Search of human proteins with 111185922

Search of human proteins with 111185922

BLASTP 2.2.11 [Jun-05-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|111185922 F-box protein 36 [Homo sapiens]
         (188 letters)

Database: hs.faa 
           37,866 sequences; 18,247,518 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|111185922 F-box protein 36 [Homo sapiens]                          386   e-108
gi|15812186 F-box only protein 3 isoform 1 [Homo sapiens]              39   0.003
gi|15812188 F-box only protein 3 isoform 2 [Homo sapiens]              39   0.003
gi|11545739 F-box and WD repeat domain containing 4 [Homo sapiens]     38   0.006
gi|8923179 F-box and leucine-rich repeat protein 12 [Homo sapiens]     34   0.065
gi|30089926 F-box only protein 11 isoform 1 [Homo sapiens]             34   0.085
gi|30089924 F-box only protein 11 isoform 2 [Homo sapiens]             34   0.085
gi|30089922 F-box only protein 11 isoform 3 [Homo sapiens]             34   0.085
gi|4502477 beta-transducin repeat containing protein isoform 2 [...    33   0.14 
gi|16117783 beta-transducin repeat containing protein isoform 1 ...    33   0.14 
gi|54112382 F-box and leucine-rich repeat protein 10 isoform a [...    32   0.25 
gi|54112380 F-box and leucine-rich repeat protein 10 isoform b [...    32   0.25 
gi|161333854 F-box and leucine-rich repeat protein 13 isoform 2 ...    32   0.25 
gi|161333852 F-box and leucine-rich repeat protein 13 isoform 1 ...    32   0.25 
gi|48928050 F-box and WD repeat domain containing 11 isoform C [...    32   0.25 
gi|48928048 F-box and WD repeat domain containing 11 isoform A [...    32   0.25 
gi|48928046 F-box and WD repeat domain containing 11 isoform B [...    32   0.25 
gi|16306574 F-box and leucine-rich repeat protein 5 isoform 2 [H...    32   0.32 
gi|16306572 F-box and leucine-rich repeat protein 5 isoform 1 [H...    32   0.32 
gi|229576894 F-box and WD repeat domain containing 12 isoform 2 ...    32   0.42 
gi|229576873 F-box and WD repeat domain containing 12 isoform 1 ...    32   0.42 
gi|6912466 F-box and leucine-rich repeat protein 7 [Homo sapiens]      32   0.42 
gi|11024696 F-box only protein 24 isoform 2 [Homo sapiens]             31   0.55 
gi|16306595 S-phase kinase-associated protein 2 isoform 1 [Homo ...    31   0.72 
gi|14249170 S-phase kinase-associated protein 2 isoform 2 [Homo ...    31   0.72 
gi|27734755 F-box and leucine-rich repeat protein 20 [Homo sapiens]    31   0.72 
gi|15812196 F-box only protein 24 isoform 1 [Homo sapiens]             31   0.72 
gi|48928044 F-box only protein 8 [Homo sapiens]                        30   0.94 
gi|61743926 F-box and WD repeat domain containing 7 isoform 3 [H...    30   1.2  
gi|16117781 F-box and WD repeat domain containing 7 isoform 1 [H...    30   1.2  

>gi|111185922 F-box protein 36 [Homo sapiens]
          Length = 188

 Score =  386 bits (992), Expect = e-108
 Identities = 188/188 (100%), Positives = 188/188 (100%)

Query: 1   MASWLPETLFETVGQGPPPSKDYYQLLVTRSQVIFRWWKISLRSEYRSTKPGEAKETHED 60
           MASWLPETLFETVGQGPPPSKDYYQLLVTRSQVIFRWWKISLRSEYRSTKPGEAKETHED
Sbjct: 1   MASWLPETLFETVGQGPPPSKDYYQLLVTRSQVIFRWWKISLRSEYRSTKPGEAKETHED 60

Query: 61  FLENSHLQGQTALIFGARILDYVINLCKGKFDFLERLSDDLLLTIISYLDLEDIARLCQT 120
           FLENSHLQGQTALIFGARILDYVINLCKGKFDFLERLSDDLLLTIISYLDLEDIARLCQT
Sbjct: 61  FLENSHLQGQTALIFGARILDYVINLCKGKFDFLERLSDDLLLTIISYLDLEDIARLCQT 120

