Search of human proteins with 169183885

Search of human proteins with 169183885

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|169183885 PREDICTED: similar to microtubule-associated
proteins 1A/1B light chain 3 [Homo sapiens]
         (157 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|169183885 PREDICTED: similar to microtubule-associated protei...   313   5e-86
gi|169179756 PREDICTED: similar to microtubule-associated protei...   249   5e-67
gi|169180155 PREDICTED: similar to microtubule-associated protei...   249   5e-67
gi|12383056 microtubule-associated proteins 1A/1B light chain 3 ...   214   3e-56
gi|148277548 microtubule-associated protein 1 light chain 3 beta...   210   3e-55
gi|14210522 microtubule-associated protein 1 light chain 3 alpha...   176   7e-45
gi|31563518 microtubule-associated protein 1 light chain 3 alpha...   162   8e-41
gi|239755918 PREDICTED: similar to microtubule-associated protei...   141   3e-34
gi|239750436 PREDICTED: similar to microtubule-associated protei...   141   3e-34
gi|239744738 PREDICTED: similar to microtubule-associated protei...   141   3e-34
gi|51972260 microtubule-associated protein 1 light chain 3 gamma...   115   1e-26
gi|6005768 GABA(A) receptor-associated protein-like 2 [Homo sapi...    78   3e-15
gi|13899219 GABA(A) receptor-associated protein like 1 [Homo sap...    63   9e-11
gi|6005764 GABA(A) receptor-associated protein [Homo sapiens]          62   2e-10
gi|12383066 axotrophin [Homo sapiens]                                  34   0.058
gi|169790837 runt-related transcription factor 1 isoform AML1a [...    32   0.22 
gi|19923198 runt-related transcription factor 1 isoform AML1c [H...    32   0.22 
gi|49574546 runt-related transcription factor 1 isoform AML1b [H...    32   0.22 
gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 ...    32   0.29 
gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 ...    32   0.29 
gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [...    32   0.29 
gi|4826878 oxidative-stress responsive 1 [Homo sapiens]                30   0.84 
gi|153791466 AMIGO protein [Homo sapiens]                              30   0.84 
gi|194239709 dedicator of cytokinesis 9 isoform d [Homo sapiens]       29   1.4  
gi|194239707 dedicator of cytokinesis 9 isoform c [Homo sapiens]       29   1.4  
gi|194239705 dedicator of cytokinesis 9 isoform b [Homo sapiens]       29   1.4  
gi|24308029 dedicator of cytokinesis 9 isoform a [Homo sapiens]        29   1.4  
gi|90652851 zinc finger transcription factor TRPS1 [Homo sapiens]      29   1.9  
gi|169790777 hypothetical protein LOC54494 [Homo sapiens]              29   1.9  
gi|110611228 utrophin [Homo sapiens]                                   28   2.5  

>gi|169183885 PREDICTED: similar to microtubule-associated proteins
           1A/1B light chain 3 [Homo sapiens]
          Length = 157

 Score =  313 bits (801), Expect = 5e-86
 Identities = 157/157 (100%), Positives = 157/157 (100%)

Query: 1   MTRKNTFYRPRRPQEPRGPSRRRRRRLDPRTRPAEKTFKQRRTFQQRVDVRLIQEQHPAK 60
           MTRKNTFYRPRRPQEPRGPSRRRRRRLDPRTRPAEKTFKQRRTFQQRVDVRLIQEQHPAK
Sbjct: 1   MTRKNTFYRPRRPQEPRGPSRRRRRRLDPRTRPAEKTFKQRRTFQQRVDVRLIQEQHPAK 60

Query: 61  SPVITERYQGEKQLPVLDKTKFLVPDVRDVNMSELIKIIRRRLQLNANQAFLLVVNGHSM 120
           SPVITERYQGEKQLPVLDKTKFLVPDVRDVNMSELIKIIRRRLQLNANQAFLLVVNGHSM
Sbjct: 61  SPVITERYQGEKQLPVLDKTKFLVPDVRDVNMSELIKIIRRRLQLNANQAFLLVVNGHSM 120

