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Search of human proteins with 169171704
BLASTP 2.2.11 [Jun-05-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= gi|169171704 PREDICTED: similar to hCG1770601 [Homo sapiens]
(222 letters)
Database: hs.faa
37,866 sequences; 18,247,518 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gi|169171704 PREDICTED: similar to hCG1770601 [Homo sapiens] 470 e-133
gi|169171845 PREDICTED: similar to hCG1770601 [Homo sapiens] 470 e-133
gi|169171183 PREDICTED: similar to hCG1770601 [Homo sapiens] 470 e-133
gi|239508957 PREDICTED: similar to hCG1770601 [Homo sapiens] 470 e-133
gi|31559821 gap junction protein, gamma 3, 30.2kDa [Homo sapiens] 180 1e-45
gi|122939172 connexin 45 [Homo sapiens] 112 3e-25
gi|69122473 connexin 45 [Homo sapiens] 112 3e-25
gi|45439367 gap junction protein, gamma 2, 47kDa [Homo sapiens] 106 2e-23
gi|55953076 connexin 50 [Homo sapiens] 96 2e-20
gi|22779877 connexin 46 [Homo sapiens] 94 7e-20
gi|10190698 gap junction protein, delta 2, 36kDa [Homo sapiens] 94 9e-20
gi|31542845 gap junction protein, alpha 9, 59kDa [Homo sapiens] 91 8e-19
gi|62865885 connexin 37 [Homo sapiens] 90 1e-18
gi|14211941 gap junction protein, alpha 10 [Homo sapiens] 90 2e-18
gi|32483412 connexin 40 [Homo sapiens] 87 1e-17
gi|6631083 connexin 40 [Homo sapiens] 87 1e-17
gi|148839378 gap junction protein, delta 3, 31.9kDa [Homo sapiens] 87 1e-17
gi|4504001 connexin 43 [Homo sapiens] 86 3e-17
gi|148233402 gap junction protein, beta 1, 32kDa [Homo sapiens] 86 3e-17
gi|4504005 gap junction protein, beta 1, 32kDa [Homo sapiens] 86 3e-17
gi|145699105 connexin40.1 [Homo sapiens] 85 6e-17
gi|42558283 gap junction protein beta 2 [Homo sapiens] 84 7e-17
gi|159032020 gap junction protein, beta 6 [Homo sapiens] 83 2e-16
gi|158966714 gap junction protein, beta 6 [Homo sapiens] 83 2e-16
gi|158966717 gap junction protein, beta 6 [Homo sapiens] 83 2e-16
gi|40254837 gap junction protein, beta 6 [Homo sapiens] 83 2e-16
gi|38348412 gap junction protein, beta 7, 25kDa [Homo sapiens] 78 5e-15
gi|54607056 connexin 31 [Homo sapiens] 76 3e-14
gi|13128960 connexin 31 [Homo sapiens] 76 3e-14
gi|23397464 gap junction protein, beta 4 [Homo sapiens] 75 3e-14
>gi|169171704 PREDICTED: similar to hCG1770601 [Homo sapiens]
Length = 222
Score = 470 bits (1210), Expect = e-133
Identities = 222/222 (100%), Positives = 222/222 (100%)
Query: 1 MDDDKGGERSHRIQVLGRMCGRFLRWWLLAEESWHSTPVGRLLFPVLLGFRLVLLAASGP 60
MDDDKGGERSHRIQVLGRMCGRFLRWWLLAEESWHSTPVGRLLFPVLLGFRLVLLAASGP