Query: 121 SHRFAKLCMSDKLWEQIVQSTCDTITPDVRALAEDTGWRQLFFTNKLQLQRQLRKRKQKY 180
           SHRFAKLCMSDKLWEQIVQSTCDTITPDVRALAEDTGWRQLFFTNKLQLQRQLRKRKQKY
Sbjct: 121 SHRFAKLCMSDKLWEQIVQSTCDTITPDVRALAEDTGWRQLFFTNKLQLQRQLRKRKQKY 180

Query: 181 GNLREKQP 188
           GNLREKQP
Sbjct: 181 GNLREKQP 188


>gi|15812186 F-box only protein 3 isoform 1 [Homo sapiens]
          Length = 471

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 18/43 (41%), Positives = 24/43 (55%)

Query: 94  LERLSDDLLLTIISYLDLEDIARLCQTSHRFAKLCMSDKLWEQ 136
           LE L  D LL I+S+LD  D+   C  S R ++L   D LW +
Sbjct: 13  LESLPTDPLLLILSFLDYRDLINCCYVSRRLSQLSSHDPLWRR 55


>gi|15812188 F-box only protein 3 isoform 2 [Homo sapiens]
          Length = 415

 Score = 38.9 bits (89), Expect = 0.003
 Identities = 18/43 (41%), Positives = 24/43 (55%)

Query: 94  LERLSDDLLLTIISYLDLEDIARLCQTSHRFAKLCMSDKLWEQ 136
           LE L  D LL I+S+LD  D+   C  S R ++L   D LW +
Sbjct: 13  LESLPTDPLLLILSFLDYRDLINCCYVSRRLSQLSSHDPLWRR 55


>gi|11545739 F-box and WD repeat domain containing 4 [Homo sapiens]
          Length = 412

 Score = 37.7 bits (86), Expect = 0.006
 Identities = 18/51 (35%), Positives = 29/51 (56%)

Query: 94  LERLSDDLLLTIISYLDLEDIARLCQTSHRFAKLCMSDKLWEQIVQSTCDT 144
           L RL ++LLL I SYLD+  + RL Q      +    D LW +I +++ ++
Sbjct: 28  LWRLPEELLLLICSYLDMRALGRLAQVCRWLRRFTSCDLLWRRIARASLNS 78


>gi|8923179 F-box and leucine-rich repeat protein 12 [Homo sapiens]
          Length = 326

 Score = 34.3 bits (77), Expect = 0.065
 Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 1/56 (1%)

Query: 94  LERLSDDLLLTIISYLDLEDIARLCQTSHRFAKLCMSDKLWEQIVQSTCDTITPDV 149
           L  L D +LL I SYL + D  R+ +  HR+ +L     LW   V  T  T+ P V
Sbjct: 4   LVELPDSVLLEIFSYLPVRDRIRISRVCHRWKRLVDDRWLWRH-VDLTLYTMRPKV 58


>gi|30089926 F-box only protein 11 isoform 1 [Homo sapiens]
          Length = 843

 Score = 33.9 bits (76), Expect = 0.085
 Identities = 16/53 (30%), Positives = 28/53 (52%)

Query: 95  ERLSDDLLLTIISYLDLEDIARLCQTSHRFAKLCMSDKLWEQIVQSTCDTITP 147
           E+L D+++L I SYL  +D+ R      RF++L     LW+++     +   P
Sbjct: 73  EKLPDEVVLKIFSYLLEQDLCRAACVCKRFSELANDPILWKRLYMEVFEYTRP 125


>gi|30089924 F-box only protein 11 isoform 2 [Homo sapiens]
          Length = 686

 Score = 33.9 bits (76), Expect = 0.085
 Identities = 16/53 (30%), Positives = 28/53 (52%)

