271 SVSSDSHQDDEISSMEQSTEDSMQDDTKPKP-KKTKKKTKAVADNNEDVDGDGVHEITSR 329
Query: 244 PKEKSKKKVEAKSIFDDDM 262
V K + DDD+
Sbjct: 330 -----DSPVYPKCLLDDDL 343
>gi|31542701 Abelson helper integration site 1 isoform a [Homo
sapiens]
Length = 1196
Score = 34.7 bits (78), Expect = 0.11
Identities = 50/199 (25%), Positives = 76/199 (38%), Gaps = 26/199 (13%)
Query: 74 PVPGVDTSPFAKSLGHSRGEADLFDSGDIFSTGTGSQSVERTKP-KAKIAENPANPPVGG 132
P PGVD K+ R E DL + ++ + E K K KI +
Sbjct: 161 PQPGVDHQKSEKA-NEGREETDLEEDEELMQAYQCHVTEEMAKEIKRKIRKKL------- 212
Query: 133 KAKSPMFPALGEASSDDDLFQSAKPKPAKKTNPFPLLEDEDDLFTDQKVKKNETKSSS-- 190
K + FP+ + DD S K K K+ F E + V+ + K SS
Sbjct: 213 KEQLTYFPS--DTLFHDDKLSSEKRKKKKEVPVFSKAETSTLTISGDTVEGEQKKESSVR 270
Query: 191 -------QQDVILTTQDIFEDDIFATEAIKPSQKTREKEKTLESNLFDDNIDIFADLTVK 243
Q D I + + ED + KP +KT++K K + N D + D ++T +
Sbjct: 271 SVSSDSHQDDEISSMEQSTEDSMQDDTKPKP-KKTKKKTKAVADNNEDVDGDGVHEITSR 329
Query: 244 PKEKSKKKVEAKSIFDDDM 262
V K + DDD+
Sbjct: 330 -----DSPVYPKCLLDDDL 343
>gi|134244585 putative neuronal cell adhesion molecule [Homo
sapiens]
Length = 814
Score = 33.9 bits (76), Expect = 0.19
Identities = 40/147 (27%), Positives = 58/147 (39%), Gaps = 21/147 (14%)
Query: 26 MSVPRGPIAQWADGAISPNGHRPQLRAASGED-------STEEALAAAAAPWEGGPVPGV 78
+S P+GP +Q G ++ NG R R G D E+ A+A + P P
Sbjct: 677 LSPPQGPRSQRDPGILALNGARRGQRGQLGRDEKRVDMKELEQLFPPASAAGQPDPRPTQ 736
Query: 79 DTSPFAKSLGHSRGEADLFDSGDIFSTGTGSQSVERTKPKAKIAENPANPPVGGKAKSPM 138
D + A L G + T +++ E T P A +A P PP GG P
Sbjct: 737 DPAAPAPCEETQLSVLPLQGCGLMEGKTTEAKTTEATAPCAGLAAAPP-PPDGG----PG 791
Query: 139 FPALGEASSDDDLFQSAKPKPAKKTNP 165
+ G+AS +P A+ T P
Sbjct: 792 LLSEGQAS---------RPAAARVTQP 809
>gi|145309302 cell division cycle 2-like 5 isoform 1 [Homo sapiens]
Length = 1512
Score = 33.1 bits (74), Expect = 0.32
Identities = 32/100 (32%), Positives = 41/100 (41%), Gaps = 9/100 (9%)
Query: 2 RGKRRPQTRAARR---LAAQESSEAEDMSVPRGPIAQWADGAISPNGHRPQLRAASGEDS 58
RGKRR R RR A QE+ + S+P+ P GA S G P +
Sbjct: 94 RGKRRAGGRQKRRRGPRAGQEAEKRRVFSLPQ-PQQDGGGGASSGGGVTPLVEYEDVSSQ 152
Query: 59 TEEAL-----AAAAAPWEGGPVPGVDTSPFAKSLGHSRGE 93
+E+ L +AA A G G SP + S RGE
Sbjct: 153 SEQGLLLGGASAATAATAAGGTGGSGGSPASSSGTQRRGE 192
>gi|145309300 cell division cycle 2-like 5 isoform 2 [Homo sapiens]
Length = 1452
Score = 33.1 bits (74), Expect = 0.32
Identities = 32/100 (32%), Positives = 41/100 (41%), Gaps = 9/100 (9%)