Sbjct: 1 MDDDKGGERSHRIQVLGRMCGRFLRWWLLAEESWHSTPVGRLLFPVLLGFRLVLLAASGP 60
Query: 61 GVYGDEQSEFVCHTQQPGCKAACFDAFHPLSPLRFWVFQVILVAVPSVLYMGYTPWESGV 120
GVYGDEQSEFVCHTQQPGCKAACFDAFHPLSPLRFWVFQVILVAVPSVLYMGYTPWESGV
Sbjct: 61 GVYGDEQSEFVCHTQQPGCKAACFDAFHPLSPLRFWVFQVILVAVPSVLYMGYTPWESGV 120
Query: 121 FQYREPPRCGPSEVLERAPRPPAPATLPAFVGRSDGGLRLSVLFVAVTAVCSCQRLASKM 180
FQYREPPRCGPSEVLERAPRPPAPATLPAFVGRSDGGLRLSVLFVAVTAVCSCQRLASKM
Sbjct: 121 FQYREPPRCGPSEVLERAPRPPAPATLPAFVGRSDGGLRLSVLFVAVTAVCSCQRLASKM 180
Query: 181 YYGNLDIYELPCNGKVVTATSRVPAKFYPEWNKLLIVPFPGF 222
YYGNLDIYELPCNGKVVTATSRVPAKFYPEWNKLLIVPFPGF
Sbjct: 181 YYGNLDIYELPCNGKVVTATSRVPAKFYPEWNKLLIVPFPGF 222
>gi|169171845 PREDICTED: similar to hCG1770601 [Homo sapiens]
Length = 222
Score = 470 bits (1210), Expect = e-133
Identities = 222/222 (100%), Positives = 222/222 (100%)
Query: 1 MDDDKGGERSHRIQVLGRMCGRFLRWWLLAEESWHSTPVGRLLFPVLLGFRLVLLAASGP 60
MDDDKGGERSHRIQVLGRMCGRFLRWWLLAEESWHSTPVGRLLFPVLLGFRLVLLAASGP
Sbjct: 1 MDDDKGGERSHRIQVLGRMCGRFLRWWLLAEESWHSTPVGRLLFPVLLGFRLVLLAASGP 60
Query: 61 GVYGDEQSEFVCHTQQPGCKAACFDAFHPLSPLRFWVFQVILVAVPSVLYMGYTPWESGV 120
GVYGDEQSEFVCHTQQPGCKAACFDAFHPLSPLRFWVFQVILVAVPSVLYMGYTPWESGV
Sbjct: 61 GVYGDEQSEFVCHTQQPGCKAACFDAFHPLSPLRFWVFQVILVAVPSVLYMGYTPWESGV 120
Query: 121 FQYREPPRCGPSEVLERAPRPPAPATLPAFVGRSDGGLRLSVLFVAVTAVCSCQRLASKM 180
FQYREPPRCGPSEVLERAPRPPAPATLPAFVGRSDGGLRLSVLFVAVTAVCSCQRLASKM
Sbjct: 121 FQYREPPRCGPSEVLERAPRPPAPATLPAFVGRSDGGLRLSVLFVAVTAVCSCQRLASKM 180
Query: 181 YYGNLDIYELPCNGKVVTATSRVPAKFYPEWNKLLIVPFPGF 222
YYGNLDIYELPCNGKVVTATSRVPAKFYPEWNKLLIVPFPGF
Sbjct: 181 YYGNLDIYELPCNGKVVTATSRVPAKFYPEWNKLLIVPFPGF 222
>gi|169171183 PREDICTED: similar to hCG1770601 [Homo sapiens]
Length = 222
Score = 470 bits (1210), Expect = e-133
Identities = 222/222 (100%), Positives = 222/222 (100%)
Query: 1 MDDDKGGERSHRIQVLGRMCGRFLRWWLLAEESWHSTPVGRLLFPVLLGFRLVLLAASGP 60
MDDDKGGERSHRIQVLGRMCGRFLRWWLLAEESWHSTPVGRLLFPVLLGFRLVLLAASGP
Sbjct: 1 MDDDKGGERSHRIQVLGRMCGRFLRWWLLAEESWHSTPVGRLLFPVLLGFRLVLLAASGP 60
Query: 61 GVYGDEQSEFVCHTQQPGCKAACFDAFHPLSPLRFWVFQVILVAVPSVLYMGYTPWESGV 120
GVYGDEQSEFVCHTQQPGCKAACFDAFHPLSPLRFWVFQVILVAVPSVLYMGYTPWESGV
Sbjct: 61 GVYGDEQSEFVCHTQQPGCKAACFDAFHPLSPLRFWVFQVILVAVPSVLYMGYTPWESGV 120
Query: 121 FQYREPPRCGPSEVLERAPRPPAPATLPAFVGRSDGGLRLSVLFVAVTAVCSCQRLASKM 180
FQYREPPRCGPSEVLERAPRPPAPATLPAFVGRSDGGLRLSVLFVAVTAVCSCQRLASKM
Sbjct: 121 FQYREPPRCGPSEVLERAPRPPAPATLPAFVGRSDGGLRLSVLFVAVTAVCSCQRLASKM 180
Query: 181 YYGNLDIYELPCNGKVVTATSRVPAKFYPEWNKLLIVPFPGF 222