Query: 95  ERLSDDLLLTIISYLDLEDIARLCQTSHRFAKLCMSDKLWEQIVQSTCDTITP 147
           E+L D+++L I SYL  +D+ R      RF++L     LW+++     +   P
Sbjct: 73  EKLPDEVVLKIFSYLLEQDLCRAACVCKRFSELANDPILWKRLYMEVFEYTRP 125


>gi|30089922 F-box only protein 11 isoform 3 [Homo sapiens]
          Length = 585

 Score = 33.9 bits (76), Expect = 0.085
 Identities = 16/53 (30%), Positives = 28/53 (52%)

Query: 95  ERLSDDLLLTIISYLDLEDIARLCQTSHRFAKLCMSDKLWEQIVQSTCDTITP 147
           E+L D+++L I SYL  +D+ R      RF++L     LW+++     +   P
Sbjct: 73  EKLPDEVVLKIFSYLLEQDLCRAACVCKRFSELANDPILWKRLYMEVFEYTRP 125


>gi|4502477 beta-transducin repeat containing protein isoform 2
           [Homo sapiens]
          Length = 569

 Score = 33.1 bits (74), Expect = 0.14
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%)

Query: 99  DDLLLTIISYLDLEDIARLCQTSHRFAKLCMSDKLWEQIVQSTCDTITPDVRALAEDTGW 158
           D +   I+SYLD + +         + ++     LW+++++    T +   R LAE  GW
Sbjct: 154 DHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSL-WRGLAERRGW 212

Query: 159 RQLFFTNK 166
            Q  F NK
Sbjct: 213 GQYLFKNK 220


>gi|16117783 beta-transducin repeat containing protein isoform 1
           [Homo sapiens]
          Length = 605

 Score = 33.1 bits (74), Expect = 0.14
 Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 1/68 (1%)

Query: 99  DDLLLTIISYLDLEDIARLCQTSHRFAKLCMSDKLWEQIVQSTCDTITPDVRALAEDTGW 158
           D +   I+SYLD + +         + ++     LW+++++    T +   R LAE  GW
Sbjct: 190 DHIAENILSYLDAKSLCAAELVCKEWYRVTSDGMLWKKLIERMVRTDSL-WRGLAERRGW 248

Query: 159 RQLFFTNK 166
            Q  F NK
Sbjct: 249 GQYLFKNK 256


>gi|54112382 F-box and leucine-rich repeat protein 10 isoform a [Homo
            sapiens]
          Length = 1336

 Score = 32.3 bits (72), Expect = 0.25
 Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 6/51 (11%)

Query: 100  DLLLTIISYLDLEDIA---RLCQTSHRFAKLCMSDKLWEQIVQSTCDTITP 147
            ++ + + SYL  +D+    R+C+T +R+   C   +LW +I  + C +ITP
Sbjct: 1068 EVWMAVFSYLSHQDLCVCMRVCRTWNRW---CCDKRLWTRIDLNHCKSITP 1115


>gi|54112380 F-box and leucine-rich repeat protein 10 isoform b [Homo
            sapiens]
          Length = 1265

 Score = 32.3 bits (72), Expect = 0.25
 Identities = 16/51 (31%), Positives = 30/51 (58%), Gaps = 6/51 (11%)

Query: 100  DLLLTIISYLDLEDIA---RLCQTSHRFAKLCMSDKLWEQIVQSTCDTITP 147
            ++ + + SYL  +D+    R+C+T +R+   C   +LW +I  + C +ITP
Sbjct: 999  EVWMAVFSYLSHQDLCVCMRVCRTWNRW---CCDKRLWTRIDLNHCKSITP 1046


>gi|161333854 F-box and leucine-rich repeat protein 13 isoform 2
           [Homo sapiens]
          Length = 690

 Score = 32.3 bits (72), Expect = 0.25
 Identities = 17/63 (26%), Positives = 29/63 (46%)

Query: 97  LSDDLLLTIISYLDLEDIARLCQTSHRFAKLCMSDKLWEQIVQSTCDTITPDVRALAEDT 156
           L +  +L I  YL L+D+    Q +H +  +   + LW  I  S+   + PD   ++   
Sbjct: 158 LPERAILQIFFYLSLKDVIICGQVNHAWMLMTQLNSLWNAIDFSSVKNVIPDKYIVSTLQ 217