Query: 2 RGKRRPQTRAARR---LAAQESSEAEDMSVPRGPIAQWADGAISPNGHRPQLRAASGEDS 58
RGKRR R RR A QE+ + S+P+ P GA S G P +
Sbjct: 94 RGKRRAGGRQKRRRGPRAGQEAEKRRVFSLPQ-PQQDGGGGASSGGGVTPLVEYEDVSSQ 152
Query: 59 TEEAL-----AAAAAPWEGGPVPGVDTSPFAKSLGHSRGE 93
+E+ L +AA A G G SP + S RGE
Sbjct: 153 SEQGLLLGGASAATAATAAGGTGGSGGSPASSSGTQRRGE 192
>gi|4504733 insulin receptor substrate 4 [Homo sapiens]
Length = 1257
Score = 32.7 bits (73), Expect = 0.42
Identities = 20/52 (38%), Positives = 24/52 (46%), Gaps = 2/52 (3%)
Query: 18 QESSEAEDMSVPRGPIAQWADGAISPNGHRPQLRAASGEDSTEEALAAAAAP 69
Q + A D RG AQ G +P H P A G++ A AAAAAP
Sbjct: 1164 QPVANAADAEAVRG--AQDVAGGSNPGAHNPSANLARGDNQAGGAAAAAAAP 1213
>gi|69354671 ATP-binding cassette, sub-family F, member 1 isoform a
[Homo sapiens]
Length = 845
Score = 32.7 bits (73), Expect = 0.42
Identities = 44/181 (24%), Positives = 75/181 (41%), Gaps = 29/181 (16%)
Query: 101 DIFSTGTGSQSVERTKPKA-----KIAENPANPPVGGKAKSP--MFPALGEASSDDDLFQ 153
D+ G + +ER K + + E PA P GGK +F AL + S+++ +
Sbjct: 87 DVDDDGEEKELMERLKKLSVPTSDEEDEVPAPKPRGGKKTKGGNVFAALIQDQSEEEEEE 146
Query: 154 SAKP----KPAKKTNPFPLLEDEDDLFTDQKVKKNETKSSSQQDVILTTQDIFEDDIFAT 209
P KP K + E++ +K K+ ++K ++ D E+D
Sbjct: 147 EKHPPKPAKPEKNRINKAVSEEQQPALKGKKGKEEKSKGKAKPQNKFAALDNEEEDK-EE 205
Query: 210 EAIK---PSQKTREKEKTLESNLFDDNI--------------DIFADLTVKPKEKSKKKV 252
E IK P ++ +EK K E ++ D +A L+ K K+K KK++
Sbjct: 206 EIIKEKEPPKQGKEKAKKAEQGSEEEGEGEEEEEEGGESKADDPYAHLSKKEKKKLKKQM 265
Query: 253 E 253
E
Sbjct: 266 E 266
>gi|112382257 InaD-like [Homo sapiens]
Length = 1801
Score = 32.7 bits (73), Expect = 0.42
Identities = 33/138 (23%), Positives = 54/138 (39%), Gaps = 15/138 (10%)
Query: 78 VDTSPFAKSLGHSRGEADLFDSGDIFSTGTGSQSVERTK----PKAKIAENPANPP---- 129
++ SP K+ G+ L SG + S++VE K P I ++ ++ P
Sbjct: 1108 LEDSPAGKTNALKTGDKILEVSGVDLQNASHSEAVEAIKNAGNPVVFIVQSLSSTPRVIP 1167
Query: 130 -VGGKAKSPMFPALGEASSDDDLFQSAKPKPAKKTNPFPLLED------EDDLFTDQKVK 182
V KA + + Q P P K P+ L D E+D FTDQK++
Sbjct: 1168 NVHNKANKITGNQNQDTQEKKEKRQGTAPPPMKLPPPYKALTDDSDENEEEDAFTDQKIR 1227
Query: 183 KNETKSSSQQDVILTTQD 200
+ + +I +D
Sbjct: 1228 QRYADLPGELHIIELEKD 1245
>gi|24497554 homeobox A13 [Homo sapiens]
Length = 388
Score = 32.3 bits (72), Expect = 0.54
Identities = 23/67 (34%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Query: 11 AARRLAAQESSEAEDMSVPRGPIAQWADGAISPN-GHRPQLRAASGEDSTEEALAAAAAP 69