YYGNLDIYELPCNGKVVTATSRVPAKFYPEWNKLLIVPFPGF
Sbjct: 181 YYGNLDIYELPCNGKVVTATSRVPAKFYPEWNKLLIVPFPGF 222
>gi|239508957 PREDICTED: similar to hCG1770601 [Homo sapiens]
Length = 222
Score = 470 bits (1210), Expect = e-133
Identities = 222/222 (100%), Positives = 222/222 (100%)
Query: 1 MDDDKGGERSHRIQVLGRMCGRFLRWWLLAEESWHSTPVGRLLFPVLLGFRLVLLAASGP 60
MDDDKGGERSHRIQVLGRMCGRFLRWWLLAEESWHSTPVGRLLFPVLLGFRLVLLAASGP
Sbjct: 1 MDDDKGGERSHRIQVLGRMCGRFLRWWLLAEESWHSTPVGRLLFPVLLGFRLVLLAASGP 60
Query: 61 GVYGDEQSEFVCHTQQPGCKAACFDAFHPLSPLRFWVFQVILVAVPSVLYMGYTPWESGV 120
GVYGDEQSEFVCHTQQPGCKAACFDAFHPLSPLRFWVFQVILVAVPSVLYMGYTPWESGV
Sbjct: 61 GVYGDEQSEFVCHTQQPGCKAACFDAFHPLSPLRFWVFQVILVAVPSVLYMGYTPWESGV 120
Query: 121 FQYREPPRCGPSEVLERAPRPPAPATLPAFVGRSDGGLRLSVLFVAVTAVCSCQRLASKM 180
FQYREPPRCGPSEVLERAPRPPAPATLPAFVGRSDGGLRLSVLFVAVTAVCSCQRLASKM
Sbjct: 121 FQYREPPRCGPSEVLERAPRPPAPATLPAFVGRSDGGLRLSVLFVAVTAVCSCQRLASKM 180
Query: 181 YYGNLDIYELPCNGKVVTATSRVPAKFYPEWNKLLIVPFPGF 222
YYGNLDIYELPCNGKVVTATSRVPAKFYPEWNKLLIVPFPGF
Sbjct: 181 YYGNLDIYELPCNGKVVTATSRVPAKFYPEWNKLLIVPFPGF 222
>gi|31559821 gap junction protein, gamma 3, 30.2kDa [Homo sapiens]
Length = 279
Score = 180 bits (456), Expect = 1e-45
Identities = 89/96 (92%), Positives = 90/96 (93%), Gaps = 1/96 (1%)
Query: 19 MCGRFLRWWLLAEESWHSTPVGRLLFPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPG 78
MCGRFLR LLAEES STPVGRLL PVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPG
Sbjct: 1 MCGRFLRR-LLAEESRRSTPVGRLLLPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPG 59
Query: 79 CKAACFDAFHPLSPLRFWVFQVILVAVPSVLYMGYT 114
CKAACFDAFHPLSPLRFWVFQVILVAVPS LYMG+T
Sbjct: 60 CKAACFDAFHPLSPLRFWVFQVILVAVPSALYMGFT 95
>gi|122939172 connexin 45 [Homo sapiens]
Length = 396
Score = 112 bits (280), Expect = 3e-25
Identities = 52/86 (60%), Positives = 66/86 (76%)
Query: 28 LLAEESWHSTPVGRLLFPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAF 87
LL E HST VG++ VL+ FR+VL A G +Y DEQS+FVC+T+QPGC+ C+DAF
Sbjct: 9 LLEEIHNHSTFVGKIWLTVLIVFRIVLTAVGGESIYYDEQSKFVCNTEQPGCENVCYDAF 68
Query: 88 HPLSPLRFWVFQVILVAVPSVLYMGY 113
PLS +RFWVFQ+ILVA PSV+Y+GY
Sbjct: 69 APLSHVRFWVFQIILVATPSVMYLGY 94
>gi|69122473 connexin 45 [Homo sapiens]
Length = 396
Score = 112 bits (280), Expect = 3e-25
Identities = 52/86 (60%), Positives = 66/86 (76%)
Query: 28 LLAEESWHSTPVGRLLFPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAF 87
LL E HST VG++ VL+ FR+VL A G +Y DEQS+FVC+T+QPGC+ C+DAF
Sbjct: 9 LLEEIHNHSTFVGKIWLTVLIVFRIVLTAVGGESIYYDEQSKFVCNTEQPGCENVCYDAF 68
Query: 88 HPLSPLRFWVFQVILVAVPSVLYMGY 113