Query: 157 GWR 159
            WR
Sbjct: 218 RWR 220


>gi|161333852 F-box and leucine-rich repeat protein 13 isoform 1
           [Homo sapiens]
          Length = 735

 Score = 32.3 bits (72), Expect = 0.25
 Identities = 17/63 (26%), Positives = 29/63 (46%)

Query: 97  LSDDLLLTIISYLDLEDIARLCQTSHRFAKLCMSDKLWEQIVQSTCDTITPDVRALAEDT 156
           L +  +L I  YL L+D+    Q +H +  +   + LW  I  S+   + PD   ++   
Sbjct: 158 LPERAILQIFFYLSLKDVIICGQVNHAWMLMTQLNSLWNAIDFSSVKNVIPDKYIVSTLQ 217

Query: 157 GWR 159
            WR
Sbjct: 218 RWR 220


>gi|48928050 F-box and WD repeat domain containing 11 isoform C
           [Homo sapiens]
          Length = 542

 Score = 32.3 bits (72), Expect = 0.25
 Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 1/68 (1%)

Query: 99  DDLLLTIISYLDLEDIARLCQTSHRFAKLCMSDKLWEQIVQSTCDTITPDVRALAEDTGW 158
           D +   I+SYLD   +         + ++     LW+++++    T  P  + L+E  GW
Sbjct: 129 DHIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRT-DPLWKGLSERRGW 187

Query: 159 RQLFFTNK 166
            Q  F N+
Sbjct: 188 DQYLFKNR 195


>gi|48928048 F-box and WD repeat domain containing 11 isoform A
           [Homo sapiens]
          Length = 508

 Score = 32.3 bits (72), Expect = 0.25
 Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 1/68 (1%)

Query: 99  DDLLLTIISYLDLEDIARLCQTSHRFAKLCMSDKLWEQIVQSTCDTITPDVRALAEDTGW 158
           D +   I+SYLD   +         + ++     LW+++++    T  P  + L+E  GW
Sbjct: 95  DHIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRT-DPLWKGLSERRGW 153

Query: 159 RQLFFTNK 166
            Q  F N+
Sbjct: 154 DQYLFKNR 161


>gi|48928046 F-box and WD repeat domain containing 11 isoform B
           [Homo sapiens]
          Length = 529

 Score = 32.3 bits (72), Expect = 0.25
 Identities = 17/68 (25%), Positives = 31/68 (45%), Gaps = 1/68 (1%)

Query: 99  DDLLLTIISYLDLEDIARLCQTSHRFAKLCMSDKLWEQIVQSTCDTITPDVRALAEDTGW 158
           D +   I+SYLD   +         + ++     LW+++++    T  P  + L+E  GW
Sbjct: 116 DHIAENILSYLDARSLCAAELVCKEWQRVISEGMLWKKLIERMVRT-DPLWKGLSERRGW 174

Query: 159 RQLFFTNK 166
            Q  F N+
Sbjct: 175 DQYLFKNR 182


>gi|16306574 F-box and leucine-rich repeat protein 5 isoform 2 [Homo
           sapiens]
          Length = 565

 Score = 32.0 bits (71), Expect = 0.32
 Identities = 12/44 (27%), Positives = 28/44 (63%)

Query: 94  LERLSDDLLLTIISYLDLEDIARLCQTSHRFAKLCMSDKLWEQI 137
           +  L  +++L+I SYL+ +++ R  Q S ++++L  +  LW+ +
Sbjct: 79  ITHLPPEVMLSIFSYLNPQELCRCSQVSMKWSQLTKTGSLWKHL 122


>gi|16306572 F-box and leucine-rich repeat protein 5 isoform 1 [Homo
           sapiens]
          Length = 691

 Score = 32.0 bits (71), Expect = 0.32
 Identities = 12/44 (27%), Positives = 28/44 (63%)

Query: 94  LERLSDDLLLTIISYLDLEDIARLCQTSHRFAKLCMSDKLWEQI 137
           +  L  +++L+I SYL+ +++ R  Q S ++++L  +  LW+ +
Sbjct: 205 ITHLPPEVMLSIFSYLNPQELCRCSQVSMKWSQLTKTGSLWKHL 248