Query: 121 VSVSTPVSEVYESEKDEDGFLYMVYASQETYGMKLSV 157
           VSVSTPVSEVYESEKDEDGFLYMVYASQETYGMKLSV
Sbjct: 121 VSVSTPVSEVYESEKDEDGFLYMVYASQETYGMKLSV 157


>gi|169179756 PREDICTED: similar to microtubule-associated proteins
           1A/1B light chain 3 [Homo sapiens]
          Length = 377

 Score =  249 bits (637), Expect = 5e-67
 Identities = 127/128 (99%), Positives = 127/128 (99%)

Query: 30  RTRPAEKTFKQRRTFQQRVDVRLIQEQHPAKSPVITERYQGEKQLPVLDKTKFLVPDVRD 89
           R RPAEKTFKQRRTFQQRVDVRLIQEQHPAKSPVITERYQGEKQLPVLDKTKFLVPDVRD
Sbjct: 250 RARPAEKTFKQRRTFQQRVDVRLIQEQHPAKSPVITERYQGEKQLPVLDKTKFLVPDVRD 309

Query: 90  VNMSELIKIIRRRLQLNANQAFLLVVNGHSMVSVSTPVSEVYESEKDEDGFLYMVYASQE 149
           VNMSELIKIIRRRLQLNANQAFLLVVNGHSMVSVSTPVSEVYESEKDEDGFLYMVYASQE
Sbjct: 310 VNMSELIKIIRRRLQLNANQAFLLVVNGHSMVSVSTPVSEVYESEKDEDGFLYMVYASQE 369

Query: 150 TYGMKLSV 157
           TYGMKLSV
Sbjct: 370 TYGMKLSV 377


>gi|169180155 PREDICTED: similar to microtubule-associated proteins
           1A/1B light chain 3 [Homo sapiens]
          Length = 377

 Score =  249 bits (637), Expect = 5e-67
 Identities = 127/128 (99%), Positives = 127/128 (99%)

Query: 30  RTRPAEKTFKQRRTFQQRVDVRLIQEQHPAKSPVITERYQGEKQLPVLDKTKFLVPDVRD 89
           R RPAEKTFKQRRTFQQRVDVRLIQEQHPAKSPVITERYQGEKQLPVLDKTKFLVPDVRD
Sbjct: 250 RARPAEKTFKQRRTFQQRVDVRLIQEQHPAKSPVITERYQGEKQLPVLDKTKFLVPDVRD 309

Query: 90  VNMSELIKIIRRRLQLNANQAFLLVVNGHSMVSVSTPVSEVYESEKDEDGFLYMVYASQE 149
           VNMSELIKIIRRRLQLNANQAFLLVVNGHSMVSVSTPVSEVYESEKDEDGFLYMVYASQE
Sbjct: 310 VNMSELIKIIRRRLQLNANQAFLLVVNGHSMVSVSTPVSEVYESEKDEDGFLYMVYASQE 369

Query: 150 TYGMKLSV 157
           TYGMKLSV
Sbjct: 370 TYGMKLSV 377


>gi|12383056 microtubule-associated proteins 1A/1B light chain 3
           [Homo sapiens]
          Length = 125

 Score =  214 bits (544), Expect = 3e-56
 Identities = 111/126 (88%), Positives = 118/126 (93%), Gaps = 3/126 (2%)

Query: 33  PAEKTFKQRRTFQQRV-DVRLIQEQHPAKSPVITERYQGEKQLPVLDKTKFLVPDVRDVN 91
           P+EKTFKQRRTF+QRV DVRLI+EQHP K PVI ERY+GEKQLPVLDKTKFLVPD   VN
Sbjct: 2   PSEKTFKQRRTFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPD--HVN 59