PLS +RFWVFQ+ILVA PSV+Y+GY
Sbjct: 69 APLSHVRFWVFQIILVATPSVMYLGY 94
>gi|45439367 gap junction protein, gamma 2, 47kDa [Homo sapiens]
Length = 439
Score = 106 bits (264), Expect = 2e-23
Identities = 58/129 (44%), Positives = 77/129 (59%), Gaps = 12/129 (9%)
Query: 28 LLAEESWHSTPVGRLLFPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAF 87
LL E HST VG++ VL+ FR+VL A G +Y DEQ++F C+T+QPGC C+DAF
Sbjct: 12 LLEEIHNHSTFVGKVWLTVLVVFRIVLTAVGGEAIYSDEQAKFTCNTRQPGCDNVCYDAF 71
Query: 88 HPLSPLRFWVFQVILVAVPSVLYMGYTPWESGVFQYREPPRC-----GPSEVLERAPR-- 140
PLS +RFWVFQ+++++ PSV+Y+GY +E R GP RAPR
Sbjct: 72 APLSHVRFWVFQIVVISTPSVMYLGYAVHRLARASEQERRRALRRRPGP----RRAPRAH 127
Query: 141 -PPAPATLP 148
PP A P
Sbjct: 128 LPPPHAGWP 136
>gi|55953076 connexin 50 [Homo sapiens]
Length = 433
Score = 96.3 bits (238), Expect = 2e-20
Identities = 41/86 (47%), Positives = 62/86 (72%)
Query: 28 LLAEESWHSTPVGRLLFPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAF 87
+L E + HST +GR+ VL FR+++L + V+GDEQS+FVC+TQQPGC+ C+D
Sbjct: 10 ILEEVNEHSTVIGRVWLTVLFIFRILILGTAAEFVWGDEQSDFVCNTQQPGCENVCYDEA 69
Query: 88 HPLSPLRFWVFQVILVAVPSVLYMGY 113
P+S +R WV Q+I V+ PS++Y+G+
Sbjct: 70 FPISHIRLWVLQIIFVSTPSLMYVGH 95
>gi|22779877 connexin 46 [Homo sapiens]
Length = 435
Score = 94.4 bits (233), Expect = 7e-20
Identities = 39/86 (45%), Positives = 60/86 (69%)
Query: 28 LLAEESWHSTPVGRLLFPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAF 87
LL HST +G++ VL FR+++L A+ V+GDEQS+F C+TQQPGC+ C+D
Sbjct: 10 LLENAQEHSTVIGKVWLTVLFIFRILVLGAAAEDVWGDEQSDFTCNTQQPGCENVCYDRA 69
Query: 88 HPLSPLRFWVFQVILVAVPSVLYMGY 113
P+S +RFW Q+I V+ P+++Y+G+
Sbjct: 70 FPISHIRFWALQIIFVSTPTLIYLGH 95
>gi|10190698 gap junction protein, delta 2, 36kDa [Homo sapiens]
Length = 321
Score = 94.0 bits (232), Expect = 9e-20
Identities = 40/84 (47%), Positives = 61/84 (72%)
Query: 35 HSTPVGRLLFPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAFHPLSPLR 94
HST +GR+L V++ FR++++A G VY DEQ+ FVC+T QPGC AC+D P+S +R
Sbjct: 18 HSTMIGRILLTVVVIFRILIVAIVGETVYDDEQTMFVCNTLQPGCNQACYDRAFPISHIR 77
Query: 95 FWVFQVILVAVPSVLYMGYTPWES 118
+WVFQ+I+V PS+ ++ Y+ +S
Sbjct: 78 YWVFQIIMVCTPSLCFITYSVHQS 101
>gi|31542845 gap junction protein, alpha 9, 59kDa [Homo sapiens]
Length = 515
Score = 90.9 bits (224), Expect = 8e-19
Identities = 39/94 (41%), Positives = 62/94 (65%)
Query: 29 LAEESWHSTPVGRLLFPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAFH 88
L E HST +G++ +L FR+++L + V+ DEQS F+C+T+QPGC+ C+D
Sbjct: 11 LEEVHIHSTMIGKIWLTILFIFRMLVLGVAAEDVWNDEQSGFICNTEQPGCRNVCYDQAF 70