>gi|229576894 F-box and WD repeat domain containing 12 isoform 2
           [Homo sapiens]
          Length = 394

 Score = 31.6 bits (70), Expect = 0.42
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 4/79 (5%)

Query: 96  RLSDDLLLTIISYLDLEDIARLCQTSHRFAKLCMSDKLWEQIVQSTCDTITPDVRALAED 155
           RL D  L  I S+LDL  + ++ Q +  + ++  SD LW  +     D      + L   
Sbjct: 4   RLPDLALKRIFSFLDLFGLLQVSQVNKHWNRIADSDYLWRSLSLQRWDCSNFTNQHLGTH 63

Query: 156 TGWRQLFFTNKLQLQRQLR 174
           T W+Q F     Q +++LR
Sbjct: 64  T-WKQFFLH---QRRKELR 78


>gi|229576873 F-box and WD repeat domain containing 12 isoform 1
           [Homo sapiens]
          Length = 464

 Score = 31.6 bits (70), Expect = 0.42
 Identities = 23/79 (29%), Positives = 37/79 (46%), Gaps = 4/79 (5%)

Query: 96  RLSDDLLLTIISYLDLEDIARLCQTSHRFAKLCMSDKLWEQIVQSTCDTITPDVRALAED 155
           RL D  L  I S+LDL  + ++ Q +  + ++  SD LW  +     D      + L   
Sbjct: 4   RLPDLALKRIFSFLDLFGLLQVSQVNKHWNRIADSDYLWRSLSLQRWDCSNFTNQHLGTH 63

Query: 156 TGWRQLFFTNKLQLQRQLR 174
           T W+Q F     Q +++LR
Sbjct: 64  T-WKQFFLH---QRRKELR 78


>gi|6912466 F-box and leucine-rich repeat protein 7 [Homo sapiens]
          Length = 491

 Score = 31.6 bits (70), Expect = 0.42
 Identities = 19/69 (27%), Positives = 33/69 (47%), Gaps = 7/69 (10%)

Query: 94  LERLSDDLLLTIISYLDLEDIARLCQTSHRFAKLCMSDKLWEQIVQSTCDTITPD----- 148
           ++RL D  ++ I S+L    + R  +   R+  L    +LW + ++ T +TI  D     
Sbjct: 114 IDRLPDHSMVQIFSFLPTNQLCRCARVCRRWYNLAWDPRLW-RTIRLTGETINVDRALKV 172

Query: 149 -VRALAEDT 156
             R L +DT
Sbjct: 173 LTRRLCQDT 181


>gi|11024696 F-box only protein 24 isoform 2 [Homo sapiens]
          Length = 318

 Score = 31.2 bits (69), Expect = 0.55
 Identities = 20/76 (26%), Positives = 38/76 (50%), Gaps = 8/76 (10%)

Query: 88  KGKFDFLERLSDDLLLTIISYLDLEDIARLCQTSHRFAKLCMSDKLWEQIVQSTCDTITP 147
           KG    ++    +L+  IIS+L + D+  L QT   F ++C  + +W +I    C  ++P
Sbjct: 33  KGNPISIQLFPPELVEHIISFLPVRDLVALGQTCRYFHEVCDGEGVWRRI----CRRLSP 88

Query: 148 DVRALAEDTGWRQLFF 163
            +    +D   + L+F
Sbjct: 89  RL----QDQDTKGLYF 100


>gi|16306595 S-phase kinase-associated protein 2 isoform 1 [Homo
           sapiens]
          Length = 424

 Score = 30.8 bits (68), Expect = 0.72
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)

Query: 95  ERLSDDLLLTIISYLDLEDIARLCQTSHRFAKLCMSDKLWEQIVQSTCDTITPDV 149
           + L D+LLL I S L L ++ ++     R+ +L   + LW Q +  T   + PDV
Sbjct: 98  DSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLW-QTLDLTGKNLHPDV 151


>gi|14249170 S-phase kinase-associated protein 2 isoform 2 [Homo
           sapiens]
          Length = 410