Query: 92  MSELIKIIRRRLQLNANQAFLLVVNGHSMVSVSTPVSEVYESEKDEDGFLYMVYASQETY 151
           MSELIKIIRRRLQLNANQAF L+VNGHSMVSVSTP+SEVYESEKDEDGFLYMVYASQET+
Sbjct: 60  MSELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESEKDEDGFLYMVYASQETF 119

Query: 152 GMKLSV 157
           GMKLSV
Sbjct: 120 GMKLSV 125


>gi|148277548 microtubule-associated protein 1 light chain 3 beta 2
           [Homo sapiens]
          Length = 125

 Score =  210 bits (535), Expect = 3e-55
 Identities = 110/126 (87%), Positives = 117/126 (92%), Gaps = 3/126 (2%)

Query: 33  PAEKTFKQRRTFQQRV-DVRLIQEQHPAKSPVITERYQGEKQLPVLDKTKFLVPDVRDVN 91
           P+EKTFKQRRTF+QRV DVRLI+EQHP K PVI ERY+GEKQLPVLDKTKFLVPD   VN
Sbjct: 2   PSEKTFKQRRTFEQRVEDVRLIREQHPTKIPVIIERYKGEKQLPVLDKTKFLVPD--HVN 59

Query: 92  MSELIKIIRRRLQLNANQAFLLVVNGHSMVSVSTPVSEVYESEKDEDGFLYMVYASQETY 151
           MSELIKIIRRRLQLNANQAF L+VNGHSMVSVSTP+SEVYESEKDEDGFLYMV ASQET+
Sbjct: 60  MSELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESEKDEDGFLYMVCASQETF 119

Query: 152 GMKLSV 157
           GMKLSV
Sbjct: 120 GMKLSV 125


>gi|14210522 microtubule-associated protein 1 light chain 3 alpha
           isoform a [Homo sapiens]
          Length = 121

 Score =  176 bits (446), Expect = 7e-45
 Identities = 88/121 (72%), Positives = 105/121 (86%), Gaps = 3/121 (2%)

Query: 33  PAEKTFKQRRTFQQRV-DVRLIQEQHPAKSPVITERYQGEKQLPVLDKTKFLVPDVRDVN 91
           P+++ FKQRR+F  R  +V+ I++QHP+K PVI ERY+GEKQLPVLDKTKFLVPD   VN
Sbjct: 2   PSDRPFKQRRSFADRCKEVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPD--HVN 59

Query: 92  MSELIKIIRRRLQLNANQAFLLVVNGHSMVSVSTPVSEVYESEKDEDGFLYMVYASQETY 151
           MSEL+KIIRRRLQLN  QAF L+VN HSMVSVSTP++++YE EKDEDGFLYMVYASQET+
Sbjct: 60  MSELVKIIRRRLQLNPTQAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETF 119

Query: 152 G 152
           G
Sbjct: 120 G 120


>gi|31563518 microtubule-associated protein 1 light chain 3 alpha
           isoform b [Homo sapiens]
          Length = 125

 Score =  162 bits (411), Expect = 8e-41
 Identities = 80/104 (76%), Positives = 93/104 (89%), Gaps = 2/104 (1%)

Query: 49  DVRLIQEQHPAKSPVITERYQGEKQLPVLDKTKFLVPDVRDVNMSELIKIIRRRLQLNAN 108
           +V+ I++QHP+K PVI ERY+GEKQLPVLDKTKFLVPD   VNMSEL+KIIRRRLQLN  
Sbjct: 23  EVQQIRDQHPSKIPVIIERYKGEKQLPVLDKTKFLVPD--HVNMSELVKIIRRRLQLNPT 80

Query: 109 QAFLLVVNGHSMVSVSTPVSEVYESEKDEDGFLYMVYASQETYG 152
           QAF L+VN HSMVSVSTP++++YE EKDEDGFLYMVYASQET+G
Sbjct: 81  QAFFLLVNQHSMVSVSTPIADIYEQEKDEDGFLYMVYASQETFG 124


