Guide to the Human Genome
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Name: FBXW12 Sequence: fasta or formatted (394aa) NCBI GI: 229576894
Description:

F-box and WD repeat domain containing 12 isoform 2

Referenced in:

Cullins and SCF Complexes
WD Repeat Proteins

Other entries for this name:
alt prot [464aa] F-box and WD repeat domain containing 12 isoform 1
alt prot [445aa] F-box and WD repeat domain containing 12 isoform 3
Composition:

amino acid map
 Amino acid        Percentage    Count  Longest homopolymer
 A alanine             5.3         21           2
 C cysteine            3.3         13           2
 D aspartate           4.8         19           1
 E glutamate           4.3         17           2
 F phenylalanine       5.3         21           2
 G glycine             4.6         18           2
 H histidine           3.6         14           1
 I isoleucine          5.1         20           2
 K lysine              5.1         20           2
 L leucine            11.2         44           3
 M methionine          1.8          7           1
 N asparagine          3.6         14           2
 P proline             3.6         14           1
 Q glutamine           4.6         18           1
 R arginine            4.6         18           2
 S serine              9.1         36           2
 T threonine           7.6         30           2
 V valine              6.6         26           1
 W tryptophan          2.8         11           1
 Y tyrosine            3.3         13           1
Comparative genomics:

Search single species RefSeq proteins at NCBI
   H. sapiens
   M. musculus
   D. rerio
   C. intestinalis
   S. purpuratus
   D. melanogaster
   C. elegans
   A. thaliana
   S. cerevisiae
   E. coli W3110
   A. pernix K1

Search summary

comparative genomics plot

   Figure data

Additional searches of
RefSeq proteins at NCBI

   All
   Eukaryotes
   Bacteria
   Archaea
   Viruses
   Primates
   Mammals
   Vertebrates

Related human proteins:
Protein          Relative score         Description

Self-match            1.000   F-box and WD repeat domain containing 12 isoform 2 ... 
FBXW12                0.912   F-box and WD repeat domain containing 12 isoform 1 ...
FBXW12                0.843   F-box and WD repeat domain containing 12 isoform 3 ...
FBXL12                0.020   F-box and leucine-rich repeat protein 12 
FBXO16                0.019   F-box only protein 16 
SKP2                  0.018   S-phase kinase-associated protein 2 isoform 1 
SKP2                  0.018   S-phase kinase-associated protein 2 isoform 2 
FBXL2                 0.016   F-box and leucine-rich repeat protein 2 
FBXL20                0.015   F-box and leucine-rich repeat protein 20 
FBXW8                 0.014   F-box and WD repeat domain containing 8 isoform 2 [H...
FBXW8                 0.014   F-box and WD repeat domain containing 8 isoform 1 [H...
FBXL7                 0.013   F-box and leucine-rich repeat protein 7 
FBXO45                0.013   F-box protein 45 
FBXL5                 0.009   F-box and leucine-rich repeat protein 5 isoform 2 [H...
FBXL5                 0.009   F-box and leucine-rich repeat protein 5 isoform 1 [H...
FBXL13                0.009   F-box and leucine-rich repeat protein 13 isoform 2 ...
FBXL13                0.009   F-box and leucine-rich repeat protein 13 isoform 1 ...
FBXO36                0.009   F-box protein 36 
FBXW4                 0.009   F-box and WD repeat domain containing 4 
FBXW7                 0.008   F-box and WD repeat domain containing 7 isoform 3 [H...
FBXW7                 0.008   F-box and WD repeat domain containing 7 isoform 1 [H...
FBXW7                 0.008   F-box and WD repeat domain containing 7 isoform 2 [H...
FBXW5                 0.008   F-box and WD repeat domain containing 5 
PLEKHG4               0.008   pleckstrin homology domain containing, family G (wi...
PLEKHG4               0.008   pleckstrin homology domain containing, family G (wi...
PLEKHG4               0.008   pleckstrin homology domain containing, family G (wi...
PLEKHG4               0.008   pleckstrin homology domain containing, family G (wit...
BCL2                  0.006   B-cell lymphoma protein 2 beta isoform 
BCL2                  0.006   B-cell lymphoma protein 2 alpha isoform 
SERINC3               0.006   tumor differentially expressed protein 1 
Human BLASTP results (used to prepare the table)

Gene descriptions are from NCBI RefSeq. Search results were obtained with NCBI BLAST and RefSeq entries. When identical proteins are present, the self-match may not be listed first in BLASTP output. In such cases, the table above has been reordered to place it first.

See About the Figures for the scoring system used in the figure above right. The same scoring system was used in the table of BLASTP results.


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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.

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