Query: 89 PLSPLRFWVFQVILVAVPSVLYMGYTPWESGVFQ 122
P+S +R+WV QVI V+ PS++YMG+ + V +
Sbjct: 71 PISLIRYWVLQVIFVSSPSLVYMGHALYRLRVLE 104
>gi|62865885 connexin 37 [Homo sapiens]
Length = 333
Score = 90.1 bits (222), Expect = 1e-18
Identities = 38/86 (44%), Positives = 59/86 (68%)
Query: 28 LLAEESWHSTPVGRLLFPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAF 87
LL + HST VG++ VL FR+++L +G V+GDEQS+F C+T QPGC C+D
Sbjct: 10 LLDQVQEHSTVVGKIWLTVLFIFRILILGLAGESVWGDEQSDFECNTAQPGCTNVCYDQA 69
Query: 88 HPLSPLRFWVFQVILVAVPSVLYMGY 113
P+S +R+WV Q + V+ P+++Y+G+
Sbjct: 70 FPISHIRYWVLQFLFVSTPTLVYLGH 95
>gi|14211941 gap junction protein, alpha 10 [Homo sapiens]
Length = 543
Score = 89.7 bits (221), Expect = 2e-18
Identities = 40/95 (42%), Positives = 61/95 (64%)
Query: 28 LLAEESWHSTPVGRLLFPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAF 87
+L E HST VG++ +L FR+++L + V+ DEQS F C+T+QPGC C+D
Sbjct: 10 ILEEVHSHSTIVGKIWLTILFIFRMLVLRVAAEDVWDDEQSAFACNTRQPGCNNICYDDA 69
Query: 88 HPLSPLRFWVFQVILVAVPSVLYMGYTPWESGVFQ 122
P+S +RFWV Q+I V+ PS++YMG+ + F+
Sbjct: 70 FPISLIRFWVLQIIFVSSPSLVYMGHALYRLRAFE 104
>gi|32483412 connexin 40 [Homo sapiens]
Length = 358
Score = 87.0 bits (214), Expect = 1e-17
Identities = 38/85 (44%), Positives = 57/85 (67%)
Query: 29 LAEESWHSTPVGRLLFPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAFH 88
L E HST VG++ VL FR+++L + +GDEQ++F C T QPGC+ C+D
Sbjct: 11 LEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPGCQNVCYDQAF 70
Query: 89 PLSPLRFWVFQVILVAVPSVLYMGY 113
P+S +R+WV Q+I V+ PS++YMG+
Sbjct: 71 PISHIRYWVLQIIFVSTPSLVYMGH 95
>gi|6631083 connexin 40 [Homo sapiens]
Length = 358
Score = 87.0 bits (214), Expect = 1e-17
Identities = 38/85 (44%), Positives = 57/85 (67%)
Query: 29 LAEESWHSTPVGRLLFPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAFH 88
L E HST VG++ VL FR+++L + +GDEQ++F C T QPGC+ C+D
Sbjct: 11 LEEVHKHSTVVGKVWLTVLFIFRMLVLGTAAESSWGDEQADFRCDTIQPGCQNVCYDQAF 70
Query: 89 PLSPLRFWVFQVILVAVPSVLYMGY 113
P+S +R+WV Q+I V+ PS++YMG+
Sbjct: 71 PISHIRYWVLQIIFVSTPSLVYMGH 95
>gi|148839378 gap junction protein, delta 3, 31.9kDa [Homo sapiens]
Length = 294
Score = 86.7 bits (213), Expect = 1e-17
Identities = 41/92 (44%), Positives = 59/92 (64%)
Query: 28 LLAEESWHSTPVGRLLFPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAF 87
LL S VGRL V+L FR+++LA G V+ DEQ EFVC+T QPGC+ C+D
Sbjct: 10 LLDAVQLQSPLVGRLWLVVMLIFRILVLATVGGAVFEDEQEEFVCNTLQPGCRQTCYDRA 69
Query: 88 HPLSPLRFWVFQVILVAVPSVLYMGYTPWESG 119
P+S RFW+F ++L++ P VL++ Y+ +G