>gi|239755918 PREDICTED: similar to microtubule-associated protein 1
           light chain 3 beta [Homo sapiens]
          Length = 105

 Score =  141 bits (355), Expect = 3e-34
 Identities = 81/124 (65%), Positives = 88/124 (70%), Gaps = 23/124 (18%)

Query: 34  AEKTFKQRRTFQQRVDVRLIQEQHPAKSPVITERYQGEKQLPVLDKTKFLVPDVRDVNMS 93
           +EKTFKQ  TF+                     RYQGEK+LPVLDKTKFLVPD   VNMS
Sbjct: 3   SEKTFKQCCTFK---------------------RYQGEKELPVLDKTKFLVPD--HVNMS 39

Query: 94  ELIKIIRRRLQLNANQAFLLVVNGHSMVSVSTPVSEVYESEKDEDGFLYMVYASQETYGM 153
           EL KII+R L+LNANQAF L+VNG S VSVSTP SEVYE EKDEDGFLY VYASQE +G 
Sbjct: 40  ELTKIIKRCLRLNANQAFFLLVNGPSTVSVSTPTSEVYEGEKDEDGFLYTVYASQEMFGR 99

Query: 154 KLSV 157
           KLSV
Sbjct: 100 KLSV 103


>gi|239750436 PREDICTED: similar to microtubule-associated protein 1
           light chain 3 beta [Homo sapiens]
          Length = 105

 Score =  141 bits (355), Expect = 3e-34
 Identities = 81/124 (65%), Positives = 88/124 (70%), Gaps = 23/124 (18%)

Query: 34  AEKTFKQRRTFQQRVDVRLIQEQHPAKSPVITERYQGEKQLPVLDKTKFLVPDVRDVNMS 93
           +EKTFKQ  TF+                     RYQGEK+LPVLDKTKFLVPD   VNMS
Sbjct: 3   SEKTFKQCCTFK---------------------RYQGEKELPVLDKTKFLVPD--HVNMS 39

Query: 94  ELIKIIRRRLQLNANQAFLLVVNGHSMVSVSTPVSEVYESEKDEDGFLYMVYASQETYGM 153
           EL KII+R L+LNANQAF L+VNG S VSVSTP SEVYE EKDEDGFLY VYASQE +G 
Sbjct: 40  ELTKIIKRCLRLNANQAFFLLVNGPSTVSVSTPTSEVYEGEKDEDGFLYTVYASQEMFGR 99

Query: 154 KLSV 157
           KLSV
Sbjct: 100 KLSV 103


>gi|239744738 PREDICTED: similar to microtubule-associated proteins
           1A/1B light chain 3 [Homo sapiens]
          Length = 105

 Score =  141 bits (355), Expect = 3e-34
 Identities = 81/124 (65%), Positives = 88/124 (70%), Gaps = 23/124 (18%)

Query: 34  AEKTFKQRRTFQQRVDVRLIQEQHPAKSPVITERYQGEKQLPVLDKTKFLVPDVRDVNMS 93
           +EKTFKQ  TF+                     RYQGEK+LPVLDKTKFLVPD   VNMS
Sbjct: 3   SEKTFKQCCTFK---------------------RYQGEKELPVLDKTKFLVPD--HVNMS 39

Query: 94  ELIKIIRRRLQLNANQAFLLVVNGHSMVSVSTPVSEVYESEKDEDGFLYMVYASQETYGM 153
           EL KII+R L+LNANQAF L+VNG S VSVSTP SEVYE EKDEDGFLY VYASQE +G 
Sbjct: 40  ELTKIIKRCLRLNANQAFFLLVNGPSTVSVSTPTSEVYEGEKDEDGFLYTVYASQEMFGR 99