 Score = 30.8 bits (68), Expect = 0.72
 Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)

Query: 95  ERLSDDLLLTIISYLDLEDIARLCQTSHRFAKLCMSDKLWEQIVQSTCDTITPDV 149
           + L D+LLL I S L L ++ ++     R+ +L   + LW Q +  T   + PDV
Sbjct: 98  DSLPDELLLGIFSCLCLPELLKVSGVCKRWYRLASDESLW-QTLDLTGKNLHPDV 151


>gi|27734755 F-box and leucine-rich repeat protein 20 [Homo sapiens]
          Length = 436

 Score = 30.8 bits (68), Expect = 0.72
 Identities = 14/43 (32%), Positives = 24/43 (55%)

Query: 95  ERLSDDLLLTIISYLDLEDIARLCQTSHRFAKLCMSDKLWEQI 137
           ++L  +LLL I S+LD+  + R  Q S  +  L +    W++I
Sbjct: 26  KKLPKELLLRIFSFLDVVTLCRCAQVSRAWNVLALDGSNWQRI 68


>gi|15812196 F-box only protein 24 isoform 1 [Homo sapiens]
          Length = 580

 Score = 30.8 bits (68), Expect = 0.72
 Identities = 17/60 (28%), Positives = 31/60 (51%), Gaps = 4/60 (6%)

Query: 88  KGKFDFLERLSDDLLLTIISYLDLEDIARLCQTSHRFAKLCMSDKLWEQIVQSTCDTITP 147
           KG    ++    +L+  IIS+L + D+  L QT   F ++C  + +W +I    C  ++P
Sbjct: 33  KGNPISIQLFPPELVEHIISFLPVRDLVALGQTCRYFHEVCDGEGVWRRI----CRRLSP 88


>gi|48928044 F-box only protein 8 [Homo sapiens]
          Length = 319

 Score = 30.4 bits (67), Expect = 0.94
 Identities = 18/48 (37%), Positives = 26/48 (54%), Gaps = 3/48 (6%)

Query: 94  LERLSDDLLLTIISYLDLEDIARLCQTSHRFAKLCMSDKLWEQIVQST 141
           LE L  +L  TI+SYL+  D   LC  S  +  L   + LW+ + +ST
Sbjct: 71  LEMLPPELSFTILSYLNATD---LCLASCVWQDLANDELLWQGLCKST 115


>gi|61743926 F-box and WD repeat domain containing 7 isoform 3 [Homo
           sapiens]
          Length = 589

 Score = 30.0 bits (66), Expect = 1.2
 Identities = 13/45 (28%), Positives = 25/45 (55%)

Query: 92  DFLERLSDDLLLTIISYLDLEDIARLCQTSHRFAKLCMSDKLWEQ 136
           DF+  L  +L L ++S+L+ +D+ +  QT   +  L   + LW +
Sbjct: 161 DFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWRE 205


>gi|16117781 F-box and WD repeat domain containing 7 isoform 1 [Homo
           sapiens]
          Length = 707

 Score = 30.0 bits (66), Expect = 1.2
 Identities = 13/45 (28%), Positives = 25/45 (55%)

Query: 92  DFLERLSDDLLLTIISYLDLEDIARLCQTSHRFAKLCMSDKLWEQ 136
           DF+  L  +L L ++S+L+ +D+ +  QT   +  L   + LW +
Sbjct: 279 DFISLLPKELALYVLSFLEPKDLLQAAQTCRYWRILAEDNLLWRE 323


  Database: hs.faa
    Posted date:  Aug 4, 2009  4:42 PM
  Number of letters in database: 18,247,518
  Number of sequences in database:  37,866
  
Lambda     K      H
   0.322    0.137    0.419 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,476,283
Number of Sequences: 37866
Number of extensions: 292171
Number of successful extensions: 782
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 740
Number of HSP's gapped (non-prelim): 43
length of query: 188
length of database: 18,247,518
effective HSP length: 96
effective length of query: 92
effective length of database: 14,612,382
effective search space: 1344339144
effective search space used: 1344339144
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.