Sbjct: 70 FPVSHYRFWLFHILLLSAPPVLFVVYSMHRAG 101
>gi|4504001 connexin 43 [Homo sapiens]
Length = 382
Score = 85.9 bits (211), Expect = 3e-17
Identities = 39/86 (45%), Positives = 58/86 (67%)
Query: 28 LLAEESWHSTPVGRLLFPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAF 87
LL + +ST G++ VL FR++LL + +GDEQS F C+TQQPGC+ C+D
Sbjct: 10 LLDKVQAYSTAGGKVWLSVLFIFRILLLGTAVESAWGDEQSAFRCNTQQPGCENVCYDKS 69
Query: 88 HPLSPLRFWVFQVILVAVPSVLYMGY 113
P+S +RFWV Q+I V+VP++LY+ +
Sbjct: 70 FPISHVRFWVLQIIFVSVPTLLYLAH 95
>gi|148233402 gap junction protein, beta 1, 32kDa [Homo sapiens]
Length = 283
Score = 85.5 bits (210), Expect = 3e-17
Identities = 36/82 (43%), Positives = 57/82 (69%)
Query: 28 LLAEESWHSTPVGRLLFPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAF 87
LL+ + HST +GR+ V+ FR+++L + V+GDE+S F+C+T QPGC + C+D F
Sbjct: 9 LLSGVNRHSTAIGRVWLSVIFIFRIMVLVVAAESVWGDEKSSFICNTLQPGCNSVCYDQF 68
Query: 88 HPLSPLRFWVFQVILVAVPSVL 109
P+S +R W Q+ILV+ P++L
Sbjct: 69 FPISHVRLWSLQLILVSTPALL 90
>gi|4504005 gap junction protein, beta 1, 32kDa [Homo sapiens]
Length = 283
Score = 85.5 bits (210), Expect = 3e-17
Identities = 36/82 (43%), Positives = 57/82 (69%)
Query: 28 LLAEESWHSTPVGRLLFPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAF 87
LL+ + HST +GR+ V+ FR+++L + V+GDE+S F+C+T QPGC + C+D F
Sbjct: 9 LLSGVNRHSTAIGRVWLSVIFIFRIMVLVVAAESVWGDEKSSFICNTLQPGCNSVCYDQF 68
Query: 88 HPLSPLRFWVFQVILVAVPSVL 109
P+S +R W Q+ILV+ P++L
Sbjct: 69 FPISHVRLWSLQLILVSTPALL 90
>gi|145699105 connexin40.1 [Homo sapiens]
Length = 370
Score = 84.7 bits (208), Expect = 6e-17
Identities = 46/127 (36%), Positives = 67/127 (52%), Gaps = 4/127 (3%)
Query: 19 MCGRFLRWWLLAEESWHSTPVGRLLFPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPG 78
M G L +L+ + + T VG+L F + + R++++ +G VY DEQ FVC+T QPG
Sbjct: 1 MEGVDLLGFLIITLNCNVTMVGKLWFVLTMLLRMLVIVLAGRPVYQDEQERFVCNTLQPG 60
Query: 79 CKAACFDAFHPLSPLRFWVFQVILVAVPSVLYMGYTPWESGVFQYREPPRC----GPSEV 134
C C+D F P+S LRFW+ Q + V +PS ++ Y P RC P+
Sbjct: 61 CANVCYDVFSPVSHLRFWLIQGVCVLLPSAVFSVYVLHRGATLAALGPRRCPDPREPASG 120
Query: 135 LERAPRP 141
R PRP
Sbjct: 121 QRRCPRP 127
>gi|42558283 gap junction protein beta 2 [Homo sapiens]
Length = 226
Score = 84.3 bits (207), Expect = 7e-17
Identities = 34/75 (45%), Positives = 53/75 (70%)
Query: 35 HSTPVGRLLFPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAFHPLSPLR 94
HST +G++ VL FR+++L + V+GDEQ++FVC+T QPGCK C+D + P+S +R
Sbjct: 16 HSTSIGKIWLTVLFIFRIMILVVAAKEVWGDEQADFVCNTLQPGCKNVCYDHYFPISHIR 75
Query: 95 FWVFQVILVAVPSVL 109
W Q+I V+ P++L