Query: 154 KLSV 157
           KLSV
Sbjct: 100 KLSV 103


>gi|51972260 microtubule-associated protein 1 light chain 3 gamma
           [Homo sapiens]
          Length = 147

 Score =  115 bits (289), Expect = 1e-26
 Identities = 61/125 (48%), Positives = 86/125 (68%), Gaps = 3/125 (2%)

Query: 29  PRTRPAEKTFKQRRTFQQRVD-VRLIQEQHPAKSPVITERYQGEKQLPVLDKTKFLVPDV 87
           P+  P+ + FKQR++   R + V  I+ + P K PV+ ERY  E  LP LDKTKFLVP  
Sbjct: 4   PQKIPSVRPFKQRKSLAIRQEEVAGIRAKFPNKIPVVVERYPRETFLPPLDKTKFLVP-- 61

Query: 88  RDVNMSELIKIIRRRLQLNANQAFLLVVNGHSMVSVSTPVSEVYESEKDEDGFLYMVYAS 147
           +++ M++ + IIR R+ L A +AF L+VN  S+VS+S  ++E+Y   KDEDGF+YM YAS
Sbjct: 62  QELTMTQFLSIIRSRMVLRATEAFYLLVNNKSLVSMSATMAEIYRDYKDEDGFVYMTYAS 121

Query: 148 QETYG 152
           QET+G
Sbjct: 122 QETFG 126


>gi|6005768 GABA(A) receptor-associated protein-like 2 [Homo
           sapiens]
          Length = 117

 Score = 78.2 bits (191), Expect = 3e-15
 Identities = 43/116 (37%), Positives = 74/116 (63%), Gaps = 5/116 (4%)

Query: 38  FKQRRTFQQR-VDVRLIQEQHPAKSPVITERYQGEKQLPVLDKTKFLVPDVRDVNMSELI 96
           FK+  + + R V+   I+ ++P + PVI E+  G  Q+  +DK K+LVP   D+ +++ +
Sbjct: 5   FKEDHSLEHRCVESAKIRAKYPDRVPVIVEKVSGS-QIVDIDKRKYLVPS--DITVAQFM 61

Query: 97  KIIRRRLQLNANQAFLLVVNGHSMVSVSTPVSEVYESEKDEDGFLYMVYASQETYG 152
            IIR+R+QL + +A  L V+  ++   S  + ++YE EKDEDGFLY+ Y+ + T+G
Sbjct: 62  WIIRKRIQLPSEKAIFLFVD-KTVPQSSLTMGQLYEKEKDEDGFLYVAYSGENTFG 116


>gi|13899219 GABA(A) receptor-associated protein like 1 [Homo
           sapiens]
          Length = 117

 Score = 63.2 bits (152), Expect = 9e-11
 Identities = 36/116 (31%), Positives = 66/116 (56%), Gaps = 5/116 (4%)

Query: 38  FKQRRTFQQRV-DVRLIQEQHPAKSPVITERYQGEKQLPVLDKTKFLVPDVRDVNMSELI 96
           +K+   F+ R  +   I++++P + PVI E+   + ++P LDK K+LVP   D+ + +  
Sbjct: 5   YKEDHPFEYRKKEGEKIRKKYPDRVPVIVEKAP-KARVPDLDKRKYLVPS--DLTVGQFY 61

Query: 97  KIIRRRLQLNANQAFLLVVNGHSMVSVSTPVSEVYESEKDEDGFLYMVYASQETYG 152
            +IR+R+ L    A    VN +++   S  + ++YE   +ED FLY+ Y+ +  YG
Sbjct: 62  FLIRKRIHLRPEDALFFFVN-NTIPPTSATMGQLYEDNHEEDYFLYVAYSDESVYG 116


>gi|6005764 GABA(A) receptor-associated protein [Homo sapiens]
          Length = 117

 Score = 62.0 bits (149), Expect = 2e-10
 Identities = 35/117 (29%), Positives = 67/117 (57%), Gaps = 5/117 (4%)