AA AA +++ ++ P+A A A S G P AA+ + A AAAAA
Sbjct: 75 AAAAAAAAAANQCRNLMAHPAPLAPGAASAYSSAPGEAPPSAAAAAAAAAAAAAAAAAAS 134
Query: 70 WEGGPVP 76
GGP P
Sbjct: 135 SSGGPGP 141
>gi|7657269 PDS5, regulator of cohesion maintenance, homolog B [Homo
sapiens]
Length = 1447
Score = 32.3 bits (72), Expect = 0.54
Identities = 36/124 (29%), Positives = 57/124 (45%), Gaps = 14/124 (11%)
Query: 107 TGSQSVERTKPKAK-----IAENPA---NPPVGGKAKSPMFPALGEASSDDDLFQSAKPK 158
T S+S E+ P+ K I EN +PP GK P P G ++ +++K
Sbjct: 1255 TASESDEQQWPEEKRLKEDILENEDEQNSPPKKGKRGRPPKPLGGGTPKEEPTMKTSKKG 1314
Query: 159 PAKKTNPFPLLEDEDDLFTDQKVKKNETKSSSQQD-VILTTQDIFEDDIFATEAIKPSQK 217
KK+ P P E+E++ +++ E KS S+Q V Q E + AI+ +Q
Sbjct: 1315 SKKKSGP-PAPEEEEE--EERQSGNTEQKSKSKQHRVSRRAQQRAESP--ESSAIESTQS 1369
Query: 218 TREK 221
T +K
Sbjct: 1370 TPQK 1373
>gi|156671219 epsin 2 isoform c [Homo sapiens]
Length = 356
Score = 32.3 bits (72), Expect = 0.54
Identities = 46/183 (25%), Positives = 68/183 (37%), Gaps = 18/183 (9%)
Query: 69 PWEGGPVPGVDTSPFAKSLGHSRGEADLFDSGDIFSTGTGSQSVERTKPKAKIAENPANP 128
PW GGP TS S G ++ A + G TG QSV + ++ PA+
Sbjct: 80 PW-GGPAAPASTSDPWPSFG-TKPAASIDPWG--VPTGATVQSVPKNSDPWAASQQPASS 135
Query: 129 PVGGKAKSPMFPALG-----EASSDDDLFQSAKPKPAKKTNPFPLLEDEDDLFTDQKVKK 183
GK S + A+ S +LF + + F D+L T +K +
Sbjct: 136 --AGKRASDAWGAVSTTKPVSVSGSFELFSNLNGTIKDDFSEF------DNLRTSKKTAE 187
Query: 184 NETKSSSQQDVILTTQDIFEDDIFATEAIKPSQKTREKEKTLESNLFDDNIDIFADLTVK 243
+ T SQ + T+ D FE + KPS + E L N N+D
Sbjct: 188 SVTSLPSQNNGT-TSPDPFESQPLTVASSKPSSARKTPESFLGPNAALVNLDSLVTRPAP 246
Query: 244 PKE 246
P +
Sbjct: 247 PAQ 249
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.308 0.127 0.356
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 12,518,835
Number of Sequences: 37866
Number of extensions: 624735
Number of successful extensions: 2643
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 142
Number of HSP's that attempted gapping in prelim test: 2512
Number of HSP's gapped (non-prelim): 244
length of query: 308
length of database: 18,247,518
effective HSP length: 102
effective length of query: 206
effective length of database: 14,385,186
effective search space: 2963348316
effective search space used: 2963348316
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 62 (28.5 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.