Sbjct: 76 LWALQLIFVSTPALL 90
>gi|159032020 gap junction protein, beta 6 [Homo sapiens]
Length = 261
Score = 83.2 bits (204), Expect = 2e-16
Identities = 34/75 (45%), Positives = 52/75 (69%)
Query: 35 HSTPVGRLLFPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAFHPLSPLR 94
HST +G++ V+ FR+++L + V+GDEQ +FVC+T QPGCK C+D F P+S +R
Sbjct: 16 HSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGCKNVCYDHFFPVSHIR 75
Query: 95 FWVFQVILVAVPSVL 109
W Q+I V+ P++L
Sbjct: 76 LWALQLIFVSTPALL 90
>gi|158966714 gap junction protein, beta 6 [Homo sapiens]
Length = 261
Score = 83.2 bits (204), Expect = 2e-16
Identities = 34/75 (45%), Positives = 52/75 (69%)
Query: 35 HSTPVGRLLFPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAFHPLSPLR 94
HST +G++ V+ FR+++L + V+GDEQ +FVC+T QPGCK C+D F P+S +R
Sbjct: 16 HSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGCKNVCYDHFFPVSHIR 75
Query: 95 FWVFQVILVAVPSVL 109
W Q+I V+ P++L
Sbjct: 76 LWALQLIFVSTPALL 90
>gi|158966717 gap junction protein, beta 6 [Homo sapiens]
Length = 261
Score = 83.2 bits (204), Expect = 2e-16
Identities = 34/75 (45%), Positives = 52/75 (69%)
Query: 35 HSTPVGRLLFPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAFHPLSPLR 94
HST +G++ V+ FR+++L + V+GDEQ +FVC+T QPGCK C+D F P+S +R
Sbjct: 16 HSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGCKNVCYDHFFPVSHIR 75
Query: 95 FWVFQVILVAVPSVL 109
W Q+I V+ P++L
Sbjct: 76 LWALQLIFVSTPALL 90
>gi|40254837 gap junction protein, beta 6 [Homo sapiens]
Length = 261
Score = 83.2 bits (204), Expect = 2e-16
Identities = 34/75 (45%), Positives = 52/75 (69%)
Query: 35 HSTPVGRLLFPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAFHPLSPLR 94
HST +G++ V+ FR+++L + V+GDEQ +FVC+T QPGCK C+D F P+S +R
Sbjct: 16 HSTSIGKVWITVIFIFRVMILVVAAQEVWGDEQEDFVCNTLQPGCKNVCYDHFFPVSHIR 75
Query: 95 FWVFQVILVAVPSVL 109
W Q+I V+ P++L
Sbjct: 76 LWALQLIFVSTPALL 90
>gi|38348412 gap junction protein, beta 7, 25kDa [Homo sapiens]
Length = 223
Score = 78.2 bits (191), Expect = 5e-15
Identities = 36/92 (39%), Positives = 57/92 (61%)
Query: 28 LLAEESWHSTPVGRLLFPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAF 87
LL+ + +ST G + V+ FRL++ + V+ DEQ EF C+++QPGCK CFD F
Sbjct: 9 LLSGVNKYSTGTGWIWLAVVFVFRLLVYMVAAEHVWKDEQKEFECNSRQPGCKNVCFDDF 68
Query: 88 HPLSPLRFWVFQVILVAVPSVLYMGYTPWESG 119
P+S +R W Q+I+V+ PS+L + + + G
Sbjct: 69 FPISQVRLWALQLIMVSTPSLLVVLHVAYHEG 100
>gi|54607056 connexin 31 [Homo sapiens]
Length = 270
Score = 75.9 bits (185), Expect = 3e-14
Identities = 46/137 (33%), Positives = 69/137 (50%), Gaps = 12/137 (8%)