Query: 38  FKQRRTFQQR-VDVRLIQEQHPAKSPVITERYQGEKQLPVLDKTKFLVPDVRDVNMSELI 96
           +K+   F++R  +   I++++P + PVI E+   + ++  LDK K+LVP   D+ + +  
Sbjct: 5   YKEEHPFEKRRSEGEKIRKKYPDRVPVIVEKAP-KARIGDLDKKKYLVPS--DLTVGQFY 61

Query: 97  KIIRRRLQLNANQAFLLVVNGHSMVSVSTPVSEVYESEKDEDGFLYMVYASQETYGM 153
            +IR+R+ L A  A    VN + +   S  + ++Y+   +ED FLY+ Y+ +  YG+
Sbjct: 62  FLIRKRIHLRAEDALFFFVN-NVIPPTSATMGQLYQEHHEEDFFLYIAYSDESVYGL 117


>gi|12383066 axotrophin [Homo sapiens]
          Length = 704

 Score = 33.9 bits (76), Expect = 0.058
 Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 4/99 (4%)

Query: 9   RPRRPQEPRGPSRRRRRRLDPRTRPAEKTFKQRRTFQQRVDVRLIQEQHPAKSPVITERY 68
           RP +        R  RR L         TF  RR+ Q  ++ R +  ++   SP I    
Sbjct: 265 RPFQESSDNEGRRTTRRLLSRIASSMSSTFFSRRSSQDSLNTRSLNSENSYVSPRILTAS 324

Query: 69  QGEKQLPVLDKTKFLVPDVRDVNMSELIKIIRRRLQLNA 107
           Q    +P   +    VPD R    S+  + +RRR  L++
Sbjct: 325 QSRSNVPSASE----VPDNRASEASQGFRFLRRRWGLSS 359


>gi|169790837 runt-related transcription factor 1 isoform AML1a
           [Homo sapiens]
          Length = 250

 Score = 32.0 bits (71), Expect = 0.22
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 3/49 (6%)

Query: 16  PRGPSRRRRRRLDPRTRPAEKTFKQR--RTFQQRVDVRLIQEQHPAKSP 62
           PR P RR R++LD +T+P   +F +R     Q R     +   HPA +P
Sbjct: 173 PREP-RRHRQKLDDQTKPGSLSFSERLSELEQLRRTAMRVSPHHPAPTP 220


>gi|19923198 runt-related transcription factor 1 isoform AML1c [Homo
           sapiens]
          Length = 480

 Score = 32.0 bits (71), Expect = 0.22
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 3/49 (6%)

Query: 16  PRGPSRRRRRRLDPRTRPAEKTFKQR--RTFQQRVDVRLIQEQHPAKSP 62
           PR P RR R++LD +T+P   +F +R     Q R     +   HPA +P
Sbjct: 200 PREP-RRHRQKLDDQTKPGSLSFSERLSELEQLRRTAMRVSPHHPAPTP 247


>gi|49574546 runt-related transcription factor 1 isoform AML1b [Homo
           sapiens]
          Length = 453

 Score = 32.0 bits (71), Expect = 0.22
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 3/49 (6%)

Query: 16  PRGPSRRRRRRLDPRTRPAEKTFKQR--RTFQQRVDVRLIQEQHPAKSP 62
           PR P RR R++LD +T+P   +F +R     Q R     +   HPA +P
Sbjct: 173 PREP-RRHRQKLDDQTKPGSLSFSERLSELEQLRRTAMRVSPHHPAPTP 220


>gi|224451135 splicing factor, arginine/serine-rich 15 isoform 3 [Homo
            sapiens]
          Length = 1125

 Score = 31.6 bits (70), Expect = 0.29
 Identities = 20/64 (31%), Positives = 28/64 (43%)

Query: 9    RPRRPQEPRGPSRRRRRRLDPRTRPAEKTFKQRRTFQQRVDVRLIQEQHPAKSPVITERY 68
            R RR    R P R R R L+ R R +     + R  + R   R  +E    + P +T+R 
Sbjct: 1006 RDRREWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEEARGKEKPEVTDRA 1065

Query: 69   QGEK 72
             G K
Sbjct: 1066 GGNK 1069


>gi|224451133 splicing factor, arginine/serine-rich 15 isoform 2 [Homo
            sapiens]
          Length = 1132

 Score = 31.6 bits (70), Expect = 0.29
 Identities = 20/64 (31%), Positives = 28/64 (43%)

Query: 9    RPRRPQEPRGPSRRRRRRLDPRTRPAEKTFKQRRTFQQRVDVRLIQEQHPAKSPVITERY 68
            R RR    R P R R R L+ R R +     + R  + R   R  +E    + P +T+R 
Sbjct: 1013 RDRREWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEEARGKEKPEVTDRA 1072

Query: 69   QGEK 72
             G K
Sbjct: 1073 GGNK 1076


>gi|40789229 splicing factor, arginine/serine-rich 15 isoform 1 [Homo
            sapiens]
          Length = 1147

 Score = 31.6 bits (70), Expect = 0.29
 Identities = 20/64 (31%), Positives = 28/64 (43%)

Query: 9    RPRRPQEPRGPSRRRRRRLDPRTRPAEKTFKQRRTFQQRVDVRLIQEQHPAKSPVITERY 68
            R RR    R P R R R L+ R R +     + R  + R   R  +E    + P +T+R 
Sbjct: 1028 RDRREWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRREKEEARGKEKPEVTDRA 1087

Query: 69   QGEK 72
             G K
Sbjct: 1088 GGNK 1091


>gi|4826878 oxidative-stress responsive 1 [Homo sapiens]
          Length = 527

 Score = 30.0 bits (66), Expect = 0.84
 Identities = 13/48 (27%), Positives = 26/48 (54%)

Query: 28  DPRTRPAEKTFKQRRTFQQRVDVRLIQEQHPAKSPVITERYQGEKQLP 75
           DP  RP      + + FQ+  +   +QE+   ++P I+ER +  +++P
Sbjct: 275 DPEKRPTAAELLRHKFFQKAKNKEFLQEKTLQRAPTISERAKKVRRVP 322


>gi|153791466 AMIGO protein [Homo sapiens]
          Length = 493

 Score = 30.0 bits (66), Expect = 0.84
 Identities = 19/44 (43%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 114 VVNGHSMVSVSTPVSEVYESEKDEDGFLYMVYASQETYGMKLSV 157
           V NG   VSVS   S +++  + EDG +Y  YA  ET+   LSV
Sbjct: 313 VTNG--TVSVSKDGSLLFQQVQVEDGGVYTCYAMGETFNETLSV 354


>gi|194239709 dedicator of cytokinesis 9 isoform d [Homo sapiens]
          Length = 1253

 Score = 29.3 bits (64), Expect = 1.4
 Identities = 17/47 (36%), Positives = 25/47 (53%)

Query: 73  QLPVLDKTKFLVPDVRDVNMSELIKIIRRRLQLNANQAFLLVVNGHS 119
           +L + DK+ +L+    +V M E I I+ + LQLN   A     NG S
Sbjct: 249 ELKMQDKSSYLLAADSEVEMEEWITILNKILQLNFEAAMQEKRNGDS 295


>gi|194239707 dedicator of cytokinesis 9 isoform c [Homo sapiens]
          Length = 1254

 Score = 29.3 bits (64), Expect = 1.4
 Identities = 17/47 (36%), Positives = 25/47 (53%)

Query: 73  QLPVLDKTKFLVPDVRDVNMSELIKIIRRRLQLNANQAFLLVVNGHS 119
           +L + DK+ +L+    +V M E I I+ + LQLN   A     NG S
Sbjct: 250 ELKMQDKSSYLLAADSEVEMEEWITILNKILQLNFEAAMQEKRNGDS 296