Query: 28 LLAEESWHSTPVGRLLFPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAF 87
LL+ + +ST GR+ V+ FR+++ + V+GDEQ +F C+T+QPGC C+D +
Sbjct: 9 LLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGCTNVCYDNY 68
Query: 88 HPLSPLRFWVFQVILVAVPSVLYMGYTPWESGVFQYREPPRCGPSEVLERAPRPPAPATL 147
P+S +R W Q+I V PS+L + + YRE E R A L
Sbjct: 69 FPISNIRLWALQLIFVTCPSLLVILHV-------AYRE-----ERERRHRQKHGDQCAKL 116
Query: 148 PAFVGRSDGGLRLSVLF 164
G+ GGL + LF
Sbjct: 117 YDNAGKKHGGLWWTYLF 133
>gi|13128960 connexin 31 [Homo sapiens]
Length = 270
Score = 75.9 bits (185), Expect = 3e-14
Identities = 46/137 (33%), Positives = 69/137 (50%), Gaps = 12/137 (8%)
Query: 28 LLAEESWHSTPVGRLLFPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAF 87
LL+ + +ST GR+ V+ FR+++ + V+GDEQ +F C+T+QPGC C+D +
Sbjct: 9 LLSGVNKYSTAFGRIWLSVVFVFRVLVYVVAAERVWGDEQKDFDCNTKQPGCTNVCYDNY 68
Query: 88 HPLSPLRFWVFQVILVAVPSVLYMGYTPWESGVFQYREPPRCGPSEVLERAPRPPAPATL 147
P+S +R W Q+I V PS+L + + YRE E R A L
Sbjct: 69 FPISNIRLWALQLIFVTCPSLLVILHV-------AYRE-----ERERRHRQKHGDQCAKL 116
Query: 148 PAFVGRSDGGLRLSVLF 164
G+ GGL + LF
Sbjct: 117 YDNAGKKHGGLWWTYLF 133
>gi|23397464 gap junction protein, beta 4 [Homo sapiens]
Length = 266
Score = 75.5 bits (184), Expect = 3e-14
Identities = 34/82 (41%), Positives = 53/82 (64%)
Query: 28 LLAEESWHSTPVGRLLFPVLLGFRLVLLAASGPGVYGDEQSEFVCHTQQPGCKAACFDAF 87
LL+ + +ST + R+ V+ FR+++ + V+ DEQ +FVC+T+QPGC C+D F
Sbjct: 9 LLSGVNKYSTVLSRIWLSVVFIFRVLVYVVAAEEVWDDEQKDFVCNTKQPGCPNVCYDEF 68
Query: 88 HPLSPLRFWVFQVILVAVPSVL 109
P+S +R W Q+ILV PS+L
Sbjct: 69 FPVSHVRLWALQLILVTCPSLL 90
Database: hs.faa
Posted date: Aug 4, 2009 4:42 PM
Number of letters in database: 18,247,518
Number of sequences in database: 37,866
Lambda K H
0.326 0.142 0.478
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,426,995
Number of Sequences: 37866
Number of extensions: 518092
Number of successful extensions: 2132
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2080
Number of HSP's gapped (non-prelim): 59
length of query: 222
length of database: 18,247,518
effective HSP length: 98
effective length of query: 124
effective length of database: 14,536,650
effective search space: 1802544600
effective search space used: 1802544600
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)
Search results were obtained with NCBI BLAST and RefSeq entries.
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Guide to the Human Genome
Copyright © 2010 by Stewart Scherer. All rights reserved.