>gi|194239705 dedicator of cytokinesis 9 isoform b [Homo sapiens]
          Length = 2068

 Score = 29.3 bits (64), Expect = 1.4
 Identities = 17/47 (36%), Positives = 25/47 (53%)

Query: 73  QLPVLDKTKFLVPDVRDVNMSELIKIIRRRLQLNANQAFLLVVNGHS 119
           +L + DK+ +L+    +V M E I I+ + LQLN   A     NG S
Sbjct: 249 ELKMQDKSSYLLAADSEVEMEEWITILNKILQLNFEAAMQEKRNGDS 295


>gi|24308029 dedicator of cytokinesis 9 isoform a [Homo sapiens]
          Length = 2069

 Score = 29.3 bits (64), Expect = 1.4
 Identities = 17/47 (36%), Positives = 25/47 (53%)

Query: 73  QLPVLDKTKFLVPDVRDVNMSELIKIIRRRLQLNANQAFLLVVNGHS 119
           +L + DK+ +L+    +V M E I I+ + LQLN   A     NG S
Sbjct: 250 ELKMQDKSSYLLAADSEVEMEEWITILNKILQLNFEAAMQEKRNGDS 296


>gi|90652851 zinc finger transcription factor TRPS1 [Homo sapiens]
          Length = 1294

 Score = 28.9 bits (63), Expect = 1.9
 Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 4/60 (6%)

Query: 21   RRRRRRLDPRTRPAEKTFKQRR-TFQQRVDVRLIQEQHPAKSPVITERYQGEKQLPVLDK 79
            RR R+RL+P    AE+  KQ+R + +++V+   ++ +       +TE +Q E  LP L K
Sbjct: 960  RRTRKRLNPEALQAEQLNKQQRGSNEEQVNGSPLERR---SEDHLTESHQREIPLPSLSK 1016


>gi|169790777 hypothetical protein LOC54494 [Homo sapiens]
          Length = 147

 Score = 28.9 bits (63), Expect = 1.9
 Identities = 15/38 (39%), Positives = 19/38 (50%)

Query: 11  RRPQEPRGPSRRRRRRLDPRTRPAEKTFKQRRTFQQRV 48
           R P+EP G  R R+ R  P   PA +    R   QQR+
Sbjct: 73  RSPREPDGRGRSRQARFSPYPIPAVEPDLLRSVLQQRL 110


>gi|110611228 utrophin [Homo sapiens]
          Length = 3433

 Score = 28.5 bits (62), Expect = 2.5
 Identities = 23/94 (24%), Positives = 43/94 (45%), Gaps = 2/94 (2%)

Query: 30  RTRPAEKTFKQRRTFQQRVDVRLIQEQHPAKSPVITERYQGEKQLPVLD-KTKFLVPDVR 88
           ++R  E    Q++TF + ++ R  +   P  + + T+   G K L +L+  T   +P  R
Sbjct: 23  KSRSDEHNDVQKKTFTKWINARFSKSGKPPINDMFTDLKDGRKLLDLLEGLTGTSLPKER 82

Query: 89  DVNMSELIKIIRRRLQ-LNANQAFLLVVNGHSMV 121
                  +  + R LQ L+ N   L+ + G  +V
Sbjct: 83  GSTRVHALNNVNRVLQVLHQNNVELVNIGGTDIV 116


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.320    0.134    0.377 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,811,985
Number of Sequences: 37866
Number of extensions: 246112
Number of successful extensions: 1334
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 36
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 1247
Number of HSP's gapped (non-prelim): 99
length of query: 157
length of database: 18,247,518
effective HSP length: 94
effective length of query: 63
effective length of database: 14,688,114
effective search space: 925351182
effective search space used: 925351182
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.